These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9145#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1425 fasta sequence [CAAGAATCGGCCGAGGCTNACCCACGCGTGTACTGTAGGCTTCGGGTAATTCGGTTCATTTCCATAAACGTGAACGTACTAGTTCTTTCAATTATATGAACTGAACGTCGCGAATCGCGATTCATTCGTTCATTTCAGTTTATCAAAAAAAAATTGGTTTAATGCATGCAAAATGGTTTAATTTTGCAAGAGAAATTACTCTATTACATTTTGAAAATTATTTGGCAGACCATCTTTAATTCGACGTGTAGGATGTTCTTTTCGTGAACGATCTGGTCATACGGTTCACGTTCATATTTGTATTGGATGAGATGAACGACCTCGGCGTACTAGGACGTTCTGCTATTCGACGGGGTANGGGAATTAACGAGTTCACGGTTTCCATTAATTTTGGTTAACTGGGGGCAGAAAAAAAGTTGGAAAACCGAAACCCTGGGGCCTTTTTGGTTATTGGACCGGTTTCCTCTATTATTTCGGAGTGGGCAATACNGGGGTCCCGGTTTCANTNTTTCGTTGAAACGGTTNCCCCCTTTGGGGGGAAACCCANNTTAGCCAGGGGGTATATCCANCCACAGGAGGGGGTTGGGGGCGCCCACATTTCCGGGAAAATTTCNCAACGGGAACAACTTATTCTGTGGTGACAANCAAGTTGTTGTTTCCCCCGGGGAATGNAAGTCAGAAGTNTATGTGTTAGGCGCTTATTCGGCAACAANTTGGACACATTTNGAAGAACAACGTTTTTGTNNGTGATCTATGACAGGTCGTNTAACACGGCCCTTACTGGCTTTGGTTTGGAACACCGGGGGGGGCCCGCACATTTTTTGGCGCGGGGGGGCACAAGAGGGGAATTTGGGGAAGAAGACCGAGGNGCGTGCCAAATTAGGAGAACAAGTTTTGAAGCGTTCCCGAAGTTTACAAAAANTAGTAAGACCANANTGTGGGGGGAACACTTTCAACAAACAACACAAACGGGGTTCTTTCACTATTTTTCANACGAGTTTNTGCAAAAAACAACTTTGTGCAACATATTTTTCTTTCAAAGAACCCCCCAAAAGTTCTAATCTTTCACAAACGTTCAGGGTGTCCCCCTTCTACACAAGCAGTTTTCACCCTCTTTTGGGGCACAATTTTTGGGGGGGAAACNGGGTTTTAGTGGGTCNACCCCANAAGAGCCCNGAAGCCACACGTATGGTTNTGCATGNGGGNAACAGGAAGAAAACGCCCCCGCANAGTNTGAGTGAATGAATACTAGTAATGNGGGGGCGGCCCCANACTTTTGTGGGGACAACGCANATCAGTGTAGTCGGGTGGCGTGTGAACAGAGTCTGCCCTCGCCCGCCAGCAGGCGACNCACGTTGCTGTGTTCCTACGNGGGGTAGATGGTNATAAGACGCCGCACACCAGCAGAGAGAAGGANCCAGGCCC] [+] EMBL BX468559 [CAAGAATCGGCCGAGGCTNACCCACGCGTGTACTGTAGGCTTCGGGTAATTCGGTTCATTTCCATAAACGTGAACGTACTAGTTCTTTCAATTATATGAACTGAACGTCGCGAATCGCGATTCATTCGTTCATTTCAGTTTATCAAAAAAAAATTGGTTTAATGCATGCAAAATGGTTTAATTTTGCAAGAGAAATTACTCTATTACATTTTGAAAATTATTTGGCAGACCATCTTTAATTCGACGTGTAGGATGTTCTTTTCGTGAACGATCTGGTCATACGGTTCACGTTCATATTTGTATTGGATGAGATGAACGACCTCGGCGTACTAGGACGTTCTGCTATTCGACGGGGTANGGGAATTAACGAGTTCACGGTTTCCATTAATTTTGGTTAACTGGGGGCAGAAAAAAAGTTGGAAAACCGAAACCCTGGGGCCTTTTTGGTTATTGGACCGGTTTCCTCTATTATTTCGGAGTGGGCAATACNGGGGTCCCGGTTTCANTNTTTCGTTGAAACGGTTNCCCCCTTTGGGGGGAAACCCANNTTAGCCAGGGGGTATATCCANCCACAGGAGGGGGTTGGGGGCGCCCACATTTCCGGGAAAATTTCNCAACGGGAACAACTTATTCTGTGGTGACAANCAAGTTGTTGTTTCCCCCGGGGAATGNAAGTCAGAAGTNTATGTGTTAGGCGCTTATTCGGCAACAANTTGGACACATTTNGAAGAACAACGTTTTTGTNNGTGATCTATGACAGGTCGTNTAACACGGCCCTTACTGGCTTTGGTTTGGAACACCGGGGGGGGCCCGCACATTTTTTGGCGCGGGGGGGCACAAGAGGGGAATTTGGGGAAGAAGACCGAGGNGCGTGCCAAATTAGGAGAACAAGTTTTGAAGCGTTCCCGAAGTTTACAAAAANTAGTAAGACCANANTGTGGGGGGAACACTTTCAACAAACAACACAAACGGGGTTCTTTCACTATTTTTCANACGAGTTTNTGCAAAAAACAACTTTGTGCAACATATTTTTCTTTCAAAGAACCCCCCAAAAGTTCTAATCTTTCACAAACGTTCAGGGTGTCCCCCTTCTACACAAGCAGTTTTCACCCTCTTTTGGGGCACAATTTTTGGGGGGGAAACNGGGTTTTAGTGGGTCNACCCCANAAGAGCCCNGAAGCCACACGTATGGTTNTGCATGNGGGNAACAGGAAGAAAACGCCCCCGCANAGTNTGAGTGAATGAATACTAGTAATGNGGGGGCGGCCCCANACTTTTGTGGGGACAACGCANATCAGTGTAGTCGGGTGGCGTGTGAACAGAGTCTGCCCTCGCCCGCCAGCAGGCGACNCACGTTGCTGTGTTCCTACGNGGGGTAGATGGTNATAAGACGCCGCACACCAGCAGAGAGAAGGANCCAGGCCC] consensusID : consensus_9145#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1124 fasta sequence [TTTTTTCGCTTTTCACGTTTATGGAAATGAACCGAATTACCCAAGCCTACAGTACACGCGTGGGTGAGTTTTTATTTTAATTTCTAAACGTGTTTAAGTCCAAGTAGTAATTTTAATTCACTGTTTGGATGATGCTCAGATGCTGCTTCTACTCGCTGACAGCAACAAATGACCTCGCAATCCTCGCTCGTGGAGTATTT--AAAAAAAAACACACACACAGACATAATAGGGTGCGCGTGCGGTACACGGGCACTTGCCAGCTCGTAACGTAACGCTCTTAAATCTAACACCGCCATCTGACCCCTTACTCTAACCCGCCTGGCGCCTACTTGCGACCGACGCGGACAGCACCTGGCGCA-CGAGCGGGACGCCAGGTCGAGCGGCGTCTTTTCGTACCGGTTCTGCAGCTCCAGGTT-GCGCCGCCCCGCACCAGCTCGAGCGCACACTCCTGCTTGTCCTCCTCGCAGGCCATGTGCAGGGGCGTGTTGCCCTCGCTGTTCGGTATGTTTT-GG-TGGCG-CCCGCCTC-GATCAGCAGCCCGATCAGCTCGGTCGACCCGATGGCGGTGGCCCGGTGCAGCGGCGTCTCGTTCAGGTAGTCCACCACGTCCACGTTCGCGCCGAGCTGCACCAGGTGCCGTGCGATGGC-GGGCTGGTTCTTCGAGCAGGCGTACTGCAGCGCCGAATGGCCTCG-CCTG-TGCGCTGGTGCACGTTGGCGCCGCGAAACG-TCAGCATGGTGACGATTGCCGGATGGCGACCGAGCGTGGCCAGTATTAGCGGCGTCAGCCCGGCATCGTCCTCCGCGTTCAGCTGGTCCGGGTGCCGCTCGAGGATGGACTCGACGAGCCGCTCCTGGCCGACGAGTGCCGCCCAGTGGATGAGCAGCCGTTCGCTCTCG-TCCCGCTCGGTAATGTGGCTCGGGCAGCGCATCAGCGTCGCCTGTATTTCGTTCTCCGACTT-CCGGG-CCAG-CTCGTAGAAAAACGTGCTCTTGCTGCTCATGCTGTGCGTAGTTGGTTTGTTGGTTGGGCTGGAGTTGTGAGGATTTCAGCTTCAGTTACGACTCCAGCTACGATGAGACGGCTATTTGCCTGTGTTGCTCGTTGGTGTACAACCACCATCGACGATGCG] [+] EMBL CNS08PNK [TTTTTTCGCTTTTCACGTTTATGGAAATGAACCGAATTACCCAAGCCTACAGTACACGCGTGGGTGAGTTTTTATTTTAATTTCTAAACGTGTTTAAGTCCAAGTAGTAATTTTAATTCACTGTTTGGATGATGCTCAGATGCTGCTTCTACTCGCTGACAGCAACAAATGACCTCGCAATCCTCGCTCGTGGAGTATTT AAAAAAAAAC ] [+] EMBL CNS08PIF [ acacAATT CCCAAGCCTACAGTACACGCGTGGGTGAGTTTTTATTTTAATTTCTAAACGTGTTTAAGTTCAAGTAGTAATTTTAATTCACTGTTTGGATGATGCTCAGATGCTGCTTCTACTCGCTGACAGCAACAAATGACCTCGCAATCCTCGCTCGTGGAGTATTTAAAAAAAAAAACACACACACAGACATAATAGGGTGCGCGTGCGGTACACGGGCACTTGCCAGCTCGTAACGTAACGCTCTTAAATCTAACACCGCCATCTGACCCCTTACTCTAACCCGCCTGGCGCCTACTTGCGACCGACGCGGACAGCACCTGGCGCA GGAGCGGGACGCCAGGTCGAGCGGCGTCTTTTCGTACCGGTTCTGCAGCTCCAGGTTGGCGCCGCCCCGCACCAGCTCGAGCGCACACTCCTGCTTGTCCTCCTCGCAGGCCATGTGCAGGGGCGTGTTGCCCTCGCTGTTCGGTATGTTCG GGCTGGCGCCCCGCCTC GATCAGCAGCCCGATCAGCTCGGTCGACCCGATGGCGGTGGCCCGGTGCAGCGGCGTCTCGTTCAGGTAGTCCACCACGTCCACGTTCGCGCCGAGCTGCACCAGGTGCCGTGCGATGGC GGGCTGGTTCTTCGAGCAGGCGTACTGCAGCGCCGAATGGCCTCG CCTGCTGCGCTGGTGCACGTTGGCGCCGCGAAACG TCAGCATGGTGACGATTGCCGGATGGCGACCGAGCGTGGCCAGTATTAGCGGCGTCACCCGGGCATCGTCCTCCGCGTTCAGCTGGTCCGGGTGCCGCTCGAGGA ] [+] EMBL CNS08LFB [ GACAGCAACAAATGACCTCGCAATCCTCGCTCGTGGAGTATTT AAAAAAAAACACACACACAGACATAATAGGGTGCGCGTGCGGGACACGGGCACTTGCCAGCCCGTAACGTAACGCTCTTAAATCTAACACCGCCATCTGACCCCTTACTCTAACCCGCCTGGCGCCTACTTGCGACCGACGCGGACAGCACCTGGCGCA CGAGCGGGACGCCAGGgc ] [-] EMBL CNS08PNJ [ TCGCAATCCTCGCTCGTGGAGTATTT AAAAAAAAACACACACACAGACATAATAGGGTGCGCGTGCGGTACACGGGCACTTGCCAGCTCGTAACGTAACGCTCTTAAATCTAACACCGCCATCTGACCCCTTACTCTAACCCGCCTGGCGCCTACTTGCGACCGACGCGGACAGCACCTGGCGCAGCGAGCGGGACGCCAGGTCGAGCGGCGTCTTTTCGTACCGGTTCTGCAGCTCCAGGTT GCGCCGCCCCGCACCAGCTCGAGCGCACACTCCTGCTTGTCCTCCTCGCAGGCCATGTGCAGGGGCGTGTTGCCCTCGCTGTTCGGTATGTTTTCGG TAAAG CCCGCCTC GATCAGCAGCCCGATCAGCTCGGTCGACCCGATGGCGGTGGCCCGGTGCAGCGGCGTCTCGTTCAGGTAGTCCACCACGTCCACGTTCGCGCCGAGCTGCACCAGGTGCCGTGCGATGGC GGGCTGGTTCTTCGAGCAGGCGTACTGCAGCGCCGAATGGCCTCG CCTG TGCGCTGGTGCACGTTGGCGCCGCGAAACG TCAGCATGGTGACGATTGCCGGATGGCGACCGAGCGTGGCCAGTATTAGCGGCGTCAGCCCGGCATCGTCCTCCGCGTTCAGCTGGTCCGGGTGCCGCTCGAGGATGGACTCGACGAGCCGCTCCTGGCCGACGAGTGCCGCCCAGTGGATGAGCAGCCGTTCGCTCTCG TCCCGCTCGGTAATGTGGCTCGGGCAGCGCATCAGCGTCGCCTGTATTTCGTTCTCCGACTT CCGGG CCAG CTCGTAGAAAAACGTGCTCTTGCTGCTCATGCTGTGCGTAGTTGGTTTGTTGGTTGGGCTGGAGTTGTGAGGATTTCAGCTTCAGTTACGACTCCAGCTACGATGAGACGGCTATTTGCCTGTGTTGCTCGTTGGT TACAGCGCCCAT ] [-] EMBL CNS08PIE [ CTAACACCGCCATCTGACCCCTTACTCTAACCCGCCTGGCGCCTACTTGCGACCGACGCGGACAGCACCTGGCGCAGCGAGCGGGACGCCAGGTCGAGCGGCGTCTTTTCGTACCGGTTTTGCAGCTCCAGGTT GCGCCGCCCCGCACCAGCTCGAGCGCACACTCCTGCTTGTCCTCCTCGCAGGCCATGTGCAGGGGCGTGTTGCCCTCGCTGTTCGGTATGATTT GG TGGCG CCCGCCTC GATCAGCAGCCCGATCAGCTCGGTCGACCCGATGGCGGTGGCCCGGTGCAGCGGCGTCTCGTTCAGGTAGTCCACCACGTCCACGTTCGCGCCGAGCTGCACCAGGTGCCGTGCGATGGCTGGGCTGGTTCTTCGAGCAGGCGTACTGCAGCGCCGAATGGCCTCG CCTC TGCGCTGGTGCACGTTGGCGCCGCGAAACG TCAGCATGGTGACGATTGCCGGATGGCGACCGAGCGTGGCCAGTATTAGCGGCGTCAGCCCGGCATCGTCCTCCGCGTTCAGCTGGTCCGGGTGCCGCTCGAGGATGGACTCGACGAGCCGCTCCTGGCCGACGAGTGCCGCCCAGTGGATGAGCAGCCGTTCGCTCTCG TCCCGCTCGGTAATGTGGCTCGGGCAGCGCATCAGCGTCGCCTGTATTTCGTTCTCCGACTT CCGGG CCAGTCTCGTAGAAAAACGTGCTCTTGCTGCTCATCGTGCGCGTAGTTGGTTTGTTGGTTGGGCTGGAGTTGTGAGGATTTCAGCTTCAGTTACGACTCCAGCTACGATGAGACGcat ] [-] EMBL CNS08TZV [ GTTTTTTTGTACCGGTTCTGCAGCTCCAGGTT GCGCCGCCCCGCACCAGCTCGAGCGCACACTCCTGCTTGTCCTCCTCGCAGGCCATGTGCAGGGGCGTGTTGCCCTCGCTGTTCGGTATGATTT GG TGGCG CCCGCCTCGGATCAGCAGCCCGATCAGCTCGGTCGACCCGATGGCGGTGGCCCGGTGCAGCGGCGTCTCGTTCAGGTAGTCCACCACGTCCACGTTCGCGCCGAGCTGCACCAGGTGCCGTGCGATGGC GGGCTGGTTCTTCGAGCAGGCGTACTGCAGCGCCGAATGGCCTCG CCTG TGCGCTGGTGCACGTTGGCGCCGCGAAACG TCAGCATGGTGACGATTGCCGGATGGCGACCGAGCGTGGCCAGTATTAGCGGCGTCAGCCCGGCATCGTCCTCCGCGTTCAGCTGGTCCGGGTGCCGCTCGAGGATGGACTCGACGAGCCGCTCCTGGCCGACGAGTGCCGCCCAGTGGATGAGCAGCCGTTCGCTCTCG TCCCGCTCGGTAATGTGGCTCGGGCAGCGCATCAGCGTCGCCTGTATTTCGTTCTCCCACTC CCGGG CCAG CTCGTACAAAAACGTGCTCTTGCTGCTCATGCTGTGCGTAGTTGGTTTGTTGGTTGGGCTGGAGTTGTGAGGATTTCAGCTTCAGTTACAACTCCAGCTACGATGAGACGGCTATTTGCCTGTGTTGCTCGTTGGTGTACAACCACCATCGA ] [-] EMBL BM583773 [ AGCAGCCCGATCAGCTCGGTCGACCCGATGGCAGTGGCCCGGTGCAGCGGCGTCTCGTTCAGGTAGTCCACCACGTCCACGTTCGCGCCGAGCTGCACCAGGTGCCGGGCGATGGC GGGCTGGTTCTTCGAGCAGGCGTACTGCAGCGCCGAATGGCCCCG CCTGCTGCGCTGGTGCACGTTGGCGCCGCGAAACG TCAGCATGGTGACGATGGCCGGATGGCGACCGAGCGTGGCCAGTATTAGCGGCGTCAGCCCGGCATCGTCCTCCGCGTTCAGCTGGTCCGGGTGCCGCTCGAGGATGGACTCGACGAGCCGCTCCTGGCCGACGAGTGCCGCCCAGTGGATGAGCAGCCGTTCGCTCTCG TCCCGCTCCGTAATGTGGCTCGGGCAGCGCATCAGCGTCGCCTGTATTTCGTTCTCCGACTT CCGGG CCAG CTCGTAGAAAAACGTGCTCTTGCTGCTCATGCTGTGCGTAGTTGGTTTGTTGGTTGGGCTGGAGTTGTGAGGATTTCAGCTTCAGTTACGACTCCAGCTACGATGAGACGGCTATTTGCCTGTGTTGCTCGTTGGgtgcgg ] [-] EMBL CNS08LFA [ CGATCAGCTCGGTCGACCCGATGGCGGTGGCCCGGTGCAGCGGCGTCTCGTTCAGGTAGTCCACCACGTCCACGTTCGCGCCGAGCTGCACCAGGTGCCGTGCGATGGC GGGCTGGTTCTTCGAGCAGGCGTACTGCAGCGCCGAATGGCCTCGCCCTG TGCGCTGGTGCACGTTGGCGCCGCGAAACG TCAGCATGGTGACGATTGCCGGATGGCGACCGAGCGTGGCCAGTATTAGCGGCGTCAGCCCGGCATCGTCCTCCGCGTTCAGCTGGTCCGGGTGCCGCTCGAGGATGGACTCGACGAGCCGCTCCTGGCCGACGAGTGCCGCCCAGTGGATGAGCAGCCGTTCGCTCTCGATCCCGCTCGGTAATGTGGCTCGGGCAGCGCATCAGCGTCGCCTGTATTTCGTTCTCCGACTT CCGGG CCAG CTCGTAGAAAAACGTGCTCTTGCTGCTCATGCTGTGCGTAGTTGGTTTGTTGGTTGGGCTGGAGTTGTGAGGATTTCAGCTTCAGTTACGACTCCAGCTACGATGAGACGGCTATTTGCCTGTGTTGCTCGTTGGTGTACAACCACCATCGACGATGCG] [-] EMBL CNS08G0V [ CCGGTGCAGCGGCGTCTCGTTCAGGTAATCCACCACGTCCACGTTCGCGCCGAGCTGCACCAGGTGCCGTGCGATGGC GGGCTGGTTCTTCGAGCAGGCGTACTGCAGCGCCGAATGGCCTCG CCTG TGCGCTGGTGCACGTTGGCGCCGCGAAAGG TCAGCATGGTGACGATTGCCGGATGGCGACCGAGCGTGGCCAGTATTAGCGGCGTCAGCCCGGCATCGTCCTCCGCGTTCAGCTGGTCCGGGTGCCGCTCGAGGATGGACTCGACGAGCCGCTCCTGGCCGACGAGTGCCGCCCAGTGGATGAGCAGCCGTTCGCTCTCG TCCCGCTCGGTAATGTGGCTCGGGCAGCGCATCAGCGTCGCCTGTATTTCGTTCTCCGACTT CCGGG CCAG CTCGTAGAAAAACGTGCTCTTGCTGCTCATGCTGTGCGTAGTTGGTTTGTTGGTTGGGCTGGAGTTGTGAGGATTTCAGCTTCAGTTACGACTCCAGCTACGATGAGACGGCTATTTGCCTGT ] [-] EMBL CNS08FUE [ TGCACGTTGGCGCGGCG ACCGCACAGCATGGTGACGATTGCCGGATGGCGACCGAGCGTGGCCAGTATTAGCGGCGTCAGCCCGGCATCGTCCTCCGCGTTCAGCTGGTCCGGGTGCCGCTCGAGGATGGACTCGACGAGCCGCTCCTGGCCGACGAGTGCCGCCCAGTGGATGAGCAGCCGTTCGCTCTCG TCCCGCTCGGTAATGTGGCTCGGGCAGCGCATCAGCGTCGCCTGTATTTCGTTCTCCGACTTCCCGGGACCAG CTCGTAGAAAAACGTGCTCTTGCAACTCATG ] [-] EMBL CNS08ULE [ CCCGCTCGGTAATGTGGCTCGGGCAGCGCATCAGCGTCGCCTGTATTTCGTTCTCCGACTT CCGGG CCAG CTCGTAGAAAAACGTGCTCTTGCTGCTCATGCTGTGCGTAGTTGGTTTGTTGGTTG ] consensusID : consensus_9145#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 752 fasta sequence [GCACCCTATTATGTCTGTGTGTGTGCTTTTTTTTAAATACTCCACGAGCGAGGATTGCGAGGTCATTTGTTGCTGTCAGCGAGTAGAAGCAGCATCTGAGCATCATCCAAACAGTGAATTAAAATTACTACTTGAACTTAAACACGTTTAGAAATTAAAATAAAAACTCACCCACGCGTGTACTGTAGGCTTGGGTAATTCGGTTCATTTCCATAAACGTGAACGTACTAGTTCTTTCAATTATATGAACTGAACGTCGCGAATCGCGATTCATTCGTTCATTTCAGTTTATCAAAAAAAAATTGGTTTAATGCATGCAAAATGGTTTAATTTTGCAAGAGAAATTACTCTATTACATTTTGAAAATTATTTGGCAGACCATCTTTAATTCGACGTGTAGGATGTTCTTTTCGTGAACGATCTGGTCATACGGTTCACGTTCATATTTGTATTGGATGAGATGAACGACCTCGCGTACTAGGACGTTCTGCTATTCGACGGGTAGGATTACGATTCACGTTCATATTTGTATGGGAGAAAATGAACGACCTGGCTTTGTATGACGTTCTTTATTTCGATGGATAGGTCGTTCATTTCGTGAACGTCCTGGACATACGGTTCACAGGGTGGCCATTCGAATCAGAATTTTTAAAATCCGTTTTTTTTTTGCTTTTGAATGAATGAAACTTTTTTAGTTTACGCCTCGTGTGACGGGCATTGCGGCAAAGATGAACGCTCATAAATACTCATAA] [+] EMBL BX606495 [GCACCCTATTATGTCTGTGTGTGTGCTTTTTTTTAAATACTCCACGAGCGAGGATTGCGAGGTCATTTGTTGCTGTCAGCGAGTAGAAGCAGCATCTGAGCATCATCCAAACAGTGAATTAAAATTACTACTTGAACTTAAACACGTTTAGAAATTAAAATAAAAACTCACCCACGCGTGTACTGTAGGCTTGGGTAATTCGGTTCATTTCCATAAACGTGAACGTACTAGTTCTTTCAATTATATGAACTGAACGTCGCGAATCGCGATTCATTCGTTCATTTCAGTTTATCAAAAAAAAATTGGTTTAATGCATGCAAAATGGTTTAATTTTGCAAGAGAAATTACTCTATTACATTTTGAAAATTATTTGGCAGACCATCTTTAATTCGACGTGTAGGATGTTCTTTTCGTGAACGATCTGGTCATACGGTTCACGTTCATATTTGTATTGGATGAGATGAACGACCTCGCGTACTAGGACGTTCTGCTATTCGACGGGTAGGATTACGATTCACGTTCATATTTGTATGGGAGAAAATGAACGACCTGGCTTTGTATGACGTTCTTTATTTCGATGGATAGGTCGTTCATTTCGTGAACGTCCTGGACATACGGTTCACAGGGTGGCCATTCGAATCAGAATTTTTAAAATCCGTTTTTTTTTTGCTTTTGAATGAATGAAACTTTTTTAGTTTACGCCTCGTGTGACGGGCATTGCGGCAAAGATGAACGCTCATAAATACTCATAA] consensusID : consensus_9145#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 525 fasta sequence [AGAATTGCCCGAGGTGCCGTCTCATCGTAGCTGGAGTNGTAACTGAAGCTGAAATCCTCACAACTCCAGCCCAACCAACAAACCAACTACGCACAGCATGAGCAGCAAGAGCACGTTTTTCTACGAGCTGGCCCGGAAGTCGGAGAACGAAATACAGGCGACGCTGATGCGCTGCCCGAGCCACATTACCGATGCGGGACGAGAGCGAACGGCTGCTCATCCACTGGGCGGCACTCGTCGGCCAGGAGCGGCTCGTCGAGTCCATCCTCGAGCGGCACCCGGACCAGCTGAACGCGGAGGACGATGCCTGGGCTGACGCCGCTAATACTGGCCACGCTCGGTCGCCATCCGGCAATCGTCACCATGCTGACGTTTCGCGGCGCCAACGTGCACCAGCGCAGCAGGCGAGGCCATTCGGCGCTGCAGTACGCCTGCTCGAAGAACCAGCCCGCCATCGCACGGCACCTGGTGCAGCTCTGGCGCGAACGTGGACGTGGTGGACTACCTGAACGAGACGCCGCTGCA] [+] EMBL AL931784 [AGAATTGCCCGAGGTGCCGTCTCATCGTAGCTGGAGTNGTAACTGAAGCTGAAATCCTCACAACTCCAGCCCAACCAACAAACCAACTACGCACAGCATGAGCAGCAAGAGCACGTTTTTCTACGAGCTGGCCCGGAAGTCGGAGAACGAAATACAGGCGACGCTGATGCGCTGCCCGAGCCACATTACCGATGCGGGACGAGAGCGAACGGCTGCTCATCCACTGGGCGGCACTCGTCGGCCAGGAGCGGCTCGTCGAGTCCATCCTCGAGCGGCACCCGGACCAGCTGAACGCGGAGGACGATGCCTGGGCTGACGCCGCTAATACTGGCCACGCTCGGTCGCCATCCGGCAATCGTCACCATGCTGACGTTTCGCGGCGCCAACGTGCACCAGCGCAGCAGGCGAGGCCATTCGGCGCTGCAGTACGCCTGCTCGAAGAACCAGCCCGCCATCGCACGGCACCTGGTGCAGCTCTGGCGCGAACGTGGACGTGGTGGACTACCTGAACGAGACGCCGCTGCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9145#0 ------------------------------------------------------------ consensus_9145#2 -------------------------------------------GCACCCTATTATGTCTG 17 consensus_9145#1 TTTTTTCGCTTTTCACGTTTATGGAAATGAACCGAATTACCCAAGCCTACAGTACACGCG 60 consensus_9145#3 ------------------------------------------------------------ consensus_9145#0 ------------------------------------------------------------ consensus_9145#2 TGTGTGTGCTTTTTTTTAAATACTCCACGAGCGAGGATTGCGAGGTCATTTGTTGCTGTC 77 consensus_9145#1 TGGGTGAGTTTTTATTTTAAT-TTCTAAACGTGTTTAAGTCCAAGTAGTAATTTTAATTC 119 consensus_9145#3 ------------------------------------------------------------ consensus_9145#0 ------------------------------------------------------------ consensus_9145#2 AGCGAGTAGAAGCAGCATCTGAGCATCATCCAAACAGTGAATTAAAATTACTACTTGAAC 137 consensus_9145#1 ACTGTTTGGATGATGCTCAGATGCTGCTTCTACTCGCTGACAGCAACAAATGACCTCGCA 179 consensus_9145#3 -------AGAATTGCCCGAGGTGCCGTCTCATCGTAGCTGGAGTNGTAACTGAAGCTGAA 53 consensus_9145#0 -----------CAAGA-ATCGG--CCGAGGCTNACCCACGCGTGTACTGTAGGCTTCGGG 46 consensus_9145#2 TTAAACACGTTTAGAA-ATTAAAATAAAAACTCACCCACGCGTGTACTGTAGGCTT-GGG 195 consensus_9145#1 ATCCTCGCTCGTGGAGTATTTAAAAAAAAACACACACACAGACATAATAGGGTGCGCGTG 239 consensus_9145#3 ATCCTCACAACTCCAG--CCCAACCAACAAACCAACTACGCACAGCAT---------GAG 102 * ** * * * consensus_9145#0 TAATTCG-GTTCATTTCCATAAACGTGAACGTACTAGTTCTTTCAATTA-TATGAACTGA 104 consensus_9145#2 TAATTCG-GTTCATTTCCATAAACGTGAACGTACTAGTTCTTTCAATTA-TATGAACTGA 253 consensus_9145#1 CGGTACACGGGCACTTGCCAGCTCGT-AACGTAACGCTCTTAAATCTAA-CACCGCCATC 297 consensus_9145#3 CAGCAAGAGCACGTTTTTCTACGAGCTGGCCCGGAAGTCGGAGAACGAAATACAGGCGAC 162 * * ** * * * * * * consensus_9145#0 AC-GTCGCGAATCGCGATTCATTCGTTCATTTCAGTTTATCAAAAAAAAATTGGTTTAAT 163 consensus_9145#2 AC-GTCGCGAATCGCGATTCATTCGTTCATTTCAGTTTATCAAAAAAAAATTGGTTTAAT 312 consensus_9145#1 TG-ACCCCTTACTCTAACCCGCCTGGCGCCTACTTGCGACCGACGCGGACAGCACCTGGC 356 consensus_9145#3 GCTGATGCGCTGCCCGAGCCACATTACCGATGCGGG--ACGAGAGCGAACGGCTGCTCAT 220 * * * * * * * * consensus_9145#0 GCATGCAAAATGGTTTAATTTTGCAAGAGAAATTACTCTATTACATTTTGAAAATT---A 220 consensus_9145#2 GCATGCAAAATGGTTTAATTTTGCAAGAGAAATTACTCTATTACATTTTGAAAATT---A 369 consensus_9145#1 GCACG-AGCGGGACGCCAGGTCGAGCGGCGTCTTTTCGTACCG-GTTCTGCAGCTCCAGG 414 consensus_9145#3 CCACTGGGCGGCACTCGTCGGCCAGGAGCGGCTCGTCGAGTCC-ATCCTCGAGC------ 273 ** * * * * consensus_9145#0 TTTGGCAGACCATCTTTAATTCGA-CGTGTA-----GGATGTTCTTTTCGTGAACGATCT 274 consensus_9145#2 TTTGGCAGACCATCTTTAATTCGA-CGTGTA-----GGATGTTCTTTTCGTGAACGATCT 423 consensus_9145#1 TTGCGCCGCCCCGCACCAGCTCGAGCGCACACTCCTGCTTGTCCTCCTCGCAGGCCATGT 474 consensus_9145#3 ---GGCA--CCCGGACCAGCTGAA-CGCGGA-----GGACGATGCCTGGGCTGACG--CC 320 ** ** * * * ** * * * * * consensus_9145#0 GGTCATACGGTTCACGTTCATATTTGTATTGGATGAGATGAA--CGACCTCGGCGTACTA 332 consensus_9145#2 GGTCATACGGTTCACGTTCATATTTGTATTGGATGAGATGAA--CGACCTCG-CGTACTA 480 consensus_9145#1 GCAGGGGCGTGTTGCCCTCGCTGTTCGGTATGTTTTGGTGGCGCCCGCCTCGAT-CAGCA 533 consensus_9145#3 GCTAATACTGGCCACGCTCGGTCGCCATCCGGCAATCGTCA---CCATGCTGACGTTTCG 377 * * * ** * * * * consensus_9145#0 GGACGTTCTGCT-ATTCGACGGGGTANGGGAATTAACGAGTTCACGGTTTCCATTAATTT 391 consensus_9145#2 GGACGTTCTGCT-ATTCGACGGG-TAGGA------------TTACGATTCACGTTCATAT 526 consensus_9145#1 GCCCGATCAGCTCGGTCGACCCGATGGCGGTG---------GCCCGGTGCAGCGGCGTCT 584 consensus_9145#3 CGGCGCCAACGTGCACCAGCGCAGCAGG--------------CGAGGCCATTCGGCGCTG 423 ** * * * * consensus_9145#0 TGGTTA-ACTGGGGGCAGAAAAAAAGTTGGAAAACCGAAACCCTGGGGCCTTTTTGGTTA 450 consensus_9145#2 TTGT---ATGGGAGAAAATGAACGACCTGGCTTTGTATGACGTTCT--TTATTTCGATGG 581 consensus_9145#1 CGTTCAGGTAGTCCACCACGTCCACGTTCGCGCCGAGCTGCACCAGGTGCCGTGCGATGG 644 consensus_9145#3 CAGT-ACGCCTGCTCGAAGAACCAGCCCGCCATCGCACGGCACCTGGTGCAGCTC--TGG 480 * * * consensus_9145#0 TTGGACCGGT--TTCCTCTATTATTTCGGAGTGGGCAATACNGGGGTCCCGGTTTCANTN 508 consensus_9145#2 ATAGGTCGTTCATTTCGTGAACGTCCTGGACATACGGTTCACAGGGTGGCCATTCGAATC 641 consensus_9145#1 CGGGCTGGTTCTTCGAGCAGGCGTACTGCAGCGCCGAATGGCCTCGCCTGTGCGCTGGTG 704 consensus_9145#3 CGCGAACGT---------GGACGTGGTGGACTACCTGAACGAGACGCCGCTGCA------ 525 * * * * * * consensus_9145#0 TT--TCGTTGAAACGGTTNCCCCCTTTGGGGGGAAACCCANNTTAGCCAGGGGGTATATC 566 consensus_9145#2 AGAATTTTTAAAATCCGTTTTTTTTTTGCTTTTGAATGAATGAAACTTTTTTAGTTTACG 701 consensus_9145#1 CACGTTGGCGCCGCGAAACGTCAGCATGGTGACGATTGCCGGATGGCGACCGAGCGTGGC 764 consensus_9145#3 ------------------------------------------------------------ consensus_9145#0 CANCCACAGGAGGGGGTTGGGGGCGCCCACATTTCCGGGAAAATTTCNCAACGGGAACAA 626 consensus_9145#2 CCTCGTGTGACGGGCATTGCGGCAAAGATGAACGCTCATAAATACTCATAA--------- 752 consensus_9145#1 CAGTATTAGC--GGCGTCA-GCCCGGCATCGTCCTCCGCGTTCAGCTGGTCCGGGTGCCG 821 consensus_9145#3 ------------------------------------------------------------ consensus_9145#0 CTTATTCTGTGGTGACAANCAAGTTGTTGTTTCCCCCGGGGAATGNAAGTCAGAAGTNTA 686 consensus_9145#2 ------------------------------------------------------------ consensus_9145#1 CTCG----AGGATGGACTCGACGAGCCGCTCCTGGCCGACGAGTGCCGCCCAGTGGATGA 877 consensus_9145#3 ------------------------------------------------------------ consensus_9145#0 TGTGTTAGGCGCTTATTCGGCAACAANTTGGACACATTTNGAAGAACAACGTTTTTGTNN 746 consensus_9145#2 ------------------------------------------------------------ consensus_9145#1 GCAGCCGTTCGCTCTCGTCCCGCTCGGTAATGTGGCTCGGGCAGCGCATCAGCGTCGCCT 937 consensus_9145#3 ------------------------------------------------------------ consensus_9145#0 GTGATCTATGACAGGTCGTNTAACACGGCCCTTACTGGCTTTGGTTTGGAACACCGGGGG 806 consensus_9145#2 ------------------------------------------------------------ consensus_9145#1 GTATTTCGTTCTCCGACTTCCGGGCCAGCTCGTAGAAAAACGTGCTCTTGCTGCTCATGC 997 consensus_9145#3 ------------------------------------------------------------ consensus_9145#0 GGGCCCGCACATTTTTTGGCGCGGGGGGGCACAAGAGGGGAATTTGGGGAAGAAGACCGA 866 consensus_9145#2 ------------------------------------------------------------ consensus_9145#1 TGTGCGTAGTTGGTTTGTTGGTTGGGCTGGAGTTGTGAGGATTTCAGCTTCAGTTACGAC 1057 consensus_9145#3 ------------------------------------------------------------ consensus_9145#0 GGNGCGTGCCAAATTAGGAGAACAAGTTTTGAAGCGTTCCCGAAGTTTACAAAAANTAGT 926 consensus_9145#2 ------------------------------------------------------------ consensus_9145#1 TCCAGCTAC--GATGAGACGGCTATTTGCCTGTGTTGCTCGTTGGTGTACAACCACCATC 1115 consensus_9145#3 ------------------------------------------------------------ consensus_9145#0 AAGACCANANTGTGGGGGGAACACTTTCAACAAACAACACAAACGGGGTTCTTTCACTAT 986 consensus_9145#2 ------------------------------------------------------------ consensus_9145#1 GACGATGCG--------------------------------------------------- 1124 consensus_9145#3 ------------------------------------------------------------ consensus_9145#0 TTTTCANACGAGTTTNTGCAAAAAACAACTTTGTGCAACATATTTTTCTTTCAAAGAACC 1046 consensus_9145#2 ------------------------------------------------------------ consensus_9145#1 ------------------------------------------------------------ consensus_9145#3 ------------------------------------------------------------ consensus_9145#0 CCCCAAAAGTTCTAATCTTTCACAAACGTTCAGGGTGTCCCCCTTCTACACAAGCAGTTT 1106 consensus_9145#2 ------------------------------------------------------------ consensus_9145#1 ------------------------------------------------------------ consensus_9145#3 ------------------------------------------------------------ consensus_9145#0 TCACCCTCTTTTGGGGCACAATTTTTGGGGGGGAAACNGGGTTTTAGTGGGTCNACCCCA 1166 consensus_9145#2 ------------------------------------------------------------ consensus_9145#1 ------------------------------------------------------------ consensus_9145#3 ------------------------------------------------------------ consensus_9145#0 NAAGAGCCCNGAAGCCACACGTATGGTTNTGCATGNGGGNAACAGGAAGAAAACGCCCCC 1226 consensus_9145#2 ------------------------------------------------------------ consensus_9145#1 ------------------------------------------------------------ consensus_9145#3 ------------------------------------------------------------ consensus_9145#0 GCANAGTNTGAGTGAATGAATACTAGTAATGNGGGGGCGGCCCCANACTTTTGTGGGGAC 1286 consensus_9145#2 ------------------------------------------------------------ consensus_9145#1 ------------------------------------------------------------ consensus_9145#3 ------------------------------------------------------------ consensus_9145#0 AACGCANATCAGTGTAGTCGGGTGGCGTGTGAACAGAGTCTGCCCTCGCCCGCCAGCAGG 1346 consensus_9145#2 ------------------------------------------------------------ consensus_9145#1 ------------------------------------------------------------ consensus_9145#3 ------------------------------------------------------------ consensus_9145#0 CGACNCACGTTGCTGTGTTCCTACGNGGGGTAGATGGTNATAAGACGCCGCACACCAGCA 1406 consensus_9145#2 ------------------------------------------------------------ consensus_9145#1 ------------------------------------------------------------ consensus_9145#3 ------------------------------------------------------------ consensus_9145#0 GAGAGAAGGANCCAGGCCC 1425 consensus_9145#2 ------------------- consensus_9145#1 ------------------- consensus_9145#3 ------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||