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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9155#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2458 fasta sequence
[TCGTGACGCCCTGCAAGCTGGGCATCCCGAGCTTTGCCAAGTACCTGGCGTCGCATCCGTGTGATGTGTTCCACCATCTGTTCATTGGCTCGTACGGACTGGTCGTTATATCGTATCTTCGAGGCGGGTTGGGAGATTGCGTGTTTAGCTTCATGTTCATGATGGAGCTGTCCACACCGTTCGTGTCATTCCGTAGCATTCTCAGCGTGATGGGATTGAAACAGTCGAAGCTGTACGTCATCAATGGGCTGGTGATGCTGGTCACGTTCTTCTGGTGCCGCGTCTTTCTAATGCCGTACGTGTGCTACTACTACAGTCAGGTAGTGAACAAACCATTCCTAGAGGCTGTGTGGAACTTACCGTGGGGATGTAAGGTGAGCATTTTGGCACTGTTTTTGCCACAGCTCTACTGGTTCCGGTTAATGGTTCGAGGTGCAATGAAGGTTTTCTTCCCACCCGAAAAACAAGCGCAACACAACGATCGCGGCAAACTCGTGCGCCAACGAACAGGAGGCGTCCGCCAACGGTGGACCGATCAAAGCCTCACAATCCAAAGATAGCGAAATACGATCCTTAATGTAAACTGGAGCAGGGTTGCACACCGAGGATAGGTGCAGGGTGTGTATGTGGATAC-CGCAGACGACAGCTTAGGCACAAGTGTGTTTGTGTG-TAGCGCTTGGTGTGCTTTTGTGGGGATAGACCGACCGACCGACCGACCAGGCGGATGAGGGCATATATTTTGGGACGGAGGGCATCGACATCTTTAGCAACGTGTTAACGGATAAGTGTTATTTTGTGTGTAATTGGAATATGCATCGGCCAGCCATCCAGATGTAAATTGGTTACAAACGTTTTGGAGGTTCGATTTCAGCGTGCAGCGAATGGAAGGGAGGAGCAACCCGCGTGGTGTAGGGAGAGCGTGCAAACAAGGGAGAATCAGGTGTTTTCCAAAGCCAGGGAGGGTAACTTACACCCACTTCCATCTTGATACAGGCTACAAACAAACAGATAGAACCGTGTGCTGCTGCTTAGTTTACTAGTCATAGTAGTTGCGTTTTTTTGGTTCG-TTTTTTTACACCCAGCAAGCGAATCAAACCCCACTTCACCCAGTAAACAAATCAAGTGCAGGGATTGAGATGTATACCTTCCTTAGTTTCTTCCAAAA--AAAGGGTTTCTTGCCAGTCGAT-CCAGCACTGTACCTCCACGAAATGCCCACGATTACCTTAAAGTAATGATAGTATGATAG-GTTTTTTGTTGTTGATGTGAAAGCCGCTAAGTTATAGTTACTACAGTTGAGCATGGAAACCAAAACCAAACGTAGGATTAGCCGAAAATCATACCCATCCCACTGACCCACACACACACACACACACAATCAGGAACATATTAAACCCTTGTTACCACCATCCCCAGTATCCGTTAGAGGGGCATTCCACGGAACGGAAGCACACTGCATTATTACTTATATATATATACAGCGAACAACGTCTCTTGAACGGCGCGCGCTAGATGATAGACTTTTTTGTGCATTTTTTTCTACA----AAAC-AAACAAACAAAAGCATAGCGACAAAACACCCACACAAACACATATTATAGCGCACAATGTTTTTGGTGCGAATAGTTTACAAACGCGGAAAAATAGGAAAAGCGTACGATATACACAGATTACATATTCTACTCCCGCCTCCTCCTCCTACTACCCCTCTCCCAATCCCTTCGTAAGGAGTGCGTAGTTTTATGTATGGTAGCAGAGTTAGTGAGAAGATTGGCGCAAGAGGCGAACTGAGACGGTAGAAGGATTTAGTGAAGGTAGTGCAAAAGGGCATTGAGCAAAAGCTGAACGAGGATGAGTGAAACGATC-------AAACAGAAAACAGAAAATATTCATATAACTAATCAATGGAGCTTTCATATTAGTGTGATGTTTACCAATGTTATTTGTACA-CGGCGCGAAAAGAAGCGGTAGTAAGCGGCAAGGTAGCGGAATAAAGCAGCAACAGAAAACACACACACATTTCCATTGAAAGGACGACAGATAAAATAAGGGGGAAATTAAATCAAAATTTAGCTAAATGATGCTAGGACACACACACAGACACACGCATTGGCTTACACAAGTTCAGAAATCTTCACTCATTAACACATTGGCTGAGTAGGATTTAGTAGCGTTTGAGCGTAGGGAGGTGTAGCCGGGAGCAGCATTTCGATTTCGAAAGGAACGCCGGCGGGGCGGCATTAGTGTTGGCGAACAAGGGGCCGCGCAAGGTGAGAGGATTGACTTTGAAACAATCGTGTGTCTTTGTAATGTTTGCACTTTGTCGAAGCGAAACGGTTTTTGGCACACCTTTATTCCACACAGGAACGAGCGGCAAAGTGGCGAGAAGCGCACGCCTTGCGCCGCGAATCACGAACGGAAAGGACGGTGTTGGTGTGTTTGTGTATCGATTTACATAAAATAATAT]
[-] EMBL CNS09BNB [TCGTGACGCCCTGCAAGCTGGGCATCCCGAGCTTTGCCAAGTACCTGGCGTCGCATCCGTGTGATGTGTTCCACCATCTGTTCATTGGCTCGTACGGACTGGTCGTTATATCGTATCTTCGAGGCGGGTTGGGAGATTGCGTGTTTAGCTTCATGTTCATGATGGAGCTGTCCACACCGTTCGTGTCATTCCGTAGCATTCTCAGCGTGATGGGATTGAAACAGTCGAAGCTGTACGTCATCAATGGGCTGGTGATGCTGGTCACGTTCTTCTGGTGCCGCGTCTTTCTAATGCCGTACGTGTGCTACTACTACAGTCAGGTAGTGAACAAACCATTCCTAGAGGCTGTGTGGAACTTACCGTGGGGATGTAAGGTGAGCATTTTGGCACTGTTTTTGCCACAGCTCTACTGGTTCCGGTTAATGGTTCGAGGTGCAATGAAGGTTTTCTTCCCACCCGAAAAACAAGCGCAACACAACGATCGCGGCAAACTCGTGCGCCAACGAACAGGAGGCGTCCGCCAACGGTGGACCGATCAAAGCCTCACAATCCAAAGATAGCGAAATACGATCCTTAATGTAAACTGGAGCAGGGTTGCACACCGAGGATAGGTGCAGGGTGTGTATGTGGATACGCGCAGACGACAGCTTAGGCACAAGTGTGTTTGTGTG TAGCGCTTGGTGTGCTTTTGTGGGGATAGACCGACCGACCGACCGACCA ]
[+] EMBL BX603629 [ GTCCGCCAACGGTGGACCGATCAAAGCCTCACAATCCAAAGATAGCGAAATACGATCCTTAATGTAAACTGGAGCAGGGTTACACACCGAGGATAGGTGCAGGGTGTGTGTGTGGATAC CGCAGACGACAGCTTAGGCACAAGTGTGTTTGTGTGCTAGCGCTTGGTGTGCTTTTGTGGGGATAGACCGACCGACCGACCGACCAGGCGGATGAGGGCATATATTTTGGGACGGAGGGCATCGACATCTTTAGCAACGTGTTAACGGATAAGTGTTATTTTGTGTGTAATTGGAATATGCATCGGCCAGCCATCCAGATGTAAATTGGTTACAAACGTTTTGGAGGTTCGATTTCAGCGTGCAGCGAATGGAAGGGAGGAGCAACCCGCGTGGTGTAGGGAGAGCGTGCAAACAAGGGAGAATCAGGTGTTTTCCAAAGCCAGGGAGGGTAACTTACACCCACTTCCATCTTGATACAGGCTACAAACAAACAGATAGAACCGTGTGCTGCTGCTTAGTTTACTAGTCATAGTAGTTGCGTTTTTTTGGTTCG TTTTTTTACACCCAGCAAGCGAATCAAACCCCACTTCACCCAGTAAACAAATCAAGTGCAGGGATTGAGATGTATACCTTCCTTAGTTTCTTCCAAAAAGAAAGGGTTTCTTGCCAGTCGAT CCAGCACTGTACCTCCACGAAATGCCCACGATTACCTTAAAGTAATGATAGTATGATAG GTTTTTTGTTGTTGA ]
[+] EMBL CNS09QLF [ AGGTTCGATTTCAGCGTGCAGCTAATGGAAGGGAGGAGCAACCCGCGTGGTGTAGGGAGAGCGTGCAAATAAGGGAGAATCAGGTGTTTTCCAAGGCCAGGGATAGTAACTTACACCCACTTCCATCTTGATACAGGCTACAAACAAATAGGTAGAACCGTGTGCTGCTGCTCAGTTTACTAGTCATAGTAGTTGCGTTTTTTTGGTTCGTTTTTTTTACACCCAGCAAGCGAATCAAACCCCACTTCACCCAGTAAACAAATCAAGTGCAGGGATTGAGATGTATACCTTCCTTAGTTTCTTCCAAAA AAAGGGTTTCTTGCCAGTCGATCCCAGCCCTGTACCTCCACAAAATG CGCGATTACCTTAAAGTAATGATAGTATGATAGTTTTTTTTGTTGTTGATGTGAAAGCCGCTAAGTTATAGTTACTACAGTTGAGCATGGAAACCAAAACCAAACGTAGGATTAGCCGAAAATCATACCCATCCCACTGACCCACACACACACACACACACAATCAGGAACATATTAAACCCTTGTTACCACCATCCCCAGTATCCGTTAGAGGGGCATTCCACGGAACGGAAGCACACTGCATTATTACTTATATATATATACAGCGAACAACGTCTCTTGAACGGCGCGCGCTAGATGATAGACTTTTTTGTGCATTTTTTTCTACA AAAC AAACAAACAAAAGCATAGCGACAAAACACCCACACAAACACATATTATAGCGCACAATGTTTTTGGTGCGAATAGTTTACAAACGCGGAAAAATAGGAAAAGCGTACGATATACACAGATTACATATTCTACTCCCGCCTCCTCCTCCTACTACCCCTCTCCCAATCCCTTCGTAAGGAGTGCGTAGTTTTATGTATGGTAGCAGAGTTAGTGAGAAGATTTTTTTAAGAGGCGAACTGAGACGGTAGAAGGATTTAGGGAAGGGAGTGCAAAAGGGCATTGAGCAAA ]
[+] EMBL BM591198 [ ccgcaaAAAG AAAGGGTTTCTTGCCAGTCGAT CCAGCACTGTACCTCCACGAAATGCCCACGATTACCTTAAAGTAATGATAGTATGATAG GTTTTTTGTTGTTGATGTGAAAGCCGCTAAGTTATAGTTACTACAGTTGAGCATGGAAACCAAAACCAAACGTAGGATTAGCCGAAAATCATACCCATCCCACTGACC CACACACACACACACAATCAGGAACATATTAAACCCTTGTTACCACCATCCCCAGTATCCGTTAGAGGGGCATTCCACGGAACGGAAGCGCACTGCATTATTACTTATATATATATACAGCGAACAACGTCTCTTGAACGGCGCGCGCTAGATGATAGACTTTTTTGTGCATTTTTTTCTACAAAACAAAC AAACAAACAAAAGCATAGCGACAAAACACCCACACAAACACATATTATAGCGCACAATGTTTTTGGTGCGAATAGTTTACAAACGCGGAAAAATAGGAAAAGCGTACGATATACACGGATTACATATTCTACTCCCGCCTCCTTCTCCTACTACCCCTCTCCCAATCCCTTCGTAAGGAGTGCGTAGTTTTATGTATGGTAGCAGATTTAGTGAGAAGAATGGCGCAAGAGGCGAACTGAGACGGTAGAAGGATCTAGTGAAGGTAGTGCAAAAGCGCAT CAAAAGCTGAACGAGGATGAGTGAA ]
[-] EMBL CNS09QLG [ ACA AAACAAAAAAAAAAAAAGCATAGCGACAAAACACCCACACAAACACATATTATAGCGCACAATGTTTTTGGTGCGAATAGTTTACAAACGCGGAAAAATAGGAAAAGCGTACGATATACACAGATTACATATTCTACTCCCGCCTCCTCCTCCTACTACCCCTCTCCCAATCCCTTCGTAAGGAGTGCGTAGTTTTATGTATGGTAGCAGAGTTAGTGAGAAGATTGGCGCAAGAGGCGAACTGAGACGGTAGAAGGATTTAGTGAAGGTAGTGCAAAAGGGCATTGAGCAAAAGCTGAACGAGGATGAGTGAAACGATC AAACAGAAAACAGAAAATATTCATATAACTAATCAATGGAGCTTTCATATTAGTGTGATGTTTACCAATGTTATTTGTACACCGGCGCGAAAAGAAGCGGTAGTAAGCGGCAAGGTAGCGGAATAAAGCAGCAACAGAAAACACACACACATTTCCATTGAAAGGACGACAGATAAAATAAGGGGGAAATTAAATCAAAATTTAGCTAAATGATGCTAGGACACACACACAGACACACGCATTGGCTTACACAAGTTCAGAAATCTTCACTCATTAACACATTGGCTGAGTAGGATTTAGTAGCGTTTGAGCGTAGGGAGGTGTAGCCGGGAGCAGCATTTCGATTTCGAAAGGAACGCCGGCGGGGCGGCATTAGTGTTGGCGAACAAGGGGCCGCGCAAGGTGAGAGGATTGACTTTGAAACAATCGTGTGTCTTTGTAATGTTTGCACTTTGTCGAAGCGAAACGGTTTTTGGCACACCTTTATTCCACACAGGAACGAGCGGCAAAGTGGCGAGAAGCGCACGCCTTGCGCCGCGAATCACGAACGGAAAGGACGGTGTTGGTGTGTTTGTGTATCGATTTACATAAAATAATAT]
[+] EMBL BM628652 [ ccgATAGCGACAAAACACCCACACAAACACATATTATAGCGCACAATGTTTTTGGTGCGAATAGTTTACAAACGCGGAAAAATAGGAAAAGCGTACGATATACACGGATTACATATTCTACTCCCGCCTCCTTCTCCTACTACCCCTCTCCCAATCCCTTCGTAAGGAGTGCGTAGTTTTATGTATGGTAGCAGATTTAGTGAGAAGAATGGCGCAAGAGGCGAACTGAGACGGTAGAAGGATCTAGTGAAGGTAGTGCAAAAGCGCAT CAAAAGCTGAACGAGGATGAGTGAAACGATCAAACAGAAAACAGAAAACAGAAAATATTCATATAACTAATCAATGGAGCTTTCATATTAGTGTGATGTTTACCAATGTTATTTGTACA CGGCGCGAAAAGAAGCGGTAGTAAGCGGCAAGGTAGCGGAATAAAGCAGCAACAGAAAACACACACACATTTCCATTGAAAGGACGACAGATAAAATAAGGGGGAAATTTAATCAAAATTT ]
[+] EMBL BX626322 [ gggcttcGTGGCGAGAAGCGCACGCCTTGCGCCGCGAATCACGAACGGAAAGGACGGTGTTGGTGTGTTTGTGTATCGATTTACATAAAATAATAT]
consensusID : consensus_9155#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 711 fasta sequence
[CCTCCTACTACCCCTCTCCCAATCCCTTCGTAAGGAGTGCGTAGTTTTATGTATGGTAGCAGAGTTAGTGAGAAGATTGGCGCAAGAGGCGAACTGAGACGGTAGAAGGATTTAGTGAAGGTAGTGCAAAAGGGCATTGAGCAAAAGCTGAACGAGGATGAGTGAAACGATC-------AAACAGAAAACAGAAAATATTCATATAACTAATCAATGGAGCTTTCATATTAGTGTGATGTTTACCAATGTTATTTGTACACGGCGCGAAAAGAAGCGGTAGTAAGCGGCAAGGTAGCGGAATAAAGCAGCAACAGAAAACACACACACATTTCCATTGAAAGGACGACAGATAAAATAAGGGGGAAATTTAATCAAAATTTAGCTGAATGATGCTAGGACACACACACAGACTGACCTGTGGGGTAGTTTTGAGACACACACAGACACACGCATTGGCTTACACAAGTTCGGACATCTTCACTCA-TAA-ACATTGGCTGAGTAGGATTTAGTAGCGTTTGAGCGTAGGGAGGTGTAGCCGGGAGCAGCATTTCGATTTCGAAAGGAACGCCGGCGGGGCGGCATTAGTGTTGGCGAACAAGGGGCCGCGCAAGGTGAGAGGATATGACTTTGAAACAATCGCGTGTTTTTTGTAATGTTGCACTTTGTCGAAGCGAAACGGTTTTTGGCACACCTTTATTCCACACAGGAACGAGCGGC]
[+] EMBL BX623511 [CCTCCTACTACCCCTCTCCCAATCCCTTCGTAAGGAGTGCGTAGTTTTATGTATGGTAGCAGAGTTAGTGAGAAGATTGGCGCAAGAGGCGAACTGAGACGGTAGAAGGATTTAGTGAAGGTAGTGCAAAAGGGCATTGAGCAAAAGCTGAACGAGGATGAGTGAAACGATC AAACAGAAAACAGAAAATATTCATATAACTAATCAATGGAGCTTTCATATTAGTGTGATGTTTACCAATGTTATTTGTACACGGCGCGAAAAGAAGCGGTAGTAAGCGGCAAGGTAGCGGAATAAAGCAGCAACAGAAAACACACACACATTTCCATTGAAAGGACGACAGATAAAATAAGGGGGAAATTAAATCAAAATTTAGCTAAATGATGCTAGGACACACACACAGACTGACCTGTGGGGTAGTTTTGGGACACACACAGACACACGCATTGGCTTACACAAGTTCAGAAATCTTCACTCATTAACACATTGGCTGAGTAGGATTTAGTAGCGTTTGAGCGTAGGGAGGTGTAGCCGGGAGCAGCATTTCGATTTCGAAAGGAACGCCGGCGGGGCGGCATTAGTGT ]
[+] EMBL BX611508 [ GGATGAGTGAAACGATCAAACAGAAAACAGAAAACAGAAAATATTCATATAACTAATCAATGGAGCTTTCATATTAGTGTGATGTTTACCAATG TATTTGTACACGGCGCGAAAAGAAGCGGTAGTAAGCGGCAAGGTAGCGGAATAAAGCAGCAACAGAAAACACACACACATTTCCATTGAAAGGACGACAGATAAAATAAGGGGGAAATTTAATCAAAATTTAGCTGAATGATGCTAGGACACACACACAGACTGACCTGTGGGGTAGTTTTGAGACACACACAGACACACGCATTGGCTTACACAAGTTCGGACATCTTCACTCA TAA ACATTGGCTGAGTAGGATTTAGTAGAGTTTGAGCGTAGGGGGGTGTAGCCGGGAGCAGTATTTCGATTTCGAAAGGAATGCCGGCGGGGCGGCATTAGTGTTGGCGAACAAGGGGCCGCGCAAGGTGAGAGGATATGACTTTGAAACAATCGCGTGTTTTTTGTAATGTTGCACTTTGTCGAAGCGAAACGGTTTTTGGCACACCTTTATTCCACACAGGAACGAGCGGC]
[+] EMBL BM602536 [ ccgAGAAAACAGAAAATATTCATATAACTAATCAATGGAGCTTTCATATTAGTGTGATGTTTACCAATGTTATTTGTACACGGCGCGAAAAGAAGCGGTAGTAAGCGGCAAGGTAGCGGAATAAAGCAGCAGCAG ]
[+] EMBL BX604845 [ GCGCGAAAAGAAGCGGTAGTAAGCGGCAAGGGAGCGGAATAAAGCAGCAACAGAAAACACACACACATTTCCATTGAAAGGACGACAGATAAAATAAGGGGGAAATTTAATCAAAATTTAGCTGAAGGATGCTAGGACACACACACAGACGGACCTGTGGGGTAGTTTTGAGACACACACAGACACACGCATTGGCTTACACAAGTTCGGACATCTTCACTCA TAA ACAcat ]
consensusID : consensus_9155#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 682 fasta sequence
[CCGGGTTCGAGGTGCAATGAAGGTTTTCTTCCCACCGAAAAACAAGCGCAACACAACGATCGCGGCAAACTCGTGCGCCAACGAAGAGGAGGCGTCCGCCAACGGTGGACCGATCAAAGCCTCACAATCCAAAGATAGCGAAATACGATCCTTAATGTAAACTGGAGCAGGGTTACACACCGAGGATAGGTGCAGGGTGTGTGTGGATACCGCAGACGACAGCTTAGGCACAAGTGTGTTTGTGTGCTAGCGCTTGGTGTGCTTTTGTGGGGATAGACCGACCGACCGACCGACCGACCAGGCGGATCAGGGCATATATTTTGGGACGGAGGGCATCGACATCTTTAGCAACGTGTTAATGGATAAGTGTTATTTTGTGTGTAATTGGAATATGCATCGGCCAGCCATCCAGATGTAAATTGGTTACAAACGTTTTGGAGGTTCGATTTCAGCGTGCAGCTAATGGAAGGGAGGAGCAACCCGCGTGGTGTAGGGAGAGCGTGCAAATAAGGGAGAATCAGGTGTTTTCCAAGGCCAGGGGATAGTAACTTACACCCACTTCCATCTTGATACAGGCTACAAACAAACATGTAGAACCGTGTGCTGCTGCTTAGTTTACTAGTCATAGTAGTTGCGGTTTTTTTGGTTCAATTTTTTACACCCAGCACCCAGTAAGCGAATC]
[+] EMBL BM653697 [CCGGGTTCGAGGTGCAATGAAGGTTTTCTTCCCACCGAAAAACAAGCGCAACACAACGATCGCGGCAAACTCGTGCGCCAACGAAGAGGAGGCGTCCGCCAACGGTGGACCGATCAAAGCCTCACAATCCAAAGATAGCGAAATACGATCCTTAATGTAAACTGGAGCAGGGTTACACACCGAGGATAGGTGCAGGGTGTGTGTGGATACCGCAGACGACAGCTTAGGCACAAGTGTGTTTGTGTGCTAGCGCTTGGTGTGCTTTTGTGGGGATAGACCGACCGACCGACCGACCGACCAGGCGGATCAGGGCATATATTTTGGGACGGAGGGCATCGACATCTTTAGCAACGTGTTAATGGATAAGTGTTATTTTGTGTGTAATTGGAATATGCATCGGCCAGCCATCCAGATGTAAATTGGTTACAAACGTTTTGGAGGTTCGATTTCAGCGTGCAGCTAATGGAAGGGAGGAGCAACCCGCGTGGTGTAGGGAGAGCGTGCAAATAAGGGAGAATCAGGTGTTTTCCAAGGCCAGGGGATAGTAACTTACACCCACTTCCATCTTGATACAGGCTACAAACAAACATGTAGAACCGTGTGCTGCTGCTTAGTTTACTAGTCATAGTAGTTGCGGTTTTTTTGGTTCAATTTTTTACACCCAGCACCCAGTAAGCGAATC]
consensusID : consensus_9155#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 298 fasta sequence
[GCAGATCGCCCGAGGNNCNNAGGTGTGCTTTTGTGGGGATAGACCGACAGCGCGGATGAGGGCATATATTTTGGGACGGAGGGCATCGACATCTTTAGCAACGTGTTAACGGATAAGTGTTATTTTGTGTGTAATTGGAATATGCATCGGCAGCATCCAGATGTAAATTGGTTACNAACCGTTTTGGAGGTTCGATTTCAGCGTGCAGCGAATGGAAGGGAGGAGCAACCCGCGTGGTGTAGGAGAGCGTGCCAAACCAAGGGAGAATCAGTGTTTTCCAAAGCCAGAGGGTAACTTA]
[+] EMBL AL696922 [GCAGATCGCCCGAGGNNCNNAGGTGTGCTTTTGTGGGGATAGACCGACAGCGCGGATGAGGGCATATATTTTGGGACGGAGGGCATCGACATCTTTAGCAACGTGTTAACGGATAAGTGTTATTTTGTGTGTAATTGGAATATGCATCGGCAGCATCCAGATGTAAATTGGTTACNAACCGTTTTGGAGGTTCGATTTCAGCGTGCAGCGAATGGAAGGGAGGAGCAACCCGCGTGGTGTAGGAGAGCGTGCCAAACCAAGGGAGAATCAGTGTTTTCCAAAGCCAGAGGGTAACTTA]
consensusID : consensus_9155#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 86 fasta sequence
[TGANCTCAGGGCAGAATCGCCCCGANGTTNGGAATATGCATCGGCAGCATCCAGATGTAAATTGGTTACAAACGTTTGGAGGTTCG]
[+] EMBL AL697189 [TGANCTCAGGGCAGAATCGCCCCGANGTTNGGAATATGCATCGGCAGCATCCAGATGTAAATTGGTTACAAACGTTTGGAGGTTCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 TCGTGACGCCCTGCAAGCTGGGCATCCCGAGCTTTGCCAAGTACCTGGCGTCGCATCCGT 60
consensus_9155#1 ------------------------------------------------------------
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 GTGATGTGTTCCACCATCTGTTCATTGGCTCGTACGGACTGGTCGTTATATCGTATCTTC 120
consensus_9155#1 ------------------------------------------------------------
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 GAGGCGGGTTGGGAGATTGCGTGTTTAGCTTCATGTTCATGATGGAGCTGTCCACACCGT 180
consensus_9155#1 ------------------------------------------------------------
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 TCGTGTCATTCCGTAGCATTCTCAGCGTGATGGGATTGAAACAGTCGAAGCTGTACGTCA 240
consensus_9155#1 ------------------------------------------------------------
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 TCAATGGGCTGGTGATGCTGGTCACGTTCTTCTGGTGCCGCGTCTTTCTAATGCCGTACG 300
consensus_9155#1 ------------------------------------------------------------
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 TGTGCTACTACTACAGTCAGGTAGTGAACAAACCATTCCTAGAGGCTGTGTGGAACTTAC 360
consensus_9155#1 ------------------------------------------------------------
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 CGTGGGGATGTAAGGTGAGCATTTTGGCACTGTTTTTGCCACAGCTCTACTGGTTCCGGT 420
consensus_9155#1 ----------------------------------------CCTCCTACTACCCCTCTCCC 20
consensus_9155#2 -CCGGGTTCGAGGTGCAATGAAGGTTTTCTTCCCACC-GAAAAACAAGCGCAACACAACG 58
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 TAATGGTTCGAGGTGCAATGAAGGTTTTCTTCCCACCCGAAAAACAAGCGCAACACAACG 480
consensus_9155#1 AATCCCTTCGTAAGGAGTGCGTAGTTTTATGTATGGTAGCAGAGTTAGTGAGAAGATTGG 80
consensus_9155#2 ATCGCGGCAAACTCGTGCGCCAACGAAGAGGAGGCGTCCGCCAACGGTGGACCGATCAAA 118
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 ATCGCGGCAAACTCGTGCGCCAACGAACAGGAGGCGTCCGCCAACGGTGGACCGATCAAA 540
consensus_9155#1 CGCAAGAGGCGAACTGAGACGGTAGAAGGATTTAGTGAAGGTAGTGCAAAAGGGCATTGA 140
consensus_9155#2 GCCTCACAATCCAAAGATAGCGAAATACGATCCTTAATGTAAACTGGAGCAGGGTTACAC 178
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 GCCTCACAATCCAAAGATAGCGAAATACGATCCTTAATGTAAACTGGAGCAGGGTTGCAC 600
consensus_9155#1 GCAAAAGCTGAACGAGGATGAGTGAAACGATCAAACAGAAAACAGAAAATATTCATATAA 200
consensus_9155#2 ACCGAGGATAGGTGCAGGGTGTGT--GTGGATACCGCAGACGACAGCTTAGGCACAAGTG 236
consensus_9155#3 ---------------------------------------------------------GCA 3
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 ACCGAGGATAGGTGCAGGGTGTGTATGTGGATACCGCAGACGACAGCTTAGGCACAAGTG 660
consensus_9155#1 CTAATCAATGGAGCTTTCATATTAGTGTGATGTTTACCAATGTTATTTGTACACGGCGCG 260
consensus_9155#2 TGTTTGTGTGCTAGCGCTTGGTGTGCTTTTGTGGGGATAGACCGACCGACCGACCGACCG 296
consensus_9155#3 -GATCGCCCGAGGNNCNNAGGTGTGCTTTTGTGGGGATAGACCGACAGC----------- 51
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 TGTTTGTGTG-TAGCGCTTGGTGTGCTTTTGTGGGGATAGACCGACCGACCGACCGACC- 718
consensus_9155#1 AAAAGAAGCGGTAGTAAGCGGCAAGGTAGCGGAATAAAGCAGCAACAGAAAACACACACA 320
consensus_9155#2 A----CCAGGCGGATCAGGGCATATATTTTGGGACGGAGGGCATCGACATCTTTAGCAAC 352
consensus_9155#3 ---------GCGGATGAGGGCATATATTTTGGGACGGAGGGCATCGACATCTTTAGCAAC 102
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 -------AGGCGGATGAGGGCATATATTTTGGGACGGAGGGCATCGACATCTTTAGCAAC 771
consensus_9155#1 CATTTCCATTGAAAGGACGACAGATAAAATAAGGGGGAAATTTAATCAAAATTTAGCTGA 380
consensus_9155#2 GTGTTAATGGATAAGTGTTATTTTGTGTGTAATTGGAATATGCATCGGCCAGCCATCCAG 412
consensus_9155#3 GTGTTAACGGATAAGTGTTATTTTGTGTGTAATTGGAATATGCATCGGC--AGCATCCAG 160
consensus_9155#4 -TGANCTCAGGGCAGAATCGCCCCG---ANGTTNGGAATATGCATCGGC--AGCATCCAG 54
consensus_9155#0 GTGTTAACGGATAAGTGTTATTTTGTGTGTAATTGGAATATGCATCGGCCAGCCATCCAG 831
consensus_9155#1 ATGATGCTAGGACACACACACAGACTG-ACCTGTGGGGTAGTTTTGAGACACACACAGAC 439
** * * ** ** * * ** *
consensus_9155#2 ATGTAAATTGGTTACAAAC-GTTTTGGAGGTTCGATTTCAGCGTGCAGCTAATGGAAGGG 471
consensus_9155#3 ATGTAAATTGGTTACNAACCGTTTTGGAGGTTCGATTTCAGCGTGCAGCGAATGGAAGGG 220
consensus_9155#4 ATGTAAATTGGTTACAAAC--GTTTGGAGGTTCG-------------------------- 86
consensus_9155#0 ATGTAAATTGGTTACAAAC-GTTTTGGAGGTTCGATTTCAGCGTGCAGCGAATGGAAGGG 890
consensus_9155#1 ACACGCATTGGCT-TACACAAGTTCGGACATCTTCACTCA-TAAACATTGGCTGAGTAGG 497
* ***** * ** ** *** *
consensus_9155#2 AGGAGCAACCCGCGTGGTGTAGGGAGAGCGTGCAAA--TAAGGGA---GAATCAGGTGTT 526
consensus_9155#3 AGGAGCAACCCGCGTGGTGTAGG-AGAGCGTGCCAAACCAAGGGA---GAATCAG-TGTT 275
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 AGGAGCAACCCGCGTGGTGTAGGGAGAGCGTGCAAA--CAAGGGA---GAATCAGGTGTT 945
consensus_9155#1 ATTTAGTAGCGTTTGAGCGTAGGGAGGTGTAGCCGGGAGCAGCATTTCGATTTCGAAAGG 557
consensus_9155#2 TTCCAAGGCCAGGGGATAGTAACTTACACCCACTTCCATCTTGATACAGGCTACAAACAA 586
consensus_9155#3 TTCCAAAGCCAGAGG---GTAACTTA---------------------------------- 298
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 TTCCAAAGCCAGGGAG-GGTAACTTACACCCACTTCCATCTTGATACAGGCTACAAACAA 1004
consensus_9155#1 AACGCCGGCGGGGCGGCATTAGTGTTGGCGAACAAGGGGCCGCGCAAGGTGAGAGGATAT 617
consensus_9155#2 ACATGTAGAACCGTGTGCTGCTGCTTAGTTTACTAGTCATAGTAGTTGCGGTTTTTTTGG 646
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 ACAGATAGAACCGTGTGCTGCTGCTTAGTTTACTAGTCATAGTAGTTGCG-TTTTTTTGG 1063
consensus_9155#1 GACTTTGAAACAATCGCGTGTTTTTTGTAATGTTGCACTTTGTCGAAGCGAAACGGTTTT 677
consensus_9155#2 TTCAATTTTTTACACCCAGCACCCAGTAAGCGAATC------------------------ 682
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 TTCGTTTTTTTACACCCAGCAAGCGAATCAAACCCCACTTCACCCAGTAAACAAATCAAG 1123
consensus_9155#1 TGGCACACCTTTATTCCACACAGGAACGAGCGGC-------------------------- 711
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 TGCAGGGATTGAGATGTATACCTTCCTTAGTTTCTTCCAAAAAAAGGGTTTCTTGCCAGT 1183
consensus_9155#1 ------------------------------------------------------------
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 CGATCCAGCACTGTACCTCCACGAAATGCCCACGATTACCTTAAAGTAATGATAGTATGA 1243
consensus_9155#1 ------------------------------------------------------------
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 TAGGTTTTTTGTTGTTGATGTGAAAGCCGCTAAGTTATAGTTACTACAGTTGAGCATGGA 1303
consensus_9155#1 ------------------------------------------------------------
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 AACCAAAACCAAACGTAGGATTAGCCGAAAATCATACCCATCCCACTGACCCACACACAC 1363
consensus_9155#1 ------------------------------------------------------------
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 ACACACACACAATCAGGAACATATTAAACCCTTGTTACCACCATCCCCAGTATCCGTTAG 1423
consensus_9155#1 ------------------------------------------------------------
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 AGGGGCATTCCACGGAACGGAAGCACACTGCATTATTACTTATATATATATACAGCGAAC 1483
consensus_9155#1 ------------------------------------------------------------
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 AACGTCTCTTGAACGGCGCGCGCTAGATGATAGACTTTTTTGTGCATTTTTTTCTACAAA 1543
consensus_9155#1 ------------------------------------------------------------
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 ACAAACAAACAAAAGCATAGCGACAAAACACCCACACAAACACATATTATAGCGCACAAT 1603
consensus_9155#1 ------------------------------------------------------------
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 GTTTTTGGTGCGAATAGTTTACAAACGCGGAAAAATAGGAAAAGCGTACGATATACACAG 1663
consensus_9155#1 ------------------------------------------------------------
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 ATTACATATTCTACTCCCGCCTCCTCCTCCTACTACCCCTCTCCCAATCCCTTCGTAAGG 1723
consensus_9155#1 ------------------------------------------------------------
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 AGTGCGTAGTTTTATGTATGGTAGCAGAGTTAGTGAGAAGATTGGCGCAAGAGGCGAACT 1783
consensus_9155#1 ------------------------------------------------------------
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 GAGACGGTAGAAGGATTTAGTGAAGGTAGTGCAAAAGGGCATTGAGCAAAAGCTGAACGA 1843
consensus_9155#1 ------------------------------------------------------------
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 GGATGAGTGAAACGATCAAACAGAAAACAGAAAATATTCATATAACTAATCAATGGAGCT 1903
consensus_9155#1 ------------------------------------------------------------
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 TTCATATTAGTGTGATGTTTACCAATGTTATTTGTACACGGCGCGAAAAGAAGCGGTAGT 1963
consensus_9155#1 ------------------------------------------------------------
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 AAGCGGCAAGGTAGCGGAATAAAGCAGCAACAGAAAACACACACACATTTCCATTGAAAG 2023
consensus_9155#1 ------------------------------------------------------------
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 GACGACAGATAAAATAAGGGGGAAATTAAATCAAAATTTAGCTAAATGATGCTAGGACAC 2083
consensus_9155#1 ------------------------------------------------------------
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 ACACACAGACACACGCATTGGCTTACACAAGTTCAGAAATCTTCACTCATTAACACATTG 2143
consensus_9155#1 ------------------------------------------------------------
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 GCTGAGTAGGATTTAGTAGCGTTTGAGCGTAGGGAGGTGTAGCCGGGAGCAGCATTTCGA 2203
consensus_9155#1 ------------------------------------------------------------
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 TTTCGAAAGGAACGCCGGCGGGGCGGCATTAGTGTTGGCGAACAAGGGGCCGCGCAAGGT 2263
consensus_9155#1 ------------------------------------------------------------
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 GAGAGGATTGACTTTGAAACAATCGTGTGTCTTTGTAATGTTTGCACTTTGTCGAAGCGA 2323
consensus_9155#1 ------------------------------------------------------------
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 AACGGTTTTTGGCACACCTTTATTCCACACAGGAACGAGCGGCAAAGTGGCGAGAAGCGC 2383
consensus_9155#1 ------------------------------------------------------------
consensus_9155#2 ------------------------------------------------------------
consensus_9155#3 ------------------------------------------------------------
consensus_9155#4 ------------------------------------------------------------
consensus_9155#0 ACGCCTTGCGCCGCGAATCACGAACGGAAAGGACGGTGTTGGTGTGTTTGTGTATCGATT 2443
consensus_9155#1 ------------------------------------------------------------
consensus_9155#2 ---------------
consensus_9155#3 ---------------
consensus_9155#4 ---------------
consensus_9155#0 TACATAAAATAATAT 2458
consensus_9155#1 ---------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||