cluster # 9174

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 9174 cluster # 9174 Sequences # 14 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9174#0 length = 1010 sequences # 7
consensus_9174#1 length = 839 sequences # 5

consensus_9174#2 length = 679 sequences # 1
consensus_9174#3 length = 562 sequences # 1

consensusID : consensus_9174#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1010
fasta sequence

                              [CCGCCCACGCGTCCGCCCACGCGTCCGGTGAAATCGATCGGTACGGAGCCGAGGACCACATTCACGTTTTGGCTCTCGCATATAAATTTCGGTACATCGTTCACATTTCTTTTCCGCCCGTTAGAAGAAAAAAAAAATGTCTTCCAAATCCGCTTTTAATTCCTGCTCCTATGCGCAGAACATCGATCGCACAGAAAACCACTCTACAAGAGACCGTCGCGCCGGTAGAAAGCGCGACTACGGGTGTAGTCTCACCGGAAGTGTTCGACGAGTCGCTCAACAATGCTGCAGCAAGTGCGGCACAGTCCGTGCACCACATAGCAGATATCCTTCAGCGTCCGATTTCCGACGAGCTCATGAAAAAACTGTGCTTCAGCGAACTGCTGCTTGTGTGTGATGGCAGCGAGACCATCGTTGGAGGGGCCGCTATCAACGTCAGCCTGATAGCGGAAGAAGTATTGGCGGCATTTTCCAGCACCAGACTCACAATTCTTGGACATTCTACGGCGGAAAGTGAGCTGATGTCATTTGCGGACCGAAACTGTCGACCGCTGCAGGAGCGCAAATGCGAAACACTCATTTCTGGTACAATCAGGCAGGAGAAACAAATACAACTCTACTTTGATGAGGCCCACAACGTCACAGCTTACAGGCAGGAAAGCAATGGGTTGCAGACCGAAAGCTTTCACGGTTTGCTGTCGGGCCCGGGAAGGAGCGGGGAAGAAGACTCGGCTGACGACAACAGGCCTACTATTTTGCCCGATGGACTGCAGCTGCTACTCTTGCGGTACTTAGTGCTGTCCAACTTTGTAGGCGAAATTTGCAGCCAAACAATCGACATTCAGGGAAGGGTTGGAAATTGCATTCACCAAATTTCGGCCACTATTCCAGTACC-AAAGCATCGACGCGAANGTACAGCTGAAGCAGTGAANGAGATCAGAAAATCGACTTGGTATTCGGATGGCACAGAGCCAGAANAAAGTGTATCGCATTACGACGCCTCGACGGGG]

[+] EMBL BM604354             [CCGCCCACGCGTCCGCCCACGCGTCCGGTGAAATCGATCGGTACGGAGCCGAGGACCACATTCACGTTTTGGCTCTCGCATATAAATTTCGGTACATCGTTCACATTTCTTTTCCGCCCGTTAGAAGAAAAAAAAAATGTCTTCCAAATCCGCTTTTAATTCCTGCTCCTATGCGCAGAACATCGATCGCACAGAAAACCACTCTACAAGAGACCGTCGCGCCGGTAGAAAGCGCGACTACGGGTGTAGTCTCACCGGAAGTGTTCGACGAGTCGCTCAACAATGCTGCAGCAAGTGCGGCACAGTCCGTGCACCACATAGCAGATATCCTTCAGCGTCCGATTTCCGACGAGCTCATGAAAAAACTGTGCTTCAGCGAACTGCTGCTTGTGTGTGATGGCAGCGAGACCATCGTTGGAGGGGCCGCTATCAACGTCAGCCTGATAGCGGAAGAAGTATTGGCGGCATTTTCCAGCACCAGACTCACAATTCTTGGACATTCTACGGCGGAAAGTGAGCTGATGTCATTTGCGGACCGAAACTGTCGACCGCTGCAGGAGCGCAAATGCGAAACACTCATTTCTGGTACAATCAGGCAGGAGAAACAAATACAACTCTACTTTGATGAGGGCCACAACGTCACAGCTTACAGGCAGGAAAGCA                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM599387             [                     ccggcaGTGAAATCGATCGGTACGGAGCCGAGGACCACATTCACGTTTTGGCTCTCGCATAGAAATTTCGGTAGATCGTTCACATTTCTTTTCCGCCCGTTAG      AAAAAAATGTCTTCCAAATCCGCTATTAATTCCTGCTCCTATGCGCAGGACATCGATCGCACAGAAAACCACTCTACAAGAGACCGTCGCGCCGGTAGAAAGCGCGACTACGGGTGTAGTCTCACCGGAAGTGTTCGACGAGCCGCTCAACAATGCTGCAGCAAGTGCGGCACAGTCCGTGCACCACATAGCAGATATCCTTCAGCGTCCGATTTCCGACGAGGTCATGAAAAAACTGTGCTTCAGCGAACTGCTGCTTGTGTGTGATGGCAGCGAGACCATCGTTGGAGGGGCCGCTATCAACGTCAGCCTGATAGCGGAAGAAGTATTGGCGGCATTTTCCAGCACCAGACTCACAATTCTTGGACATTCTACGGCGGAAAGTGAGCTGATGTCATTTGCGGACCGAAACTGTCGACCGCTGCAGGAGCGCAAATGCGAAACGCTCATTTCTGGTACAATCAGGCAGGAGAAACAAATACAA                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX623373             [                                                                                                                                                                                                       CACTCTACAAGAGACCGTCGCGCCGGTAGAAAGCGCGACTACGGGTGTAGTCTCACCGGAAGTGTTCGACGAGTCGCTCAACAATGCTGCAGCAAGTGCGGCACAGTCCGTGCACCACATAGCAGATATCCTTCAGCGTCCGATTTCCGACGAGCTCATGAAAAAACTGTGCTTCAGCGAACTGCTGCTTGTGTGTGATGGCAGCGAGACCATCGTTGGAGGGGCCGCTATCAACGTCAGCCTGATAGCGGAAGAAGTATTGGCGGCATTTTCCAGCACCAGACTCACAATTCTTGGACATTCTACGGCGGAAAGTGAGCTGATGTCATTTGCGGACCGAAACTGTCGACCGCTGCANGAGCGCAAATGCGAAACACTCATTTCTGGTACAATCAGGCAGGAGAAACAAATACAACTCTACTTTGATGAGGCCCACAACGTCACAGCTTACAGGCAGGAAAGCAATGGGTTGCAGACCGAAAGCTTTCACGGTTTGCTGTCGGGCCCGGGAAGGAGCGGGGAAGAAGACTCGGCTGACGACAACAGGCCTACTATTTTGCCCGATGGACTGCAGCTGCTACTCTTGCGGTACTTAGTGCTGTCCAACTTTGTAGGCGAAATTTGCAGCCAAACAATCGACATTCAGGGAAGGGTTGGAAATTGCATTCACCAAATTTCGGCCACTATTCCAGTACC AAAGCATCGACGCGAANGTACAGCTGAAGCAGTGAANGAGATCAGAAAATCGACTTGGTATTCGGATGGCACAGAGCCAGAANAAAGTGTATCGCATTACGACGCCTCGACGGGG]
[+] EMBL BM628993             [                                                                                                                                                                                                                                                                      ccgCGACGAGTCGCTCAACAATGCTGCAGCAAGTGCGGCACAGTCCGTGCACCACATAGCAGATATCCTTCAGCGTCCGATTTCCGACGAGCTCATGAAAAAACTGTGCTTCAGCGAACTGCTGCTTGTGTGTGATGGCAGCGAGACCATCGTTGGAGGGGCCGCTATCAACGTCAGCCTGATAGCGGAAGAAGTATTGGCGGCATTTTCCAGCACCAGACTCACAATTCTTGGACATTCTACGGCGGAAAGTGAGCTGATGTCATTTGCGGACCGAAACTGTCGACCGCTGCAGGAGCGCAAATGCGAAACACTCATTTCTGGTACAATCAGGCAGGAGAAACAAATACAACTCTACTTTGATGAGGCCCACAACGTCACAGCTTACAGGCAGGAAAGCAATGGGTTGCAGACCGAAAGCTTTCACGGTTTGCTGTCGGGCCCGGGAAGGAGCGGGGAAGAAGACTCGGCTGACGACAACAGGCCTACTATTTTGCCCGATGGACTGCAGCTGCTACTCTTGCGGTACTTAGTGCTGTCCAACTTTGTAGGCGAAATTTGCAGCCAAACAATCGACATTCAGGGAAGGGTTGGAAATTGCATTCACCAAATTTCGGCCACTATTCCAGTACCAAAAGCATCGACGCGAAGGTACA                                                                                             ]
[+] EMBL BX616620             [                                                                                                                                                                                                                                                                                                                                                             CGAGCTCATGAAAAAACTGTGCTTCAGCGAACTGCTGCTTGTGTGTGATGGCAGCGAGACCATCGTTGGAGGGGCCGCTATCAACGTCAGCCTGATAGCGGAAGAAGTATTGGCGGCATTTTCCAGCACCAGACTCACAATTCTTGGACATTCTACGGCGGAAAGTGAGCTGATGTCATTTGCGGACCGAAACTGTCGACCGCTGCAGGAGCGCAAATGCGAAACGCTCATTTCTGGTACAATCAGGCAGGAGAAACAAATACAACTCTACTTTGATGAGGCCCACAACGTCACTGCTTACAGGCAGGAAAGCAATGGGTTGCAGACCGAAAGCTTTCACGGTTTGCTGTCGGGCCCGGGAAGGAGCGGGGAAGAAGACTCGGCTGACGACAACAGGCCTACTATTTTGCCCGATGGACTGCAGCTGCTACTCTTGCGGTACTTAGTGCTGTCCAACTTTGTAGGCGAAATTTGCAGCCAAACAATCGACAT                                                                                                                                                                          ]
[+] EMBL BX613905             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CGCAAATGCGAAACGCTCATTTCTGGTACAATCAGGCAGGAGAAACAAATACAACTCTACTTTGATGAGGCCCACAACGTCACTGCTTACAGGCAGGAAAGCAATGGGTTGCAGACCGAAAGCTTTCACGGTTTGCTGTCGGGCCCGGGAAGGAGCGGGGAAGAAGACTCGGCTGACGACAACAGGCCTACTATTTTGCCCGATGGACTGCAGCTGCTACTCTTGCGGTACTTAGTGCTGTCCAACTTTGTAGGCGAAATTTGCAGCCAAACAATCGACATTCAGGGAAGGGTTGGAAATTGCATTCACCAAATTTCGGCCACTATTCCAGTACC AAAGCATC                                                                                                           ]
[+] EMBL BX613906             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ATGAGGCCCACAACGTCACTGCTTACAGGCAGGAAAGCAATGGGTTGCAGACCGAAAGCTTTCACGGTTTGCTGTCGGGCCCGGGAAGGAGCGGGGAAGAAGACTCGGCTGACGACAACAGGCCTACTATTTTGCCCGATGGA                                                                                                                                                                                                                                                    ]




>consensus_9174#0
CCGCCCACGCGTCCGCCCACGCGTCCGGTGAAATCGATCGGTACGGAGCCGAGGACCACA
TTCACGTTTTGGCTCTCGCATATAAATTTCGGTACATCGTTCACATTTCTTTTCCGCCCG
TTAGAAGAAAAAAAAAATGTCTTCCAAATCCGCTTTTAATTCCTGCTCCTATGCGCAGAA
CATCGATCGCACAGAAAACCACTCTACAAGAGACCGTCGCGCCGGTAGAAAGCGCGACTA
CGGGTGTAGTCTCACCGGAAGTGTTCGACGAGTCGCTCAACAATGCTGCAGCAAGTGCGG
CACAGTCCGTGCACCACATAGCAGATATCCTTCAGCGTCCGATTTCCGACGAGCTCATGA
AAAAACTGTGCTTCAGCGAACTGCTGCTTGTGTGTGATGGCAGCGAGACCATCGTTGGAG
GGGCCGCTATCAACGTCAGCCTGATAGCGGAAGAAGTATTGGCGGCATTTTCCAGCACCA
GACTCACAATTCTTGGACATTCTACGGCGGAAAGTGAGCTGATGTCATTTGCGGACCGAA
ACTGTCGACCGCTGCAGGAGCGCAAATGCGAAACACTCATTTCTGGTACAATCAGGCAGG
AGAAACAAATACAACTCTACTTTGATGAGGCCCACAACGTCACAGCTTACAGGCAGGAAA
GCAATGGGTTGCAGACCGAAAGCTTTCACGGTTTGCTGTCGGGCCCGGGAAGGAGCGGGG
AAGAAGACTCGGCTGACGACAACAGGCCTACTATTTTGCCCGATGGACTGCAGCTGCTAC
TCTTGCGGTACTTAGTGCTGTCCAACTTTGTAGGCGAAATTTGCAGCCAAACAATCGACA
TTCAGGGAAGGGTTGGAAATTGCATTCACCAAATTTCGGCCACTATTCCAGTACCAAAGC
ATCGACGCGAANGTACAGCTGAAGCAGTGAANGAGATCAGAAAATCGACTTGGTATTCGG
ATGGCACAGAGCCAGAANAAAGTGTATCGCATTACGACGCCTCGACGGGG

consensusID : consensus_9174#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 839
fasta sequence

                              [ATCGCCCGAGGTGAAATCGATCGGTACGGAGCCGAGGA-CACATTCACGTTTTGGCTCTCGCATAGAAATTTCGGTACATCGTTCACATTTCTTTTCCGCCCGTTAG------AAAAAATGTCTTCCAAATCCGCTTTTAATTCCTGCTCCTATGCGCAGGACATCGATCGCACAGAAAGTAGTAAAGTTTTCGAAATTGAACAATGCATGTACAATTTATCAGAGGACTTTTTTCGCCAGACCACTCTACAAGAGACCGTCGCGCCGGTAGAAAGCGCGACTACGGGTGTAGTCTCACCGGAAGTGTTCGACGAGTCGCTCAACAATGCTGCAGCAAGTGCGGCACAGTCCGTGCACCACATAGCAGATATCCTTCAGCGTCCGATTTCCGACGAGCTCATGAAAAAACTGTGCTTCAGCGAACTGCTGCTTGTGTGTGATGGCAGCGAGACCATCGTTGGAGGGGCCGCTATCAACGTCAGCCTGATAGCGGAAGAAGTATTGGCGGCATTTTCCAGCACCAGACTCACAATTCTTGGACATTCTACGGCGGAAAGTGAGCTGATGTCATTTGCGGACCGAAACTGTCGACCGCTGCAGGAGCGCAAATGCGAAACGCTCATTTCTGGTACAATCAGGCAGGAGAAACAAATACAACT-CTACTTTGATGAGGCCCACAACGTCACAGCTTACAGGCAGGAAAGCAATGGGTTGCAGACCGAAAGCTTTCACGGTTTGCTGTCGGGCCCGGGAANGAGCGGGGAAGAAGACTCGGCTGACGACAACAGGCCTACTATTTTGCCCGATGGACTGCAGCTGCTACTCTTGCGGNACTTAGTGCTGTC]

[+] EMBL AL930446             [ATCGCCCGAGGTGAAATCGATCGGTACGGAGCCGAGGA CACATTCACGTTTTGGCTCTCGCATAGAAATTTTGGTACATCGTTCACATTTCTTTTCCGCCCGTTAGAAGAAAAAAAAATGTCTTCCAAATCCGCTTTTAATTCCTGCTCCTATGCGCAGGACATCGATCGCACAGAAAGTAGTAAAGTTTTCGAAATTGAACAATGCATGTACAATTTATCAGAGGACTTTTTTCGCCAGACCACTCTACAAGAGACCGTCGCGCCGGTAGAAAGCGCGACTACGGGTGTAGTCTCACCGGAAGTGTTCGACGAGTCGCTCAACAATGCTGCACCAAGTGCGGCACAGTCCGTGCACCACATAGCAGATATCCTTCAGCGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM576981             [       ccGGTGAAATCGATCGGTACGGAGCCGAGGACCACATTCACGTTTTGGCTCTCGCATAGAAATTTCAGTACATCGTTCACATTTCTTTTCCGCCCGTTAG      AAAAAATGTCTTCCAAATCCGCTTTTAATTCCTGCTCCTATGCGCAGGACATCGATCGCACAGAAAGTAGTAAAGTTTTCGAAATTGAACAATGCATGTACAATTTATCAGAGGACTTTTTTCGCCAGACCACTCTACAAGAGACCGTCTCGCCGGTAGAAAGCGCGACTACAGGTGTACTCTCACCGGAAGTGTTCCACGAGTCGCTCAACAATGCTGCAGCAAGTGCGGCACAGTCCGTGCACCACATAGCGGATATCCTTCGGCGTCCGATTTCCGACGAGCTCATGAAAAAACTGTGCTTCACCGAACTGCTGCTTGTGTGTGATGGCAGCGAGACCATCGTTGGAGGGGCCGCTATCAACGTCAGCCTGATAGCGGAAGAAGTATTGGCGGCATTTTCCAGCACCAGACTCACAATTCTTGGACATTCTACGGCGGAAAGTGAGCTGATGTCATTTGCGGACCGAAACTGTCGACCGCTGCA                                                                                                                                                                                                                                                       ]
[+] EMBL BM593757             [                                                        ccgCGCATAGAAATTTCGGTAGATCGTTCACATTTCTTTTCCGCCCGTTAG      AAAAAATGTCTTCCAAATCCGCTATTAATTCCTGCTCCTATGCGCAGGACATCGATCGCACAGAAAGTAGTAAAGTTTTCGAAATTGAACAATGCATGTACAATTTATCAGAGGACTTTTTTCGCCAGACCACTCTACAAGAGACCGTCGCGCCGGTAGAAAGCGCGACTACGGGTGTAGTCTCACCGGAAGTGTTCGACGAGCCGCTCAACAATGCTGCAGCAAGTGCGGCACAGTCCGTGCACCACATAGCAGATATCCTTCAGCGTCCGATTTCCGACGAGGTCATGAAAAAACTGTGCTTCAGCGAACTGCTGCTTGTGTGTGATGGCAGCGAGACCATCGTTGGAGGGGCCGCTATCAACGTCAGCCTGATAGCGGAAGAAGTATTGGCGGCATTTTCCAGCACCAGACTCACAATTCTTGGACATTCTACGGCGGAAAGTGAGCTGATGTCATTTGCGGACCGAAACTGTCGACCGCTGCAGGAGCGCAAATGCGAAACGCTCATTTCTGGTACAATCAGGCAGGAGAAACAAATACAACT CTACTTTGATGAGGCCCACAACGTCACAGCTTACAGGCAGGAAAGCAATGGG                                                                                                                                      ]
[+] EMBL BX627202             [                                                                      TTCGGTACATCGTTCACATTTCTTTTCCGCCCGTTAG      AAAAAATGTCTTCCAAATCTGCTTTTAATTCCTGCTCCTATGCGCAGGACATCGATCGCACAGAAAGTAGTAAAGTTTTCGAAATTGAACAATGCATGTACAATTTATCAGAGGACTTTTTTCGCCAGACCACTCTACAAGAGACCGTCGCGCCGGTAGAAAGCGCGACTACGGGTGAAGTCTCACCGGAAGTGTTCGACGAGTCGCTCAACAATGCTGCAGCAAGTGCGGCACAGTCCGTGCACCACATAGCAGATATCCTTCAGCGTCCGATTTCCGACGAGCTCATGAAAAAACTGTGCTTCAGCGAACTGCTGCTTGTGTGTGATGGCAGCGAGACCATCGTTGGAGGGGCCGCTATCAACGTCAGCCTGATAGCGGAAGAAGTATTGGCGGCATTTTCCAGTACCAGACTCACAATTCTTGGACATTCTACGGCGGAAAGTGAGCTGATGTCATTTGCGGACCGAAACTGTCGACCGCTGCAGGAGCGCAAATGCGAAACGCTCATTTCTGGTACAATCAGGCAGGAGAAACAAATACAACT CTACTTTGATGAGGCCCACAACGTCACAGCTTACAGGCAGGAAAGCAATGGGTTGCAGACCGAAAGCTTTCACGGTTTGCTGTCGGGCCCGGGAANGAGCGGGGAAGAAGACTCGGCTGACGACAACAGGCCTACTATTTTGCCCGATGGACTGCAGCTGCTACTCTTGCGGNACTTAGTGCTGTC]
[+] EMBL BM618799             [                                                                       cCGGTAGATCGTTCACATTTCTTTTCCGCCCGTTAG      AAAAAATGTCTTCCAAATCCGCTATTAATTCCTGCTCCTATGCGCAGGACATCGATCGCACAGAAAGTAGTAAAGTTTTCGAAATTGAACAATGCATGTACAATTTATCAGAGGACTTTTTTCGCCAGACCACTCTACAAGAGACCGTCGCGCCGGTAGAAAGCGCGACTACGGGTGTAGTCTCACCGGAAGTGTTCGACGAGCCGCTCAACAATGCTGCAGCAAGTGCGGCACAGTCCGTGCACCACATAGCAGATATCCTTCAGCGTCCGATTTCCGACGAGGTCATGAAAAAACTGTGCTTCAGCGAACTGCTGCTTGTGTGTGATGGCAGCGAGACCATCGTTGGAGGGGCCGCTATCAACGTCAGCCTGATAGCGGAAGAAGTATTGGCGGCATTTTCCAGCACCAGACTCACAATTCTTGGACATTCTACGGCGGAAAGTGAGCTGATGTCATTTGCGGACCGAAACTGTCGACCGCTGCAGGAGCGCAAATGCGAAACGCTCATTTCTGGTACAATCAGGCAGGAGAAACAAATACAACTCCTACTTTGATGAGGCCCACAACGTCACAGC                                                                                                                                                            ]




>consensus_9174#1
ATCGCCCGAGGTGAAATCGATCGGTACGGAGCCGAGGACACATTCACGTTTTGGCTCTCG
CATAGAAATTTCGGTACATCGTTCACATTTCTTTTCCGCCCGTTAGAAAAAATGTCTTCC
AAATCCGCTTTTAATTCCTGCTCCTATGCGCAGGACATCGATCGCACAGAAAGTAGTAAA
GTTTTCGAAATTGAACAATGCATGTACAATTTATCAGAGGACTTTTTTCGCCAGACCACT
CTACAAGAGACCGTCGCGCCGGTAGAAAGCGCGACTACGGGTGTAGTCTCACCGGAAGTG
TTCGACGAGTCGCTCAACAATGCTGCAGCAAGTGCGGCACAGTCCGTGCACCACATAGCA
GATATCCTTCAGCGTCCGATTTCCGACGAGCTCATGAAAAAACTGTGCTTCAGCGAACTG
CTGCTTGTGTGTGATGGCAGCGAGACCATCGTTGGAGGGGCCGCTATCAACGTCAGCCTG
ATAGCGGAAGAAGTATTGGCGGCATTTTCCAGCACCAGACTCACAATTCTTGGACATTCT
ACGGCGGAAAGTGAGCTGATGTCATTTGCGGACCGAAACTGTCGACCGCTGCAGGAGCGC
AAATGCGAAACGCTCATTTCTGGTACAATCAGGCAGGAGAAACAAATACAACTCTACTTT
GATGAGGCCCACAACGTCACAGCTTACAGGCAGGAAAGCAATGGGTTGCAGACCGAAAGC
TTTCACGGTTTGCTGTCGGGCCCGGGAANGAGCGGGGAAGAAGACTCGGCTGACGACAAC
AGGCCTACTATTTTGCCCGATGGACTGCAGCTGCTACTCTTGCGGNACTTAGTGCTGTC

consensusID : consensus_9174#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 679
fasta sequence

                              [CCGCCCACGCGTCCGCCCACGCGTCCGGGAGAAACAAATACAACTCTACTTTGATGAGGCCCACAACGTCACAGCTTACAGGCAGGAAAGCAATGGGTTGCAGACCGAAAGCTTTCACGGTTTGCTGTCGGGCCCGGGAAGGAGCGGGGAAGAAGATTCGGCTGACGACAACAGGCCTACTATTTTGCCCGATGGACTGCAGCTGCTACTCTTGCGGTACTTAGTCTGTCCAACTTTGTAGGCGAAATTTGCAGCCAAACAATCGACATTCAGGGAAGGGTTGGAAATTGCATTCACCAAATTTCGGCCACTATTCCAGTACCAAAGCATCGACGCGAAGGTACAGCTGAAGCAGTGAAGGAGATCAGAAAATCGACTTGGTATTCGGATGGCACAGAGCCAGAAGAAAGTGTATCGCATTACGACGCCTCGACGGGGCGTTTGCTGCGGCACGGTTGGAATAGTTCAAACTACATCCTCATTGAAAACCCGCTCGGTACGGCATCCCCAATGGCCGTAAAAGAACTCGAGCAAGGTATGAAAGATTACGTGCAAACCTTATCGGGATTGATTAAAAACCGAGCGTCGGTGAAAGAGATGATCGACCATGTGGATTGCACAGTGAAAGAGATGGATCAGTGCAACAAAATTGTAAATCCACTACTGAGAGATATCATTA]

[+] EMBL BM636410             [CCGCCCACGCGTCCGCCCACGCGTCCGGGAGAAACAAATACAACTCTACTTTGATGAGGCCCACAACGTCACAGCTTACAGGCAGGAAAGCAATGGGTTGCAGACCGAAAGCTTTCACGGTTTGCTGTCGGGCCCGGGAAGGAGCGGGGAAGAAGATTCGGCTGACGACAACAGGCCTACTATTTTGCCCGATGGACTGCAGCTGCTACTCTTGCGGTACTTAGTCTGTCCAACTTTGTAGGCGAAATTTGCAGCCAAACAATCGACATTCAGGGAAGGGTTGGAAATTGCATTCACCAAATTTCGGCCACTATTCCAGTACCAAAGCATCGACGCGAAGGTACAGCTGAAGCAGTGAAGGAGATCAGAAAATCGACTTGGTATTCGGATGGCACAGAGCCAGAAGAAAGTGTATCGCATTACGACGCCTCGACGGGGCGTTTGCTGCGGCACGGTTGGAATAGTTCAAACTACATCCTCATTGAAAACCCGCTCGGTACGGCATCCCCAATGGCCGTAAAAGAACTCGAGCAAGGTATGAAAGATTACGTGCAAACCTTATCGGGATTGATTAAAAACCGAGCGTCGGTGAAAGAGATGATCGACCATGTGGATTGCACAGTGAAAGAGATGGATCAGTGCAACAAAATTGTAAATCCACTACTGAGAGATATCATTA]




>consensus_9174#2
CCGCCCACGCGTCCGCCCACGCGTCCGGGAGAAACAAATACAACTCTACTTTGATGAGGC
CCACAACGTCACAGCTTACAGGCAGGAAAGCAATGGGTTGCAGACCGAAAGCTTTCACGG
TTTGCTGTCGGGCCCGGGAAGGAGCGGGGAAGAAGATTCGGCTGACGACAACAGGCCTAC
TATTTTGCCCGATGGACTGCAGCTGCTACTCTTGCGGTACTTAGTCTGTCCAACTTTGTA
GGCGAAATTTGCAGCCAAACAATCGACATTCAGGGAAGGGTTGGAAATTGCATTCACCAA
ATTTCGGCCACTATTCCAGTACCAAAGCATCGACGCGAAGGTACAGCTGAAGCAGTGAAG
GAGATCAGAAAATCGACTTGGTATTCGGATGGCACAGAGCCAGAAGAAAGTGTATCGCAT
TACGACGCCTCGACGGGGCGTTTGCTGCGGCACGGTTGGAATAGTTCAAACTACATCCTC
ATTGAAAACCCGCTCGGTACGGCATCCCCAATGGCCGTAAAAGAACTCGAGCAAGGTATG
AAAGATTACGTGCAAACCTTATCGGGATTGATTAAAAACCGAGCGTCGGTGAAAGAGATG
ATCGACCATGTGGATTGCACAGTGAAAGAGATGGATCAGTGCAACAAAATTGTAAATCCA
CTACTGAGAGATATCATTA

consensusID : consensus_9174#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 562
fasta sequence

                              [CCGCGGACGCGTGGGCAGTGAAATCGATCGGTACGGAGCCGAGGACCACATTCACGTTTTGGCTCTCGCATATAAATTTCGACCACTCTACAAGAGACCGTCGCGCCGGTAGAAAGCGCGACTACGGGTGTAGTCTCACCGGAAGTGTTCGACGAGTCGCTCAACAATGCTGCAGCAAGTGCGGCACAGTCCGTGCACCACATAGCAGATATCCTTCAGCGTCCGATTTCCGACGAGCTCATGAAAAAACTGTGCTTCAGCGAACTGCTGCTTGTGTGTGATGGCAGCGAGACCATCGTTGGAGGGGCCGCTATCAACGTCAGCCTGATAGCGGAAGAAGTATTGGCGGCATTTTCCAGCACCAGACTCACAATTCTTGGACATTCTACGGCGGAAAGTGAGCTGATGTCATTTGCGGACCGAAACTGTCGACCGCTGCAGGAGCGCAAATGCGAAACACTCATTTCTGGTACAATCAGGCAGGAGAAACAAATACAACTCTACTTTGATGAGGGCCACAACGTCACAGCTTACAGGCAGGAAAGCAATGGGGTTGCAGACC]

[+] EMBL BM616034             [CCGCGGACGCGTGGGCAGTGAAATCGATCGGTACGGAGCCGAGGACCACATTCACGTTTTGGCTCTCGCATATAAATTTCGACCACTCTACAAGAGACCGTCGCGCCGGTAGAAAGCGCGACTACGGGTGTAGTCTCACCGGAAGTGTTCGACGAGTCGCTCAACAATGCTGCAGCAAGTGCGGCACAGTCCGTGCACCACATAGCAGATATCCTTCAGCGTCCGATTTCCGACGAGCTCATGAAAAAACTGTGCTTCAGCGAACTGCTGCTTGTGTGTGATGGCAGCGAGACCATCGTTGGAGGGGCCGCTATCAACGTCAGCCTGATAGCGGAAGAAGTATTGGCGGCATTTTCCAGCACCAGACTCACAATTCTTGGACATTCTACGGCGGAAAGTGAGCTGATGTCATTTGCGGACCGAAACTGTCGACCGCTGCAGGAGCGCAAATGCGAAACACTCATTTCTGGTACAATCAGGCAGGAGAAACAAATACAACTCTACTTTGATGAGGGCCACAACGTCACAGCTTACAGGCAGGAAAGCAATGGGGTTGCAGACC]




>consensus_9174#3
CCGCGGACGCGTGGGCAGTGAAATCGATCGGTACGGAGCCGAGGACCACATTCACGTTTT
GGCTCTCGCATATAAATTTCGACCACTCTACAAGAGACCGTCGCGCCGGTAGAAAGCGCG
ACTACGGGTGTAGTCTCACCGGAAGTGTTCGACGAGTCGCTCAACAATGCTGCAGCAAGT
GCGGCACAGTCCGTGCACCACATAGCAGATATCCTTCAGCGTCCGATTTCCGACGAGCTC
ATGAAAAAACTGTGCTTCAGCGAACTGCTGCTTGTGTGTGATGGCAGCGAGACCATCGTT
GGAGGGGCCGCTATCAACGTCAGCCTGATAGCGGAAGAAGTATTGGCGGCATTTTCCAGC
ACCAGACTCACAATTCTTGGACATTCTACGGCGGAAAGTGAGCTGATGTCATTTGCGGAC
CGAAACTGTCGACCGCTGCAGGAGCGCAAATGCGAAACACTCATTTCTGGTACAATCAGG
CAGGAGAAACAAATACAACTCTACTTTGATGAGGGCCACAACGTCACAGCTTACAGGCAG
GAAAGCAATGGGGTTGCAGACC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9174#1      ATCGCCCGAGGTGAAATCGATCGGTACGGAGCCGAGGACACATTCACGTTTTGGCTCTCG 60
consensus_9174#3      ------------------------------------------------------------
consensus_9174#0      ---------------------------------------------CCGCCCACGCGTCCG 15
consensus_9174#2      ------------------------------------------------------------
                                                                                  

consensus_9174#1      CATAGAAATTTCGGTACATCGTTCACATTTCTTTTCCGCCCGTTAGAAAAAATGTCTTCC 120
consensus_9174#3      ------------------------------------------------------------
consensus_9174#0      CCCACGCGTCCGGTGAAATCGATCGGTACGGAGCCGAGGACCACATTCACGTTTTGGCTC 75
consensus_9174#2      ------------------------------------------------------------
                                                                                  

consensus_9174#1      AAATCCGCTTTTAATTCCTGCTCCTATGCGCAGGACATCGATCGCACAGAAAGTAGTAAA 180
consensus_9174#3      -----------------------------------CCGCGGACGCGTGGGCAGTGAAATC 25
consensus_9174#0      TCGCATATAAATTTCGGTACATCGTTCACATTTCTTTTCCGCCCGTTAGAAGAAAAAAAA 135
consensus_9174#2      -------------------CCGCCCACGCGTCCGCCCACGCGTCCGGGAGAAACAAATAC 41
                                                            *                     

consensus_9174#1      GTT---TTCGAAATTGAACAATGCAT--GTACAATTTATCAGAGGACTT----TTTTCGC 231
consensus_9174#3      GATCGGTACGGAGCCGAGGACCACAT--TCACGTTTTGGCTCTCGCATA----TAAATTT 79
consensus_9174#0      AATGTCTTCCAAATCCGCTTTTAATT--CCTGCTCCTATGCGCAGAACA----TCGATCG 189
consensus_9174#2      AACT-CTACTTTGATGAGGCCCACAACGTCACAGCTTACAGGCAGGAAAGCAATGGGTTG 100
                            * *                           *       *        *      

consensus_9174#1      CA-----GACCACTCTACAAGAGACCGTCGCGCC-GGTAGAAAGCGCGACTACGGGTGTA 285
consensus_9174#3      C------GACCACTCTACAAGAGACCGTCGCGCC-GGTAGAAAGCGCGACTACGGGTGTA 132
consensus_9174#0      CACAGAAAACCACTCTACAAGAGACCGTCGCGCC-GGTAGAAAGCGCGACTACGGGTGTA 248
consensus_9174#2      CAGACCGAAAGCTTTCACGGTTTGCTGTCGGGCCCGGGAAGGAGCGGGGAAGAAGAT-TC 159
                      *       *    *  **      * **** *** ** *   **** *      * * * 

consensus_9174#1      GTCTCACCGGAAGTGTTCGACGAGTC-GCTCAACAAT-----GCTGCAGCAAGTGCGGCA 339
consensus_9174#3      GTCTCACCGGAAGTGTTCGACGAGTC-GCTCAACAAT-----GCTGCAGCAAGTGCGGCA 186
consensus_9174#0      GTCTCACCGGAAGTGTTCGACGAGTC-GCTCAACAAT-----GCTGCAGCAAGTGCGGCA 302
consensus_9174#2      GGCTGACGACAACAGGCCTACTATTTTGCCCGATGGACTGCAGCTGCTACTCTTGCGGTA 219
                      * ** **   **  *  * ** * *  ** * *         *****  *   ***** *

consensus_9174#1      C--AGTCCGTGCA-CCACATAGCAGATATCCTTCAGCGTCCGATTTCCGACGAGCTCATG 396
consensus_9174#3      C--AGTCCGTGCA-CCACATAGCAGATATCCTTCAGCGTCCGATTTCCGACGAGCTCATG 243
consensus_9174#0      C--AGTCCGTGCA-CCACATAGCAGATATCCTTCAGCGTCCGATTTCCGACGAGCTCATG 359
consensus_9174#2      CTTAGTCTGTCCAACTTTGTAGGCGAAATTTGCAGCCAAACAATCGACATTCAGGGAAGG 279
                      *  **** ** ** *    ***  ** **       *   * **   *    **   * *

consensus_9174#1      A--AAAAACTGTGCTTCAGCGAACTGCTGCTTGTGTGTGATGGCAGCGAGACCATCGTTG 454
consensus_9174#3      A--AAAAACTGTGCTTCAGCGAACTGCTGCTTGTGTGTGATGGCAGCGAGACCATCGTTG 301
consensus_9174#0      A--AAAAACTGTGCTTCAGCGAACTGCTGCTTGTGTGTGATGGCAGCGAGACCATCGTTG 417
consensus_9174#2      GTTGGAAATTGCA-TTCACCAAATTTCGGCCACTATTCCAGTACCAAAGCATCGACGC-G 337
                           *** **   **** * ** * * **   * *   *   *      * *  **  *

consensus_9174#1      GAGGGGCCGCTATCAACGTCAGCCTGATAGCGGAA--GAAGTATTGGCGGCATTTTCCAG 512
consensus_9174#3      GAGGGGCCGCTATCAACGTCAGCCTGATAGCGGAA--GAAGTATTGGCGGCATTTTCCAG 359
consensus_9174#0      GAGGGGCCGCTATCAACGTCAGCCTGATAGCGGAA--GAAGTATTGGCGGCATTTTCCAG 475
consensus_9174#2      AAGGTACAGCTGAAGCAGTGAAGGAGATCAGAAAATCGACTTGGTATTCGGATGGCACAG 397
                       ***  * ***      ** *    ***     **  **  *  *    * **    ***

consensus_9174#1      CACCAGACTCACAATTCTTGGAC----ATTCTACGGCGGAAAGTGAGCTGATGT-CATTT 567
consensus_9174#3      CACCAGACTCACAATTCTTGGAC----ATTCTACGGCGGAAAGTGAGCTGATGT-CATTT 414
consensus_9174#0      CACCAGACTCACAATTCTTGGAC----ATTCTACGGCGGAAAGTGAGCTGATGT-CATTT 530
consensus_9174#2      AGCCAGAAGAAAGTGTATCGCATTACGACGCCTCGACGGGGCGTTTGCTGCGGCACGGTT 457
                        *****   *    * * * *     *  *  ** ***   **  ****  *  *  **

consensus_9174#1      GCGG--ACCGAAACTGTCGAC-CGCTGCAGGAGCGCA-AATGCGAAACGCTCATTTCTGG 623
consensus_9174#3      GCGG--ACCGAAACTGTCGAC-CGCTGCAGGAGCGCA-AATGCGAAACACTCATTTCTGG 470
consensus_9174#0      GCGG--ACCGAAACTGTCGAC-CGCTGCAGGAGCGCA-AATGCGAAACACTCATTTCTGG 586
consensus_9174#2      GGAATAGTTCAAACTACATCCTCATTGAAAACCCGCTCGGTACGGCATCCCCAATGGCCG 517
                      *         *****     * *  ** *    ***    * **  *  * ** *    *

consensus_9174#1      TACAATCAGGCAGGAGAAACAAATACAACTCTACTTTGATGAGGCCCACAACGTCACAGC 683
consensus_9174#3      TACAATCAGGCAGGAGAAACAAATACAACTCTACTTTGATGAGGGCCACAACGTCACAGC 530
consensus_9174#0      TACAATCAGGCAGGAGAAACAAATACAACTCTACTTTGATGAGGCCCACAACGTCACAGC 646
consensus_9174#2      TAAAA--GAACTCGAGCAAGGTATGAAAGATTAC----GTGCAAACCTTATCGGGATTGA 571
                      ** **     *  *** **   **  **   ***     **    **  * **  *  * 

consensus_9174#1      TTACAGGCAGGAAAGCAATGGG-TTGCAGACCGAAAGCTTTCACGGTTTGCTGTCGGGCC 742
consensus_9174#3      TTACAGGCAGGAAAGCAATGGGGTTGCAGACC---------------------------- 562
consensus_9174#0      TTACAGGCAGGAAAGCAATGGG-TTGCAGACCGAAAGCTTTCACGGTTTGCTGTCGGGCC 705
consensus_9174#2      TTAAAAACCGAGCGTCGGTGAAAGAGATGATCGACCATGTGGATTGCACAGTGAAAGAGA 631
                      *** *  * *     *  **     *  ** *                            

consensus_9174#1      CGGGAANGAGCGGGGAAGAAGACTCGGCTGACGACAACAGGCCTACTATTTTGCCCGATG 802
consensus_9174#3      ------------------------------------------------------------
consensus_9174#0      CGGGAAGGAGCGGGGAAGAAGACTCGGCTGACGACAACAGGCCTACTATTTTGCCCGATG 765
consensus_9174#2      TGGATCAGTGCAACAAAATTGTAAATCCACTACTGAGAGATATCATTA------------ 679
                                                                                  

consensus_9174#1      GACTGCAGCTGCTACTCTTGCGGNACTTAGTGCTGTC----------------------- 839
consensus_9174#3      ------------------------------------------------------------
consensus_9174#0      GACTGCAGCTGCTACTCTTGCGGTACTTAGTGCTGTCCAACTTTGTAGGCGAAATTTGCA 825
consensus_9174#2      ------------------------------------------------------------
                                                                                  

consensus_9174#1      ------------------------------------------------------------
consensus_9174#3      ------------------------------------------------------------
consensus_9174#0      GCCAAACAATCGACATTCAGGGAAGGGTTGGAAATTGCATTCACCAAATTTCGGCCACTA 885
consensus_9174#2      ------------------------------------------------------------
                                                                                  

consensus_9174#1      ------------------------------------------------------------
consensus_9174#3      ------------------------------------------------------------
consensus_9174#0      TTCCAGTACCAAAGCATCGACGCGAANGTACAGCTGAAGCAGTGAANGAGATCAGAAAAT 945
consensus_9174#2      ------------------------------------------------------------
                                                                                  

consensus_9174#1      ------------------------------------------------------------
consensus_9174#3      ------------------------------------------------------------
consensus_9174#0      CGACTTGGTATTCGGATGGCACAGAGCCAGAANAAAGTGTATCGCATTACGACGCCTCGA 1005
consensus_9174#2      ------------------------------------------------------------
                                                                                  

consensus_9174#1      -----
consensus_9174#3      -----
consensus_9174#0      CGGGG 1010
consensus_9174#2      -----