These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9204#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1615 fasta sequence [GAGGCCAAAGCATTTCATGACTACGGTTTCGTGAGTTCAGGGTACGGAGTGAACGGAATAGCACACAATGCCGGCCCGGCACCGAGCCCACTGGGACAGTTACCACCAAACGAAGGCATGCCCGGCGGCCCGATGGCTCCTTCAGGCTTCTTTCCGAACTCCTCCATTAGGCCATCACAACCTTCACACCCTAGTAGTCAGCAGTCCCCACATCCACAGCCTCCAAACTCGCATGGACAATTGATGAGCGGTCAGCCGTTCATGGGTGGCCCCCGATATCCACCAGGACCCAGGCCGGGAGTGAGAATGCCGCAAGGAATTGGAAACGATTTCAATGGTCCCCCCGGACAACCAATGATGCCAAATAGTATGGATCCGACGCGGCAAGGTATGGGTCCCATGAATCCTAGAATGAATCCACCTCGCGGCCCGGGCATGGGCCCCATGGGAGCGGGCACGTACGGTCCAGGAATGCGCGGTCCCCCACCAAACAGCAGTTTAGGACCGGGCGGTATGCCACCGATGGGTATGGCCGGCGGTCGGCCACAGTGGCAACCGAACACGTCATCGCCGATGAACTACTCGTCGTCCTCGCCCGGCAACTACGGCGGACCGCCGGGACCGAGCGGGCCCCCTGGACCGGGTACGCCCATCATGCCATCACCTCAAGATTCATCCAACTCCGGCGGCGAAAACATGTACACACCAATGAAACCTGAATTCCCTATGGTCGGCGGCACGGACGGCAGCGGCCCGATGGGTGGACCGATGGGCCCGAACACGATGGGCGGCCCGGTACTTAATAACGATGGTTTGGACGGCATGAAGAACAGCCCCGCGAACGGTCCGGGCACGCCACGGGAAGACTCCGGCAGCGGTATGGGCGATTACAACCTCGGCGGCTTCGGTGGTCCCGGCGAGAACGATCAAACCGAATCGGCCGCTATACTGAAAATAAAGGAAAGCATGCAGGAGGAGGCAAAGCGTTTCGAGAAAGACTCGGACCAGCCCGACTACTATATGCAATAACATCCTCCTTCTCCTACCGCTACTACAGCCGCTACTAGTACTTCTTCTATTACTTCTGTTATCGAATCTAGTAGTACTGATATCGTAAAGGCAATCTATACTAGTACTACTTTTACCATTACCAGCACTATCACTATCGACAGCATTGGCAGCCTTGCCATCATGATCATTATGATCGTCGTCGCTACCACGATCGCCACTACCACTGGGCACTACTACTACTACTACTACTATCACCAGCAGCAGCAGCAGCAGCATCATCAACAACAACAACACAGACGCACGATGATCATCAGTGGCAAACCAATGTGTGCAATGGCAAACCATGCTTCTGTAACAGCTGGTACCCTCCCCCAAGTGGATTTTATTAATCACTCACCACCACCAGCAGCACAACGACACCGATCGGTTCACGAGTCACGTCACTGTAGGTGAATACGTAAATTTGTTGATGCAAAACGAGTACCAAACGGTATCATCACGCTGTCTGTGTCTGTACCCCGTTGATGCGTCTGTATCTCACCACCATTGGAAGGATTATGCGAAGAAGAAGAAGAAAAAAACCTGCAAATAAGACTTGCTCTGC] [+] EMBL CNS08HAY [GAGGCCAAAGCATTTCATGACTACGGTTTCGTGAGTTCAGGGTACGGAGTGAACGGAATAGCACACAATGCCGGCCCGGCACCGAGCCCACTGGGACAGTTACCACCAAACGAAGGCATGCCCGGCGGCCCGATGGCTCCTTCAGGCTTCTTTCCGAACTCCTCCATTAGGCCATCACAACCTTCACACCCTAGTAGTCAGCAGTCCCCACATCCACAGCCTCCAAACTCGCATGGACAATTGATGAGCGGTCAGCCGTTCATGGGTGGCCCCCGATATCCACCAGGACCCAGGCCGGGAGTGAGAATGCCGCAAGGAATTGGAAACGATTTCAATGGTCCCCCCGGACAACCAATGATGCCAAATAGTATGGATCCGACGCGGCAAGGTATGGGTCCCATGAATCCTAGAATGAATCCACCTCGCGGCCCGGGCATGGGCCCCATGGGAGCGGGCACGTACGGTCCAGGAATGCGCGGTCCCCCACCAAACAGCAGTTTAGGACCGGGCGGTATGCCACCGATGGGTATGGCCGGCGGTCGGCCACAGTGGCAACCGAACACGTCATCGCCGATGAACTACTCGTCGTCCTCGCCCGGCAACTACGGCGGACCGCGGGGACCGAGCGGGCCCCCTGGACCGGGTACGCCCATCATGCCATCACCTCAAGATTCATCCAACTCCGGCGGCGAAAACATGTACACACCAATGAAACCTGAATTCCCTATGGTCGGCGGCACGGACGGCAGCGGCCCGATGGGTGGACCGATGGGCCCGAACACGATGGGCGGCCCGGTACTTAATAACGATGGTTTGGACGGCATGAAGAACAGCCCCGCGAACGGTCCGGGCACGCCACGGGAAGACTCCGGCAGCGG ] [+] EMBL BM624950 [ ccgGAATCCACCTCGCGGCCCGGGCATGGGCCCCATGGGAGCGGGCACGTACGGTCCAGGAATGCGCGGTCCCCCACCAAACAGCAGTTTAGGACCGGGCGGTATGCCACCGATGGGTATGGCCGGCGGTCGGCCACAGTGGCAACCGAACACGTCATCGCCGATGAACTACTCGTCGTCCTCGCCCGGCAACTACGGCGGACCGCCGGGACCGAGCGGGCCCCCTGGACCGGGTACGCCCATCATGCCATCACCTCAAGATTCATCCAACTCCGGCGGCGAAAACATGTACACACCAATGAAACCTGAATTCCCTATGGTCGGCGGCACGGACGGCAGCGGCCCGATGGGTGGACCGATGGGCCCGAACACGATGGGCGGCCCGGTACTTAATAACGATGGTTTGGACGGCATGAAGAACAGCCCCGCGAACGGTCCGGGCACGCCACGGGAAGACTCCGGCAGCGGTATGGGCGATTACAACCTCGGCGGCTTCGGTGGTCCCGGCGAGAACGATCAAACCGAATCGGCCGCTATACTGAAAATAAAGGAAAGCATGCAGGAGGAGGCAAAGCGTTTCGAGAAAGACTCGGACCAGCCCGACTACTATATGCAATAACATCCTCCTTCTCCTACCGCTACTACAGCCGCTA ] [+] EMBL BM580073 [ ccgCGATGGGTATGGCCGGCGGTCGGCCACAGTGGCAACCGAACACGTCATCGCCGATGAACTACTCGTCGTCCTCGCCCGGCAACTACGGCGGACCGCCGGGACCGAGCGGGCCCCCTGGACCGGGTACGCCCATCATGCCATCACCTCAAGATTCATCCAACTCCGGCGGCGAAAACATGTACACACCAATGAAACCTGAATTCCCTATGGTCGGCGGCACGGACGGCAGCGGCCCGATGGGTGGACCGATGGGTCCGAACACGATGGGCGGCCCGGTACTTAATAACGATGGTTTGGACGGCATGAAGAACAGCCCCGCGAACGGTCCGGGCACGCCACGGGAAGACTCCGGCAGCGGTATGGGCGATTACAACCTCGGCGGCTTCGGTGGTCCCGGCGAGAACGACCAAACCGAATCGGCCGCTATACTGAAAATAAAGGAAAGCATGCAGGAGGAGGCAAAGCGTTTCGAGAAAGACTCGGACCAGCCCGACTACTATATGCAATAACATCCTCCTTCTCCTACCGCTACTACAGCCGCTACTAGTACTTCTTCTATTACTTCTGTTATCGAATCTAGTAGTACTGATA ] [+] EMBL BM615670 [ ccgGGCAAAGCGTTTCGAGAAAGACTCGGACCAGCCCGACTACTATATGCAATAACATCCTCCTTCTCCTACCGCTACTACAGCCGCTACTAGTACTTCTTCTATTACTTCTGTTATCGAATCTAGTAGTACTGATATCGTAAAGGCAATCTATACTAGTACTACTTTTACCATTACCAGCACTATCACTATCGACAGCATTGGCAGCCTTGCCATCATGATCATTATGATCGTCGTCGCTACCACGATCGCCACTACCACTGGGCACTACTACTACTACTACTACTATCACCAGCAGCAGCAGCAGCAGCATCATCAACAACAACAACACAGACGCACGATGATCATCAGTGGCAAACCAATGTGTGCAATGGCAAACCATGCTTCTGTAACAGCTGGTACCCTCCCCCAAGTGGATTTTATTAATCACTCACCACCACCAGCAGCACAACGACACCGATCGGTTCACGAGTCACGTCACTGTAGGTGAATACGTAAATTTGTTGATGCAAAACGAGTACCAAACGGTATCATCACGCTGTCTGTGTCTGTACCCCGTTGATGCGTCTGTATCTCACCACCATTGGAAGGATTATGCGAAGAAGAAGAAGAAAAAAACCTGCAAATAAGACTTGCTCTGC] consensusID : consensus_9204#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1534 fasta sequence [TTCTGGACTCTCCATGCAGATGAAGCAAGATCAACAGCAGATGATTCCGGAAAAGAAAAAGTGGATTCACGACCCTTCAAGTGATCTCTGCAAACCGCTCAACTGCAAGAAGAAAGAGCTCTGCCTGCTGGAGGACGCGTACACGGCTGTCTGCGTTTCGAAGAAGGAACTCCACAAGAACAAATTCATCAGCAGCAGCCTTGCCATCATGATCATTATGATCGTCGTCGCTACCACGATCGCCACTACCACTGGGCACTACTACTACTACTACTACTATCACCAGCAGCAGCAGCAGCAGCATCATCAACAACAACAACACAGACGCACGATGATCATCAGTGGCAAACCAATGTGTGCAATGGCAAACCATGCTTCTGTAACAGCTGGTACCCTCCCCCAAGTGGATTTTATTAATCACTCACCACCACCAGCAGCACAACGACACCGATCGGTTCACGAGTCACGTCACTGTAGGTGAATACGTAAATTTGTTGATGCAAAACGAGTACCAAACGGTATCATCACGCTGTCTGTGTCTGTACCCCGTTGATGCGTCTGTATCTCACCACCATTGGAAGGATTAGGCGAAGAAGAAGAAGAAAAAAACCTGCAAATAAGACTTGCTCTGCAGAGTGTGTGCGTGCGTTTGGGGCGATTGGGATGGCGAAGATTGATAATAATATGGCTGGGTTCTGGGTTCTCTATGGGTGTGACTGGGTTGTGTGGCTGCTAGACATAGACACACATACACACATTTTTACCAAAAAGAAGCAAAACTATAAAAAATATTACACAAAAAAAGAGAAAGAGACAAAACAGAGCGAAAGCAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACGAGGGAAAAACGTCAAACTGGTTGAGCATAATGATAGCAGAAACAGAAAGGAAAAGAAAGGCAGAGAGAAAGATAGTTGAAAGTTGAATATATAAAACGCGATGTATTCTAATGATAAAACCGGTAAAAAAAGAAACCAATTCACTCTTAAGTTTTCTTAGATTGTTACACAAAGACAGAGAAGGGAGAAAAAGCACGAAGCTGATAGAGAGAAAGAGAGAGAGAGAGGGACACTCCTATACCCCCAATCAAGAAGGAAGAGAGAGAGAGAAAAGAGGACCCATAAAAAGATCAAGTAATCGTTCATTGCCGTCGGGTCATCTCGTGAGTCCGGGCGGAGTGTGCAGGGATTGACGTTTGCTACAAGCATCTCGACAATTTGGAACAGGAAAGCGTACCACAACGAATCGAATTCGTGTGCGTGACAGAAGGAAACTTACCATGCTTTGACCGCCCATTACTCGAAACTTTTTCTTTCGAGTTACCAATCCATCTCCGATCGATTGCGCGTGGCAAAAGTTGCTCTTTTAAGCGACAAAATGCAAATTGTATGCCAAGAAAGGCTTAAAAAGGTGGCCCTCTTACACGTTGAGCGGGAAGCATGTGTTTGGAAGAGTGTGAGGTGGTGTGTGTGTTGCGGACACAAACACAGAATAGGAATTTAAACCTC] [+] EMBL BX608297 [TTCTGGACTCTCCATGCAGATGAAGCAAGATCAACAGCAGATGATTCCGGAAAAGAAAAAGTGGATTCACGACCCTTCAAGTGATCTCTGCAAACCGCTCAACTGCAAGAAGAAAGAGCTCTGCCTGCTGGAGGACGCGTACACGGCTGTCTGCGTTTCGAAGAAGGAACTCCACAAGAACAAATTCATCAGCAGCAGCCTTGCCATCATGATCATTATGATCGTCGTCGCTACCACGATCGCCACTACCACTGGGCACTACTACTACTACTACTACTATCACCAGCAGCAGCAGCAGCAGCATCATCAACAACAACAACACAGACGCACGATGATCATCAGTGGCAAACCAATGTGTGCAATGGCAAACCATGCTTCTGTAACAGCTGGTACCCTCCCCCAAGTGGATTTTATTAATCACTCACCACCACCAGCAGCACAACGACACCGATCGGTTCACGAGTCACGTCACTGTAGGTGAATACGTAAATTTGTTGATGCAAAACGAGTACCAAACGGTATCATCACGCTGTCTGTGTCTGTACCCCGTTGATGCGTCTGTATCTCACCACCATTGGAAGGATTAGGCGAAGAAGAAGAAGAAAAAAACCTGCAAATAAGACTTGCTCTGCAGAGTGTGTGCGTGCGTTTGGGGCGATTGGGATGGCGAAGATTGATAATAATATGGCTGGGTTCTGGGTTCTCTATGGGTGTGACTGGGTTGTGTGGCTGCTAGACATAGACACACATACACACATTTTTACCAAAAAGAAGCAAAACTATAAAA ] [+] EMBL BX605128 [ CGTTTGGGGCGATTGGGATGGCGAAGATTGATAATAATATGGCTGGGTTCTGGGTTCTCTATGGGTGTGACTGGGTTGTGTGGCTGCTAGACATAGACACACATACACACATTTTTACCAAAAAGAAGCAAAACTATAAAAAATATTACACAAAAAAAGAGAAAGAGACAAAACAGAGCGAAAGCAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACGAGGGAAAAACGTCAAACTGGTTGAGCATAATGATAGCAGAAACAGAAAGGAAAAGAAAGGCAGAGAGAAAGATAGTTGAAAGTTGAATATATAAAACGCGATGTATTCTAATGATAAAACCGGTAAAAAAAGAAACCAATTCACTCTTAAGTTTTCTTAGATTGTTACACAAAGACAGAGAAGGGAGAAAAAGCACGAAGCTGATAGAGAGAAAGAGAGAGAGAGAGGGACACTCCTATACCCCCAATCAAGAAGGAAGAGAGAGAGAGAAAAGAGGACCCATAAAAAGATCAAGTAATCGTTCATTGCCGTCGGGTCATCTCGTGAGTCCGGGCGGAGTGTGCAGGGATTGACGTTTGCTACAAGCATCTCGACAATTTGGAACAGGAAAGCGTACCACAACGAATCGAATTCGTGTGCGTGACAGAAGGAAACTTACCATGCTTTGACCGCCCATTACTCGAAACTTTTTCTTTCGAGTT ] [+] EMBL BX616006 [ GAGAGAGAGAGAGAGAGAGAAACGAGGGAAAAACGTCAAACTGGTTGAGCATAATGATAGCAGAAACAGAAAGGAAAAGAAAGGCAGAGAGAAAGATAGTTGAAAGTTGAATATATAAAACGCGATGTATTCTAATGATAAAACCGGTAAAAAAAGAAACCAATTCACTCTTAAGTTTTCTTAGATTGTTACACAAAGACAGAGAAGGGAGAAAAAGCACGAAGCTGATAGAGAGAAAGAGAGAGAGAGAGGGACACTCCTATACCCCCAATCAAGAAGGAAGAGAGAGAGAGAAAAGAGGACCCATAAAAAGATCAAGTAATCGTTCATTGCCGTCGGGTCATCTCGTGAGTCCGGGCGGAGTGTGCAGGGATTGACGTTTGCTACAAGCATCTCGACAATTTGGAACAGGAAAGCGTACCACAACGAATCGAATTCGTGTGCGTGACATAAGGAAACTTACCATGCTTTGACCGCCCATTACTCGAAACTTTTTCTTTCGAGTTACCAATCCATCTCCGATCGATTGCGCGTGGCAAAAGTTGCTCTTTTAAGCGACAAAATGCAAATTGTATGCCAAGAAAGGCTTAAAAAGGTGGCCCTCTTACACGTTGAGCGGGAAGCATGTGTTTGGAAGAGTGTGAGGTGGTGTGTGTGTTGCGGACACAAACACAGAATAGGAATTTAAACCTC] consensusID : consensus_9204#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1417 fasta sequence [CCGCCCACGCGTCCGCCGGAGCGACGGGACACCTGCGAGCATTCATCCGAGGCCAAAGCATTTCATGACTACGGTTTCGTGAGTTCAGGGTACGGAGTGAACGGAATAGCACACAATGCCGGCCCGGCACCGAGCCCACTGGGACAGTTACCACCAAACGAAGGCATGCCCGGCGGCCCGATGGCACCTTCAGGCTTCTTTCCGCCGTTCATGGGTGGCCCCCGATATCCACCAGGACCCAGGCCGGGAGTGAGAATGCCGCAAGGAATTGGAAACGATTTCAATGGTCCCCCCGGACAACCAATGATGCCAAATAGTATGGATCCGACGCGTCCGGTGAAGCTGGAGACTTTGTAGCATGGCAAGGTATGGGTCCCATGAATCCTAGAATGAATCCACCTCGCGGCCCGGGCATGGGCCCCATGGGAGGGGGAACGTACGGTCCAGGAATGCGCGGTCCCCCACCAAACAGCAGTTTAGGACCGGGCGGTATGCCACCGATGGGTATGGCCGGCGGTCGGCCAAAGTGGCAACCGAACACGTCATCGCCGATGAAATACTCGTCGTCCTCGCCCGGCAACTACGGCGGACCGCCGGGACCGAGCGGGCCCCCTGGACCGGGTACGCCCATCATGCCATCACCTCAAGATTCATCCAACTCCGGCGGCGAAAACATGTAAACACCAATGAAACCTGAATTCCCTATGGTCGGCGGCACGGACGGCAGCGGCCCGATGGGTGGACCGATGGGCCCGAACACGATGGGCGGCCCGGTACTTAATAACGATGGTTTGGACGGCATGAAGAACAGCCCCGCGAACGGTCCGGGCACGCCACGGGAAGACTCCGGCAGCGGTATGGGCGATTACAACCTCGGCGGCTTCGGTGGTCCCGGCGAGAACGTAAGTTTCGACAATTTCTAGTGACCAGTGTACTGCCAATGTACCTCTTCGCTCACATTGCCCCCACAACCACAACCCTTCATTTTAACAACATTTTG---CAACAACAACAACAACAACAACAAAACAACCAATCGACAACAACCCGCAAGGCTGAATGTGTGGGGTAAAACAGCGACCGACTTTATTATGTATGATTTAGTTTACCCGCGTCTCCCCCCATCCCACTCAAGTGTGTGTTTGTAGTGGGTCTTCGTCCCGCACCTCCCTCAAATGCATATTTTGTGTGTGCTGCACAATGCGAATTATTTTATCACACAAAACATTTCCTAACTGTGTTGTTCCTGTACCGAGCTATTTAAATATTATCTTTCGATCAACGTGAGAAAGGCCGTGTCTTAAAGCTAGAATGTTAAACAAGTTTTCATTTTTAAATTGTTCACCTTTTCGCGTTGAAATCGATCCGTCACTTTGGGGGAGAAGCGAGTGCACGCACACAAATCGATTAAAAACAACAC] [+] EMBL BM632150 [CCGCCCACGCGTCCGCCGGAGCGACGGGACACCTGCGAGCATTCATCCGAGGCCAAAGCATTTCATGACTACGGTTTCGTGAGTTCAGGGTACGGAGTGAACGGAATAGCACACAATGCCGGCCCGGCACCGAGCCCACTGGGACAGTTACCACCAAACGAAGGCATGCCCGGCGGCCCGATGGCACCTTCAGGCTTCTTTCCGCCGTTCATGGGTGGCCCCCGATATCCACCAGGACCCAGGCCGGGAGTGAGAATGCCGCAAGGAATTGGAAACGATTTCAATGGTCCCCCCGGACAACCAATGATGCCAAATAGTATGGATCCGACGCGTCCGGTGAAGCTGGAGACTTTGTAGCATGGCAAGGTATGGGTCCCATGAATCCTAGAATGAATCCACCTCGCGGCCCGGGCATGGGCCCCATG ] [-] EMBL CNS08HAZ [ CCATGAATCCTAGAATGAATCCACCTCGCGGCCCGGGCATGGGCCCCATGGGAGGGGGAACGTACGGTCCAGGAATGCGCGGTCCCCCACCAAACAGCAGTTTAGGACCGGGCGGTATGCCACCGATGGGTATGGCCGGCGGTCGGCCAAAGTGGCAACCGAACACGTCATCGCCGATGAAATACTCGTCGTCCTCGCCCGGCAACTACGGCGGACCGCCGGGACCGAGCGGGCCCCCTGGACCGGGTACGCCCATCATGCCATCACCTCAAGATTCATCCAACTCCGGCGGCGAAAACATGTAAACACCAATGAAACCTGAATTCCCTATGGTCGGCGGCACGGACGGCAGCGGCCCGATGGGTGGACCGATGGGCCCGAACACGATGGGCGGCCCGGTACTTAATAACGATGGTTTGGACGGCATGAAGAACAGCCCCGCGAACGGTCCGGGCACGCCACGGGAAGACTCCGGCAGCGGTATGGGCGATTACAACCTCGGCGGCTTCGGTGGTCCCGGCGAGAACGTAAGTTCCGACAATTTCTAGTGACCAGTGTACTGCCAATGTACCTCTTCGCTCACATTGCCCCCACAACCACAACCCTTCATTTTAACAACATTTTG CAACAACAACAACAACAACAACAAAACAACCAATCGACAACAACCCGCAAGGCTGAATGTGTGGGGTAAAACAGCGACCGACTTTATTATGTATGATTTAGTTTACCCGCGTCTCCCCCCATCCCACTCAAGTGTGTGTTTTTAGTGGGTCTTCGTCCCGCACCTCCCTCAAATGCATATTTTGTGTGTG TGCACAATGCG ] [+] EMBL CNS09EY7 [ CTCGCGG CCGGGCATGGG CCCATGGGAGCGGGCACGTACGGTCCAGGAATGCGCGGTCCCCCACCAAACAGCAGTTTAGGACCGGGCGGTATGCCACCGATGGGTATGGCCGGCGGTCGGCCACAGTGGCAACCGAACACGTCATCGCCGATGAACTACTCGTCGTCCTCGCCCGGCAACTACGGCGGACCGCCGGGACCGAGCGGGCCCCCTGGACCGGGTACGCCCATCATGCCATCACCTCAAGATTCATCCAACTCCGGCGGCGAAAACATGTACACACCAATGAAACCTGAATTCCCTATGGTCGGCGGCACGGACGGCAGCGGCCCGATGGGTGGACCGATGGGCCCGAACACGATGGGCGGCCCGGTACTTAATAACGATGGTTTGGACGGCATGAAGAACAGCCCCGCGAACGGTCCGGGCACGCCACGGGAAGACTCCGGCAGCGGTATGGGCGATTACAACCTCGGCGGCTTCGGTGGTCCCGGCGAGAACGTAAGTTTCGACAATTTCTAGTGACCAGTGTACTGCCAATGTACCTCTTCGCTCACATTGCCCCCACAACCACAACCCTTCATTTTAACAACATTTTG CAACAACAACAACAACAACAACAAAACAACCAATCGACAACAACCCGCAAGGCTGAATGTGTGGGGTAAAACAGCGACCGACTTTATTATGTATGATTTAGTTTACCCGCGTCTCCCCCCATCCCACTCAAGTGTGTGTTTGTAGTGGGTCTTCGTCCCGCACCTCCCTCAAATGCATATTTTGTGTGTGCTGCACAATGCGAATTATTTTATCACACAAAACATTTCCTAACTGTGTTGTTCCTGTACCGAG ] [+] EMBL CNS09HEG [ ACCTCAAGATTCATCCAACTCCGGCGGCGAAAACATGTACACACCAATGAAACCTGAATTCCCTATGGTCGGCGGCACGGACGGCAGCGGCCCGATGGGTGGACCGATGGGCCCGAACACGATGGGCGGCCCGGTACTTAAAAACGATGGTTTGGACGGCATGAAGAACAGCCCCGCGAACGGTCCGGGCACGCCACGGGAAGACTCCGGCAGCGGTATGGGCGATTACAACCTCGGCGGCTTCGGTGGTCCCGGCGAGAACGTAAGTTTCGACAATTTCTAGTGACCAGTGTACTGCCAATGTACCTCTTCGCTCACATTGCCCCCACAACCACAACCCTTCATTTTAACAACAT ] [-] EMBL CNS09HEH [ GTAAACACCAATGAAACCTGAATTCCCTATGGTCGGCGGCACGGACGGCAGCGGCCCGATGGGTGGACCGATGGGCCCGAAAACGATGGGCGGCCCGGTACTTAATAAAGAT ] [-] EMBL CNS09EY8 [ CCGCGAACGGTCCGGGCACGCCACGGGAAAACTCCGGCAGCGGTATGGGCGATTACAACCTCGGCGGCTTCGGTGGTCCCGGCGAGAACGTAAGTTTCGACAATTTCTAGTGACCAGTGAACTGCCAATGTACCTCTTTGCTCACATTGCCCCCACAACCACAACCCTTCATTTTTACAACATTTTG CAACAACAACAACAACAACAAAAAAACAACCAATCGACAACAACCCGCAAGGCTGAATTTGTGGGGTAAAACAGCGACCGACTTTTTTATGTATGATTTAGTTTACCCGCGTCTCCCCCCATCCCACTCAAGTGTGTGTTTGTAGTGGGTCT ] [+] EMBL BM614649 [ cCGGTCCGGGCACGCCACGGGAAGACTCCGGCAGCGGTATGGGCGATTACAACCTCGGCGGCTTCGGTGGTCCCGGCGAGAACGTAAGTTTCGACAATTTCTAGTGACCAGTGTACTGCCAATGTACCTCTTCGCTCACATTGCCCCCACAACCACAACCCTTCATTTTAACAACATTTTGCAACAACAACAACAACAACAACAACAAAACAACCAATCGACAACAACCCGCAAGGCTGAATGTGTGGGGTAAAACAGCGACCGACTTT TTATGTATGATTTAGTTTACCCGCGTCTCCCCCCATCCCACTCAAGT TGTGTTTGTAGTGGGTCTTCGTCCCGCACCTCCCTCAAATGCATATTTTGTGTGCGCTGCACAATGCGAATTATTTTATCACACAAAACATTTCCTAACTGTGTTGTTCCTGTACCGAGCTATTTAAATATTATCTTTCGATCAACGTGAGAAAGGCCGTGTCTTAAAGCTAGAATGTTAAACAAGTTTTCATTTTTAAATTGTTCACCTTTTCGCGTTGAAATCGATCCGTCACTTTGGGGGAGAAGCGAGTGCACGCACACAAATCGATTAAAAACAACAC] consensusID : consensus_9204#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 523 fasta sequence [CCGCCGAACTCCTCCATTAGGCCATCACAACCTTCACACCCTAGTAGTCAGCAGTCCCCACATCCACAGCCTCCAAACTCGCATGGACAATTGATGAGCGGTCAGCCGTTCATGGGTGGCCCCCGATATCCACCAGGACCCAGGCCGGGAGTGAGAATGCCGCAAGGAATTGGAAACGATTTCAATGGTCCCCCCGGACAACCAATGATGCCAAATAGTATGGATCCGACGCGGCAAGGTGAAGCTGGAGACTTTGTAGCATGGCAAGGCCCTCCAGGTATGGGTCCCATGAATCCTAGAATGAATCCACCTCGCGGCCCGGGCATGGGCCCCATGGGAGCGGGCACGTACGGTCCAGGAATGCGCGGTCCCCCACCAAACAGCAGTTTAGGACCGGGCGGTATGCCACCGATGGGTATGGGCCGGCGGTCGGCCACAGTGGCAACCGAACACGTCATCGCCGATGAACTACTCGTCGTCCTCGCCCGGCAACTACGGCGGACCGCCGGGGACCAAGCGGGGC] [+] EMBL BM583680 [CCGCCGAACTCCTCCATTAGGCCATCACAACCTTCACACCCTAGTAGTCAGCAGTCCCCACATCCACAGCCTCCAAACTCGCATGGACAATTGATGAGCGGTCAGCCGTTCATGGGTGGCCCCCGATATCCACCAGGACCCAGGCCGGGAGTGAGAATGCCGCAAGGAATTGGAAACGATTTCAATGGTCCCCCCGGACAACCAATGATGCCAAATAGTATGGATCCGACGCGGCAAGGTGAAGCTGGAGACTTTGTAGCATGGCAAGGCCCTCCAGGTATGGGTCCCATGAATCCTAGAATGAATCCACCTCGCGGCCCGGGCATGGGCCCCATGGGAGCGGGCACGTACGGTCCAGGAATGCGCGGTCCCCCACCAAACAGCAGTTTAGGACCGGGCGGTATGCCACCGATGGGTATGGGCCGGCGGTCGGCCACAGTGGCAACCGAACACGTCATCGCCGATGAACTACTCGTCGTCCTCGCCCGGCAACTACGGCGGACCGCCGGGGACCAAGCGGGGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9204#2 ----------------------------------------------------------CC 2 consensus_9204#3 ------------------------------------------------------------ consensus_9204#0 GAGGCCAAAGCATTTCATGACTACGGTTTCGTGAGTTCAGGGTACGGAGTGAACGGAATA 60 consensus_9204#1 ------------------------------------------------------------ consensus_9204#2 GCCCACGCGTCCGCCGGAGCGACGGGACACCTGCGAGCATTCATCCGAGGCCAAAGCATT 62 consensus_9204#3 ------------------------------------------------------------ consensus_9204#0 GCACACAATGCCGGCCCGGCACCGAGCCCACTGGGACAGTTACCACCAAACGAAGGCATG 120 consensus_9204#1 -----TTCTGGACTCTCCATGCAGATGAAGCAAGATCAACAGCAGATGATTCCGGAAAAG 55 consensus_9204#2 TCATGACTACGGTTTCGTGAGTTCAGGGTACGGAGTGAACGGAATAGCACACAATGCCGG 122 consensus_9204#3 -----------------------------------CCGCCGAACTCCTCCATTAGGCCAT 25 consensus_9204#0 CC-CGGCGGCCCGATGGCTCCTTCAGGCTTC----TTTCCGAACTCCTCCATTAGGCCAT 175 consensus_9204#1 AAAAAGTGGATTCACGACCCTTCAAGTGATC----TCTGCAAACCGCTCAACTGCAAGAA 111 * * * consensus_9204#2 CCCGGCACCGAGCCCACTGGGACA---GTTACCACCA-AACGAAGGCAT-GCCCGGCGGC 177 consensus_9204#3 CACAACCTTCA---CACCCTAGTA---GTCAGCAGTC-CCCACATCCACAGCCTCCAAAC 78 consensus_9204#0 CACAACCTTCA---CACCCTAGTA---GTCAGCAGTC-CCCACATCCACAGCCTCCAAAC 228 consensus_9204#1 GAAAGAGCTCTGCCTGCTGGAGGACGCGTACACGGCTGTCTGCGTTTCGAAGAAGGAACT 171 * * ** * consensus_9204#2 CCGATGGCACCT-TCAGGCTTCTTTCCGCCGTTCATGGGTGGCCCCCGATATCCACCAGG 236 consensus_9204#3 TCGCATGGACAA-TTGATGAGCGGTCAGCCGTTCATGGGTGGCCCCCGATATCCACCAGG 137 consensus_9204#0 TCGCATGGACAA-TTGATGAGCGGTCAGCCGTTCATGGGTGGCCCCCGATATCCACCAGG 287 consensus_9204#1 CCACAAGAACAAATTCATCAGCAG-CAGCCTTGCCATCATGATCATT-ATGATCGTCGTC 229 * * ** * * * *** * * ** * ** * * consensus_9204#2 ACCCAGGCCGGGAGTGAGAATGCCGCAAGGAATTGGAA--ACGATTTCAATGGTCCCCCC 294 consensus_9204#3 ACCCAGGCCGGGAGTGAGAATGCCGCAAGGAATTGGAA--ACGATTTCAATGGTCCCCCC 195 consensus_9204#0 ACCCAGGCCGGGAGTGAGAATGCCGCAAGGAATTGGAA--ACGATTTCAATGGTCCCCCC 345 consensus_9204#1 GCT---ACCACGATCGCCACTACCACTGGGCACTACTACTACTACTACTACTATCACCAG 286 * ** ** * * * ** * ** * * * ** * * * * ** ** consensus_9204#2 GGACAAC--CAATGATGCCA--AATAGTATGGATCC-GACGCGTCC-GGTGAAGCTGGAG 348 consensus_9204#3 GGACAAC--CAATGATGCCA--AATAGTATGGATCC-GACGCGGCAAGGTGAAGCTGGAG 250 consensus_9204#0 GGACAAC--CAATGATGCCA--AATAGTATGGATCC-GACGCG----------------- 383 consensus_9204#1 CAGCAGCAGCAGCAGCATCATCAACAACAACAACACAGACGCACGATGATCATCAGTGGC 346 ** * ** ** ** * * * * ***** consensus_9204#2 ACTTTGTAGCATGGCAAG---------GTATGGGTCCCATGAATCCTAGAATGAATCCAC 399 consensus_9204#3 ACTTTGTAGCATGGCAAGGCCCTCCAGGTATGGGTCCCATGAATCCTAGAATGAATCCAC 310 consensus_9204#0 -------------GCAAG---------GTATGGGTCCCATGAATCCTAGAATGAATCCAC 421 consensus_9204#1 AAACCAATGTGT-GCAATGGC----AAACCATGCTTCTGTAACAGCTGGTACCC-TCCCC 400 **** * * * * * ** * * *** * consensus_9204#2 CTCGCGGCCCGGGCATGGGCCCCATGGGAGGGGGAACGTACGGTCCAGGAATGCGCGGTC 459 consensus_9204#3 CTCGCGGCCCGGGCATGGGCCCCATGGGAGCGGGCACGTACGGTCCAGGAATGCGCGGTC 370 consensus_9204#0 CTCGCGGCCCGGGCATGGGCCCCATGGGAGCGGGCACGTACGGTCCAGGAATGCGCGGTC 481 consensus_9204#1 CAAGTGGATTTTATTAATCACTCACCACCACCAGCA-GCACAA--CGACACCGATCGGTT 457 * * ** * ** * * * ** * * * **** consensus_9204#2 CCCCACCAAACAGCAGTTTAGGACCGGGCGGTATGCCACCGATGGGTATGG-CCGGCGGT 518 consensus_9204#3 CCCCACCAAACAGCAGTTTAGGACCGGGCGGTATGCCACCGATGGGTATGGGCCGGCGGT 430 consensus_9204#0 CCCCACCAAACAGCAGTTTAGGACCGGGCGGTATGCCACCGATGGGTATGG-CCGGCGGT 540 consensus_9204#1 CACGAGTCA-CGTCACTGTAGGTGAATACGTAAATTTGTTGATGCAAAACGAGTACCAAA 516 * * * * * ** * **** ** * **** * * * consensus_9204#2 CGGC--CAAAGTGGCAACCGAACACGT-CATCGCCGATGAA-ATACTCGTCGTCCTCGCC 574 consensus_9204#3 CGGC--CACAGTGGCAACCGAACACGT-CATCGCCGATGAA-CTACTCGTCGTCCTCGCC 486 consensus_9204#0 CGGC--CACAGTGGCAACCGAACACGT-CATCGCCGATGAA-CTACTCGTCGTCCTCGCC 596 consensus_9204#1 CGGTATCATCACGCTGTCTGTGTCTGTACCCCGTTGATGCGTCTGTATCTCACCACCATT 576 *** ** * * * ** * ** **** * ** * * consensus_9204#2 CGGCAACTACGGCGGACCGCCGGG-ACCGAGCGGGCCCCCTGGACCGGGTACGCCCATCA 633 consensus_9204#3 CGGCAACTACGGCGGACCGCCGGGGACCAAGCGGGGC----------------------- 523 consensus_9204#0 CGGCAACTACGGCGGACCGCCGGG-ACCGAGCGGGCCCCCTGGACCGGGTACGCCCATCA 655 consensus_9204#1 GGAAGGATTAGGCGAAGAAGAAGA---AGAAAAAAACCTGCAAATAAGACTTGCTCTGCA 633 * * **** * * * * consensus_9204#2 TGCCATCACCTCAAGATTCATCCAACTCCGGCGGCGAAAACATGTAA--ACACCAATGAA 691 consensus_9204#3 ------------------------------------------------------------ consensus_9204#0 TGCCATCACCTCAAGATTCATCCAACTCCGGCGGCGAAAACATGTAC--ACACCAATGAA 713 consensus_9204#1 GAGTGTGTGCGTGCGTTTGGGGCGATTGGGATGGCGAAGATTGATAATAATATGGCTGGG 693 consensus_9204#2 ACCTGAATTCCCTATGGTCGGCGGCACGGACGGCAGCGGCCCGATGGGTGGACCGATGGG 751 consensus_9204#3 ------------------------------------------------------------ consensus_9204#0 ACCTGAATTCCCTATGGTCGGCGGCACGGACGGCAGCGGCCCGATGGGTGGACCGATGGG 773 consensus_9204#1 TTCTGGGTTCTCTATGGGTGTGACTGGGTTGTGTGGCTGCTAGACATAGACACACATACA 753 consensus_9204#2 CCCGAACACGATGGGCGGCCCGGTACTTAATAACGATGGTTTGGACGGCATGAAGAACAG 811 consensus_9204#3 ------------------------------------------------------------ consensus_9204#0 CCCGAACACGATGGGCGGCCCGGTACTTAATAACGATGGTTTGGACGGCATGAAGAACAG 833 consensus_9204#1 CACATTTTTACCAAAAAGAAGCAAAACTATAAAAAATATTACACAAAAAAAGAGAAAGAG 813 consensus_9204#2 CCCCGCGAACGGTCCGGGCACGCCACGGGAAGACTCCGGCAGCGGTATGGGCGATTACAA 871 consensus_9204#3 ------------------------------------------------------------ consensus_9204#0 CCCCGCGAACGGTCCGGGCACGCCACGGGAAGACTCCGGCAGCGGTATGGGCGATTACAA 893 consensus_9204#1 ACA-AAACAGAGCGAAAGCAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACGAG-GGAA 871 consensus_9204#2 CCTCGGCGGCTTCGGTGGTCCCGGCGAGAACG--TAAGTT---TCGACAATTTC------ 920 consensus_9204#3 ------------------------------------------------------------ consensus_9204#0 CCTCGGCGGCTTCGGTGGTCCCGGCGAGAACGATCAAACCGAATCGGCCGCTATACTGAA 953 consensus_9204#1 AAACGTCAAACTGGTTGAGCATAATGATAGCAG--AAACAGAAAGGAAAAGAAAG----- 924 consensus_9204#2 --TAGTGACCAGTGTACTGCCA-ATGTACCTCTTCGCTCACATTGCCCCCACAACCACAA 977 consensus_9204#3 ------------------------------------------------------------ consensus_9204#0 AATAAAGGAAAGCATGCAGGAGGAGGCAAAGCGTTTCGAGAAAGACTCGGACCAGCCCGA 1013 consensus_9204#1 ---GCAGAGAGAAAGATAGTTGAAAGTTGAATATATAAAACGCGATGTATTCTAATGATA 981 consensus_9204#2 CCCTTC-ATTTTAACAACATTTTGCAACAACAACAACAACAACAACAA--AACAACCAAT 1034 consensus_9204#3 ------------------------------------------------------------ consensus_9204#0 CTACTA-TATGCAATAACATCCTCCTTCTCCTACCGCTACTACAGCCGCTACTAGTACTT 1072 consensus_9204#1 AAACCGGTAAAAAAAGAAACCAATTCACTCTTAAGTTTTCTTAGATTGTTACACAAAGAC 1041 consensus_9204#2 CGACAACAACCCGCAAGGCTGAATGTGTGGGGTAAAACAGCGACCGACTTTATTATGTAT 1094 consensus_9204#3 ------------------------------------------------------------ consensus_9204#0 CTTCTATTACTTCTGTTATCGAATCTAGTAGTACTGATATCGTAAAGGCAATCTATACTA 1132 consensus_9204#1 AGAGAAGGGAGAAAAAGCACGAAGCTGATAG-AGAGAAAGAGAGAGAGAGAGGGACACTC 1100 consensus_9204#2 GATTTAGTTTACCCGCGTCTCCCCCCATCCCACTCAAGTGTGTGTTTGTAGTGGGTCTTC 1154 consensus_9204#3 ------------------------------------------------------------ consensus_9204#0 GTACTACTTTTACCATTACCAGCACTATCACTATCGACAGCATTGGCAGCCTTGCCATCA 1192 consensus_9204#1 CTATACCCCCAATCAAGA--AGGAAGAGAGAGAGAGAAAAGAGGACCCATAAAAAGATCA 1158 consensus_9204#2 GTCCCGCACCTCCCTCAAATGCATATTTTGTGTGTGCTGCACAATGCGAATTATTTTA-T 1213 consensus_9204#3 ------------------------------------------------------------ consensus_9204#0 TGATCATTATGATCGTCGTCGC-TACCACGATCGCCACTACCACTGGGCACTACTACT-A 1250 consensus_9204#1 AGTAATCGTTCATTGCCGTCGGGTCATCTCGTGAGTCCGGGCGGAGTGTGCAGGGATTGA 1218 consensus_9204#2 CACACAAAACATTTCCTAACTGTGTTGTTCCTGTACCGAGCTATTTAAATATTATCTTTC 1273 consensus_9204#3 ------------------------------------------------------------ consensus_9204#0 CTACTACTACTATCACCAGCAGCAGCAGCAGCAGCATCATCAACAACAACAACACAGACG 1310 consensus_9204#1 CGTTTGCTACAAGCATCTCGACAATTTGGAACAGGAAAGCGTACCACAACGAATCGAATT 1278 consensus_9204#2 GATCAACGTGAGAAAGGCCGTGTCTTAAAGCTAGAATGTTAAACAAGTT------TTCAT 1327 consensus_9204#3 ------------------------------------------------------------ consensus_9204#0 CACGATGATCATCAGTGGCAAACCA-ATGTGTGCAATGGCAAACCATGC------TTC-T 1362 consensus_9204#1 CGTGTGCGTGACAGAAGGAAACTTACCATGCTTTGACCGCCCATTACTCGAAACTTTTTC 1338 consensus_9204#2 TTTTAAATTGTTCACCTTTTCGCGTTGAAATCGATCCGTCACTTTGGGGGAGAAGCGAGT 1387 consensus_9204#3 ------------------------------------------------------------ consensus_9204#0 GTAACAGCTGGTACCCTCCCCCAAGTGGATTTTATTAATCACTCACCACCACCAGC-AGC 1421 consensus_9204#1 TTTCGAGTTACCAATCCATCTCCGATCGATTGCGCGTGGCAAAAGTTGCT-CTTTTAAGC 1397 consensus_9204#2 GCACGCACACAAATCGATTAA-AAACAACAC----------------------------- 1417 consensus_9204#3 ------------------------------------------------------------ consensus_9204#0 ACAACGACACCGATCGGTTCACGAGTCACGTCACTGTAGGTGAATACGTAAATTTGTTGA 1481 consensus_9204#1 GACAAAATGCAAATTGTATGCCAAGAAAGGCTTAAAAAGGTGGCCCTCTTACACGTTGAG 1457 consensus_9204#2 ------------------------------------------------------------ consensus_9204#3 ------------------------------------------------------------ consensus_9204#0 TGCAAAACGAGTACCAAACGGTAT-CATCACGCTGTCTGTGTC-TGTACCCCGTTGATGC 1539 consensus_9204#1 CGGGAAGCATGTGTTTGGAAGAGTGTGAGGTGGTGTGTGTGTTGCGGACACAAACACAGA 1517 consensus_9204#2 ------------------------------------------------------------ consensus_9204#3 ------------------------------------------------------------ consensus_9204#0 GTCTGTATCTCACCACCATTGGAAGGATTATGCGAAGAAGAAGAAGAAAAAAACCTGCAA 1599 consensus_9204#1 ATAGGAATTTAAACCTC------------------------------------------- 1534 consensus_9204#2 ---------------- consensus_9204#3 ---------------- consensus_9204#0 ATAAGACTTGCTCTGC 1615 consensus_9204#1 ---------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||