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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9208#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1036 fasta sequence
[CGACCCACGCGTCCGATCAGAAAAAAATTCTTCAGCTTAACTTTCACTCGTTTTAAACATAGTTATTCGACTGTATTCAAACGTCATACCAGTTGCAACTGACCTTCACCTTTGTACTTTGCTGAAATCGCCATCCTATAACGCACTTGGCATACATTATGGCAGCAGAACAAACCCGCGACACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAA-GGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTGGTTGTGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCATCATTTTGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAA-CTGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGC-GAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGT-CC-GTTGTGACC-GGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAG-ATTGAATGCCGTGTCTGTATAAACGATTCGAAAAAGCACATAGATGTTGGTGAAGCATTGC-TTAGCCTAGGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGTCCGAAATCGAAAAGATGTGCACGCTGTCGCACTATATCAATATTATCGAACGTTGGCCAAGGCTGAACAGTACGCCAAGGATCGTCGCAATGGTTTGTGGCAAAGTTCGTTGGGTCCCCGGGTTTGGCCACTATCCTTGTGGCCTGTATTGTGGGATCGTGTGACCAACCCCAACCGCGTGCCGGCGCTTGTTCGATGATACACTGTTCCAATCTATGGTTCACTAAAGTGAGTGAGAAATAATAGAAAACTTGCAGTATGTGTAATGCATATTTTCTGTTGGTGCCTTAAGCTTGTATATCTATGACAGAAAAAGCAATCAATAAAATGTTACAAATC]
[+] EMBL BM640731 [CGACCCACGCGTCCGATCAGAAAAAAATTCTTCAGCTTAACTTTCACTCGTTTTAAACATAGTTATTCGACTGTATTCAAACGTCGTACCAGTTGCAACTGACCTTCACCTTTGCACTTTGCTGAAATCGCCATCCTATAACGCACTTGGCATACATTATGGCAGCAGAACAAACCCGCGACACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAA GGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTGGTTGTGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCATCATTTTGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAA CTGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGC AAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGT CC GTTGTAACC GGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAG ATTGAATGCCGTGTCTGTATAAACGATTCGAAAAAGCAGATAGATGTTGGTGAAGCATTGC TTAGCCTAGGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGTCCGAAATCGAAAAGATGTACACGC ]
[+] EMBL BM605932 [ ccgctCGATCAGAAAAAAATTCTTCAGCTTAACTTTCACTCGTTTTAAACATAGTTATTCGACTGTATTCAAACGTCATACCAGTTG GGCTGACCTTCACCTTTGTACTTTGCTGAAATCGCCATCCTATAACGCACTTGGCATACATTATGGCAGCAGAACAAACCCGCGACACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACCAAA GGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTGGTTGTGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCATCATTTTGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAA CTGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGC GAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGT CC GTTGTGACC GGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAA ATTGAATGCCGTGTCTGTATAAACGATTCCAAAAAGC ]
[+] EMBL BM608793 [ GATCAGAAAAAAATTCTTCAGCTTAACTTTCACTCGTTTTAAACATAGTTATTCGACTGTATTCAAACGTCATACCAGTTGCAACTGACCTTCACCTTTGTACTTTGCTGAAATCGCCATCCTATAACGCACTTGGCATACATTATGGCAGCAGAACAAACCCGCGACACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAA GGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTGGTTGTGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCATCATTTTGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAA CTGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGC GAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGT CC GTTGTGACC GGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAG ATTGAATGCCGTGTCTGTATAAACGATTCGAAAAAGCACATAGATGTTGGTGAAGCATTGCTTTAGCCTAGGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGTCCGAAATCGAAAAGATGTGCACGC ]
[+] EMBL CNS08CSK [ ATTCTTCAGCTTAACTTTCACTCGTTTTAAACATAGTTATTCGACTGTATTCAAACGTCATACCAGTTGCAACTGACCTTCACCTTTGTACTTTGCTGAAATCGCCATCCTATAACGCACTTGGCATACATTATGGCAGCAGAACAAACCCGCGACACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAA GGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTGGTTGTGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCATCATTTTGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAA CTGTACGGTCCTCTGCTAGAAGTGCAACATCATCCACCGGC GAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGT CC GTTGTGACC GGCAAAGAGATATGCTTCATCCCGATGAAGGAACCATCCAGCGCA CTCAG ATTGAATGCCGTGTCTGTATAAACGATTCGAAAAAGCACATAGATGTTGGTGAAGCATTGC TTAGCCTAGGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGTCCGAAATCGAAAAGATGTGCACGCTGTCGCACTATATCAATATTATCGAACGTTGGCCAAGGCTGAACAGTACGCCAAGGATCGTCGCAATGGTTTGTGGCAAAGTTCGTTGGGT CCCGGGTTTGGCCACTATCCTTGTGGCCTGTATTGTGGGATCGTGTGACCAACCCCAACCGCGTGCCGGCGCTTGTTCGATGATACACTGTTCCAATCTATGGTTCACTAAAGTGAGTTAGAAATAATAGAAAACTTGCAGTATGTGTAATGCATATTTTCTGTTGGTGCCTTAA ]
[+] EMBL CNS08Z5Q [ ATTCTTCAGCTTAACTTTCACTCGTATTAAACATAGTTATTCGACTGTATTCAAACGTCATACCAGTTGCAACTGACCTTCACCTTTGTACTTTGCTGAAATCGCCATCCTATAACGCACTTGGCATACATTATGGCAGCAGAACAAACCCGCGACACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAA GGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTGGTTGTGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCGTCATTTAGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAA CCGTACGGTCCTCTGCTAGTTGTGC ACATCATCCACCGGC GAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGT CC GTTGTGACC GGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAG TCAGAATTGAATGCCGTGTCTGTATAAACGATTCGAAAAAGCAAATAGATGTTGGTGAAGCATTGC TTAGCCTAGGGT ]
[+] EMBL CNS09L6A [ ATTCTTCAGCTTAACTTTCACTCGTATTAAACATAGTTATTCGACTGTATTCAAACGTCATACCAGTTGCAACTGACCTTCACCTTTGTACTTTGCTGAAATCGCCATCCTATAACGCACTTGGCATACATTATGGCAGCAGAACAAACCCGCGACACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAA GGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTGGTTGTGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCGTCATTTAGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAA CTGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGC GAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGT CC GTTGTGACC GGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCA CTCAG ATTGAATGCCGTGTCTGTATAAACGATTCGAAAAAGCAAATAGATGTTGGTGAAGCATTGC TTAGCCTAGGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGTCCGAAATCGAAAAGATGTGCACGCTGTCGCACTATATCAATATTATCGAACGTTGGCCAAGGCTGAACAGTACGCCAAGGATCGTCGCAATGGTTTGTGGCAAAGTTCGTTGGGT CCCGGGTTTGGCCACTATCCTTGTGGCCTGTATTGTGGGATCGTGTGACCAACCCCAAAAAAGTGCCGGCGCTTGTTCGATGATGCACTGTTCCAATCTATGGTTCACTACAGTGAGTGAGAAATAA ]
[+] EMBL CNS08G36 [ ACGTCATACCAGTTGCAACTGACCTTCACCTTTGTACTTTGCTGAAATCGCCATCCTATAACGCACTTGGCATACATTATGGCAGCAGAACAAACCCGCGACACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAAGGGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTGGTTGTGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCATCATTTTGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAA CTGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGCGGAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGT CCGGTTGTGACCGGGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCA CTCAGca ]
[-] EMBL CNS08CSL [ ACTTTGCTGAAATCGCCATCCTATAACGCACTTGGCATACATTATGGCAGCAGAACAAACCCGCGAAACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAA GGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTGGTTGTGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCATCATTTTGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTAACAA CTGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGC GAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGT CC GTTGTGACC GGCAAAGAGATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAG ATTGAATGCCGTGTCTGTATAATCGATTCGAAAAAGCACATAGATGTTGGTGAAGCATTGC TTAGCCTAGGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGTCCGAAATCGAAAAGATGTGCACGCTGTCGCACTATATCAATATTATCGAACGTTGGCCAAGGCTGAACAGTACGCCAAGGATCGTCGCAATGGTTTGTGGCAAAGTTCGTTGGGTCCCCGGGTTTGGCCACTATCCTTGTGGCCTGTATTGTGGGATCGTGTGACCAACCCCAACCGCGTGCCGGCGCTTGTTCGATGATACACTGTTCCAATCTATGGTTCACTAAAGTGAGTGAGAAATAATAGAAAACTTGCAGTATGTGTAATGCATATTTTCTGTTGGTGCCTTAAGCTTGTATATCTATGACAGAAAAAGCAATCAATAAAATGTTAC ]
[+] EMBL BM601381 [ ccgGAACAAACCCGCGACACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAA GGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTGGTTGTGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCATCATTTTGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAA CTGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGC GAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGT CC GTTGTGACC GGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAG ATTGAATGCCGTGTCTGTATAAACGATTCGAAAAAGCACATAGATGTTGGTGAAGCATTGC TTAGCCTAGGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGTCCGAAATCGAAAAGATGTGCACGCTGTCGCACT ]
[+] EMBL BM593783 [ ccgAAACCCGCGACACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAA GGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTGGTTGTGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCATCATTTTGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAA CTGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGC GAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGT CC GTTGTGACC GGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAG ATTGAATGCCGTGTCTGTATAAACGATTCGAAAAAGCACATAGATGTTGGTGAAGCATTGC TTAGCCTAGGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGTCCGAAATCGAAAAGATGTGCACGCTGTCGCACTATATCAATATTATCGAACGTTGGCCAAGGCTGAACAGTACGCCAAGGATCGTCGCAATGGTTTGTGGCAAAGTTCGTTGGGTCCCCGGG ]
[-] EMBL CNS09L6B [ GCGAAACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAA GGCGTTGAGATAGTCAGCTACACAGTTTCTGGAATTTTACTGGTTGTGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCGTCATTTAGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAA CTGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGC GAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGT CC GTTGTGACC GGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAG ATTAAATGCCGTGTCTGTATAAACGATTCGAAAAAGCAAATAGATGTTGGTGAAGCATTGC TTAGCCTAGGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGTCCGAAATCGAAAAGATGTGCACGCTGTCGCACTATATCAATATTATCGAACGTTGGCCAAGGCTGAACAGTACGCCAAGGATCGTCGCAATGGTTTGTGGCAAAGTTCGTTGGGTCCCCGGGTTTGGCCACTATCCTTGTGGCCTGTATTGTGGGATCGTGTGACCAACCCCAACCGCGTGCCGGCGCTTGTTCGATGATGCACTGTTCCAATCTATGGTTCACTACAGTGAGTGAGAAATAATAGAAAACTTGCAGTATGTGTAATGCATATTTTCTGTTGGTGCCTTAAGCTTGTATATCTATGACAGAAAAAGCAATCAATAAAATGTT ]
[-] EMBL CNS08Z5R [ AGTAAAACAGTAT GTA GGTAACTAAAATAGAACCGTCACAACCGGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGC GAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGTCCC GTTGTGACC GGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAG ATTGAATGCCGTGTCTGTATAAACGATTCGAAAAAGCAAATAGATGTTGGTGAAGCATTGC TTAGCCTAGGGTTCGCCAAGCTCT CGTCCCGGTGCCAAAATCGGTCCGAAATCGAAAAGATGTGCACGCTGTCGCACTATATCAATATTATCGAACGTTGGCCAAGGCTGAACAGTACGCCAAGGATCGTCGCAATGGTTTGTGGCAAAGTTCGTTGGGTCCCCGGGTTTGGCCACTATCCTTGTGGCCTGTATTGTGGGATCGTGTGACCAACCCCAACCGCGTGCCGGCGCTTGTTCGATGATGCACTGTTCCAATCTATGGTTCACTACAGTGAGTGAGAAATAATAGAAAACTTGCAGTATGTGTAATGCATATTTTCTGTTGGTGCCTTAAGCTTGTATATCTATGACAGAAAAAGCAATCAATAAA ]
[-] EMBL CNS08G37 [ TACCTATCCAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGT CC GTTGTGACC GGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCGGCTCAG ATTAAATGCCGTGTCTGTATAAACGATTCGAAAAAGAAAATAGATGTTGGTGAAGCATTGC TTAGCCTAGGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGTCCGAAATCGAAAAGATGTGCACG TTTCGCACTATATCAATATTATCGAACGTTGGCCAAGGCTGAACAGTACGCCAAGGATCGTCGCAATGGTTTGTGGCAAAGTTCGTTGGGTCCCCGGGTTTGGCCACTATCCTTGTGGCCTGTATTGTGGGATCGTGTGACCAACCCCAACCGCGTGCCGGCGCTTGTTCGATGATACACTGTTCCAATCTATGGTTCACTAAAGTGAGTGAGAAATAATAGAAAACTTGCAGTATGTGTAATGCATATTTTCTGTTGGTGCCTTAAGCTTGTATATCTATGACAGAAAAAGCAATCAATAAAATGTTACAAATC]
consensusID : consensus_9208#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 894 fasta sequence
[CGAGGCAGAATCGCGCACGAGGAAGGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTTGGTTGTGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCGTCATTTTGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAACTGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGCGAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGTCCGTTGTGACCGGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAGATTGAATGCCGTGTCTGTATAAACGATTCGAAAAAGCAAATAGATGTTGGTGAAGCATTGCTTAGCCTAGGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGACCGAAATCGAAAAGATGTGCACGCTGTCGCACTATATCAATATTATCGAACGTTGGCCAAGGCTGAACAGTACGCCAAGGATCGTCGCAATGGGTTTGGTGGCAAAGNTTCGTTGGGTCCCCCGGGTTTGGGCCACTATCCTTGTGGCCTGTAATTGTGGGATCGTGTGACCAAGCCGAACCGGGGTGCCGGGGCGCCTTTGGTTCGAATGGATTGCACTTGGTTCCCAATTCTTATTGGGGTCCACGTACGCAGGTGGANGTTGAGGAAACAGTTGAGTTCAGGAANANACTCTTGGGCCNAGGAAAAGGTTNGTCAAATTGCCATNATNNGTGCCAGGTAGGGGNTGGCCCTTGAAAGGCCTTGGTGAAGAATCCNTAGTTGGCACCNGGAAAGAAAAAGGCATTG]
[+] EMBL BX467649 [CGAGGCAGAATCGCGCACGAGGAAGGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTTGGTTGTGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCGTCATTTTGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAACTGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGCGAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGTCCGTTGTGACCGGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAGATTGAATGCCGTGTCTGTATAAACGATTCGAAAAAGCAAATAGATGTTGGTGAAGCATTGCTTAGCCTAGGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGACCGAAATCGAAAAGATGTGCACGCTGTCGCACTATATCAATATTATCGAACGTTGGCCAAGGCTGAACAGTACGCCAAGGATCGTCGCAATGGGTTTGGTGGCAAAGNTTCGTTGGGTCCCCCGGGTTTGGGCCACTATCCTTGTGGCCTGTAATTGTGGGATCGTGTGACCAAGCCGAACCGGGGTGCCGGGGCGCCTTTGGTTCGAATGGATTGCACTTGGTTCCCAATTCTTATTGGGGTCCACGTACGCAGGTGGANGTTGAGGAAACAGTTGAGTTCAGGAANANACTCTTGGGCCNAGGAAAAGGTTNGTCAAATTGCCATNATNNGTGCCAGGTAGGGGNTGGCCCTTGAAAGGCCTTGGTGAAGAATCCNTAGTTGGCACCNGGAAAGAAAAAGGCATTG]
consensusID : consensus_9208#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 673 fasta sequence
[CCGCCCACGCGTCCGCGCGACACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAAGGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTGGTTATGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCATCATTTTGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAACTGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGCGAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATAGCTATCAACGCCAATGGGTATTCCTGGTTGCAGTCCGTTGTGACCGGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAGATTGAATGCCGTGTCTGTATAAACGATTCGAAAAAGCAGATAGATGTTGGTGAAGCATTGCTTAGCCTAGGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGTACAAAATCGAAAAGATGTGCACGCTGTCGCACTATATCAATATTATCGAACGTTGGCCAAAGCTGAACGGTACGCCAAGGATCGTCGCAATGGTTTGTGGCAAAGTTCGTTGGGCCCCCGGGTTTGGCCACTATCCT]
[+] EMBL BM599794 [CCGCCCACGCGTCCGCGCGACACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAAGGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTGGTTATGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCATCATTTTGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAACTGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGCGAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATAGCTATCAACGCCAATGGGTATTCCTGGTTGCAGTCCGTTGTGACCGGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAGATTGAATGCCGTGTCTGTATAAACGATTCGAAAAAGCAGATAGATGTTGGTGAAGCATTGCTTAGCCTAGGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGTACAAAATCGAAAAGATGTGCACGCTGTCGCACTATATCAATATTATCGAACGTTGGCCAAAGCTGAACGGTACGCCAAGGATCGTCGCAATGGTTTGTGGCAAAGTTCGTTGGGCCCCCGGGTTTGGCCACTATCCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9208#0 CGACCCACGCGTCCGATCAGAAAAAAATTCTTCAGCTTAACTTTCACTCGTTTTAAACAT 60
consensus_9208#2 ------------------------------------------------------------
consensus_9208#1 ------------------------------------------------------------
consensus_9208#0 AGTTATTCGACTGTATTCAAACGTCATACCAGTTGCAACTGACCTTCACCTTTGTACTTT 120
consensus_9208#2 ------------------------------------------------------------
consensus_9208#1 ------------------------------------------------------------
consensus_9208#0 GCTGAAATCGCCATCCTATAACGCACTTGGCATACATTATGGCAGCAGAACAAACCCGCG 180
consensus_9208#2 -----------------------------------------CCGCCCACGCGTCCGCGCG 19
consensus_9208#1 ------------------------------------------------------------
consensus_9208#0 ACACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAAGGCG 240
consensus_9208#2 ACACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAAGGCG 79
consensus_9208#1 ------------------------------CGAGGCAGAATCGCGC--ACGAGGAAGGCG 28
* * * ** * * ******
consensus_9208#0 TTGAGATAGTCAGCTACACAGTATCTGGAATTTTACT-GGTTGTGGCCTACAGAAAAATA 299
consensus_9208#2 TTGAGATAGTCAGCTACACAGTATCTGGAATTTTACT-GGTTATGGCCTACAGAAAAATA 138
consensus_9208#1 TTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTTGGTTGTGGCCTACAGAAAAATA 88
************************************* **** *****************
consensus_9208#0 CGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCATCATTTTGTCCGTGATCAA 359
consensus_9208#2 CGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCATCATTTTGTCCGTGATCAA 198
consensus_9208#1 CGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCGTCATTTTGTCCGTGATCAA 148
**************************************** *******************
consensus_9208#0 GTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAACTGTACGGTCCTCTGCTA 419
consensus_9208#2 GTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAACTGTACGGTCCTCTGCTA 258
consensus_9208#1 GTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAACTGTACGGTCCTCTGCTA 208
************************************************************
consensus_9208#0 GTTGTGCAACATCATCCACCGGCGAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATC 479
consensus_9208#2 GTTGTGCAACATCATCCACCGGCGAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATC 318
consensus_9208#1 GTTGTGCAACATCATCCACCGGCGAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATC 268
************************************************************
consensus_9208#0 AAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGTCCGTTGTGACC 539
consensus_9208#2 AAGATAGATGGTATAGCTATCAACGCCAATGGGTATTCCTGGTTGCAGTCCGTTGTGACC 378
consensus_9208#1 AAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGTCCGTTGTGACC 328
************** *********************************************
consensus_9208#0 GGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAGATTGAATGC 599
consensus_9208#2 GGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAGATTGAATGC 438
consensus_9208#1 GGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAGATTGAATGC 388
************************************************************
consensus_9208#0 CGTGTCTGTATAAACGATTCGAAAAAGCACATAGATGTTGGTGAAGCATTGCTTAGCCTA 659
consensus_9208#2 CGTGTCTGTATAAACGATTCGAAAAAGCAGATAGATGTTGGTGAAGCATTGCTTAGCCTA 498
consensus_9208#1 CGTGTCTGTATAAACGATTCGAAAAAGCAAATAGATGTTGGTGAAGCATTGCTTAGCCTA 448
***************************** ******************************
consensus_9208#0 GGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGTCCGAAATCGAAAAGATGTGCAC 719
consensus_9208#2 GGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGTACAAAATCGAAAAGATGTGCAC 558
consensus_9208#1 GGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGACCGAAATCGAAAAGATGTGCAC 508
************************************* * *******************
consensus_9208#0 GCTGTCGCACTATATCAATATTATCGAACGTTGGCCAAGGCTGAACAGTACGCCAAGGAT 779
consensus_9208#2 GCTGTCGCACTATATCAATATTATCGAACGTTGGCCAAAGCTGAACGGTACGCCAAGGAT 618
consensus_9208#1 GCTGTCGCACTATATCAATATTATCGAACGTTGGCCAAGGCTGAACAGTACGCCAAGGAT 568
************************************** ******* *************
consensus_9208#0 CGTCGCAATGGTTT--GTGGCAAAGTT-CGTTGGGTCCCC-GGGTTTGG-CCACTATCCT 834
consensus_9208#2 CGTCGCAATGGTTT--GTGGCAAAGTT-CGTTGGGCCCCC-GGGTTTGG-CCACTATCCT 673
consensus_9208#1 CGTCGCAATGGGTTTGGTGGCAAAGNTTCGTTGGGTCCCCCGGGTTTGGGCCACTATCCT 628
*********** ** ********* * ******* **** ******** **********
consensus_9208#0 TGTGGCCTGTA-TTGTGGGATCGTGTGACCAACCCCAACCGCG-TGCCGGCGCTTGTTCG 892
consensus_9208#2 ------------------------------------------------------------
consensus_9208#1 TGTGGCCTGTAATTGTGGGATCGTGTGACCAAGCCGAACCGGGGTGCCGGGGCGCCTTTG 688
consensus_9208#0 AT---GATACACTG--------TTCCAATCTAT-----GGTTCACTAAAGTGAGTGAGAA 936
consensus_9208#2 ------------------------------------------------------------
consensus_9208#1 GTTCGAATGGATTGCACTTGGTTCCCAATTCTTATTGGGGTCCACGTACGCAGGTGGANG 748
consensus_9208#0 ATAATAGAAAACTTGCAGTATGTGTAATGCATATTTTCTGTTG-----GTGCCTTAAGCT 991
consensus_9208#2 ------------------------------------------------------------
consensus_9208#1 TTGAGGAAACAGTTGAGTTCAGGAANANACTCTTGGGCCNAGGAAAAGGTTNGTCAAATT 808
consensus_9208#0 TGTATA-TCTATGACAG--AAAAAGCAATCAATAAAATGTT------ACAAATC------ 1036
consensus_9208#2 ------------------------------------------------------------
consensus_9208#1 GCCATNATNNGTGCCAGGTAGGGGNTGGCCCTTGAAAGGCCTTGGTGAAGAATCCNTAGT 868
consensus_9208#0 --------------------------
consensus_9208#2 --------------------------
consensus_9208#1 TGGCACCNGGAAAGAAAAAGGCATTG 894
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||