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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9215#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1042 fasta sequence
[AGTTTTAAAGACGAAAATGATAACACCAATTCTTCGGTTTTAGGCGGCTTCCGTGTAAATTGGCGTGCAATTTGTAATCTGTACTGAAAATAGAATATCAAGTGTGTCTCCTCAATAGTGTAAGCATAGAATTTTGTAAGCCACAATGTTAAACGCACTCGGTGTGATTGTATCCGGTCGATTGGTTCAAACCGATTTCCAGCAGATAAGTGATTCCCACTTTCT--AAT-TACCATCCCGGATGCGGACAACGTGAACCATGTGGTGGTGTTTCTCACCGGGACCACTCCGTTTCCGGACGGTATGGCTGGAGGAGTCTACTTCAGCTGGCCGGACCCGAATGCACCGCCCAACTGGCAGCTGCTTGGCTACATTTCCAACACGAAACCGTCGGCTATCTTTAAAATATCGCAGCTCAAGAAGCTGGACGAAATAGCTGGCCAGTCCACGA-TGATGAACAACGTTTTCGGCAGCAATCTGCCCATCTCACATATCGCCCAGATCGGTGTGTCGATCGAGCCGGAAAGCTCGCTCGTGCAGCAAACGCCATCGACGACAACGTCCAGCACGTACTACCAGTTCGGCCAGAAGATAGTGGAGAACTTTTTCAACTTCGTTAGCAGCTTCTCGATAACGCAAAGCCAAATGACGCCGGCGCCGAACGAAACGTTCGTGCCACTGTCGACGGTGCAAACGTGGTACACCAACTTCGAGCGGCGG-TTGCAACAAAATCCAAACTTTTGGAAAAACTAAAAA--------A-CGCGATACGGGTTAGTGCGACATGTTCGGAATGGCCTTACGGGGTGGGTTGTTCTTTTCTTCGCGTCCCGGTTCCGTCGAAGGCGTCGCA-TTG------GAAG-CAAACCGCATCCTTCACTAA-A-AAAGCACTGGTTTTAATCATCCTCTAGCCTTAAATGCCTACTTCGTTCTAGCATCTTTATTTCTTTTGTAAACATTCATCAAACGCGTCATTAAATGCGATAGATTTTGTGTTGATTTTCAGTAATAAAAAAAAAAAAAAAAAAAAAAAACATGTGCCCGAGCTGCGGG]
[+] EMBL CNS09F58 [AGTTTTAAAGACGAAAATGATAACACCAATTCTTCGGTTTTAGGCGGCTTCCGTGTAAATTGGCGTGCAATTTGTAATCTGTACTGAAAATAGAATATCAAGTGTGTCTCCTCAATAGTGTAAGCATAGAATTTTGTAAGCCACAATGTTAAACGCACTCGGTGTGATTGTATCCGGTCGATTGGTTCAAACAGATTTCCAGCAGATAAGTGATTCCCACTTTCT AAT TACCATCCCGGATGCGGACAACGTGAACCATGTGGTGGTGTTTCTCACCGGGACCACTCCGTTTCCGGACGGTATGGCTGGAGG TACTTCAGCTGGCCGGACCCGAATGCACCGCCCAACTGGCAGCTGCTTGGCTACATTTCCAACACGAAACCGTCGGCTATCTTTAAAATATCGCAGCTCAAGAAGCTGGACGAAATAGCTGGCCAGTCCACGA TGATGAACAACGTTTTCGGCAGCAATCTGCCCATCTCACATATCGCCCAGATCGGTGTGTCGATCGAGCCGGAAAGCTCGCTCGTGCAGCAAACGCCATCGACGACAACGTCCAGCACGTACTACCAGTTCGGCCAGAAGATAGTGGAGAACTTTTTCAACTTCGTTAGCAGCTTCTCGATAACGCAAAGCCAAATGACGCCGGCGCCGAACGAAACGTTCGTGCCACTGTCGACGGTGCAAACGTGGTACACCAACTTCGAGCGGCGG TTGCAACAAAATCCAAACTTTTGGAAAAACTAAAAA A CGCGATACGGGTTAGTGCGACATGTTCGGAATGGCCTTACGGGGTGGGTTGTTCTTTTCTTCCCGTCCCGGTTCCGTCGAAGGCGTCGCA TTG GAAG CAAACCGCATCCTTCACTAA A AAAGCACTGGTTTTAATCATCCTCTAGCCTTAAATGCCTACTTCGTTCTAGCATCTTTATTTCTTTTGTAAACATTCATCAAACGCGTCATTAAATGCGATAGATTTTGTGTTGATTTTCAGTAATAAAAAAAAAAAAAAAAAAAAAAAA ]
[+] EMBL CNS09J4E [ AAAACGAAAATGATAACACCAATTCTTCGGTTTTAGGCGGCTTCCGTGTAAATTGGCGTGCAATTTGTAATCTGTACTGAAAATAGAATATCAAGTGTGTCTCCTCAATAGTGTAAGCATAGGATTTTGTAAGCCACAATGTTAAACGCACTCGGTGTGATTGTATCCGGTCGATTGGTTCAAACCGATTTCCAGCAGATAAGTGATTCCCACTTTCTCGACTCTACCATCCCGGATGCGGACAACGTGAACCATGTGGTTGTGTTTCTCACCGGGACCACCCCGTTTCCGGACGGTATGGCTGGAGGAGTCTACTTCAGCTGGCCGGACCCGAATGCACCGCCCAACTGGCAGCTGCTCGGCTACATTTCCAACACGAAACCGTCGGCTATCTTTAAAATATCGCAGCTCAAGAAGCTGGACGAAATAGCTGGCCAGTCCACGA TGATGAACAACGTTTTCGGCAGCAATCTGCCCATCTCACATATCGCCCAGATCGGTGTGTCGATCGAGCCGGAAAGCTCGCTCGTGCAGCAAACGCCATCGACGACAACGTCCAGCACGTACTACCAGTTCGGCCAGAAGATAGTGGAGAACTTTTTCAACTTCGTTAGCAGCTTCTCGATAACGCAAAGCCAAATGACGCCGGCACCGAACGAAACGTTCGTGCCACTGTCGACGGTGCAAACGTGGTACACCAACTTCGAGCGGCGG TTGCAACAAAATCCAAACTTTTGGAAAAACTAAAAACGCACGTGATCGCGATACGGGTTAGTGCGACATGTTCGGTATGGCCTTACGGGGTGGGT TT TTTCCTTGGCGT ]
[+] EMBL CNS08FNQ [ AAAATGATAACACCAATTCTTCGGTTTTAGGCGGCTTCCGTGTAAATTGGCGTGCAATTTGTAATCTGTACTGAAAATAGAATATCAAGTGTGTCTCCTCAATAGTGTAAGCATAGGATTTTGCAAGCCACAATGTTAAACGCACTCGGTGTGATTGTATCCGGTCGATTGGTTCAAACCGATTTCCAGCAGATAAGTGATTCCCACTTTCT GAT TACCATCCCGGATGCGGACAACGTGAACCATGTGGTTGTGTTTCTCACCGGGACCACCCCGTTTCCGGACGGTATGGCTGGAGGAGTCTACTTCAGCTGGCCGGACCCGAATGCACCGCCCAACTGGCAGCTGCTCGGCTACATTTCCAACACGAAACCGTCGGCTATCTTTAAAATATCGCAGCTCAAGAAGCTGGACGAAATAGCTGGCCAGTCCACGA TGATGAACAACGTTTTCGGCAGCAATCTGCCCATCTCACATATCGCCCAGATCGGTGTGTCGATCGAGCCGGAAAGCTCGCTCGTGCAGCAAACGCCATCGACGACAACGTCCAGCACGTACTACCAGTTCGGCCAGAAGATAGTGGAGAACTTTTTCAACTTCGTTAGCAGCTTCTCGATAACGCAAAGCCAAATGACGCCGGCACCGAACGAAACGTTCGTGCCACTGTCGACGGTGCAAACGTGGTACACCAACTTCGAGCGGCGG TTGCAACAAAATCCAAACTTTTGGAAAAACTAAAAACGCACGTGATCGCGATACGGGTTAGTGCGACATGTTCGGTATGGCCTTACGGGGTGGGT TT TTTCCTTGGCGTCCCGGTTCCG ATACGCGTCGCA TTGAACGGCGCAGTCAAACCGCATCCTTCACTAA A AAAGCACTGGTTTTAATCATCCTCTAGCCTTAAATGCCTACTTCGTTCTAG ]
[-] EMBL CNS09OKF [ CTTCCGTGTAAATTGGCGTGCAATTTGTAATCTGTACTGAAAATAGAATATCAAGTGTGTCTCCTCAATAGTGTAAGCATAGAATTTTGTAAGCCACAATGTTAAACGCACTCGGTGTGATTGTATCCGGTCGATTGGTTCAAACAGATTTCCAGCAGATAAGTGATTCCCACTTTCT AAT TACCATCCCGGATGCGGACAACGTGAACCATGTGGTGGTGTTTCTCACCGGGACCACTCCGTTTCCGGACGGTATGGCTGGAGGAGTCTACTTCAGCTGGCCGGACCCGAATGCACCGCCCAACTGGCAGCTGCTTGGCTACATTTCCAACACGAAACCGTCGGCTATCTTTAAAATATCGCAGCTCAAGAAGCTGGACGAAATAGCTGGCCAGTCCACGA TGATGAACAACGTTTTCGGCAGCAATCTGCCCATCTCACATATCGCCCAGATCGGTGTGTCGATCGAGCCGGAAAGCTCGCTCGTGCAGCAAACGCCATCGACGACAACGTCCAGCACGTACTACCAGTTCGGCCAGAAGATAGTGGAGAACTTTTTCAACTTCGTTAGCAGCTTCTCGATAACGCAAAGCCAAATGACGCCGGCGCCGAACGAAACGTTCGTGCCACTGTCGACGGTGCAAACGTGGTACACCAACTTCGAGCGGCGG TTGCAACAAAATCCAAACTTTTGGAAAAACTAAAAA A CGCGATACGGGTTAGTGCGACATGTTCGGAATGGCCTTACGGGGTGGGTTGTTCTTTTCTTCCCGTCCCGGTTCCGTCGAAGGCGTCGCA TTG GAAG CAAACCGCATCCTTCACTAA A AAAGCACTGGTTTTAATCATCCTCTAGCCTTAAATGCCTACTTCGTTCTAGCATCTTTATTTCTTTTGTAAACATTCATCAAACGCGTCATTAAATGCG ]
[+] EMBL BX610031 [ GTGTAAATTGGCGTGCAATTTGTAATCTGTACTGAAAATAGAATATCAAGTGTGTCTCCTCAATAGTGTAAGCATAGAATTTTGTAAGCCACAATGTTAAACGCACTCGGTGTGATTGTATCCGGTCGATTGGTTCAAACCGATTTCCAGCAGATAAGTGATTCCCACTTTCT AAT TACCATCCCGGATGCGGACAACGTGAACCATGTGGTGGTGTTTCTCACCGGGACCACTCCGTTTCCGGACGGTATGGCTGGAGGATTCTACTTCAGCTGGCCGGACCCGAATGCACCGCCCAACTGGCAGCTGCTTGGCTACATTTCCAACACGAAACCGTCGGCTATCTTTAAAATATCGCAGCTCAAGAAGCTGGACGAAATAGCTGGCCAGTCCACGA TGATGAACAACGTTTTCGGCAGCAATCTGCCCATCTCACATATCGCCCAGATCGGTGTGTCGATCGAGCCGGAAAGCTCGCTCGTGCAGCAAACGCCATCGACGACAACGTCCAGCACGTACTACCAGTTCGGCCAGAAGATAGTGGAGAACTTTTTCAACTTTGTTAGCAGCTTCTCGATAACGCAAAGCCAAATGACGCCGGCGCCGAACGAAACGTTC ]
[+] EMBL CNS09OKE [ AAATTGGCGTGCAATTTGTAATCTGTACTGAAAATAGAATATCAAGTGTGTCTCCTCAATAGTGTAAGCATAGAATTTTGTAAGCCACAATGTTAAACGCACTCGGTGTGATTGTATCCGGTCGATTGGTTCAAACAGATTTCCAGCAGATAAGTGATTCCCACTTTCT AAT TACCATCCCGGATGCGGACAACGTGAACCATGTGGTGGTGTTTCTCACCGGGACCACTCCGTTTCCGGACGGTATGGCTGGAGGAGTCTACTTCAGCTGGCCGGACCCGAATGCACCGCCCAACTGGCAGCTGCTTGGCTACATTTCCAACACGAAACCGTCGGCTATCTTTAAAATATCGCAGCTCAAGAAGCTGGACGAAATAGCTGGCCAGTCCACGA TGATGAACAACGTTTTCGGCAGCAATCTGCCCATCTCACATATCGCCCAGATCGGTGTGTCGATCGAGCCGGAAAGCTCGCTCGTGCAGCAAACGCCATCGACGACAACGTCCAGCACGTACTACCAGTTCGGCCAGAAGATAGTGGAGAACTTTTTCAACTTCGTTAGCAGCTTCTCGATAACGCAAAGCCAAATGACGCCGGCGCCGAACGAAACGTTCGTGCCACTGTCGACGGTGCAAACGTGGTACACCAACTTCGAGCGGCGG TTGCAACAAAATCCAAACTTTTGGAAAAACTAAAAA A CGCGATACGGGTTAGTGCGACATGTTCGGAATGGCCTTACGGGGTGGGTTGTTCTTTTCTTCCCGTCCCGGTTCCGTCGAAGGCGTCGCATTTG GAAG CAAACCGCATCCTTCACTAA A AAAGCACTGGTTTTAATCATCCTCTAGCCTTAAATGCCTACTTCGTTCTAGCATCTTTATTTCTTTTGTAAACATTCATCAAACGCGTCATTAAATGCGATAGATTTTGTGTTGATTTTCAGTAATTTCAAAATAAAAAAAAAAAGGCCACATGTGCCCGAGCTGCGGG]
[-] EMBL CNS09F59 [ ACTGAAAATAGAATATCAAGTGTGTCTCCTCAATAGTGTAAGCATAGAATTTTGTAAGCCACAATGTTAAACGCACTCGGTGTGATTGTATCCGGTCGATTGGTTCAAACAGATTTCCAGAAGATAAGTGATTCCCACTTTCT AAT TACCATCCCGGATGCGGACAACGTGAACCATGTGGTGGTGTTTCTCACCGGGACCACTCCGTTTCCGGACGGTATGGCTGGAGG TACTTCAGCTGGCCGGACCCGAATGCACCGCCCAACTGGCAGCTGCTTGGCTACATTTCCAACACGAAACCGTCGGCTATCTTTAAAATATCGCAGCTCAAGAAGCTGGACGAAATAGCTGGCCAGTCCACGA TGATGAACAACGTTTTCGGCAGCAATCTGCCCTTTTCACATATCGCCCAGATCGGTGTGTCGATCGAGCCGGAAAGCTCGCTCGTGCAGCAAACGCCATCGACGACAACGTCCAGCACGTACTACCAGTTCGGCCAGAAGATAGTGGAGAACTTTTTCAA TTCGTTAGCAGCTTCTCGATAACGCAAAGCCAAATGACGCCGGCGCCGAACGAAACGTTCGTGCCACTGTCGACGGTGCAAACGTGGTACACCAACTTCGAGCGGCGG TTGCAACAAAATCCAAACTTTTGGAAAAACTAAAAA A CGCGATACGGGTTAGTGCGACATGTTCGGAATGGCCTTACGGGGTGGGTTGTTCTTTTCTTC CCTCCCGGTTCCGTCGAAGGCGTCGCA TTG GAAG CAAACCGCATCCTTCACTAA A AAAGAACTGGTTTTAATCATCCTCTAGCCTTAAATGCCTA TTCGTTCTAGCATCTTTATTTCTTTTGTAAACATTCATCAAACGCGTCATTAAATGCGATAGATTTTGTGT ]
[-] EMBL CNS08FNR [ TGTCTCCTCAATAGTGTAAGCATAGGATTTTGCAAGCCACAATGTTAAACGCACTCGGTGTGATTGTATCCGGTCGATTGGTTCAAACCGATTTCCAGCAGATAAGTGATTCCCACTTTCT GAT TACCATCCCGGATGCGGACAACGTGAACCATGTGGTTGTGTTTCTCACCGGGACCACCCCGTTTCCGGACGGTATGGCTGGAGGAGTCTACTTCAGCTGGCCGGACCCGAATGCACCGCCCAACTGGCAGCTGCTCGGCTACATTTCCAACACGAAACCGTCGGCTATCTTTAAAATATCGCAGCTCAAGAAGCTGGACGAAATAGCTGGCCAGTCCACGA TGATGAACAACGTTTTCGGCAGCAATCTGCCCTTCTCACATATCGCCCAGATCGGTGTGTCGATCGAGCCGGAAAGCTCGCTCGTGCAGCAAACGCCATCGACGACAACGTCCAGCACGTACTACCAGTTCGGCCAGAAGATAGTGGAGAACTTTTTCAACTTCGTTAGCAGCTTCTCGATAACGCAAAGCCAAATGACGCCGGCACCGAACGAAACGTTCGTGCAACTGTCGACGGTGCAAACGTGGTACACCAACTTCGAGCGGCGG TTGCAACAAAATCCAAACTTTTGGAAAAACTAAAAACGCACGTGATCGCGATACGGGTTAGTGCGACATGTTCGGTATGGCCTTACGGGGTGGGT TT TTTCCTTGGCGTCCCGGTTCCG ATACGCGTCGCA TTGAACGGCGCAGTCAAACCGCATCCTTCACTAA A AAAGAACTGGTTTTAATCATCCTCTAGCCTTAAATGCCTACTTCGTTCTAGCATCTTTATTTCTTTTGTAAACATTCATCAAACGCGTCATTAAATGCGATAGATTTTGTGT ]
[-] EMBL CNS09J4F [ TCAAACCGATTTCCAGGAGATAAGTGATTCCCACTTTCT GAT TACCATCCCGGATGCGGACAACGTGAACCATGTGGTTGTGTTTCTCACCGGGACCACCCCGTTTCCGGACGGTATGGCTGGAGGAGTCTACTTCAGCTGGCCGGACCCGAATGCACCGCCCCACTGGCAGCTGCTCGGCTACATTTCCAACACGAAACCGTCGGCTATCTTTAAAATATCGCAGCTCAAGAAGCTGGACGAAATAGCTGGCCAGTCCACGAGTGATGAACAACGTTTTCGGCAGCAATCTGCCCTTTTCACATATCGCCCAGATCGGTTTGTCGATCGAGCCGGAAGGCTCGCTCGTGCAGCAAACGCCATCGACGACAACGTCCAGCACGTACTACCAGTTCGGCCAGAAGATAGTGGAGAACTTTTTCAACTTCGTTAGAAGCTTCTCGATAACGCAAAGCCAAATGACGCCGGCACCGAACGAAACGTTCGTGCAACTGTCGACGGTGCAAACGTGGTACACCAACTTCGAGCGGCGGTTTGCAACAAAATCCAAACTTTTGGAAAAACTAAAAACGCACGTGATCGCGATACGGGTGGGGGCGACATGTTCGGTATGGCCTTACGGGGTGGGT TT TTTCCTTGGCGTCCCGGTTCC CATACGCGTCGCA TTGAACGGCGCAGTCAAACCGCATCCTTCACTAAGAGAAAGAACTGGTTTTAATCATCCTCTAGCCTTAAA ]
[+] EMBL BX611991 [ GTCTACTTCAGCTGGCCGGACCCGAATGCACCGCCCAACTGGCAGCTGCTTGGCTACATTTCCAACACGAAACCGTCGGCTATCTTTAAAATATCGCAGCTCAAGAAGCTGGACGAAATAGCTGGCCAGTCCACGA TGATGAACAACGTTTTCGGCAGCAATCTGCCCATCTCACATATCGCCCAGATCGGTGTGTCGATCGAGCCGGAAAGCTCGCTCGTGCAGCAAACGCCATCGACGACAACGTCCAGCACGTACTACCAGTTCGGCCAGAAGATAGTGGAGAACTTTTTCAACTTTGTTAGCAGCTTCTCGATAACGCAAAGCCAAATGACGCCGGCGCCGAACGAAACGTTCGTGCCACTGTCGACGGTGCAAACGTGGTACACCAACTTCGAGCGGCGG TTGCAACAAAATCCAAACTTTTGGAAAAACTAAAAA A CGCGATACGGGTTAGTGCGACATGTTCGGAATGGCCTAACGGGGTGGGTTGTTCCTTTCTTCGCGTCCCGGTTCCGTCGAAGGCGTCGCA TTG GAAG CAAACCGCATCCTTCACTAA A AAAGCACTGGTTTTAATCATCCTCTAGCCTTAAATGCCTACTTCGTTCTAGCATCTTTATTTCTTTTGTAAACATTCATCAAACGCGTCATTAAATGCGATAGATTTTGTGTT ]
consensusID : consensus_9215#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 588 fasta sequence
[CAGATCGCCCGAGGTGTTTTAGGCGGCTTCCGTGTAAATTGGCGTGCAATTTGTAATCTGTACTGAAAATAGAATATCAAGTGTGTCTCCTCAATAGTGTAAGCATAGGATTTTGTAAGCCACAATGTTAAACGCACTCGGTGTGATTGTATCCGGTCGATTGGTTCAAACCGATTTCCAACAGATAAGTGATTCCCACTTTCTAATTACCATCCCGGATGCGGACAACGTGAACCATGTGGTGGTGTTTCTCACCGGGACTACCCCGTTTCCGGATGGTATGGCTGGAGGAGTCTACTTCAGCTGGCCGGACCCGAACGCACCGCCCAACTGGCAGTTGCTCGGCTACATTTCCAACACGAAACCGTCGGCTATCTTTAAAATATCGCAGCTCAAGAAGCTGGACGAAATAGCTGGCCAGTCCACGATGATGAACAACGTTTTCGGCAGCAATCTGCCCATCTCACATATCGCCCAGATCGGTGTGTCAATCGAGCCGGAAAGCTCGCTCGTGCAGCAAACGCCATCGACGACAACGTCCAGCACGTACTACCAGTTCGGCCAGAAGATAGTGGAGAACTTTTTCAA]
[+] EMBL AL930130 [CAGATCGCCCGAGGTGTTTTAGGCGGCTTCCGTGTAAATTGGCGTGCAATTTGTAATCTGTACTGAAAATAGAATATCAAGTGTGTCTCCTCAATAGTGTAAGCATAGGATTTTGTAAGCCACAATGTTAAACGCACTCGGTGTGATTGTATCCGGTCGATTGGTTCAAACCGATTTCCAACAGATAAGTGATTCCCACTTTCTAATTACCATCCCGGATGCGGACAACGTGAACCATGTGGTGGTGTTTCTCACCGGGACTACCCCGTTTCCGGATGGTATGGCTGGAGGAGTCTACTTCAGCTGGCCGGACCCGAACGCACCGCCCAACTGGCAGTTGCTCGGCTACATTTCCAACACGAAACCGTCGGCTATCTTTAAAATATCGCAGCTCAAGAAGCTGGACGAAATAGCTGGCCAGTCCACGATGATGAACAACGTTTTCGGCAGCAATCTGCCCATCTCACATATCGCCCAGATCGGTGTGTCAATCGAGCCGGAAAGCTCGCTCGTGCAGCAAACGCCATCGACGACAACGTCCAGCACGTACTACCAGTTCGGCCAGAAGATAGTGGAGAACTTTTTCAA]
[+] EMBL BM596431 [ ccgGGCGGCTTCCGTGTAAATTGGCGTGCAATTTGTAATCTGTACTGAAAATAGAATATCAAGTGTGTCTCCTCAATAGTGTAAGCATAGGATTTTGTAAGCCACAATGTTAAACGCACTCGGTGTGATTGTATCCGGTCGATTGGTTCAAACCGATTTCCAACAGATAAGTGATTCCCACTTTCTAATTACCATCCCGGATGCGGACAACGTGAACCATGTGGTGGTGTTTCTCACCGGGACTACCCCGTTTCCGGATGGTATGGCTGGAGGAGTCTACTTCAGCTGGCCGGACCCGAACGCACCGCCCAACTGGCAGTTGCTCGGCTACATTTCCAACACGAAACCGTCGGCTATCTTTAAAATATCGCAGCTCAAGAAGCTGGACGAAATAGCTGGCCAGTCCACGATGATGAACAACGTTTTCGGCAGCAATCTGCCCATCTCACATATCGCCCAGATCGGTGTGTCAATCGAGCCGGAAAGCTCGCTCGTGCAGCAAA ]
[+] EMBL BX614168 [ GCGGCTTCCGTGTAAATTGGCGTGCAATTTGTAATCTGTTCTGAAAATAGAATATCAAGTGTGTCTCCTCAATAGTGTAAGCATAGGATTTTGTAAGCCACAATGTTAAACGCACTCGGTGTGATTGTATCCGGTCGATTGGTTCAAACCGATTTCCAACAGATAAGTGATTCCCACTTTCTAATTACCATCCCGGATGCGGACAACGTGAACCATGTGGTGGTGTTTCTCACCGGGACTACCCCGTTTCCGGATGGTATGGCTGGAGTAGTCTACTTCAGCTGGCCGGACCCGAACGCACCGCCCAACTGGCAGTTGCTCGGCTACATTTCCAACACGAAACCGTCGGCTATC ]
consensusID : consensus_9215#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 562 fasta sequence
[GCAGAATCGGCACGTGGAAAATGATA-ACACCAATTCTTCGGTTTTA-GGCGGCTTCCGTGTAAATTGGCGTGCAATTTGTAATCTGTACTGAAAATAGAATATCAAGTTTGTCTCCTCAATAGTGTAAGCATAGGATTTTGTAAGCCACAATGTTAAACGCACTCGGT-GTGATTGTATCCGGTCGATTGGTTCAAACCGACTTTCCAACAGATAAGTGATTCCCACTTTCTAATTACCATCCCGGATGCGGACAACGTGAACCATGTGGTGGTGTTTCTCACCGGGACTACCCCGTTTCCGGATGGTATGGCTGGAGGAGTCTACTTCAGCTGGCCGGACCCGAACGCACCGCCAACTGGCAGTTGCTCGGCTACATTTCCAACACGAAACCGTCGGCTATCTTTAAAATATCGCAGCTCAAGAAGCTGGACGAAATAGCTGGCCAGTCCACGATGATGAACAACGTTTTCGGCAGCAATCTGCCCATCTCACATATCGCCCAGATCGGTGTGTCAGTCGAGCCGGAAAGCTCGCTCGTGCAGCNAAACGCCATCGACGACGA]
[+] EMBL BX469883 [GCAGAATCGGCACGTGGAAAATGATA ACACCAATTCTTCGGTTTTA GGCGGCTTCCGTGTAAATTGGCGTGCAATTTGTAATCTGTACTGAAAATAGAATATCAAGTTTGTCTCCTCAATAGTGTAAGCATAGGATTTTGTAAGCCACAATGTTAAACGCACTCGGT GTGATTGTATCCGGTCGATTGGTTCAAACCGACTTTCCAACAGATAAGTGATTCCCACTTTCTAATTACCATCCCGGATGCGGACAACGTGAACCATGTGGTGGTGTTTCTCACCGGGACTACCCCGTTTCCGGATGGTATGGCTGGAGGAGTCTACTTCAGCTGGCCGGACCCGAACGCACCGCCAACTGGCAGTTGCTCGGCTACATTTCCAACACGAAACCGTCGGCTATCTTTAAAATATCGCAGCTCAAGAAGCTGGACGAAATAGCTGGCCAGTCCACGATGATGAACAACGTTTTCGGCAGCAATCTGCCCATCTCACATATCGCCCAGATCGGTGTGTCAGTCGAGCCGGAAAGCTCGCTCGTGCAGCNAAACGCCATCGACGACGA]
[+] EMBL AL696799 [ AGCAGATCGCAGAGGTTATACA CAATTCTTCGGTTTTACGGCGGCTTCCGTGTAAATTGGCGTGCAATTTGTAATCTGTACTGAAAATAGAATATCAAGTGTGTCTCCTCAATAGTGTAAGCATAGGATTTTGTAAGCCACAATGTTAAACGCACTCGGTGGTGATTGTATCCGGTCGATTGGTTCAAACCGA TTTCCAACAGATAAGTGATTCCCACTTTCTAATTACCATCCCGGATGCGGACAACGTGAACCATGTGGTGGTGTTTCTCACCGGGACTACCCCGTTTCCGGATGGTATGGCTGGAGGAGTCTACTTCAGCTGGCCGGACCCGAACGCACCGCCAACTGGCAGTTGCTCGGCTACATTTCCAACACGAAACCGTCGGCTATCTTTAAAATATCGCAGCTCAAGAAGCTGGACGAAATAGCTGGCCAGTCCACGATGATGAACAACGTTTTCGGCAGCAATCTG ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9215#0 ----AGTTTTAAAGACGAAAATGATAACACCAATTCTTCGGTTTTAGGCGGCTTCCGTGT 56
consensus_9215#1 -------------------------CAGATCGCCCGAGGTGTTTTAGGCGGCTTCCGTGT 35
consensus_9215#2 GCAGAATCGGCACGTGGAAAATGATAACACCAATTCTTCGGTTTTAGGCGGCTTCCGTGT 60
* * * ********************
consensus_9215#0 AAATTGGCGTGCAATTTGTAATCTGTACTGAAAATAGAATATCAAGTGTGTCTCCTCAAT 116
consensus_9215#1 AAATTGGCGTGCAATTTGTAATCTGTACTGAAAATAGAATATCAAGTGTGTCTCCTCAAT 95
consensus_9215#2 AAATTGGCGTGCAATTTGTAATCTGTACTGAAAATAGAATATCAAGTTTGTCTCCTCAAT 120
*********************************************** ************
consensus_9215#0 AGTGTAAGCATAGAATTTTGTAAGCCACAATGTTAAACGCACTCGGTGTGATTGTATCCG 176
consensus_9215#1 AGTGTAAGCATAGGATTTTGTAAGCCACAATGTTAAACGCACTCGGTGTGATTGTATCCG 155
consensus_9215#2 AGTGTAAGCATAGGATTTTGTAAGCCACAATGTTAAACGCACTCGGTGTGATTGTATCCG 180
************* **********************************************
consensus_9215#0 GTCGATTGGTTCAAACCGA-TTTCCAGCAGATAAGTGATTCCCACTTTCTAATTACCATC 235
consensus_9215#1 GTCGATTGGTTCAAACCGA-TTTCCAACAGATAAGTGATTCCCACTTTCTAATTACCATC 214
consensus_9215#2 GTCGATTGGTTCAAACCGACTTTCCAACAGATAAGTGATTCCCACTTTCTAATTACCATC 240
******************* ****** *********************************
consensus_9215#0 CCGGATGCGGACAACGTGAACCATGTGGTGGTGTTTCTCACCGGGACCACTCCGTTTCCG 295
consensus_9215#1 CCGGATGCGGACAACGTGAACCATGTGGTGGTGTTTCTCACCGGGACTACCCCGTTTCCG 274
consensus_9215#2 CCGGATGCGGACAACGTGAACCATGTGGTGGTGTTTCTCACCGGGACTACCCCGTTTCCG 300
*********************************************** ** *********
consensus_9215#0 GACGGTATGGCTGGAGGAGTCTACTTCAGCTGGCCGGACCCGAATGCACCGCCCAACTGG 355
consensus_9215#1 GATGGTATGGCTGGAGGAGTCTACTTCAGCTGGCCGGACCCGAACGCACCGCCCAACTGG 334
consensus_9215#2 GATGGTATGGCTGGAGGAGTCTACTTCAGCTGGCCGGACCCGAACGCACCGCC-AACTGG 359
** ***************************************** ******** ******
consensus_9215#0 CAGCTGCTTGGCTACATTTCCAACACGAAACCGTCGGCTATCTTTAAAATATCGCAGCTC 415
consensus_9215#1 CAGTTGCTCGGCTACATTTCCAACACGAAACCGTCGGCTATCTTTAAAATATCGCAGCTC 394
consensus_9215#2 CAGTTGCTCGGCTACATTTCCAACACGAAACCGTCGGCTATCTTTAAAATATCGCAGCTC 419
*** **** ***************************************************
consensus_9215#0 AAGAAGCTGGACGAAATAGCTGGCCAGTCCACGATGATGAACAACGTTTTCGGCAGCAAT 475
consensus_9215#1 AAGAAGCTGGACGAAATAGCTGGCCAGTCCACGATGATGAACAACGTTTTCGGCAGCAAT 454
consensus_9215#2 AAGAAGCTGGACGAAATAGCTGGCCAGTCCACGATGATGAACAACGTTTTCGGCAGCAAT 479
************************************************************
consensus_9215#0 CTGCCCATCTCACATATCGCCCAGATCGGTGTGTCGATCGAGCCGGAAAGCTCGCTCGTG 535
consensus_9215#1 CTGCCCATCTCACATATCGCCCAGATCGGTGTGTCAATCGAGCCGGAAAGCTCGCTCGTG 514
consensus_9215#2 CTGCCCATCTCACATATCGCCCAGATCGGTGTGTCAGTCGAGCCGGAAAGCTCGCTCGTG 539
*********************************** ***********************
consensus_9215#0 CAGCAAA-CGCCATCGACGACAACGTCCAGCACGTACTACCAGTTCGGCCAGAAGATAGT 594
consensus_9215#1 CAGCAAA-CGCCATCGACGACAACGTCCAGCACGTACTACCAGTTCGGCCAGAAGATAGT 573
consensus_9215#2 CAGCNAAACGCCATCGACGACGA------------------------------------- 562
**** ** ************* *
consensus_9215#0 GGAGAACTTTTTCAACTTCGTTAGCAGCTTCTCGATAACGCAAAGCCAAATGACGCCGGC 654
consensus_9215#1 GGAGAACTTTTTCAA--------------------------------------------- 588
consensus_9215#2 ------------------------------------------------------------
consensus_9215#0 GCCGAACGAAACGTTCGTGCCACTGTCGACGGTGCAAACGTGGTACACCAACTTCGAGCG 714
consensus_9215#1 ------------------------------------------------------------
consensus_9215#2 ------------------------------------------------------------
consensus_9215#0 GCGGTTGCAACAAAATCCAAACTTTTGGAAAAACTAAAAAACGCGATACGGGTTAGTGCG 774
consensus_9215#1 ------------------------------------------------------------
consensus_9215#2 ------------------------------------------------------------
consensus_9215#0 ACATGTTCGGAATGGCCTTACGGGGTGGGTTGTTCTTTTCTTCGCGTCCCGGTTCCGTCG 834
consensus_9215#1 ------------------------------------------------------------
consensus_9215#2 ------------------------------------------------------------
consensus_9215#0 AAGGCGTCGCATTGGAAGCAAACCGCATCCTTCACTAAAAAAGCACTGGTTTTAATCATC 894
consensus_9215#1 ------------------------------------------------------------
consensus_9215#2 ------------------------------------------------------------
consensus_9215#0 CTCTAGCCTTAAATGCCTACTTCGTTCTAGCATCTTTATTTCTTTTGTAAACATTCATCA 954
consensus_9215#1 ------------------------------------------------------------
consensus_9215#2 ------------------------------------------------------------
consensus_9215#0 AACGCGTCATTAAATGCGATAGATTTTGTGTTGATTTTCAGTAATAAAAAAAAAAAAAAA 1014
consensus_9215#1 ------------------------------------------------------------
consensus_9215#2 ------------------------------------------------------------
consensus_9215#0 AAAAAAAAACATGTGCCCGAGCTGCGGG 1042
consensus_9215#1 ----------------------------
consensus_9215#2 ----------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||