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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9253#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 887 fasta sequence
[CGCTCGCGCACATGTGGCCTTTTTTTTATTTTTTTTTCCAACAGTTTTAAACACGATTTTATTGATTCTCTCAATTCATGATTCATAAACAAGCAAATTCAATCAAGCAAGTGCATTTGCGACCTTAACAACTACCATTACTGTCCCCTGACTGAGCCCCCTTGCCAAACTGCAATACTTTTTCGGCTTCCTGTTTGCTCCCCCTAGCCCAGCAGCTTATCAATGTCCTTCACAATGCTGCTGGGCGACGTTGTAGGCGCATAGCGATCCACCGGCTGACCGTCCTTGTTTACCAAAAACTTGGCAAAGTTCCACTTGATCGAATCACCCAAAGTGCCACCCTGCTTGTGCTTGAGATATTTGTAGAGCGGATGTGCGCCGTCACCGTTTACATCGATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAAAATTTTGAAATCCTTATCCGCGTACTTCTGCG-ATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCATTCTTGTAGTCTTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATTGATTTGGATATGAGAACGCACAATACTGAAATCGCCCGAGCGTATTACGTCCGATTGTGGCTAGCGTACGGAAAGTTGTAAAATTCCAGTAGGCCAACAGTGCTCGAGGAATTCCGCAGCCTTT]
[-] EMBL CNS09KHI [CGCTCGCGCACATGTGGCCTTTTTTTTATTTTTTTTTCCAACAGTTTTAAACACGATTTTATTGATTCTCTCAATTCATGATTCATAAACAAGCAAATTCAATCAAGCAAGTGCATTTGCGACCTTAACAACTACCATTACTGTCCCCTGACTGAGCCCCCTTGCCAAACTGCAATACTTTTTCGGCTTCCTGTTTGCTCCCCCTAGCCCAGCAGCTTATCAATGTCCTTCACAATGCTGCTGGGCGACGTTGTAGGCGCATAGCGATCCACCGGCTGACCGTCCTTGTTTACCAAAAACTTGGCAAAGTTCCACTTGATCGAATCACCCAAAGTGCCACCCTGCTTGTGCTTGAGATATTTGTAGAGCGGATGTGCGCCGTCACCGTTTACATCGATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTC CCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAAAATTTTGAAATCCTTATCCGCGTACTTCTGCG ATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCATTCTTGTAGTCTTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATTGATTTGGATATGAGAACGCACAATACTGAAATCGCCCGAGCGTATTACGTCCGATTGTGGCTAGCGT ]
[+] EMBL CNS09KHJ [ TTATTGATTCTCTCAATTCATGATTCATAAACAAGCAAATTCAATCAAGCAAGTGCATTTGCGACCTTAACAACTACCATTACTGTCCCCTGACTGAGCCCCCTTGCCAAACTGCAATACTTTTTCGGCTTCCTGTTTGCTCCCCCTAGCCCAGCAGCTTATCAATGTCCTTCACAATGCTGCTGGGCGACGTTGTAGGCGCATAGCGATCCACCGGCTGACCGTCCTTGTTTACCAAAAACTTGGCAAAGTTCCACTTGATCGAATCACCCAAAGTGCCACCCTGCTTGTGCTTGAGATATTTGTAGAGCGGATGTGCGCCGTCACCGTTTACATCGATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAAAATTTTGAAATCCTTATCCGCGTACTTCTGCGTATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCATTCTTGTAGTCTTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGA TGACTGTAGAACCGATTTACTCCGTATTGATTTGGATATGAGAACGCACAATACTGAAATCGCCCGAGCGTATTACGTCCGATTGTGGCTAGCGTACGGAAAGTTGTAAAATTCCAGTAGGCCAACAGTGCTCGAGGAATTCCGCAGCCTTT]
[-] EMBL BM593384 [ GCTTCCTGTTTGCTCCCCCTAGCCCAGCAGCTTATCAATGTCCTTCACAATGCTGCTGGGCGACGTTGTAGGCGCATAGCGATCCACCGGCTGACCGTCCTTGTTTACCAAAAACTTGGCAAAGTTCCACTTGATCGAATCACCCAAAGTGCCACCCTGCTTGTGCTTGAGATATTTGTAGAGCGGATGTGCGCCGTCACCGTTTACATCGATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAAAATTTTGAAATCCTTATCCGCGTACTTCTGCG ATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCATTCTTGTAGTCTTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATTGATTTGGATACGAGAACGCACAATACTGAAATCGCCCGAGCGTATTACGTCCGATTGTGGCgg ]
[-] EMBL BM590483 [ GGGCGACGTTGTAGGCGCATAGCGATCCACCGGCTGACCGTCCTTGTTTACCAAAAACTTGGCAAAGTTCCACTTGATCGAATCACCCAAAGTGCCACCCTGCTTGTGCTTGAGATATTTGTAGAGCGGATGTGCGCCGTCACCGTTTACATCGATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAAAATTTTGAAATCCTTATCCGCGTACTTCTGCG ATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCATTCTTGTAGTCTTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATTGATTTGGATACGAGAACGCACAATACTGAAATCGCCCGAGCGTATTACGTCCGATTGTGGCTAGCGTACcgg ]
consensusID : consensus_9253#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 780 fasta sequence
[CTGTTTAACATCTCTACGGTTTCCAGCAAGCTTATCGATGTCCTTAACGATACTCTTAGGCGAACGTGGTCGGTGCGTAGCGGTCCACCGGCTGT-CCGTCCTTGTTTACCAGGAACTTGGAGAAATTCCAT-TTAATTGAATCACCCAGAATTCCACCCTGCTTGTGCTTCAAATATTTGTACAACGGAT-CCGCATCGTCTCCGTTCACCTTAATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAGGATTTTGAAATCCTTAT-CCGCGTACTTCTGCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCGTTCTTGTAGTCCTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATTGATTTGGATACGAGAACGCACAATACTGAAATCGCCCGAGCGTATTACGTCCGATTGTG-GCTAGCGCGGGGAAAGTTGTGAAATTCGACATTAAAACAAAATGGATTGTTTATGTTCGCCGTTCGACGCCGGGCAGTTTTCACTGTTTACTCGAAAGACCGGTCACTCCAGTTCGCGTTCTGCGTGCGTGTGTGTGTACGG]
[-] EMBL BM628992 [CTGTTTAACATCTCTACGGTTTCCAGCAAGCTTATCGATGTCCTTAACGATACTCTTAGGCGAACGTGGTCGGTGCGTAGCGGTCCACCGGCTGTCCCGTCCTTGTTTACCAGGAACTTGGAGAAATTCCAT TTAATTGAATCACCCAGAATTCCACCCTGCTTGTGCTTCAAATATTTGTACAACGGATCCCGCATCGTCTCCGTTCACCTTAATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAGGATTTTGAAATCCTTATCCCGCGTACTTCTGCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCGTTCTTGTAGTCCTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATTGATTTGGATACGAGAACGCACAATACTGAAATCGCCCGAGCGTATTACGTCCGATTGTG GCTAGCGCGG ]
[-] EMBL BM644773 [ cgACGTGGTCGGTGCGTAGCGGTCCACCGGCTGT CCGTCCTTGTTTACCAGGAACTTGGAGAAATTCCAT TTAATTGAATCACCCAGAATTCCACCCTGCTTGTGCTTCAAATATTTGTACAACGGAT CCGCATCGTCTCCGTTCACCTTAATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAGGATTTTGAAATCCTTAT CCGCGTACTTCTGCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCGTTCTTGTAGTCCTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATTGATTTGGATACGAGAACGCACAATACTGAAATCGCCCGAGCGTATTACGTCCGATTGTG GCTAGC CGG ]
[-] EMBL AL930594 [ TGT CCGTCCTTGTTTACCAGGAACTTGGAGAAATNCCATGTTAATTGAATCACCCAGAATTCCACCCTGCTTGTGCTTCAAATATTTGTACAACGGAT CCGCATCGTCTCCGTTCACCTTAATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCA TTGGCCACCGAACTGATTGCAGGGGAAGGACAAAATTTTGAAATCCTTAT CCGCGTACTTCTGCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCATTCTTGTAGTCTTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATTGATTT GATACGAGAACGCACAATACTGAAATCGCCCGAGCGTATTACGTCCGATT TGACCTCGGGCG ]
[-] EMBL BM586196 [ TCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCGTTCTTGTAGTCCTCCATCGTACCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATTGATTTGGATACGAGAACGCACAATACTGAAATCGCCCGAGCGTATTACGTCCGATTGTG GCTAGCGTACGGAAAGTTGTGAAATTCGACATTAAAACAAAATGGATTGTTTATGTTCGCCGTTCGACGCCGGGCAGTTTTCACTGTTTACTCGAAAGACCGGTCACTCCAGTTCGCGTTCTGCGTGCGTGTGTGTGTACGG]
consensusID : consensus_9253#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 743 fasta sequence
[CTCAATTCATGATTCATAAACAAGCAAATTCAATCAAGCAAGTGCATTTGCGACCTTAACAACTACCATTACTGTCCCCTGACTGAGCCCCCTTGCCAAACTGCAATACTTTTTCGGCTTCCTGTTTGCTCCCCCTAGCCCAGCAGCTTATCAATGTCCTTCACAATGCTGCTGGGCGACGTTGTAGGCGCATAGCGATCCACCGGCTGACCGTCCTTGTTTACCAAAAACTTGGCAAAGTTCCACTTGATCGAATCACCCAAAGTGCCACCCTGCTTGTGCTTGAGATATTTGTAGAGCGGATGTGCGCCGTCACCGTTTACATCGATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAAAATTTTGAAATCCTTATCCGCGTACTTCTGCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCATTCTTGTAGTCTTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATGCTATTAATACACCCACTACGAACAGAAGGACACTTTTCGTCGAAAACAT]
[-] EMBL BX625235 [CTCAATTCATGATTCATAAACAAGCAAATTCAATCAAGCAAGTGCATTTGCGACCTTAACAACTACCATTACTGTCCCCTGACTGAGCCCCCTTGCCAAACTGCAATACTTTTTCGGCTTCCTGTTTGCTCCCCCTAGCCCAGCAGCTTATCAATGTCCTTCACAATGCTGCTGGGCGACGTTGTAGGCGCATAGCGATCCACCGGCTGACCGTCCTTGTTTACCAAAAACTTGGCAAAGTTCCACTTGATCGAATCACCCAAAGTGCCACCCTGCTTGTGCTTGAGATATTTGTAGAGCGGATGTGCGCCGTCACCGTTTACATCGATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAAAATTTTGAAATCCTTATCCGCGTACTTCTGCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCATTCTTGTAGTCTTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATGCTATTAATACACCCACTACGAACAGAAGGACACTTTTCGTCGAAAACAT]
[-] EMBL BM631152 [ TAGCGATCCACCGGCTGACCGTCCTTGTTTACCAAAAACTTGGCAAAGTTCCACTTGATCGAATCACCCAAAGTGCCACCCTGCTTGTGCTTGAGATATTTGTAGAGCGGATGTGCGCCGTCACCGTTTACATCGATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAAAATTTTGAAATCCTTATCCGCGTACTTCTGCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCATTCTTcgg ]
consensusID : consensus_9253#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 670 fasta sequence
[CTCCCCCTAGCCCAGCAGCTTATCAATGTCCTTCACAATGCTGCTGGGCGACGTTGTAGGCGCATAGCGATCCACCGGCTGACCGTCCTTGTTTACCAAAAACTTGGCAAAGTTCCACTTGATCGAATCACCCAAAGTGCCACCCTGCTTGTGCTTGAGATATTTGTAGAGCGGATGTGCGCCGTCACCGTTTACATCGATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAGGATTTTGAAATCCTTATCCGCGTACTTCTGCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCGTTCTTGTAGTCCTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATTGATTTGGATACGAGAACGCACAATACTGAAATCGCCCGAGCGTATTACGTCCGATTGTGGCTAGCGTACGGAAAGTTGTGAAATTCGACATTAAAACAAAACGG]
[-] EMBL BM575298 [CTCCCCCTAGCCCAGCAGCTTATCAATGTCCTTCACAATGCTGCTGGGCGACGTTGTAGGCGCATAGCGATCCACCGGCTGACCGTCCTTGTTTACCAAAAACTTGGCAAAGTTCCACTTGATCGAATCACCCAAAGTGCCACCCTGCTTGTGCTTGAGATATTTGTAGAGCGGATGTGCGCCGTCACCGTTTACATCGATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAGGATTTTGAAATCCTTATCCGCGTACTTCTGCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCGTTCTTGTAGTCCTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATTGATTTGGATACGAGAACGCACAATACTGAAATCGCCCGAGCGTATTACGTCCGATTGTGGCTAGCGTACGGAAAGTTGTGAAATTCGACATTAAAACAAAACGG]
consensusID : consensus_9253#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 664 fasta sequence
[GTCCGTCCTTGTTTACCAGGAACTTGGAGAAATTCCATTTNATTGAATCACCCAGAATTCCACCCTGCTTGTGCTTCAAATATTTGTACAACGGATCCGCATCGTCTCCGTTCACCTTAATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAAAATTTTGAAATCCTTATCCGCGTACTTCTGCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCATTCTTGTAGTCTTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTACTATAAATGAACCACGGGCAAAGAAGAAATATGGACTGCGTGAATGGAGGGGCAATCGGACCATAAGCGATATGCTCTTATCTGCAAATATTGAATGATGGGAAAACGTGCACAATTGCTCTAGCTTCACACGCGCGGCGCGCCGGTAACGCAGCACCAACTATCGTGACCACAAACCGG]
[-] EMBL BX624269 [GTCCGTCCTTGTTTACCAGGAACTTGGAGAAATTCCATTTNATTGAATCACCCAGAATTCCACCCTGCTTGTGCTTCAAATATTTGTACAACGGATCCGCATCGTCTCCGTTCACCTTAATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAAAATTTTGAAATCCTTATCCGCGTACTTCTGCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCATTCTTGTAGTCTTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTACTATAAATGAACCA ]
[-] EMBL BM627367 [ TTGTGCTTGAGATATTTGTAGAGCGGATGTGCGCCGTCACCGTTTACATCGATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAGGATTTTGAAATCCTTATCCGCGTACTTCTGCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCGTTCTTGTAGTCCTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTACTATTAATGAACCACGGGCAAAGAAGAAATATGGACTGCGTGAATGGAGGGGCAATCGGACCATAAGCGATATGCTCTTATCTGCAAATATTGAATGATGGGAAAACGTGCACAATTGCTCTAGCTTCACACGCGCGGCGCGCCGG ]
[-] EMBL BM609090 [ AAGCGATATGCTCTTATCTGTAAATATTGAATGATGGGAAAACGTGCACAATTGCTCTAGCTCCACACGCGCGGCGCGCGGATAACGCAGCACCAACTATCGTGACCACAAACCGG]
consensusID : consensus_9253#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 211 fasta sequence
[AAGCGGATCCGTAGTACAAATACACGAAGCACAAGCAGGGGGGAATACCGGGTGATCCAACAAAAAGGAATAGCACCAAGTACCCGGTAAACAAGGACGGACAGCCGGGGGACCGCTACGCACCGACCACGTCGCCCAAGAGTAACGCAAAGGATACCGAAAAGCTGCCGGAAGCGTAGAGATGCAAACAGGAAAAGGGCAAACGAACCAA]
[+] EMBL BX613271 [AAGCGGATCCGTAGTACAAATACACGAAGCACAAGCAGGGGGGAATACCGGGTGATCCAACAAAAAGGAATAGCACCAAGTACCCGGTAAACAAGGACGGACAGCCGGGGGACCGCTACGCACCGACCACGTCGCCCAAGAGTAACGCAAAGGATACCGAAAAGCTGCCGGAAGCGTAGAGATGCAAACAGGAAAAGGGCAAACGAACCAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9253#0 CGCTCGCGCACATGTGGCCTTTTTTTTATTTTTTTTTCCAACAGTTTTAAACACGATTTT 60
consensus_9253#2 ------------------------------------------------------------
consensus_9253#1 ------------------------------------------------------------
consensus_9253#3 ------------------------------------------------------------
consensus_9253#4 ------------------------------------------------------------
consensus_9253#5 ------------------------------------------------------------
consensus_9253#0 ATTGATTCTCTCAATTCATGATTCATAAACAAGCAAATTCAATCAAGCAAGTGCATTTGC 120
consensus_9253#2 ---------CTCAATTCATGATTCATAAACAAGCAAATTCAATCAAGCAAGTGCATTTGC 51
consensus_9253#1 ------------------------------------------------------------
consensus_9253#3 ------------------------------------------------------------
consensus_9253#4 ------------------------------------------------------------
consensus_9253#5 ------------------------------------------------------------
consensus_9253#0 GACCTTAACAACTACCATTACTGTCCCCTGACTGAGCCCCCTTGCCAAACTGCAATACTT 180
consensus_9253#2 GACCTTAACAACTACCATTACTGTCCCCTGACTGAGCCCCCTTGCCAAACTGCAATACTT 111
consensus_9253#1 ------------------------------------------------------------
consensus_9253#3 ------------------------------------------------------------
consensus_9253#4 ------------------------------------------------------------
consensus_9253#5 ------------------------------------------------------------
consensus_9253#0 TTTCGGCTTCCTGTTTGCTCCCCCTAGCCCAGCA-GCTTATCAATGTCCTTCACAATGCT 239
consensus_9253#2 TTTCGGCTTCCTGTTTGCTCCCCCTAGCCCAGCA-GCTTATCAATGTCCTTCACAATGCT 170
consensus_9253#1 ------CTGTTTAACATCTCTACGGTTTCCAGCAAGCTTATCGATGTCCTTAACGATACT 54
consensus_9253#3 -----------------CTCCCCCTAGCCCAGCA-GCTTATCAATGTCCTTCACAATGCT 42
consensus_9253#4 ------------------------------------------------------------
consensus_9253#5 ------------------------------------------------------------
consensus_9253#0 GCTGGGCGA-CGTTGTAGGCGCATAGCGATCCACCGGCTGACCGTCCTTGTTTACCAAAA 298
consensus_9253#2 GCTGGGCGA-CGTTGTAGGCGCATAGCGATCCACCGGCTGACCGTCCTTGTTTACCAAAA 229
consensus_9253#1 CTTAGGCGAACGTGGTCGGTGCGTAGCGGTCCACCGGCTGTCCGTCCTTGTTTACCAGGA 114
consensus_9253#3 GCTGGGCGA-CGTTGTAGGCGCATAGCGATCCACCGGCTGACCGTCCTTGTTTACCAAAA 101
consensus_9253#4 ---------------------------------------GTCCGTCCTTGTTTACCAGGA 21
consensus_9253#5 ------------------------------------------------------------
consensus_9253#0 ACTTGGCAAAGTTCCACTTGATCGAATCACCCAAAGTGCCACCCTGCTTGTGCTTGAGAT 358
consensus_9253#2 ACTTGGCAAAGTTCCACTTGATCGAATCACCCAAAGTGCCACCCTGCTTGTGCTTGAGAT 289
consensus_9253#1 ACTTGGAGAAATTCCATTTAATTGAATCACCCAGAATTCCACCCTGCTTGTGCTTCAAAT 174
consensus_9253#3 ACTTGGCAAAGTTCCACTTGATCGAATCACCCAAAGTGCCACCCTGCTTGTGCTTGAGAT 161
consensus_9253#4 ACTTGGAGAAATTCCATTTNATTGAATCACCCAGAATTCCACCCTGCTTGTGCTTCAAAT 81
consensus_9253#5 ------------------------------------------------------------
consensus_9253#0 ATTTGTAGAGCGGATGTGCGCCGTCACCGTTTACATCGATCTTAGCGAAAACGTCTCCTA 418
consensus_9253#2 ATTTGTAGAGCGGATGTGCGCCGTCACCGTTTACATCGATCTTAGCGAAAACGTCTCCTA 349
consensus_9253#1 ATTTGTACAACGGATCCGCATCGTCTCCGTTCACCTTAATCTTAGCGAAAACGTCTCCTA 234
consensus_9253#3 ATTTGTAGAGCGGATGTGCGCCGTCACCGTTTACATCGATCTTAGCGAAAACGTCTCCTA 221
consensus_9253#4 ATTTGTACAACGGATCCGCATCGTCTCCGTTCACCTTAATCTTAGCGAAAACGTCTCCTA 141
consensus_9253#5 ------------------------------------------------------------
consensus_9253#0 CTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTT 478
consensus_9253#2 CTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTT 409
consensus_9253#1 CTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTT 294
consensus_9253#3 CTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTT 281
consensus_9253#4 CTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTT 201
consensus_9253#5 ------------------------------------------------------------
consensus_9253#0 GGCCACCGAACTGATTGCAGGGGAAGGACAAAATTTTGAAATCCTTATCCGCGTACTTCT 538
consensus_9253#2 GGCCACCGAACTGATTGCAGGGGAAGGACAAAATTTTGAAATCCTTATCCGCGTACTTCT 469
consensus_9253#1 GGCCACCGAACTGATTGCAGGGGAAGGACAGGATTTTGAAATCCTTATCCGCGTACTTCT 354
consensus_9253#3 GGCCACCGAACTGATTGCAGGGGAAGGACAGGATTTTGAAATCCTTATCCGCGTACTTCT 341
consensus_9253#4 GGCCACCGAACTGATTGCAGGGGAAGGACAAAATTTTGAAATCCTTATCCGCGTACTTCT 261
consensus_9253#5 --------------------------------------------------AAGCGGATCC 10
* **
consensus_9253#0 GCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGT 598
consensus_9253#2 GCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGT 529
consensus_9253#1 GCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGT 414
consensus_9253#3 GCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGT 401
consensus_9253#4 GCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGT 321
consensus_9253#5 GTAGTA--CAAATACACGAAGCACAAGCA-----GGGGGGAATACCGGGTGATCCAACAA 63
* ** * * *** ** ** * * * ** ***
consensus_9253#0 TGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAAT 658
consensus_9253#2 TGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAAT 589
consensus_9253#1 TGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAAT 474
consensus_9253#3 TGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAAT 461
consensus_9253#4 TGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAAT 381
consensus_9253#5 AAAGGAATAGCACCAAGTACCCGGTAAACAAGGACGGACAGCCGGGGGACCGCTACGCAC 123
* ** ***** ** * ** ** * * * * ** ** ** * ** *
consensus_9253#0 CCTTCACCGTGAAGTCGTACACCGATTTAGCATTCTTGTAGTCTTCCATCGTGCCGTCGG 718
consensus_9253#2 CCTTCACCGTGAAGTCGTACACCGATTTAGCATTCTTGTAGTCTTCCATCGTGCCGTCGG 649
consensus_9253#1 CCTTCACCGTGAAGTCGTACACCGATTTAGCGTTCTTGTAGTCCTCCATCGTGCCGTCGG 534
consensus_9253#3 CCTTCACCGTGAAGTCGTACACCGATTTAGCGTTCTTGTAGTCCTCCATCGTGCCGTCGG 521
consensus_9253#4 CCTTCACCGTGAAGTCGTACACCGATTTAGCATTCTTGTAGTCTTCCATCGTGCCGTCGG 441
consensus_9253#5 CGACCACGTCGCCCAAGAGTAACG-CAAAGGATACCGAAAAGCTGCCG--GAAGCGTAGA 180
* *** * * * ** ** * * * * ** * *** *
consensus_9253#0 TTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATTG--ATTTGGATATGA 776
consensus_9253#2 TTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTAT---------GCTATTA 700
consensus_9253#1 TTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATTG--ATTTGGATACGA 592
consensus_9253#3 TTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATTG--ATTTGGATACGA 579
consensus_9253#4 TTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTACTATAAATGAACCACGG 501
consensus_9253#5 GATGCAA-ACAGGAAAAGGGCAAACGAACCAA---------------------------- 211
*** * * * * * ***** *
consensus_9253#0 GAACGCACAATACTGAAATCGCCCGAGCGTATTAC--GTCCGATTGTGGCTAGCGTACGG 834
consensus_9253#2 ATACACCCACTACGAA---CAGAAGGACACTTTTC--GTC-GAAAACAT----------- 743
consensus_9253#1 GAACGCACAATACTGAAATCGCCCGAGCGTATTAC--GTCCGATTGTGGCTAGCGCGGGG 650
consensus_9253#3 GAACGCACAATACTGAAATCGCCCGAGCGTATTAC--GTCCGATTGTGGCTAGCGTACGG 637
consensus_9253#4 GCAAAGAAGAAATATGGACTGCGTGAATGGAGGGGCAATCGGACCATAAGCGATATGCTC 561
consensus_9253#5 ------------------------------------------------------------
consensus_9253#0 AAAGTTGTAAAATTC--CAGTAGGCCAACAGTGCTCGAGGAATTCCGCAGCCTTT----- 887
consensus_9253#2 ------------------------------------------------------------
consensus_9253#1 AAAGTTGTGAAATTCGACATTAAAACAAAATGGATTGTTTATGTTCGCCGTTCGACGCCG 710
consensus_9253#3 AAAGTTGTGAAATTCGACATTAAAACAAAACGG--------------------------- 670
consensus_9253#4 TTATCTGCAAATATTGA-ATGATGGGAAAACGTGCACAATTGCTCTAGCTTCACACGCGC 620
consensus_9253#5 ------------------------------------------------------------
consensus_9253#0 ------------------------------------------------------------
consensus_9253#2 ------------------------------------------------------------
consensus_9253#1 GGCAGTTTTCACTGTTTACTCGAAAGACCGGTCACTCCAGTTCGCGTTCTGCGTGCGTGT 770
consensus_9253#3 ------------------------------------------------------------
consensus_9253#4 GGCGCGCCGGTAACGCAGCACCAACTATCGTGACCACAAACCGG---------------- 664
consensus_9253#5 ------------------------------------------------------------
consensus_9253#0 ----------
consensus_9253#2 ----------
consensus_9253#1 GTGTGTACGG 780
consensus_9253#3 ----------
consensus_9253#4 ----------
consensus_9253#5 ----------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||