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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9261#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1865 fasta sequence
[CCCCGNGGTTCAATTGCGCTTTATTTTTGACACAATTTCGGTAGGTCCGGTATCGCAGTCAGTGGGTTTTTAACTTACGCCTCAAAACACACGAAACGGTCGAACGGGGGGGTCGCGCCTCCTTTTCTCATTGTGACATAGGGAAAGGGGCGAAGATTTGCATGAGGGCACCAGGGTTTACTACAGGGCCTACTACTGAGAGAGATGAGATCAAGATTAGATCTTCGTCTTCGCCTAGGTTTCGTCCCGCAGCAGATATACCTCTGTGTGTATCTGGTAGCCTGTTTGTGTGTGTATGTATGTGTGTATGTAACTCTTTTCGTACAG--GGC--TTTTGGGTAGGCACATTTTATGATGAACGCATTAAAATTCAATGTATCGCTCTACGCACTCAATGCACTCAATGGGGGAACCAGCAGCAAAACATAATGCAGTGGGCTGGATCACTGTTTAGTAAACCTTTATCTGCACACTATAACTGTTACTATTGCAAATTCTGTGGTTTCCGTCTCCCTCTATTTCTCCTTTTAAAAGGGTTTATTTTCACGTTAATTTCCCACTTGTTCTTTT-CCTGTAAATCTAA-AGTAAAGGTTTTGACTATCTAAAGTGCGAGGTTGTACAGAAGAAGCAGAAGAAGAANACGAAGACACGCAAAAAACCCCGCGTTGATACTAATGCTAACATGATATTGATGATATGATGGAAGAGAGCGTGAGGGGGTGAGATAGAGAAATGATTGTGTTTTCCTTCCGCTATTAATTTTTATAACCTTCCATACAAGAAAAAAAGAGAAAAATCCAGCCGCAAATAGGAAAACAGTTGAACGACGCGAGGGAGAATGTGTTTTCATGAAACAAAACAAAAAAAAAGAAGCAGAGATATACTCGATAAAAAAGAAGCCGTACTAATATGTATACATTAGTTGATTAGTTAGGACGCAAAACCGATTAAAAATTGAGAAGCGAGGCGATATCTTTAAGATCCTCTCTACCATCCCCCCGCCCCCGACACACAAACACACACACGGTTCTAAGCCAAAACATGCAACAATTGGTGCGGTTGCAGTATGAAACATTTAAAGCAGAAACTGCTTCCATAAGTACAGTGTTCCCAGCAGACTGTGTGAACTGTTAAACAAAAAAGAAGAAAAAAGCTAACCGTTTAAAAAACAAAAGTATGGCACAGAACGGCGGATTGGGTAAAGCAGCATTAATATATACATGAATGAGC-AAAAAAAAAAAAAGGGAAAGCAAAGCAGAAATAGCACCATATATATTAGCAATATAAACCATACATTATATATAAACCACATGAGAAAACAAGAAACAACGTGTTTGATGAATATAGACTAAAACAAAGGAAGAGGAGGATGGTGCTGCTCCTCGCAGGAAACATGCAACAGTGCAACCTGGTTCTTCCCGTAAGCCTCTGTGGCCCAGAATCTAGGGGCGCAGTTCAAAAAAGAGCAAGAAGACACAGTTTCAGGTACGATGCATGAAAAAGCATGAACTTATAAAAATATGAATCGTACCTCTTACCAAGAGCCACATTAAAACAGTGTAAAATGGGGATGTGCGCAAACAACAACAATAGGGGAATTATTACTCTTCAGTTAATATAACTTTTTTTTGTTGAATATTTACAATATCAAAACGCGCATTGTGCTTTCGCTGATCGTGTGTCGTTGGACGCTAAGCATTAGCGCGCAGCCTCCTCTTCCGTCAAACAAAGAGGTCAAACATCTGCCCTCCCCCCCGGAACACATTAGTTAGTACCGCAGCCAGAAGAATGTAACAAACAAATAGACAAACAAATATTGAGCTGAAGGGCAAACAAAAAATAAACAGCTGGATAAGCATTAGGAAGA]
[+] EMBL AL694479 [CCCCGNGGTTCAATTGCGCTTTATTTTTGACACAATTTCGGTAGGTCCGGTATCGCAGTCAGTGGGTTTTTAACTTACGCCTCAAAACACACGAAACGGTCGAACGGGGGGGTCGCGCCTCCTTTTCTCATTGTGACATAGGGAAAGGGGCGAAGATTTGCATGAGGGCACCAGGGTTTACTACAGGGCCTACTACTGAGAGAGATGAGATCAAGATTAGATCTTCGTCTTCGCCTAGGTTTCGTCCCGCAGCAGATATACCTCTGTGTGTATCTGGTAGCCTGTTTGTGTGTGTATGTATGTGTGTATGTAACTCTTTTCGTACAGTTGGC TTTTGGGTAGGCACATTTTATGATGAACGCATTAAAATTCAATGTATCGCTCTACGCACTCAATGCACTCAATGGGGGAACCAGCAGCAAAACATAATGCAGTGGGCTGGATCACTGTTTAGTAAACCTTTATCTGCACACTATAACTGTTACTATTGCAAATTCTGTGGTTTCCGTCTCCCTCTATTTCTCCTTTTAAAAGGGTTTATTTTCACGTTAATTTCCCACTTGTTCTTTTACCTGTAAATCTAACAGTAAAGGTTTTGACTATCTAAAGTGCGAGGTTGTACAGAAGAAGCAGAAGAAGAANACGAAGACAC ]
[+] EMBL BM638195 [ ccG GGCTTTTTTGGGTAGGCACATTTTATGATGAACGCATTAAAATTCAATGTATCGCTCTACGCACTCAATGCACTCAATGGGGGAACCAGCAGCAAAACATAATGCAGTGGGCTGGATCACTGTTTAGTAAACCTTTATCTGCACACTATAACTGTTACTATTGCAAATTCTGTGGTTTCCGTCTCCCTCTATTTCTCCTTTTAAAAGGGTTTATTTTCACGTTAATTTCCCACTTGTTCTTTT CCTGTAAATCTAA AGTAAAGGTTTTGACTATCTAAAGTGCGAGGTTGTACAGAAGAAGCAGAAGAAGAAGAAGAAGACACGCAAAAAACCCCGCGTTGATACTAATGCTAACATGATATTGATGATATGATGGAAGAGAGCGTGAGGGGGTGAGATAGAGAAATGATTGTGTTTTCCTTCCGCTATTAATTTTTATAACCTTCCATACAAGAAAAAAAGAGAAAAATCCAGCCGCAAATAGGAAAACAGTTGAACGACGCGAGGGAGAATGTGTTTTCATGAAACAAAACAAAAAAAAAGAAGCAGAGATATACTCGATAAAAAAGAAGCCGTACTAATATGTATACATTAGTTGATTAGTTAGGACGCAAAACCGATTAAAAATTGAGAAGCGAGGCGATATCTTTAAGATCCTCTCTACCATCCCCCCGCCCCCGACAC ]
[+] EMBL CNS098XT [ tcAAGCAGAGATATACTCGATAAAAAAGAAGCCGTACTAATATGTATACATTAGTTGATTAGTTAGGACGCAAAACCGATTAAAAATTGAGAAGCGAGGCGATATCTTTAAGATCCTCTCTACCATCCCCCCGCCCCCGACACACAAACACACACACGGTTCTAAGCCAAAACATGCAACAATTGGTGCGGTTGCAGTATGAAACATTTAAAGCAGAAACTGCTTCCATAAGTACAGTGTTCCCAGCAGACTGTGTGAACTGTTAAACAAAAAAGAAGAAAAAAGCTAACCGTTTAAAAAACAAAAGTATGGCACAGAACGGCGGATTGGGTAAAGCAGCATTAATATATACATGAATGAGC AAAAAAAAAAAAAGGGAAAGCAAAGCAGAAATAGCACCATATATATTAGCAATATAAACCATACATTATATATAAACCACATGAGAAAACAAGAAACAACGTGTTTGATGAATATAGACTAAAACAAAGGAAGAGGAGGATGGTGCTGCTCCTCGCAGGAAACATGCAACAGTGCAACCTGGTTCTTCCCGTAAGCCTCTGTGGCCCAGAATCTAGGGGCGCAGTTCAAAAAAGAGCAAGAAGACACAGTTTCAGGTACGATGCATGAAAAAGCATGAACTTATAAAAATATGAATCGTACCTCTTACCAAGAGCCACATTAAAACAGTGTAAAATGGGGATGTGCGCAAACAACAACAATAGGGGAATTATTACTCTTCAGTTAATATAACTTTTTTTTGTTGAATATTTACAATATCAAAACGCGCATTGTGCTTTCGCTGATCGTGTGTCGTTGGACGCTAAGCATTAGCGTGCAGCCTCCTCTTCCGTCAAACAAAGAGGTCAAACATCTGCCCTCCCCCCCGGAACACATTAGTTAG ]
[+] EMBL CNS09H61 [ ATATACTCGATAAAAAAGAAGCCGTACTAATATGTATACATTAGTTGATTAGTTAGGACGCAAAACCGATTAAAAATTGAGAAGCGAGGCGATATCTTTAAGATCCTCTCTACCATCCCCCCGCCCCCGACACACAAACACACACACGGTTCTAAGCCAAAACATGCAACAATTGGTGCGGTTGCAGTATGAAACATTTAAAGCAGAAACTGCTTCCATAAGTACAGTGTTCCCAGCAGACTGTGTGAACTGTTAAACAAAAAAGAAGAAAAAAGCTAACCGTTTAAAAAACAAAAGTATGGCACAGAACGGCGGATTGGGTAAAGCAGCATTAATATATACATGAATGAGC AAAAAAAAAAAAAGGGAAAGCAAAACAGAAATAGCACCATATATATTAGCAATATAAACCATACATTATATATAAACCACATGAGAAAACAAGAAACAACGTGTTTGATGAATATAGACTAAAACAAAGGAAGAGGAGGATGGTGCTGCTCCTCGCAGGAAACATGCAACAGTGCAACCTGGTTCTTCCCGTAAGCCTCTGTGGCCCAGAATCTAGGGGCGCAGTTCAAAAAAGAGCAAGAAGACACAGTTTCAGGTACGATGCATGAAAAAGCATGAACTTATAAAAATATGA ]
[+] EMBL CNS09A2U [ ATACTCGATAAAAAAGAAGCCGTACTAATATGTATACATTAGTTGATTAGTTAGGACGCAAAACCGATTAAAAATTGAGAAGCGAGGCGATATCTTTAAGATCCTCTCTACCATCCCCCCGCCCCCGACACACAAACACACACACGGTTCTAAGCCAAAACATGCAACAATTGGTGCGGTTGCAGTATGAAACATTTAAAGCAGAAACTGCTTCCATAAGTACAGTGTTCCCAGCAGACTGTGTGAACTGTTAAACAAAAAAGAAGAAAAAAGCTAACCGTTTAAAAAACAAAAGTATGGCACAGAACGGCGGATTGGGTAAAGCAGCATTAATATATACATGAATGAGC AAAAAAAAAAAAAGGGAAAGCAAAGCAGAAATAGCACCATATATATTAGCAATATAAACCATACATTATATATAAACCACATGAGAAAACAAGAAACAACGTGTTTGATGAATATAGACTAAAACAAAGGAAGAGGAGGATGGTGCTGCTCCTCGCAGGA ]
[-] EMBL CNS098XU [ GGCGATATCTTTAAGATCCTTTCTACCATCCCCCCCCCCCCGACACACAAAAAAACACACGGTTCTAAGCCAAAACATGCAACAATTGGTGCGGTTGCAGTATGAAACATTTAAAGCAGAAACTGCTTCCATAAGTACAGTGTTCCCAGCAGACTGTGTGAACTGTTAAACAAAAAAGAAGAAAAAAGCTAACCGTTTAAAAAACAAAAGTATGGCACAGAACGGCGGATTGGGTAAAGCAGCATTAATATATACATGAATGAGC AAAAAAAAAAAAAGGGAAAGCAAAGCAGAAATAGCACCATATATATTAGCAATATAAACCATACATTATATATAAACCACATGAGAAAACAAGAAACAACGTGTTTGATGAATATAGACTAAAACAAAGGAAGAGGAGGATGGTGCTGCTCCTCGCAGGAAACATGCAACAGTGCAACCTGGTTCTTCCCGTAAGCCTCTGTGGCCCAGAATCTAGGGGCGCAGTTCAAAAAAGAGCAAGAAGACACAGTTTCAGGTACGATGCATGAAAAAGCATGAACTTATAAAAATATGAATCGTACCTCTTACCAAGAGCCACATTAAAACAGTGTAAAATGGGGATGTGCGCAAACAACAACAATAGGGGAATTATTACTCTTCAGTTAATATAACTTTTTTTTGTTGAATATTTACAATATCAAAACGCGCATTGTGCTTTCGCTGATCGTGTGTCGTTGGACGCTAAGCATTAGCGTGCAGCCTCCTCTTCCGTCAAACAAAGAGGTCAAACATCTGCCCTCCCCCCCGGAACACATTAGTTAGTACC ]
[-] EMBL CNS09A2V [ AAAGAAGAAAAAAGCTAACCGTTTAAAAAACAAAAGTATGGCACAGAACGGCGGATTGGGTAAAGCAGCATTAATATATACATGAATGAGC AAAAAAAAAAAAAGGGAAAGCAAAGCAGAAATAGCACCATATATATTAGCAATATAAACCATACATTATATATAAACCACATGAGAAAACAAGAAACAACGTGTTTGATGAATATAGACTAAAACAAAGGAAGAGGAGGATGGTGCTGCTCCTCGCAGGAAACATGCAACAGTGCAACCTGGTTCTTCCCGTAAGCCTCTGTGGCCCAGAATCTAGGGGCGCAGTTCAAAAAAGAGCAAGAAGACACAGTTTCAGGTACGATGCATGAAAAAGCATGAACTTATAAAAATATGAATCGTACCTCTTACCAAGAGCCACATTAAAACAGTGTAAAATGGGGATGTGCGCAAACAACAACAATAGGGGAATTATTACTCTTCAGTTAATATAACTTTTTTTTGTTGAATATTTACAATATCAAAACGCGCATTGTG TTTCGCTGATCGTGTGTCGTTGGACGCTAAGCATTAGCGCGCAGCCTCCTCTTCCGTCAAACAAAGAGGTCAAACATCTGCCCTCCCCCCCGGAACACATTAGTTAGTACCGCAGCCAGAAGAATGTAACAAACAAATAGACAAATAAA ]
[-] EMBL CNS09H62 [ CACAGAACGGCGGATTGGGTAAAGCAGCATTAATATATACATGAATGAGCAAAAAAAAAAAAAAGGGAAAGCAAAGCAGAAATAGCACCATATATATTAGCAATATAAACCATACATTATATATAAACCACATGAGAAAACAAGAAACAACGTGTTTGATGAATATAGACTAAAACAAAGGAAGAGGAGGATGGTGCTGCTCCTCGCAGGAAACATGCAACAGTGCAACCTGGTTCTTCCCGTAAGCCTCTGTGGCCCTGAATCTAGGGGCGCAGTTCAAAAAAGAGCAAGAAGACACAGTTTCAGGTACGATGCATGAAAAAGCATGAACTTATAAAAATATGAATCGTACCTCTTACCAAGAGCCACATTAAAACAGTGTAAAATGGGGATGTGCGCAAACAACAACAATAGGGGAATTATTACTCTTCAGTTAATATAACTTTTTTTTGTTGAATATTTACAATATCAAAACGCGCATTGTGCTTTCGCTGATCGTGTGTCGTTGGACGCTAAGCATTAGCGCGCAGCCTCCTCTTCCGTCAAACAAAGAGGTCAAACATCTGCCCTCCCCCCCGGAACACATTAGTTAGTACCGCAGCCAGAAGAATGTAACAAACAAATAGACAAACAA ]
[+] EMBL AGA280702 [ TTTTTGTTGAATATTTACAATATCAAAACGCGCATTGTGCTTTCGCTGATCGTGTGTCGTTGGACGCTAAGCATTAGCGCGCAGCCTCCTCTTCCGTCAAACAAAGAGGTCAAACATCTGCCCTCCCCCCCGGAACACATTAGTTAGTACCGCAGCCAGAAGAATGTAACATACAAATAGACAAACAAATATTGAGCTGAAGGGCAAACAAAAAATAAACAGCTGGATAAGCATTAGGAAGA]
consensusID : consensus_9261#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1156 fasta sequence
[CCGGCGGCGGCGGTGGCGGTGGTGGCGGAAGTGCACAGAAGAACAAGCGCATGGTCGATGAGGATGGGTTTATGCTGCCGGCCAACTCGCGCAACAATGCCTGGACCATGCTATCGATCGATCCGAAGAAGATAAACATTTCGGCACCTAAACCGCAGACTGGTGAAACGCGCCTCGGATCGGCCTCCATGTTCCAGGGCTGGGGTGGAAAAACAAACAACGTGTTCGCGTCCCTCAACATTGACGAGTCGGCTGCCCAACCGCCAAGCTTCTTCGGTGCGTCCGGTCCGATGGGTGGTGGCAGTAGTGGTGGTGGTGGTGGTGGAAGTGGCGGAAGTGGCGGCAGCGGTGGTGGTGGACGAGGAGGTGGTGGTGGTGGAGGTGGTTCCAAGGGTTCGCAATCCCACAAAAAGGGTGGCGGCGGCGGCGGTGGCAACAACTCTAAAACGCCCCATTACCTCGGCCGAACCAGCAGCCACTTGTGATAGGGCAATCATCAGCAGCAATGATCGATCGACACCGAACAGCAGCACTAACCCCCCGGCCATCATCATCCACGTGCAATGAGGTAACAGTGGAGAGAGAGAGAGAGA-AATGGGAGAGAAACACACAGCAGCCAAGGAGTGCGGCTGCAAAATTGTGAAGCGCTGGCGCAGAAATGATCGAGAAAATCACGAGAAGAAGCTAAATTTGCTGCGAAAGATGAGGGTAGATGATGGAGGTGCGCGAGTGGGGCTGCTCTGTTTTGTTTACGCTACTACCACATCCCAATTGCGCTTTATTTTTGACACAATTTCGGTAGGTCCGGTATCGCAGTCAGTTGGTTTTTAACTTACGCCTCAAAACACACGAAACGGTCGAACGGGGGGGTCGCGCCTCCTTTTCTCATTGTGACATAGGGAAAGGGGCGAAGATTTGCATGAGGGCACCAGGGTTTACTACAGGGCCTACTACTGAGAGAGATGAGATCAAGATTAGATCTTCGTCTTCGCCTAGGTTTCGTCCCGCAGCAGATATACCTCTGTGTGTATCTGGTAGCCTGTTTGTGTGTGTATGTATGTGTGTATGTAACTCTTTTCGTACAGTTGGCTTTTTTGGGTAGGCACATTTTATGATGAACGCATTAAAATTCAATGTATCGCTCTACGCACTCNAT]
[+] EMBL BM639459 [CCGGCGGCGGCGGTGGCGGTGGTGGCGGAAGTGCACAGAAGAACAAGCGCATGGTCGATGAGGATGGGTTTATGCTGCCGGCCAACTCGCGCAACAATGCCTGGACCATGCTATCGATCGATCCGAAGAAGATAAACATTTCGGCACCTAAACCGCAGACTGGTGAAACGCGCCTCGGATCGGCCTCCATGTTCCAGGGCTGGGGTGGAAAAACAAACAACGTGTTCGCGTCCCTCAACATTGACGAGTCGGCTGCCCAACCGCCAAGCTTCTTCGGTGCGTCCGGTCCGATGGGTGGTGGCAGTAGTGGTGGTGGTGGTGGTGGAAGTGGCGGAAGTGGCGGCAGCGGTGGTGGTGGACGAGGAGGTGGTGGTGGTGGAGGTGGTTCCAAGGGTTCGCAATCCCACAAAAAGGGTGGCGGCGGCGGCGGTGGCAACAACTCTAAAACGCCCCATTACCTCGGCCGAACCAGCAGCCACTTGTGATAGGGCAACCATCAGCAGCAATGATCGATCGACACCGAACAGCAGCACTAACCCTCCGGCCATCATCATCCACGTGCAATGAGGTAACAGTGGAGAGAGAGAGAGAGATAATGGGTGAGAAACACACAGCAGCCAAGGAGTGCGGCTGCTAAATTGTGAAGCGCTGGCGC ]
[+] EMBL BM578837 [ ccgCGGCCAACTCGCGCAACAATGCCTGGACCATGCTATCGATCGATCCGAAGAAGATAAACATTTCGGCACCTAAACCGCAGACTGGTGAAACGCGCCTCGGATCGGCCTCCATGTTCCAGGGCTGGGGTGGAAAAACAAACAACGTGTTCGCGTCCCTCAACATTGACGAGTCGGCTGCCCAACCGCCAAGCTTCTTCGGTGCGTCCGGTCCGATGGGTGGTGGCAGTAGTGGTGGTGGTGGTGGTGGAAGTGGCG ]
[+] EMBL BM603805 [ ccgggaggtGGTTCGCAATCCCACAAAAAGGGTGGCGGCGGCGGCGGTGGCAACAACTCTAAAACGCCCCATTACCTCGGCCGAACCAGCAGCCACTTGTGATAGGGCAATCATCAGCAGCAATGATCGATCGACACCGAACAGCAGCACTAACCCCCCGGCCATCATCATCCACGTGCAATGAGGTAACAGTGGAGAGAGAGAGAGAG AATGGGAGAGAAACACACAGCAGCCAAGGAGTGAGGCTGCAAAATTGTGAAGCGCTGGCGCAGAAATGATCGAGAAAATCACGAGAAGAAGCTAAATTTGCTGCGAAAGATGAGGGTAGATGATGGAGGTGCGCGAGTGGGGCTGCTCTGTTTTGTTTACGCTACTACCACATCCCAATTGCGCTTTATTTTTGACACAATTTCGGTAGGTCCGGTATCGCAGTCAGTTGGTTTTTAACTTACGCCTCAAAACACACGAAACGGTCGAACGGGGGGGTCGCGCCTCCTTTTCTCATTGTGACATAGGGAAAGGGGCGAAGATTTGCATGAGGGCACCAGGGTTTACTACAGGGCCTACTACTGAGAGAGATGAGATCAAGATTAGATCTTCGTCTTCGCCTAGGT ]
[+] EMBL BX628664 [ ACCAGCAGCCACTTGTGATAGGGCAATCATCAGCAGCAATGATCGATCGACACCGAACAGCAGCACTAACCCCCCGGCCATCATCATCCACGTGCAATGAGGTAACAGTGGAGAGAGAGAGAGAGAGAATGGGAGAGAAACACACAGCAGCCAAGGAGTGCGGCTGCAAAATTGTGAAGCGCTGGCGCAGAAATGATCGAGAAAATCACGAGGAGAAGCTAAATTTGCTGCGAAAGATGAGGGTAGATGATGGAGGTGCACGAGTGGGGCTGCTCTGTTTTGTTTACGCTACTACCACATCCCAATTGCGCTTTATTTTTGACACAATTTCGGTAGGTCCGGTATCGCAGTCAGTGGGTTTTTAACTTACGCCTCAAAACACACGAAACGGTCGAACGGGGGGGTCGCGCCTCCTTTTCTCATTGTGACATAGGGAAAGGGGCGAAGATTTGCATGAGGGCACCAGGGTTTACTACAGGGCCTACTACTGAGAGAGATGAGATCAAGATTAGATCTTCGTCTTCGCCTAGGTTTCGTCCCGCAGCAGATATACCTCTGTGTGTATCTGGTAGCCTGTTTGTGTGTGTATGTATGTGTGTATGTAACTCTTTTCGTACAGTTGGCTTTTTTGGGTAGGCACATTTTATGATGAACGCATTAAAATTCAATGTATCGCTCTACGCACTCNAT]
consensusID : consensus_9261#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 676 fasta sequence
[CCGTTCCCACTTGTTCTTTTCCTGTAAATCTAAAGTAAAGGTTTTGACTATCTAAAGTGCGAGGTTGTACAGAAGAAGCAGAAGAAGATTTACATTGAATAAAAGTAAGAGCCGACTTCGGTCGGTATATATTGTTGCAAAAGGGGATTTGCAAAAGGGGACGAAACAGAGGGAGCTGGAAGATCTTGTCTTAACTTGTACCAAACATTAATCGGAAGAAGTTCATGTGTATGGCCACTAATATTAATATTTATGCAGTGAGTTATAGTTGCTTGTGTATGAAAGTATGAACAAGTATCAAACCAAACTTGTAGCCGGGACAGGCACTGGTGCAGCGGTGTTGACGGAACAAGTCGATCCCTTAGGCAAAAATACACAAGATGAAAGGAAGAAACCGACAGCAGTCGGAAGTATTACCCGTGAAGTCGCATCGAACAGCAACGATAATGGGCAGTATACGGATGCAATGAAATTAGACCCATCCCGCATAGAGATTGAAAGCGTTTTAGCGAATGCTATTAAAATAGAAAACTTTACAGAAGAGGACAGTGTCTTCAATGAAGAAAGCATCCCGCTTGATACAATACGGTTACCAAAGAGAAAATATTTCGGGGATAAAGAGTTGGAAGACGATTCCAGTATTACATCAAAATCGCAAGACTCTAACGATGCTTGG]
[+] EMBL BM580615 [CCGTTCCCACTTGTTCTTTTCCTGTAAATCTAAAGTAAAGGTTTTGACTATCTAAAGTGCGAGGTTGTACAGAAGAAGCAGAAGAAGATTTACATTGAATAAAAGTAAGAGCCGACTTCGGTCGGTATATATTGTTGCAAAAGGGGATTTGCAAAAGGGGACGAAACAGAGGGAGCTGGAAGATCTTGTCTTAACTTGTACCAAACATTAATCGGAAGAAGTTCATGTGTATGGCCACTAATATTAATATTTATGCAGTGAGTTATAGTTGCTTGTGTATGAAAGTATGAACAAGTATCAAACCAAACTTGTAGCCGGGACAGGCACTGGTGCAGCGGTGTTGACGGAACAAGTCGATCCCTTAGGCAAAAATACACAAGATGAAAGGAAGAAACCGACAGCAGTCGGAAGTATTACCCGTGAAGTCGCATCGAACAGCAACGATAATGGGCAGTATACGGATGCAATGAAATTAGACCCATCCCGCATAGAGATTGAAAGCGTTTTAGCGAATGCTATTAAAATAGAAAACTTTACAGAAGAGGACAGTGTCTTCAATGAAGAAAGCATCCCGCTTGATACAATACGGTTACCAAAGAGAAAATATTTCGGGGATAAAGAGTTGGAAGACGATTCCAGTATTACATCAAAATCGCAAGACTCTAACGATGCTTGG]
consensusID : consensus_9261#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 449 fasta sequence
[CCGCCCACGCGTCCGGCGAGGAGCAGCCTGGTTCTTCCCGTAAGCCTCTGTGGCCCAGAATCTAGGGGCGCAGTTCAAAAAAGAGCAAGAAGACACAGTTTCAGGTACGATGCATGAAAAAGCATGAACTTATAAAAATATGAATCGTACCTCTTACCAAGAGCCACATTAAAACAGTGTAAAATGGGGATGTGCGCAAACAACAACAATAGGGGAATTATTACTCTTCAGTTAATATAACTTTTTTTTGTTGAATATTTACAATATCAAAACGCGCATTGTGCCTTCGCTGATCGTGTGTCGTTGGACGCTAAGCATTAGCGCGCAGCCTCCTCTTCCGTCAAACAAAGAGGTCAAACATCTGCCCTCCCCCCCGGAACACATTAGTTAGTACCGCAGCCAGAAGAATGTAACAAACAAATAGACAAACAAATATTGAGCTGAAGGGC]
[+] EMBL BM582019 [CCGCCCACGCGTCCGGCGAGGAGCAGCCTGGTTCTTCCCGTAAGCCTCTGTGGCCCAGAATCTAGGGGCGCAGTTCAAAAAAGAGCAAGAAGACACAGTTTCAGGTACGATGCATGAAAAAGCATGAACTTATAAAAATATGAATCGTACCTCTTACCAAGAGCCACATTAAAACAGTGTAAAATGGGGATGTGCGCAAACAACAACAATAGGGGAATTATTACTCTTCAGTTAATATAACTTTTTTTTGTTGAATATTTACAATATCAAAACGCGCATTGTGCCTTCGCTGATCGTGTGTCGTTGGACGCTAAGCATTAGCGCGCAGCCTCCTCTTCCGTCAAACAAAGAGGTCAAACATCTGCCCTCCCCCCCGGAACACATTAGTTAGTACCGCAGCCAGAAGAATGTAACAAACAAATAGACAAACAAATATTGAGCTGAAGGGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9261#0 CCCCGNGGTTCAATTGCGCTTTATTTTTGACACAATTTCGGTAGGTCCGGTATCGCAGTC 60
consensus_9261#3 ------------------------------------------------------------
consensus_9261#1 ------------------------------------------------------------
consensus_9261#2 ------------------------------------------------------------
consensus_9261#0 AGTGGGTTTTTAACTTACGCCTCAAAACACACGAAACGGTCGAACGGGGGGGTCGCGCCT 120
consensus_9261#3 ------------------------------------------------------------
consensus_9261#1 ------------------------------------------------------------
consensus_9261#2 ------------------------------------------------------------
consensus_9261#0 CCTTTTCTCATTGTGACATAGGGAAAGGGGCGAAGATTTGCATGAGGGCACCAGGGTTTA 180
consensus_9261#3 ------------------------------------------------------------
consensus_9261#1 ------------------------------------------------------------
consensus_9261#2 ------------------------------------------------------------
consensus_9261#0 CTACAGGGCCTACTACTGAGAGAGATGAGATCAAGATTAGATCTTCGTCTTCGCCTAGGT 240
consensus_9261#3 ------------------------------------------------------------
consensus_9261#1 ------------------------------------------------------------
consensus_9261#2 ------------------------------------------------------------
consensus_9261#0 TTCGTCCCGCAGCAGATATACCTCTGTGTGTATCTGGTAGCCTGTTTGTGTGTGTATGTA 300
consensus_9261#3 ------------------------------------------------------------
consensus_9261#1 ------------------------------------------------------------
consensus_9261#2 ------------------------------------------------------------
consensus_9261#0 TGTGTGTATGTAACTCTTTTCGTACAGGGCTTTTGGGTAGGCACATTTTATGATGAACGC 360
consensus_9261#3 ------------------------------------------------------------
consensus_9261#1 ------------------------------------------------------------
consensus_9261#2 ------------------------------------------------------------
consensus_9261#0 ATTAAAATTCAATGTATCGCTCTACGCACTCAATGCACTCAATGGGGGAACCAGCAGCAA 420
consensus_9261#3 ------------------------------------------------------------
consensus_9261#1 ------------------------------------------------------------
consensus_9261#2 ------------------------------------------------------------
consensus_9261#0 AACATAATGCAGTGGGCTGGATCACTGTTTAGTAAACCTTTATCTGCACACTATAACTGT 480
consensus_9261#3 ------------------------------------------------------------
consensus_9261#1 ------------------------------------------------------------
consensus_9261#2 ------------------------------------------------------------
consensus_9261#0 TACTATTGCAAATTCTGTGGTTTCCGTCTCCCTCTATTTCTCCTTTTAAAAGGGTTTATT 540
consensus_9261#3 ------------------------------------------------------------
consensus_9261#1 ------------------------------------------------------------
consensus_9261#2 ------------------------------------------------------------
consensus_9261#0 TTCACGTTAATTTCCCACTTGTTCTTTTCCTGTAAATCTAAAGTAAAGGTTTTGACTATC 600
consensus_9261#3 ------------------------------------------------------------
consensus_9261#1 ------------------------------------------------------------
consensus_9261#2 ------------------------------------------------------------
consensus_9261#0 TAAAGTGCGAGGTTGTACAGAAGAAGCAGAAGAAGAANACGAAGACACGCAAAAAACCCC 660
consensus_9261#3 ------------------------------------------------------------
consensus_9261#1 ---------------------------------------------------------CCG 3
consensus_9261#2 ------------------------------------------------------------
consensus_9261#0 GCGTTGATACTAATGCTAACATGATATTGATGATATGATGGAAGAGAGCGTGAGGGGGTG 720
consensus_9261#3 ------------------------------------------------------------
consensus_9261#1 GCGGCGGCGGTGGCGGTG--GTGGCGGAAGTGCACAGAAGAACAAGCGCATGGTCGATGA 61
consensus_9261#2 ------------------------------------------------------------
consensus_9261#0 AGATAGAGAAATGATTGTGTTTTCCTTCCGCTATTA-ATTTTTATAACCTTCCATACAAG 779
consensus_9261#3 ------------------------------------------------------------
consensus_9261#1 GGATGGGTTTATGCTGCCGGCCAACTCGCGCAACAATGCCTGGACCATGCTATCGATCGA 121
consensus_9261#2 ------------------------------------------------------------
consensus_9261#0 AAAAAAAGAGAAAAATCCAGCCGCAAATAGGAAAACAGTTGAACGACGCGAGGGAGAATG 839
consensus_9261#3 ------------------------------------------------------------
consensus_9261#1 TCCGAAGAAGATAAACATTTCGGCACCTAAACCGCAGACTGGTGAAACGCGCCTCGGATC 181
consensus_9261#2 ------------------------------------------------------------
consensus_9261#0 TGTTTTCATGAAACAAAACAAAAAAAAAGAAGCAGA-GATATACTCGATAAAAAAGAAGC 898
consensus_9261#3 ------------------------------------------------------------
consensus_9261#1 GGCCTCCATGTTCCAGGGCTGGGGTGGAAAAACAAACAACGTGTTCGCGTCCCTCAACAT 241
consensus_9261#2 ------------------------------------------------------------
consensus_9261#0 CGTACTAATATGTATACATTAGTTGATTAGTTAGGACGCAAAACCGATTAAAAATTGAGA 958
consensus_9261#3 ------------------------------------------------------------
consensus_9261#1 TGACGAGTCGGCTGCCCAACCGCCAAGCTTCTTCGGTGCGTCCGGTCCGATGGGTGGTGG 301
consensus_9261#2 ------------------------------------------------------------
consensus_9261#0 AGCGAGGCGATATCTTTAAGATCCTCTCTACCATCCCCCCGCCCCCGACACACAAACACA 1018
consensus_9261#3 ------------------------------------------------------------
consensus_9261#1 CAGTAGTGGTGGTGGTGGTGGTGGAAGTGGCGGAAGTGGCGGCAGCGGTGGTGGTGGACG 361
consensus_9261#2 ------------------------------------------------------------
consensus_9261#0 CACACGGTTCTAAGCCAAAACATGCAACAATTGGTGCGGTTGCAGTATGAAACATTTAAA 1078
consensus_9261#3 ------------------------------------------------------------
consensus_9261#1 -AGGAGGTGGTGGTGGTGGAGGTGGTTCCAAGGGTTCGCAATCCCACAAAAAGGGTGGCG 420
consensus_9261#2 ------------------------------------------------------------
consensus_9261#0 GCAGAAACTGCTTCCATAAGTACAGTGTTCCCAGCAGACTGT-GTGAACTGTTAAACAAA 1137
consensus_9261#3 ------------------------------------------------------------
consensus_9261#1 GCGGCGGCGGTGGCAACAACTCTAAAACGCCCCATTACCTCG-GCCGAACCAGCAGCCAC 479
consensus_9261#2 -------CCGTTCCCACTTGTTC--TTTTCCTGTAAATCTAAAGTAAAGGTTTTGACTAT 51
consensus_9261#0 AAAGAAGAAAAAAGCTAACCGTTTAAAAAACAAAAGTATGGCACAGAACGGCGGATTGGG 1197
consensus_9261#3 ------------------------------------------------------------
consensus_9261#1 TTGTGATAGGGCAATCATCAGCAGCAATGATCGATCGACACCGAACAGCAGCACTAACCC 539
consensus_9261#2 CTAAAGTGCGAGGTTGTACAGAAGAAGCAGAAGAAGATTTACATTGAATAAAAGTAAGAG 111
consensus_9261#0 TAAAGCAGCATTAATATATACATGAATGAGCAAAAAAAAAAAAAGGGAAAGCAAAGCAGA 1257
consensus_9261#3 ------------------------------------------------------------
consensus_9261#1 CCCGGCCATCATCATCCACGTGCAATGAGGTAACAGTGGAGAGAGAGAGAGAGAAATGGG 599
consensus_9261#2 C----CGACTTCGGTCGGTATATATTGTTGCAAAAGGGGATTTGCAAAAGGGGACGAAAC 167
consensus_9261#0 AATAGCACCATATATATTAGCAATATAAACCATACATTATATATAAACCACATGAGAAAA 1317
consensus_9261#3 ------------------------------------------------------------
consensus_9261#1 AGAGAAAC---ACACAGCAGCCAAGGAGTGCGGCTGCAAAAT-TGTGAAGCGCTGGCGCA 655
consensus_9261#2 AGAGGGA------------GCTGGAAGATCTTGTCTTAACTTGTACCAAACATTAATCGG 215
consensus_9261#0 CAAGAAACAACGTGTTTGATGAATATAGACTAAAACAAAGGAAGAGGAGGATGGTGCTGC 1377
consensus_9261#3 ------------------------------------------------------------
consensus_9261#1 GAAATGATCGAGAAAATCACGAGAAGAAGCTAAATTTGCTGCGAAAGATGAGGGTAG--- 712
consensus_9261#2 AAGAAGTTCATGTGTATGGCCACTA-ATATTAATATTTATGCAGTGAGTTATAGTTG--- 271
consensus_9261#0 TCCTCGCAGGAAACATGCAAC-AGTGCAACCTGGTTCTTCCCGTAAGCCTCTGTGGCCCA 1436
consensus_9261#3 -CCGCCCACGCGTCCGGCGA--GGAGCAGCCTGGTTCTTCCCGTAAGCCTCTGTGGCCCA 57
consensus_9261#1 ---ATGATGGAGGTGCGCGAGTGGGGCTGCTCTGTTTTGTT--TACGCTACTACCACATC 767
consensus_9261#2 CTTGTGTATGAAAGTATGAACAAGTATCAAACCAAACTTGT----AGCCGGGACAGGCAC 327
* * * * **
consensus_9261#0 GAATCTAGGGGCGCAGTTCAAAAAAGAGCAAGAAGACACAGTTTCAGGTACGATGCATGA 1496
consensus_9261#3 GAATCTAGGGGCGCAGTTCAAAAAAGAGCAAGAAGACACAGTTTCAGGTACGATGCATGA 117
consensus_9261#1 CCAATTGCGCTTTATTTTTGACACAATTTCGGTAGGTCCGGTATCGCAGTCAGTTGGTTT 827
consensus_9261#2 TGGTGCAGCGGTGTTGACGGAACAAGTC---GATCCCTTAGGCAAAAATACACAAGATGA 384
* * * * * *
consensus_9261#0 AAAAGCATGAACTTATAAAAATATGAATCGTACCTCTTACCAAGA---GCCACATTAAAA 1553
consensus_9261#3 AAAAGCATGAACTTATAAAAATATGAATCGTACCTCTTACCAAGA---GCCACATTAAAA 174
consensus_9261#1 TTAA-CTTACGCCTCAAAACACACGAAACGGTCGAACGGGGGGGTCGCGCCTCCTTTTCT 886
consensus_9261#2 AAGG-AAGAAACCGACAGCAGTCGGAA--GTATTACCCGTGAAGT---CGCATCGAACAG 438
* * *** * * *
consensus_9261#0 CAGTGTAAAATGGGGATGTGCGCAAACAACAACAATAGGGGAAT----TATTACTCTTCA 1609
consensus_9261#3 CAGTGTAAAATGGGGATGTGCGCAAACAACAACAATAGGGGAAT----TATTACTCTTCA 230
consensus_9261#1 CATTGTGACATAGGGAAAGGGGCGAAGATTTGCATGAGGG--------CACCAGGGTTTA 938
consensus_9261#2 CAACGATAATGGGCAGTATACGGATGCAATGAAATTAGACCCATCCCGCATAGAGATTGA 498
** * * * * * * ** * ** *
consensus_9261#0 GTTAATATAACTTTTTTTTGTTGAATATTTACAATATCA-AAACGCGCATTGTGCTTTCG 1668
consensus_9261#3 GTTAATATAACTTTTTTTTGTTGAATATTTACAATATCA-AAACGCGCATTGTGCCTTCG 289
consensus_9261#1 CT--ACAGGGCCTACTACTGAGAGAGAT----GAGATCA-AGATTAGATCTTCGTCTTCG 991
consensus_9261#2 AAGCGTTTTAGCGAATGCTATTAAA-ATAGAAAACTTTACAGAAGAGGACAGTGTCTTCA 557
* * * ** * * * * * * * ***
consensus_9261#0 CT---GATCGTGTGTCGTTGGACGCTAAGCA-TTAGCGCGCAGCCTCCTCTTCCGTCAAA 1724
consensus_9261#3 CT---GATCGTGTGTCGTTGGACGCTAAGCA-TTAGCGCGCAGCCTCCTCTTCCGTCAAA 345
consensus_9261#1 CCTA-GGTTTCGTCCCGCAGCA-GATATACC-TCTGTGTGTA-TCTGGTAGCCTGTTTGT 1047
consensus_9261#2 ATGAAGAAAGCATCCCGCTTGATACAATACGGTTACCAAAGAGAAAATATTTCGGGGATA 617
* * ** * * * * * * *
consensus_9261#0 CAAAGAGGTCAAACATCTGCCCT-CCCCCCCGGAACACATTAGTTAGTACCGCAGCCAGA 1783
consensus_9261#3 CAAAGAGGTCAAACATCTGCCCT-CCCCCCCGGAACACATTAGTTAGTACCGCAGCCAGA 404
consensus_9261#1 GTGTGTATGTATGTGTGTATGTAACTCTTTTCGTACAGTTGGCTTTTTTGGGTAGGCACA 1107
consensus_9261#2 AAGAGTTGGAAGACGATTCCAGTATTACATCAAAAT-CGCAAGACTCTAACGATGCTTGG 676
* * * * * * *
consensus_9261#0 AGAATGTAACAAACAAATAGACAAACAA-ATATTGAGCTGAAGGGCAAACAAAAAATAAA 1842
consensus_9261#3 AGAATGTAACAAACAAATAGACAAACAA-ATATTGAGCTGAAGGGC-------------- 449
consensus_9261#1 TTT-TATGATGAACGCATTAAAATTCAATGTATCGCTCTACGCACTCNAT---------- 1156
consensus_9261#2 ------------------------------------------------------------
consensus_9261#0 CAGCTGGATAAGCATTAGGAAGA 1865
consensus_9261#3 -----------------------
consensus_9261#1 -----------------------
consensus_9261#2 -----------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||