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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9280#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1325 fasta sequence
[TACGCATCACACTTGTACGCCAACTACATCGACATGTAGCGTGGTTACGGTGTTTTGTGCTGTTATATTTTGTTGTTTTTTCTCACAATTGTGCCTAGACCAGAAAAGACAAGCTAAGCTTGTATTTATTTACCTTCTAACAACATCCCAAGTGCATTTATCGCTTCACTATTACCTCACACCATCAACGTGGCTGGAAGATGGAAGAAACCACGCAAAACTTTTCGAAAAGCAGACAACAGAAGCGAAAGCTGCCCAACAGTGAGCAAAGCGGAGC-C-TTGGAAAG-AAGAGCCGCCTCGGCACGGATGTCGGTGCGCTGGTGAAGCTGCCAGCCCACGGCTACCCGTTGGAGCATCCGTTCAACAAGGATGGATACCGATACATACTGGCAGAACCCGATCCTCACGCACCGTTCCGGCAAGAGTTTGACGAAAGCGCTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGTGTTGTCGCCGAACGCTGTGCTGATCGCATTGCAC-GATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCGACTGTCGATAACGGGCGAGAAGGGTTATTGCATGGCACGGGCTTCTCATTATGTCACCAAAGGATGCTGGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCGTCTGGGATGGGGACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAACATTACAGTGCGGGGTATGGCGA-GGGGGACACGCTCGGATTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCACCTGTATTACGAGGACAAGGACCGTGTGAATGAAACGCTGAAGGCGCTG-AAAGTGCAGCCGGGCAGTAAGATTCACTATTTTAAGAACGGCGTCTGTCAGGGGGAGGCATTTGTGGACGTGTACAAAGGTGCCTACTATCCGGCAATATCGTTGCACAAAAACGTAACGATCAGTGTGAATTTTGGACCGAAATTTAAGCACCCAGAGGTGCTGAAAGAGTTCAAAGCCCAGTCGATGCACGAACGAGTGGAAGAAATGATCTGCGAGCAAACCATGGCCGACATGATGTACTTTACGGAAAATGATGGAAAGCTTCGACTCGACACCTACAGCATCTAAATGGCGATCCTGTTGTTAGGAGTGGAACGGAATAAACACTCAGAAGATGCTACAAACAATCATTTGTAACATTGCCCCATAA]
[+] EMBL CNS09Q0X [TACGCATCACACTTGTACGCCAACTACATCGACATGTAGCGTGGTTACGGTGTTTTGTGCTGTTATATTTTGTTGTTTTTTCTCACAATTGTGCCTAGACCAGAAAAGACAAGCTAAGCTTGTATTTATTTACCTTCTAACAACATCCCAAGTGCATTTATCGCTTCACTATTACCTCACACCATCAACGTGGCTGGAAGATGGAAGAAACCACGCAAAACTTTTCGAAAAGCAGACAACAGAAGCGAAAGCTGCCCAACAGTGAGCAAAGCGGAGC C TTGGAAAG AAGAGCCGCCTCGGCACGGATGTCGGTGCGCTGGTGAAGCTGCCAGCCCACGGCTACCCGTTGGAGCATCCGTTCAACAAGGATGGATACCGATACATACTGGCAGAACCCGATCCTCACGCACCGTTCCGGCAAGAGTTTGACGAAAGCGCTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGTGTTGTCGCCGAACGCTGTGCTGATCGCATTGCAC GATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCGACTGTCGATAACGGGCGAGAAGGGTTATTGCATGGCACGGGCTTCTCATTATGTCACCAAAGGATGCTGGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCGTCTGGGATGGGGACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAACATTACAGTGCGGGGTATGGCGAGGGGGGACACGCTCGGATTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCACCTGTATTACGAGGACAAGGACCGTGTGAATGAAACGCTGAAGGGGCTG AAAGTGCAGCCGGGCAGTAAGATTCACTATTTTAAGAACGGCGTC ]
[+] EMBL CNS09JDB [ ATCACACTTGTACGCCAACTACATCGACATGTAGCGTGGTTACGGTGTTTTGTGCTGTTATATTTTGTTGTTTTTTCTCACAATTGTGCCTAGACCCCAAAAGACAAGCTAAGCTTGTATTTATTTACCTTCTAACAACATCCCAAGTGCATTTATCGCTTCACTATTACCTCACACCATCAACGTGGCTGGAAGATGGAAGAAACCACGCAAAACTTTTCGAAAAGCAGACAACAGAAGCGAAAGCTGCCCAACAGTGAGCAAAGCGTAGCGCTTTGGAAAGCAAGAGCCGCCTCGGCACGGATGTCGGTGCGCTGGTGAAGCTGCCAGCCCACGGCTACCCGTTGGAGCATCCGTTCAACAAGGATGGATACCGATACATACTGGCAGAACCCGATCCTCACGCACCGTTCCGGCAAGAGTTTGACGAAAGCGCTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGTGTTGTCGCCGAACGCTGTGCTGATCGCATTGCAC GATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCGACTGTCGATAACGGGCGAGAAGGGTTATTGCATGGCACGGGCTTCTCATTATGTCACCAAAGGATGCTGGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCGTCTGGGATGGGGACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAACATTACAGTGCGGGGTATGGCGA GGGGGACACGCTCGGATTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCACCTGTATTACGAGGACAAGGACCGTGTGAATAAAACGCTGAAGG GCTGAAAAGTGCAGCCGGGCAGTAAGATTCACTATTTTAAGAACG ]
[-] EMBL CNS08XCV [ CCCGATCCGCACGCAACGTTCCGGCAAGAGTTTGACGAAAGCGCTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGAACTGTCGCCGAACGCGGTGCTGATCGCATTGCAC GATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCAACTGTCGATAACGGGCGAGAAGGGTTACTGCATGGCACGGGCTTCTCATTACGTTACCAAAGGATGCTGGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCGTCTGGGATGGGGACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAGCATTACAGCGCGGGGTATGGCGA GGGGGACACGCTCGGCTTTCTGATCAAACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCATCTGTATTACGAGGACAAGGGCCGTGTGAATGAAACGCTGAAGGCGCTG AAAGTGCAGCCGGGCAGTAAGATTCACTATTTTAAGAACGGCGTCTGTCAGGGGGAGGCATTTGTGGACGTGTACAAAGGTGCCTACTATCCGGCAATATCGTTGCACAAAAACGTAACGATCAGTGTGAATTTTGGACCGAAATTTAAGCACCCAGAGGTGCTGAAAGAGTTCAAAGCCCAGTCGATGCACGAACGAGTGGAAGAAATGATCTGCGAGCAAACCATGGCCGACATGATGTACTTTACGGAAAATGATGGAAAGCTTCGACTCGACACCTACAGCATCTAAATGGCGATCCTGTTGTTAGGAGTGGAACGGAATAAACACTCAGAAGATGCTACAAACAATCATTGGTAACATTG ]
[-] EMBL CNS09CRB [ GATCCTCACGCCACGTTCCGGCAAGAGTTTGACGAAAGCGCTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGTGTTGTCGCCGAACGCTGTGCTGATCGCATTGCAC GATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCAACTGTCGATAACGGGCGAGAAGGGTTATTGCATGGCACGGGCTTCTCATTATGTCACCAAAGGATGCTGGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCGTCTGGGATGGGGACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATT ]
[-] EMBL CNS09Q0Y [ TTTGACGAAAGCGCTGACTGGGCAGGCAAACCGATACCGGGCT GCTGTATCGAGTGTTGTCGCCGAACGCTGTG TGATCGCATTG ACGGATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCAACTGTCGATAACGGGCGAGAAGGGTTATTGCATGGCACGGGCTTCTCATTATGTCACCAAAGGATGCTGGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGCCCTGCCGTCTGGGATGGGGACAGGAGTACGCCAATCTGCAGGCACAACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAACATTACAGTGCGGGGTATGGCGA GGGGGACACGCTCGGATTTCTGATCAAACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCACCTGTATTACGAGGACAAGGACCGTGTGAATGAAACGCTGAAGGCGCTG AAAGTGCAGCCGGGCAGTAAGATTCACTATTTTAAGAACGGCGTCTGTCAGGGGGAGGCATTTGTGGACGTGTACAAAGGGGCCTACTATCCGGCAATATCGTTGCACAAAAACGTAACGATCAGTGTGAATTTTGGACCGAAATTTAAGCACCCAGAGGTGCTGAAAGAGTTCAAAGCCCAGTCGATGCACGAACGAGTGGAAGAAATGATCTGCGAGCAAACCATGGCCGACATGATGTACTTTACGGAAAATGATGGAAAGCTTCGACTCGATACCTACAGCATCTAAATGGCGATCATGTTGTTAGGAGTGGAACGGAATAAACACTCAGAAGATGCTACAAACAATCATTTGTAACATgc ]
[-] EMBL CNS09JDC [ AAACCGATACCGGGCTGGCTGTATCGAGTGTTGTCGCCGAACGCTGTGCTGATCGCATTGCAC GATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCCACTGTCGATAACGGGCGAGAAGGGTTATTGCATGGCACGGGCTTCTCATTATGTCACCAAAGGATGCTGGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCCTCTGGGATGGGGACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAACATTACAGTGCGGGGTATGGCGA GGGGGAAACGCTCGGATTT ]
[-] EMBL CNS08RY2 [ GCATTGCAC GATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCCACTGTCGATAACGGGCGAGAAGGGTTACTGCATGGCACGGGCTTCTCATTACGTTACCAAAGGATGCTGGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCGTCTGGGATGGGGACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAGCATTACAGCGCGGGGTATGGCGA GGGGGACACGCTCGGCTTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCATCTGTATTACGAGGACAAGGACCGTGTGAATGAAACGCTGAAGGCGCTG AAAGTGCAGCCGGGCAGTAAGATTCACTATTTTAAGAACGGCGTCTGTCAGGGGGAGGCATTTGTGGACGTGTACAAAGGTGCCTACTATCCGGCAATATCGTTGCACAAAAACGTAACGATCAGTGTGAATTTTGGACCGAAATTTAAGCACCCAGAGGTGCTGAAAGAGTTCAAAGCCCAGTCGATGCACGAACGAGTGGAAGAAATGATCTGCGAGCAAACCATGGCCGACATGATGTACTTTACGGAAAATGATGGAAAGCTTCGACTCGACACCTACAGCATCTAAATGGCGATCCTGTTGTTAGGAGTGGAACGGAATAAACACTCAGAAGATGCTACAAACAATCATTTATAACATTGCCCCATAA]
[+] EMBL CNS09CRA [ AAAGGTATCCGAGGATCGACTGTCGATAACGGGCGAGAAGGGTTATTGCATGGCACGGGCTTCTCATTATGTCACCAAAGGATGCTGGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCGTCTGGGATGGGGACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAACATTACAGTGCGGGGTATGGCGA GGGGGACACGCTCGGATTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAA ]
[-] EMBL CNS08XLV [ ATGGCACGGGCTTCTCATTACGTTACCAAAGGATGCTGGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCGTCTGGGATGGGGACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAGCATTACAGCGCGGGGTATGGCGA GGGGGACACGCTCGGCTTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCATCTGTATTACGAGGACAAGGACCGTGTGAATGAAACGCTGAAGGCGCTG AAAGTGCAGCCGGGCAGTAAGATTCACTATTTTAAGAACGGCGTCTGTCAGGGGGAGGCATTTGTGGACGTGTACAAAGGTGCCTACTATCCGGCAATATCGTTGCACAAAAACGTAACGATCAGTGTGAATTTTGGACCGAAATTTAAGCACCCAGAGGTGCTGAAAGAGTTCAAAGCCTAGTCGATGCACGAACGAGTGGAAGAAATGATCTGCGAGCAAACCATGGCCGACATGATGTACTTTACGGAAAATGATGGAAAGCTTCGACTCGACACCTACAGCATCTAAATGGCGATCCTGTTGTTAGGAGTGGAACGGAATAAACACTCAGAAGATGCTACAAACAATCATTTG ]
consensusID : consensus_9280#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1208 fasta sequence
[TCTCCCTAGCGTGGTTAGGTGTTTTGTGCTGTTATATTTTGTTGTTTTTTCTCACAATTGTGCCTAGACCAGAAAAGACAAGCTAAGCTTGTATTTATTTACCTTCTAACAACATCCCAAGTGCATTTATCGCTTCACTATTACCTCACACCATCAACGTGGCTGGAAGATGGAAGAAACCACGCAAAACTTTTCGAAAAGCAGACAACAGAAGCGAAAGCTGCCCAACAGTGAGCAAAGCGGAGCCTTGGAAAGAAGAGCCGCCTCGGCACGGATGTCGGTGCGCTGGTGAAGCTGCCAGCCCACGGCTACCCGTTGGAGCATCCGTTCAACAAGGATGGATACCGGTACATACTGGCAGAACCCGATCCGCACGCACCGTTCCTGCAAGAGTTTGACGAAAGCGCTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGTACTGTCGCCGAACGCGGTGCTGATCGCATTGCACGATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCGACTGTCGATAACGGGCGAGAAGGGTTACTGCATGGCACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAGCATTACAGCGCGGGGTATGGCGAGGGGGACACGCTCGGCTTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCATCTGTATTACGAGGACAAGGACCGTGTGAATGAAACGCTGAAGGCGCTGAAAGTGCAGCCGGGCAGTAAGATTCACTATTTTAAGAACGGCGTCTGTCAGGGGGAGGCATTTGTGGACGTGTACAAAGGTGCCTACTATCCGGCAATATCGTTGCACAAAAACGTAACGATCAGTGTGAATTTTGGACCGAAATTTAAGCACCCAGAGGTGCTGAAAGAGTTCAAAGCCCAGTCGATGCACGAACGAGTGGAAGAAATGATCTGCGAGCAAACCATGGCCGACATGATGTACTTTACGGAAAATGATGGAAAGCTTCGACTCGACACCTACAGCATCTAAATGGCGATCCTGTTGTTAGGAGTGGAACGGAATAAACACTCAGAAGATGCTACAAACAATCATTTGTAACATTGCCGAGATAAAAAAAA]
[+] EMBL CNS08QKG [TCTCCCTAGCGTGGTTAGGTGTTTTGTGCTGTTATATTTTGTTGTTTTTTCTCACAATTGTGCCTAGACCAGAAAAGACAAGCTAAGCTTGTATTTATTTACCTTCTAACAACATCCCAAGTGCATTTATCGCTTCACTATTACCTCACACCATCAACGTGGCTGGAAGATGGAAGAAACCACGCAAAACTTTTCGAAAAGCAGACAACAGAAGCGAAAGCTGCCCAACAGTGAGCAAAGCGGAGCCTTGGAAAGAAGAGCCGCCTCGGCACGGATGTCGGTGCGCTGGTGAAGCTGCCAGCCCACGGCTACCCGTTGGAGCATCCGTTCAACAAGGATGGATACCGGTACATACTGGCAGAACCCGATCCGCACGCACCGTTCCTGCAAGAGTTTGACGAAAGCGCTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGTACTGTCGCCGAACGCGGTGCTGATCGCATTGCACGATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCGACTGTCGATAACGGGCGAGAAGGGTTACTGCATGGCACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAGCATTACAGCGCGGGGTATGGCGAGGGGGACACGCTCGGCTTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCATCTGTATTACGAGGACAAGGACCGTGTGAATGAAACGCTGAAGGCGCTGAAAGTGCAGCCGGGCAGTAAGATTCACTATTTTAAGAACGGCGTCTGTCAGGGGGAGGCATTTGTGGACGTGTACAAAGGTGCCTACTATCCGGCAATATCGTTGCACAAAAACGTAACGATCAGTG ]
[-] EMBL CNS08QKH [ TGCCAGCCCACGGCTACCCGGTGGAGCATCCGTTCAACAAGGATGGATACCGGTACATACTGGCAGAACCCGATCCGCACGCACCGTTCCGGCAAGAGTTTGACGAAAGCGCTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGAACTGTCGCCGAACGCGGTGCTGATCGCATTGCACGATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCAACTGTCGATAACGGGCGAGAAGGGTTACTGCATGGCACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAGCATTACAGCGCGGGGTATGGCGAGGGGGACACGCTCGGCTTTCTGATCAAACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCATCTGTATTACGAGGACAAGGACCGTGTGAATGAAACGCTGAAGGCGCTGAAAGTGCAGCCGGGCAGTAAGATTCACTATTTTAAGAACGGCGTCTGTCAGGGGGAGGCATTTGTGGACGTGTACAAAGGTGCCTACTATCCGGCAATATCGTTGCACAAAAACGTAACGATCAGTGTGAATTTTGGACCGAAATTTAAGCACCCAGAGGTGCTGAAAGAGTTCAAAGCCCAGTCGATGCACGAACGAGTGGAAGAAATGATCTGCGAGCAAACCATGGCCGACATGATGTACTTTACGGAAAATGATGGAAAGCTTCGACTCGACACCTACAGCATCTAAATGGCGATCCTGTTGTTAGGAGTGGAACGGAATAAACACTCAGAAGATGCTACAAACAATCATTTGTAACATTGCCGAGATAAAAAAAA]
[+] EMBL BX615428 [ AAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAGCATTACAGCGCGGGGTATGGCGAGGGGGACACGCTCGGGTTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCATCTGTATTACGAGGACAAGGACCGTGTGAATGAAACGCTGAAGGCGCTGAAAGTGCAGCCGGGCAGTAAGATTCACTATTTTAAGAACGGCGTCTGTCAGGGGGAGGCATTTGTGGACGTGTACAAAGGTGCCTACTATCCGGCAATATCGTTGCACAAAAACGTAACGATCAGTGTGAATTTTGGACCGAAATTTAAGCACCCAGAGGTGCTGAAAGAGTTCAAAGCCCAGTCGATGCACGAACGAGTGGAAGAAATGATCTGCGAGCAAACCATGGCCGACATGATGTACTTTACGGAAAATGATGGAAAGCTTCGACTCGACACCTACAGCATCTAAATGGCGATCCTGTTGTTAGGAGTGGAACGGAATAAACACTCAGAAGATGCTACAAACAATCATTTGTAAC ]
consensusID : consensus_9280#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 957 fasta sequence
[ACTGGAGTTGCTATTATT-CCCACCCAAAAGATAAGCGAGTTGTTACGCATCCCACTTGTACGCCAACTACATCGACATGTAGCGTGGTTACGGTGTTTTGTGCTGTTATATTTTGTTGTTTTTTCTCACAATTGTGCCTAGACCAGAAAAG-ACAAGCTAAGCTTGTATTTATTTACCTTCTAACAACATCCCAAGTGCATTTATCGCTTCACTATTACCTCACACCATCAACGTGGCTGGAAGATGGAAGAAACCACGCAAAACTTTTCGAAAAGCAGACAACAGAAGCGAAAGCTGCCAGCCCACGGCTACCCGTTGGAGCATCCGTTCAACAAGGATGGATACCGGTACATACTGGCAGAACCCGATCCGCACGCACCGTTCCGGCAAGAGTTTGACGAAAGCGCTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGTACTGTCGCCGAACGCGGTGCTGATCGCATTGCACGATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCGACTGTCGATAACGGGCGAGAAGGGTTACTGCATGGCACGGGCTTCTCATTACGTTACCAAAGGATGCTGGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCGTCTGGGATGGGGACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAGCATTACAGCGCGGGGTATGGCGAGGGGGACACGCTCGGCTTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCATCTGTATTACGAGGACAAGGGCCGTGTGAATGAAACGCTGAAGGGCTGAAAGTGCAGCCGGGCAGTAAGATTCACTATTTTAAGA]
[+] EMBL CNS08RY1 [ACTGGAGTTGCTATTATTCCCCACCCAAAAGATAAGCGAGTTGTTACGCATCCCACTTGTACGCCAACTACATCGACATGTAGCGTGGTTACGGTGTTTTGTGCTGTTATATTTTGTTGTTTTTTCTCACAATTGTGCCTAGACCAGAAAAG ACAAGCTAAGCTTGTATTTATTTACCTTCTAACAACATCCCAAGTGCATTTATCGCTTCACTATTACCTCACACCATCAACGTGGCTGGAAGATGGAAGAAACCACGCAAAACTTTTCGAAAAGCAGACAACAGAAGCGAAAGCTGCCAGCCCACGGCTACCCGTTGGAGCATCCGTTCAACAAGGATGGATACCGGTACATACTGGCAGAACCCGATCCGCACGCACCGTTCCGGCAAGAGTTTGACGAAAGCGCTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGTACTGTCGCCGAACGCGGTGCTGATCGCATTGCACGATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCGACTGTCGATAACGGGCGAGAAGGGTTACTGCATGGCACGGGCTTCTCATTACGTTACCAAAGGATGCTGGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCGTCTGGGATGGGGACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAGCATTACAGCGCGGGGTATGGCGAGGGGGACACGCTCGGCTTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCAT ]
[+] EMBL CNS08XCU [ GAGTTGCCCCTATT CCCACCCAAAAGATAAGCGAGTTGTTACGCATCCCACTTGTACGCCAACTACATCGACATGTAGCGTGGTTACGGTGTTTTGTGCTGTTATATTTTGTTGTTTTTTCTCACAATTGTGCCTAGACCAGAAAAG ACAAGCTAAGCTTGTATTTATTTACCTTCTAACAACATCCCAAGTGCATTTATCGCTTCACTATTACCTCACACCATCAACGTGGCTGGAAGATGGAAGAAACCACGCAAAACTTTTCGAAAAGCAGACAACAGAAGCGAAAGCTGCCAGCCCACGGCTACCCGTTGGAGCATCCGTTCAACAAGGATGGATACCGGTACATACTGGCAGAACCCGATCCGCACGCACCGTTCCGGCAAGAGTTTGACGAAAGCGCTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGTACTGTCGCCGAACGCGGTGCTGATCGCATTGCACGATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCGACTGTCGATAACGGGCGAGAAGGGTTACTGCATGGCACGGGCTTCTCATTACGTTACCAAAGGATGCTGGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCGTCTGGGATGGGGACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAGCATTACAGCGCGGGGTATGGCGAGGGGGACACGCTCGGCTTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGGCATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCATCTGTATTACGAGGACAAGGGCCGTGTGAATGAAACGCTGAAGGGCTGAAAGTGCAGCCGGGCAGTAAGATTCACTATTTTAAGA]
[+] EMBL CNS08XLU [ ATT CCCACCCAAAAGATAAGCGAGTTGTTACGCATCCCACTTGTACGCCAACTACATCGACATGTAGCGTGGTTACGGTGTTTTGTGCTGTTATATTTTGTTGTTTTTTCTCACAATTGTGCCTAGACCAGAAAAGCACAAGCTAAGCTTGTATTTATTTACCTTCTAACAACATCCCAAGTGCATTTATCGCTTCACTATTACCTCACACCATCAACGTGGCTGGAAGATGGAAGAAACCACGCAAAACTTTTCGAAAAGCAGACAACAGAAGCGAAAGCTGCCAGCCCACGGCTACCCGTTGGAGCATCCGTTCAACAAGGATGGATACCGGTACATACTGGCAGAACCCGATCCGCACGCACCGTTCCGGCAAGAGTTTGACGAAAGCGCTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGTACTGTCGCCGAACGCGGTGCTGATCGCATTGCACGATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCGACTGTCGATAACGGGCGAGAAGGGTTACTGCATGGCACGGGCTTCTCATTACGTTACCAAAGGATGCTGGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCGTCTGGGATGGGGACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGCGGTCGCGAAAGGGCACaa ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9280#0 -------------------------------------------TACGCATCACACTTGTA 17
consensus_9280#1 ------------------------------------------------------------
consensus_9280#2 ACTGGAGTTGCTATTATTCCCACCCAAAAGATAAGCGAGTTGTTACGCATCCCACTTGTA 60
consensus_9280#0 CGCCAACTACATCGACATGTAGCGTGGTTACGGTGTTTTGTGCTGTTATATTTTGTTGTT 77
consensus_9280#1 -------------TCTCCCTAGCGTGGTTA-GGTGTTTTGTGCTGTTATATTTTGTTGTT 46
consensus_9280#2 CGCCAACTACATCGACATGTAGCGTGGTTACGGTGTTTTGTGCTGTTATATTTTGTTGTT 120
*********** *****************************
consensus_9280#0 TTTTCTCACAATTGTGCCTAGACCAGAAAAGACAAGCTAAGCTTGTATTTATTTACCTTC 137
consensus_9280#1 TTTTCTCACAATTGTGCCTAGACCAGAAAAGACAAGCTAAGCTTGTATTTATTTACCTTC 106
consensus_9280#2 TTTTCTCACAATTGTGCCTAGACCAGAAAAGACAAGCTAAGCTTGTATTTATTTACCTTC 180
************************************************************
consensus_9280#0 TAACAACATCCCAAGTGCATTTATCGCTTCACTATTACCTCACACCATCAACGTGGCTGG 197
consensus_9280#1 TAACAACATCCCAAGTGCATTTATCGCTTCACTATTACCTCACACCATCAACGTGGCTGG 166
consensus_9280#2 TAACAACATCCCAAGTGCATTTATCGCTTCACTATTACCTCACACCATCAACGTGGCTGG 240
************************************************************
consensus_9280#0 AAGATGGAAGAAACCACGCAAAACTTTTCGAAAAGCAGACAACAGAAGCGAAAGCTGCCC 257
consensus_9280#1 AAGATGGAAGAAACCACGCAAAACTTTTCGAAAAGCAGACAACAGAAGCGAAAGCTGCCC 226
consensus_9280#2 AAGATGGAAGAAACCACGCAAAACTTTTCGAAAAGCAGACAACAGAAGCGAAAGCTGCC- 299
***********************************************************
consensus_9280#0 AACAGTGAGCAAAGCGGAGCCTTGGAAAGAAGAGCCGCCTCGGCACGGATGTCGGTGCGC 317
consensus_9280#1 AACAGTGAGCAAAGCGGAGCCTTGGAAAGAAGAGCCGCCTCGGCACGGATGTCGGTGCGC 286
consensus_9280#2 ------------------------------------------------------------
consensus_9280#0 TGGTGAAGCTGCCAGCCCACGGCTACCCGTTGGAGCATCCGTTCAACAAGGATGGATACC 377
consensus_9280#1 TGGTGAAGCTGCCAGCCCACGGCTACCCGTTGGAGCATCCGTTCAACAAGGATGGATACC 346
consensus_9280#2 -------------AGCCCACGGCTACCCGTTGGAGCATCCGTTCAACAAGGATGGATACC 346
***********************************************
consensus_9280#0 GATACATACTGGCAGAACCCGATCCTCACGCACCGTTCCGGCAAGAGTTTGACGAAAGCG 437
consensus_9280#1 GGTACATACTGGCAGAACCCGATCCGCACGCACCGTTCCTGCAAGAGTTTGACGAAAGCG 406
consensus_9280#2 GGTACATACTGGCAGAACCCGATCCGCACGCACCGTTCCGGCAAGAGTTTGACGAAAGCG 406
* *********************** ************* ********************
consensus_9280#0 CTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGTGTTGTCGCCGAACGCTG 497
consensus_9280#1 CTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGTACTGTCGCCGAACGCGG 466
consensus_9280#2 CTGACTGGGCAGGCAAACCGATACCGGGCTGGCTGTATCGAGTACTGTCGCCGAACGCGG 466
******************************************* ************* *
consensus_9280#0 TGCTGATCGCATTGCACGATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCGACTGTCGA 557
consensus_9280#1 TGCTGATCGCATTGCACGATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCGACTGTCGA 526
consensus_9280#2 TGCTGATCGCATTGCACGATCGTGCTCCCCAGCTAAAGGTATCCGAGGATCGACTGTCGA 526
************************************************************
consensus_9280#0 TAACGGGCGAGAAGGGTTATTGCATGGCACGGGCTTCTCATTATGTCACCAAAGGATGCT 617
consensus_9280#1 TAACGGGCGAGAAGGGTTACTGCATGGCAC------------------------------ 556
consensus_9280#2 TAACGGGCGAGAAGGGTTACTGCATGGCACGGGCTTCTCATTACGTTACCAAAGGATGCT 586
******************* **********
consensus_9280#0 GGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCGTCTGGGATGGG 677
consensus_9280#1 ------------------------------------------------------------
consensus_9280#2 GGTACTGGGAAGCTACCGTGGAGGATATGCCCGATGGTTCGGCCTGCCGTCTGGGATGGG 646
consensus_9280#0 GACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGC 737
consensus_9280#1 ---AGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGC 613
consensus_9280#2 GACAGGAGTACGCCAATCTGCAGGCACCACTCGGTTACGATAAGTTCGGATATTCGTGGC 706
*********************************************************
consensus_9280#0 GGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAACATTACAGTGCGGGGTATG 797
consensus_9280#1 GGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAGCATTACAGCGCGGGGTATG 673
consensus_9280#2 GGTCGCGAAAGGGCACCAAATTCCACGAATCGCACGGCAAGCATTACAGCGCGGGGTATG 766
**************************************** ******** **********
consensus_9280#0 GCGAGGGGGACACGCTCGGATTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGG 857
consensus_9280#1 GCGAGGGGGACACGCTCGGCTTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGG 733
consensus_9280#2 GCGAGGGGGACACGCTCGGCTTTCTGATCACACTGCCGAGCGATAATCAGGCAAACCAGG 826
******************* ****************************************
consensus_9280#0 CATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCACCTGTATTACGAGG 917
consensus_9280#1 CATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCATCTGTATTACGAGG 793
consensus_9280#2 CATCGAACACGTTCAAGGACCGGCCGCTGGTAAAGTTCAAAAGCCATCTGTATTACGAGG 886
********************************************** *************
consensus_9280#0 ACAAGGACCGTGTGAATGAAACGCTGAAGGCGCTGAAAGTGCAGCCGGGCAGTAAGATTC 977
consensus_9280#1 ACAAGGACCGTGTGAATGAAACGCTGAAGGCGCTGAAAGTGCAGCCGGGCAGTAAGATTC 853
consensus_9280#2 ACAAGGGCCGTGTGAATGAAACGCTGAAGG-GCTGAAAGTGCAGCCGGGCAGTAAGATTC 945
****** *********************** *****************************
consensus_9280#0 ACTATTTTAAGAACGGCGTCTGTCAGGGGGAGGCATTTGTGGACGTGTACAAAGGTGCCT 1037
consensus_9280#1 ACTATTTTAAGAACGGCGTCTGTCAGGGGGAGGCATTTGTGGACGTGTACAAAGGTGCCT 913
consensus_9280#2 ACTATTTTAAGA------------------------------------------------ 957
************
consensus_9280#0 ACTATCCGGCAATATCGTTGCACAAAAACGTAACGATCAGTGTGAATTTTGGACCGAAAT 1097
consensus_9280#1 ACTATCCGGCAATATCGTTGCACAAAAACGTAACGATCAGTGTGAATTTTGGACCGAAAT 973
consensus_9280#2 ------------------------------------------------------------
consensus_9280#0 TTAAGCACCCAGAGGTGCTGAAAGAGTTCAAAGCCCAGTCGATGCACGAACGAGTGGAAG 1157
consensus_9280#1 TTAAGCACCCAGAGGTGCTGAAAGAGTTCAAAGCCCAGTCGATGCACGAACGAGTGGAAG 1033
consensus_9280#2 ------------------------------------------------------------
consensus_9280#0 AAATGATCTGCGAGCAAACCATGGCCGACATGATGTACTTTACGGAAAATGATGGAAAGC 1217
consensus_9280#1 AAATGATCTGCGAGCAAACCATGGCCGACATGATGTACTTTACGGAAAATGATGGAAAGC 1093
consensus_9280#2 ------------------------------------------------------------
consensus_9280#0 TTCGACTCGACACCTACAGCATCTAAATGGCGATCCTGTTGTTAGGAGTGGAACGGAATA 1277
consensus_9280#1 TTCGACTCGACACCTACAGCATCTAAATGGCGATCCTGTTGTTAGGAGTGGAACGGAATA 1153
consensus_9280#2 ------------------------------------------------------------
consensus_9280#0 AACACTCAGAAGATGCTACAAACAATCATTTGTAACATTGCCCC-ATAA------ 1325
consensus_9280#1 AACACTCAGAAGATGCTACAAACAATCATTTGTAACATTGCCGAGATAAAAAAAA 1208
consensus_9280#2 -------------------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||