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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9296#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1481 fasta sequence
[CGAGGCCANGAATCCGCACGAGTGTACGCAAGTACATATCCAAGCACGGCAAAAGATCATATTATTAATCACATTAAATCATATTCAAAAGCTACAGCTTTGGAAGGTCTAAAGCTCCGGTCCGTGGGCTAGTAGGCTANGGCAAGAGGCCGAGAAGGCTGTTGGAACGGCTTGGGGTTAAATCGAGTACTCGAGCAGNAAGTAGGGAAACCGGAAAAGAGGCCTAANAGCCCGGGTACTAAGCTCGCCGTTTGGTGNAGCGTACGAGAGGAAGAGCAGTAGATGNCGAATGCAGGGTTCACGCGAACGGGGCNNAGGGNTGCACATGCACCTCTTANTGCAGTCGCGACNGCGAATTGCACTTANCGCCNCTCTGTGGACACCTGNCAACGGGATCACAGAACACAAAGGGNGTTGCCCACCAAAAGTTTTCGGGGGGTACGTGGCNNCCCGAGGAAAAGNGATCTGCCACAGTAAAGCNCCCAACGNGTTGGGNGNCGGGNCNCGCGAGGAAGGGGTAAANAGCCCAAGGGCAAAGGTGAGGCACACGAGAACGTGTNGAAGTTACAGANCCGGGGGGGTANATACACATGTGCGANNAANGNNCNGCCATAGGGTATNTTACGCNAAAGNGCCACAATGCNCCTGNNANGAAGGGGGGCCNAACGGGATANGACNGGGAGGGGNTTGGACGCNGAGNCNTGGGGGAGGTGCGCGAGACNCACGGGTANTNGTAGCGTGAGCGACTNGTATAGGCCCACGAGGTGAGGAGCCCAAGGCAGCNGACCGGCNAGGCGANAACAGGGCGGGCGAGGGACGCNCGGCAGGANTANACCAGAATGCNANGGAAAGGTGCNGGGGCNAGACATANNGGACGAGCATGAAGCGNGCCNGAGCGGANGNGCCNGNCAAGCACNGGNNGCGGCAAANNNGCCNCTCGACGGAGNNNACACCACGCGGNNCNGGGNGANGAGTGGGGGGAACGGCGNGANAGCNACAGCAGGNCGNGGGGTAGCGGGTGCGNNGAGTGCACACAACAGAGNNGTGTGGCTCACGGAGATCGANGGNNGCNGNCGGGGACGGGGCNNCGACNCAGGGGGNAAGTGCGCNNAGCACGGNGCNNCGNCGGNGAANAGGCGGAGCGAGCNNGNGNGGCGTGAGGTACNGAGAGANNNGCATGNGGAANAGCANCGGNGCGCACGACCGATAGAGAGCAGNCNNCNGAGCAAGNCACTGCCGACNACGACCGGCGCGAGNCAGAGGCACANGANAGAGGGNNANNCGCCAGANGAANGGAANNATGGGCGCNACGCCNCGNNACCGCGAACACCNGNCNGCNNCCACNCNGANAGCANNNACGGNACANAGNCNNCNCGNAAGNCAGCGCGAGGNGGGNGNCGNTCGAGCGAAGCTANGAGACAGAGNGAGCANCGAGNCCNAACGCCGNGGACCGGGCGGCNAAACAGCAGNCNGTAGCCGGC]
[+] EMBL BX469693 [CGAGGCCANGAATCCGCACGAGTGTACGCAAGTACATATCCAAGCACGGCAAAAGATCATATTATTAATCACATTAAATCATATTCAAAAGCTACAGCTTTGGAAGGTCTAAAGCTCCGGTCCGTGGGCTAGTAGGCTANGGCAAGAGGCCGAGAAGGCTGTTGGAACGGCTTGGGGTTAAATCGAGTACTCGAGCAGNAAGTAGGGAAACCGGAAAAGAGGCCTAANAGCCCGGGTACTAAGCTCGCCGTTTGGTGNAGCGTACGAGAGGAAGAGCAGTAGATGNCGAATGCAGGGTTCACGCGAACGGGGCNNAGGGNTGCACATGCACCTCTTANTGCAGTCGCGACNGCGAATTGCACTTANCGCCNCTCTGTGGACACCTGNCAACGGGATCACAGAACACAAAGGGNGTTGCCCACCAAAAGTTTTCGGGGGGTACGTGGCNNCCCGAGGAAAAGNGATCTGCCACAGTAAAGCNCCCAACGNGTTGGGNGNCGGGNCNCGCGAGGAAGGGGTAAANAGCCCAAGGGCAAAGGTGAGGCACACGAGAACGTGTNGAAGTTACAGANCCGGGGGGGTANATACACATGTGCGANNAANGNNCNGCCATAGGGTATNTTACGCNAAAGNGCCACAATGCNCCTGNNANGAAGGGGGGCCNAACGGGATANGACNGGGAGGGGNTTGGACGCNGAGNCNTGGGGGAGGTGCGCGAGACNCACGGGTANTNGTAGCGTGAGCGACTNGTATAGGCCCACGAGGTGAGGAGCCCAAGGCAGCNGACCGGCNAGGCGANAACAGGGCGGGCGAGGGACGCNCGGCAGGANTANACCAGAATGCNANGGAAAGGTGCNGGGGCNAGACATANNGGACGAGCATGAAGCGNGCCNGAGCGGANGNGCCNGNCAAGCACNGGNNGCGGCAAANNNGCCNCTCGACGGAGNNNACACCACGCGGNNCNGGGNGANGAGTGGGGGGAACGGCGNGANAGCNACAGCAGGNCGNGGGGTAGCGGGTGCGNNGAGTGCACACAACAGAGNNGTGTGGCTCACGGAGATCGANGGNNGCNGNCGGGGACGGGGCNNCGACNCAGGGGGNAAGTGCGCNNAGCACGGNGCNNCGNCGGNGAANAGGCGGAGCGAGCNNGNGNGGCGTGAGGTACNGAGAGANNNGCATGNGGAANAGCANCGGNGCGCACGACCGATAGAGAGCAGNCNNCNGAGCAAGNCACTGCCGACNACGACCGGCGCGAGNCAGAGGCACANGANAGAGGGNNANNCGCCAGANGAANGGAANNATGGGCGCNACGCCNCGNNACCGCGAACACCNGNCNGCNNCCACNCNGANAGCANNNACGGNACANAGNCNNCNCGNAAGNCAGCGCGAGGNGGGNGNCGNTCGAGCGAAGCTANGAGACAGAGNGAGCANCGAGNCCNAACGCCGNGGACCGGGCGGCNAAACAGCAGNCNGTAGCCGGC]
consensusID : consensus_9296#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1188 fasta sequence
[TTTTTTGTTTTTTTCAGTTATGCGGTTATACTTAAC-----TTTATAGTTAGGAGCACTGTTACGATTATCACATGTTGCCAGCATCATCAAAATAGTCGCCCTTTCCTTTGCGACCCTTTCGCCGGCGCTCCTTCTTCTTGCCTTTGGTATAATTTGGATCAACGTTGTTCAACTTCTTGTGTTTCTTCTTTTGCTTCCCATTCTTGTCCGGCTTCGGTTTGAAGATCATGCGTGGTATGCCCAGATCGTAGTAGGTTAGCCGTTGCAGCTCATTCGCCTTACACCGTTGCTCATATTCCTTCCAAAGCGTCTGATAGTCGCCGTGGTCGTACGCGGTAAACAGGTACCGTATCGCTTCGTCGATCTTGTTCCGCCGTTCGAGTGGCAATTCCTGCTTCCACGGATCGGCGTTCATGCACAGGTCCATCTCATGGCGCAGATAATTCAGGTGCGTACGGCCCTCGCGCAACCCGTACACGCCGAGCAGCAGTGTGTTGAGCTGACGGCGTAAAGCTTCCCGCGCCTTGCGCTGACTGCTGTCGGTCGTCTCATATTCGGCCAGCACACAGCGGATGCTCTTCTTTTCCCCTACCAGACCGCGC-AGATATTTGGCCATGTACAGCACCATTCGGTTG-GAAAAGCGGGGTCCGGTTATGCTGTAGTATTTCTCGTTGCCAGGATCATCCACTGGAGGTAGGTGGCGTGATGATTGGGGCTGCTGCTGTCGTTTGGCTGGTACGAGGTCCTGTGATGTTTGGGGCTGCTGCTGCCGTTGGTTTGGTTTGCATTCCCGCGATGAATGGGGCTGCTGTTCTTGATGGAATGGTATGAAATCCGGCGAGCCGTGGGACTGATGTTGCTTCGGTCGTTGTAATGGTTTGCAGTCCCGTGATGAATGGGGCTGCTGTTCTTGTTGCAATGGTATGAAATCCGGCGACGAATGGGACTGTTGTCGTCGTTCAAATGGTATGAAATCCTCCGATGCATAAGAGTCATTCACCTGCCGTGCTGAACTCATCGCTTATGTTTCTTCTATTAACAAGCACTAGTACC--GGTTTAGGCTCTTTCGGTTCCTATTCTGTCGATATCGATTAACCAAGCGTTCCAACAGCTTCTCTGCCTTTGCTAGCTACTAGCCCACGGACGGAGCTTTAGACCTTCCCAAAGCTGTAGCTTTTGAATATGATTTAA]
[+] EMBL CNS08CT3 [TTTTTTGTTTTTTTCAGTTATGCGGTTATATTTAAC TTTATAGTTATGAGCACTATTACGATTATCACATGTTGCCTGCATCATCAGAATAGTCGCCCTTTCCTTTACGAACCTTTCTTCGGCGCTCCTTCTTCTTGCCTTTGGTATAATTTGGATCAACATTGTTCAACTTCTTGTTTTTCTTCTTTTGCTTCCCATTCTTGTCCGGCTTCGGTTTGAAGATCATGCGTGGTATGCCCAGATCGTAGTAGGTTAGCCGTTGCAGCTCATTCGCCCTACACCGTTGCTCGTATTCCTTCCAAAGCGTCGGATAGTCGCCGTGGTCGTACGCGGTAAACAGGTACCGTATCGCTTCGTCGATCTTGTTCCGCCGTTCGGGTGGCAATTCCTGCTTCCAGGGATCGGCGTTCATGCACAGGTCCATCTCATGGCGCAGATAGTTCAGGTGCGTACGGCCCTCGCGCAACCCGTACACGCCGAGCAGTAGCGTGTTGAGCTGACGGCGTAAAGCTTCCCGCGCCTTTCGCTGACTGCTGTGGGTCGTCAGAAATTCTTCCAGCACACAGCGGATGCTCTTCTTTTCCCCTACCAGACCGCGCGAGATATTTGGCCATGTACAGCACCATTCGGTTG GAAAAGCGGGGCCCGGTTATGCTGTAGTATTTCTCGTTGCCAGGATCATCCACTGGAGGTAGGTGGCGTGATGATTGGGGCTGCTGCTGTCGTTTGGCTGGTACGAGGTCCTGTGATGTTTGGGGCTGCTGCTGCCGTTTGTTTGGTTTGCATTCCCGCGATGAATGGGGCTGCTGTTCTTGATGGAATGGTATGAAATCCGGCGAGCCGTGGGACTGATGTTGCTTCGGTCGTTGTAATGGTTCGATGTTCTGCGATGAATGAGGTTGCTGTTCTGGCTGGAGTGGTATGAAATCCGGCGACGAATGGGACTGTTGTCGTCGTTCAAAAGGTATGAAATCCTCCGATGC ]
[+] EMBL CNS08Z25 [ TATATTTAAC TTTATAGTTATGAGCACTATTACGATTATCACATGTTGCCTGCATCATCAGAATAGTCGCCCTTTCCTTTACGAACCTTTCTTCGGCGCTCCTTCTTCTTGCCTTTGGTATAATTTGGATCAACATTGTTCAACTTCTTGTTTTTCTTCTTTTGCTTCCCATTCTTGTCCGGCTTCGGTTTGAAGATCATGCGTGGTATGCCCAGATCGTAGTAGGTTAGCCGTTGCAGCTCATTCGCCCTACACCGTTGCTCGTATTCCTTCCAAAGCGTCGGAT ]
[+] EMBL CNS08GC1 [ ATACTTAACATATATTTATAGTTAGGAGCACTGTTACGATTATCACATGTTGCCAGCATCATCAAAATAGTCGCCCTTTCCTTTGCGACCCTTTCGCCGGCGCTCCTTCTTCTTGCCTTTGGTATAATTTGGATCAACGTTGTTCAACTTCTTGTGTTTCTTCTTTTGCTTCCCATTCTTGTCCGGCTTCGGTTTGAAGATCATGCGTGGTATGCCCAGATCGTAGTAGGTTAGCCGTTGCAGCTCATTCGCCTTACACCGTTGCTCATATTCCTTCCAAAGCGTCTGATAGTCGCCGTGGTCGTACGCGGTAAACAGGTACCGTATCGCTTCGTCGATCTTGTCCCGCCGTTCGAGTGGCAATTCCTGCTTCCACGGATCGGCGTTCATGCACAGGTCCATCTCATGGCGCAGATAATTCAGGTGCGTACGGCCCTCGCGCAACCCGTACACGCCGAGCAGCAGTTTGTTGAGCTGACGGCGTAAAGCTTCCCGCGCCTTGCGCTGACTGCTGTCGGTCGTCTCATATTCGGCCAGCACACAGCGGATGCTCTTCTTTTCCCCTACCAGACCGCGC AGATATTTGGCCATGTACAGCACCATTCGGTTGTTTTTAGCGGGGTCCGGTTATGCTGTAGTATTTCTCGTTGCCAGGATCATCCACTGGAGGTAGGTGGCGTGATGATTGGGGCTGCTGCTGTCGTTTGGCTGGTACGAGGTCCTGTTATGTTTGGGGCTGCTGCTGCCGTTGGTTTGGTTTGCATTCCCGCGATGAATGGGGCTGCTGTTCTTGATGGAATGGTATGAAATCCGGCGAGCCGTGGGACTAATGTTGCTTCGGTCGTTGTAATGGTTTGCAGTCCCGTGATGAATGGGGCTGCTGTACTTGTAGCAATGGTATGAAATCCGGCGACGAATGGGA ]
[+] EMBL CNS08IUA [ taACATATA TTTATAGTTAGGAGCACTGTTACGATTATCACATGTTGCCAGCATCATCAAAATAGTCGCCCTTTCCTTTGCGACCCTTTCGCCGGCGCTCCTTCTTCTTGCCTTTGGTATAATTTGGATCAACGTTGTTCAACTTCTTGTGTTTCTTCTTTTGCTTCCCATTCTTGTCCGGCTTCGGTTTGAAGATCATGCGTGGTATGCCCAGATCGTAGTAGGTTAGCCGTTGCAGCTCATTCGCCTTACACCGTTGCTCATATTCCTTCCAAAGCGTCTGATAGTCGCCGTGGTCGTACGCGGTAAACAGGTACCGTATCGCTTCGTCGATCTTGTTCCGCCGTTCGAGTGGCAATTCCTGCTTCCACGGATCGGCGTTCATGCACAGGTCCATCTCATGGCGCAGATAATTCAGGTGCGTACGGCCCTCGCGCAACCCGTACACGCCGAGCAGCAGTTTGTTGAGCTGACGGCGTAAAGCTTCCCGCGCCTTGCGCTGACTGCTGTCGGTCGTCTCATATTCGGCCAGCACACAGCGGATGCTCTTCTTTTCCCCTACCAGACCGCGC AGATATTTGGCCATGTACAGCACCATTCGGTTG GAAAAGCGGGGTCCGGTTATGCTGTAGTATTTCTCGTTGCCAGGATCATCCACTGGAGGTAGGTGGCGTGATGATTGGGGCTGCTGCTGTCGTTTGGCTGGTACGAGGTCCTGTGATGTTTGGGGCTGCTGCTGCCGTTGGTTTGGTTTGCATTCCCGCGATGAATGGGGCTGCTGTCCTTGATGGAATGGTATGAAATCCGGCGAGCCGTGGGACTGATGTCGCTTCGGTCGTTGTAATGGTTTGCAGTCCCGTGATGAATGGGGCTGCTGTTCTTGTTGCAATGGTATGAAATCCGGCGACGAATGGGACTTTTGTGGTCGTTCAAATGGTATGAAATCCTCCGATGCATA ]
[+] EMBL CNS08I9A [ catata TTTATAGTTAGGAGCACTGTTACGATTATCACATGTTGCCAGCATCATCAAAATAGTCGCCCTTTCCTTCGCGACCCTTTCGCCGGCGCTCCTTCTTCTTGCCTTTGGTATAATTTGGATCAACGTTGTTCAACTTCTTGTGTTTCTTCTTTTGCTTCCCATTCTTGTCCGGCTTCGGTTTGAAGATCATGCGTGGTATGCCCAGATCGTAGTAGGTTAGCCGTTGCAGCTCATTCGCCTTACACCGTTGCTCATATTCCTTCCAAAGCGTCTGATAGTCGCCGTGGTCGTACGCGGTAAACAGGTACCGTATCGCTTCGTCGATCTTGTTCCGCCGTTCGAGTGGCAATTCCTGCTTCCACGGATCGGCAGACATGCACAGGTCCATCTCATGGCGCAGATAATTCAGGTGCGTACGGCCCTCGCGCAACCCGTACACGCCGAGCAGCAGTTTGTTGAGCTGACGGCGTAAAGCTTCCCGCGCCTTGCGCTGACTGCTGTCGGTCGTCTCATATTCGGCCAGCACACAGCGGATGCTCTTCTTTTCCCCTACCAGACCGCGC AGATATTTGGCCATGTACAGCACCATTCGGTTG GAAAAGCGGGGTCCGGTTATGCTGTAGTATTTCTCGTTGCCAGGATCATCCACTGGAGGTAGGTGGCGTGATGATTGGGGCTGCTGCTGTCGAAAGGCTGGTACGAGGTCCTGTTATGTTTGGGGCTGCTGCTGCCGTTGGTTTGGTTTGCATTCCCGCGATGAATGGGGCTGCTGTTCTTGATGGAATGGTATGAAATCCGGCGAGCCGTGGGACTTATGTTGCTTCGGTCGTTGTAATGGTTTGCAGTCCCGTTATGAATGGGGCTGCTGTTCTTGTTGCAATGGTATGAAATCCGGCGACGAATGGGACTTTTGTCGTCGTTCAAATGGTATGAAATCCTCCGATGCATAAGAGT ]
[-] EMBL CNS08IU9 [ CTTGTCCGGCTTCGGTTTGAAGATCATGCGTGGTATGCCCAGATCGTAGTAGGTTAGCCGTTGCAGCTCATTCGCCTTACACCGTTGCTCATATTCCTTCCAAAGCGTCTGATAGTCGCCGTGGTCGTACGCGGTAAACAGGTACCGTATCGCTTCGTCGATCTTGTTCCGCCGTTCGAGTGGCAATTCCTGCTTCCACGGATCGGCGTTCATGCACAGGTCCATCTCATGGCGCAGATAATTCAGGTGCGTACGGCCCTCGCGCAACCCGTACACGCCGAGCAGCAGTGTGTTGAGCTGACGGCGTAAAGCTTCCCGCGCCTTGCGCTGACTGCTGTCGGTCGTCTCATATTCGGCCAGCACACAGCGGATGCTCTTCTTTTCCCCTACCAGACCGCGC AGATATTTGGCCATGTACAGCACCATTCGGTTG GAAAAGCGGGGTCCGGTTATGCTGTAGTATTTCTCGTTGCCAGGATCATCCACTGGAGGTAGGTGGCGTGATGATTGGGGCTGCTGCTGTCGTTTGGCTGGTACGAGGTCCTGTGATGTTTGGGGCTGCTGCTGCCGTTGGTTTGGTTTGCATTCCCGCGATGAATGGGGCTGCTGTTCTTGATGGAATGGTATGAAATCCGGCGAGCCGTGGGACTGATGTTGCTTCGGTCGTTGTAATGGTTTGCAGTCCCGTGATGAATGGGGCTGCTGTTCTTGTTGCAATGGTATGAAATCCGGCGACGAATGGGACTGTTGTCGTCGTTCAAATGGTATGAAATCCTCCGATGCATAAGAGTCATTCACCTGCCGTGCTGAACTCATCGCTTATGTTTCTTCTATTAACAAGCACTAGTACC GGTTTAGGCTCTTTCGGTTCCTATTCTGTCGATATCGATTAACCAAGCGTTCCAACAGCTTCTCTGCCTTTGCTAGCTACTAGCCCA ]
[-] EMBL CNS08I99 [ TCGGTTTGAAGATCATGCGTGGTATGCCCAGATCGTAGTAGGTTAGCCGTTGCAGCTCATTCGCCTTACACCGTTGCTCATATTCCTTCCAAAGCGTCTGATAGTCGCCGTGGTCGTACGCGGTAAACAGGTACCGTATCGCTTCGTCGATCTTGTTCCGCCGTTCGAGTGGCAATTCCTGCTTCCACGGATCGGCGTTCATGCACAGGTCCATCTCATGGCGCAGATAATTCAGGTGCGTACGGCCCTCGCGCAACCCGTACACGCCGAGTTTTAGTGTGTTGAGCTGACGGCGTAAAGCTTCCCGCGCCTTGCGCTGACTGCTGTCGGTCGTCTCATATTCGGCCAGCACACAGCGGATGCTCTTCTTTTCCCCTACCAGACCGCGC AGATATTTGGCCATGTACAGCACCATTCGGTTG GAAAAGCGGGGTCCGGTTATGCTGTAGTATTTCTCGTTGCCAGGATCATCCACTGGAGGTAGGTGGCGTGATGATTGGGGCTGCTGCTGTCGTTTGGCTGGTACGAGGTCCTGTGATGTTTGGGGCTGCTGCTGCCGTTGGTTTGGTTTGCATTCCCGCGATGAATGGGGTTACTGTTCTTGATGGAATGGTATGAAATCCGGCGAGCCGTGGGACTGATGTTGCTTCGGTCGTTGTAATGGTTTGCAGTCCCGTGATGAATGGGGCTGCTGTTCTTGTTGCAATGGTATGAAATCCGGCGACGAATGGGACTGTTGTCGTCGTTCAAATGGTATGAAATCCTCCGATGCATAAGAGTCATTCACCTGCCGTGCTGAACTCATCGCTTATGTTTCTTCTATTAACAAGCACTAGTACC GGTTTAGGCTCTTTCGGTCCCTATTCTGTCGATATCGATTCACCAAGCGTTCCAACAGCTTCTCTGCCTTTGCTAGCTACTAGCCCACGGACGGAGCTTTAGACCTTCCCAAAGCTGTAGCTTTTGAATATGATTTAA]
[-] EMBL CNS08CT2 [ GTTAGCCGTTGCAGCTCATTCGCCCTACACCGTTGCTCGTATTCCTTCCAAAGCGTCGGATAGTCGCCGTGGTCGTACGCGGTAAACAGGTACCGTATCGCTTCGTCGATCTTGTTCCGCCGTTCGGGTGGCAATTCCTGCTTCCAGGGATCGGCGTTCATGCACAGGTCCATCTCATGGCGCAGATAGTTCAGGTGCGTACGGCCCTCGCGCAACCCGTACACGCCGAGCAGTAGCGTGTTGAGCTGACGGCGTAAAGCTTCCCGCGCCTTTCGCTGACTGCTGTCGGTCGTCAGATATTCTTCCAGCACACAGCGGATGCTCTTCTTTTCCCCTACCAGACCGCGC AGATATTTGGCCATGTACAGCACCATTCGGTTG GAAAAGCGGGGCCCGGTTATGCTGTAGTATTTCTCG TGCCAGGATCATCCACTGGAGGTAGGTGGCGTGATGATTGGGGCTGCTGCTGTCGTTTGGCTGGTACGAGGTCCTGTGATGTTTGGGGCTGCTGCTGCCGTTTGTTTGGTTTGCATTCCCGCGATGAATGGGGCTGCTGTTCTTGATGGAATGGTATGAAATCCGGCGAGCCGTGGGACTGATGTTGCTTCGGTCGTTGTAATGGTTCGATGTTCTGCGATGAATGAGGTTGCTGTTCTGGCTGGAGTGGTATGAAATCCGGCGACGAATGGGACTGTTGTCGTCGTTCAAAAGGTATGAAATCCTCCGATGCATAAGAGTCATGCACCTGCCGTGCTGAACTCATCGCTTATGTTTCTTCTATTAACAAGCACTAGTACCGGGGTTCAGTCTCGTTCGGTTCCTATTCTGTCGATATCGATTAACCAAGCGTTCCAACAGCTTATCTGCCTTTGCTAGCCACTAGCCCA ]
[-] EMBL CNS08GC0 [ TAGTTTCCGTTGTCGTACGCGGTAAACAGGTACCGTATCGCTTCGTCGATCTTGTTCCGCCGTTCGAGTGGCAATTCCTGCTTCCACGGATCGGCGTTCATGCACAGGTCCATCTCATGGCGCAGATAATTCAGGTGCGTACGGCCCTCGCGCAACCCGTACACGCCGAGCAGCAGTGTGTTGAGCTGACGGCGTAAAGCTTCCCGCGCCTTGCGCTGACTGCTGTCGGTCGTCTCATATTCGGCCAGCACACAGCGGATGCTCTTATTTTCCCCTACCAGACCGCGC AGATATTTGGCCATGTACAGCACCATTCGGTTG GAAAAGCGGGGTCCGGTTATGCTGTAGTATTTCTCGTTGCCAGGATCATCCACTGGAGGTAGGTGGCGTGATGATTGGGGCTGCTGCTGTCGTTTGGCTGGTACGAGGTCCTGTGATGTTTGGGGCTGCTGCTGCCGTTGGTTTGGTTTGCATTCCCGCGATGAATGGGGCTGCTGTTCTTGATGGAATGGTATGAAATCCGGCGAGCCGTGGGACTGATGTTGCTTCGGTCGTTGTAATGGTTTGCAGTCCCGTGATGAATGGGGCTGCTGTTCTTGTTGCAATGGTATGAAATCCGGCGACGAATGGGACTGTTGTCGTCGTTCAAATGGTATGAAATCCTCCGATGCATAAGAGTCATTCACCTGCCGTGCTGAACTCATCGCTTATGTTTCTTCTATTAACAAGCACTAGTACC GGTTTAGGCTCTTTCGGTTCCTATTCTGTCGATATCGATTAACCAAGCGTTCCAACAGCTTCTCTGCCTTTGCTAGCTACTAGCCCACGGACGGAGCTTTAGACCTTCGCAA ]
[-] EMBL BX618665 [ CACGCCGAGCAGCAGTGTGTTGAGCTGACGGCGTAAAGCTTCCCGCGCCTTGCGCTGACTGCTGTCGGTCGTCTCATATTCGGCCAGCACACAGCGGATGCTCTTCTTTTCCCCTACCAGACCGCGC AGATATTTGGCCATGTACAGCACCATTCGGTTG GAAAAGCGGGGTCCGGTTATGCTGTAGTATTTCTCGTTGCCAGGATCATCCACTGGAGGTAGGTGGCGTGATGATTGGGGCTGCTGCTGTCGTTTGGCTGGTACGAGGTCCTGTGATGTTTGGGGCTGCTGCTGCCGTTGGTTTGGTTTGCATTCCCGCGATGAATGGGGCTGCTGTTCTTGATGGAATGGTATGAAATCCGGCGAGCCGTGGGACTGATGTTGCTTCGGTCGTTGTAATGGTTTGCAGTCCCGTGATGAATGGGGCTGCTGTTCTTGTTGCAATGGTATGAAATCCGGCGACGAATGGGACTGTTGTCGTCGTTCAAATGGTATGAAATCCTCCGATGCATAAGAGTCATTCACCTGCCGTGCTGAACTCATCGCTTATGTTTCTTCTATTAACAAGCACTAGTACC GGTTTAGGCTCTTTCGGTTCCTAT ]
[-] EMBL BM593334 [ CGAGCAGCAGTGTGTTGAGCTGACGGCGTAAAGCTTCCCGCGCCTTGCGCTGACTGCTGTCGGTCGTCTCATATTCGGCCAGCACACAGCGGATGCTCTTCTTTTCCCCTACCAGACCGCGC AGATATTTGGCCATGTACAGCACCATTCGGTTG GAAAAGCGGGGTCCGGTTATGCTGTAGTATTTCTCGTTGCCAGGATCATCCACTGGAGGTAGGTGGCGTGATGATTGGGGCTGCTGCTGTCGTTTGGCTGGTACGAGGTCCTGTGATGTTTGGGGCTGCTGCTGCCGTTGGTTTGGTTTGCATTCCCGCGATGAATGGGGCTGCTGTTCTTGATGGAATGGTATGAAATCCGGCGAGCCGTGGGACTGATGTTGCTTCGGTCGTTGTAATGGTTTGCAGTCCCGTGATGAATGGGGCTGCTGTTCTTGTTGCAATGGTATGAAATCCGGCGACGAATGGGACTGTTGTCGTCGTTCAAATGGTATGAAATCCTCCGATGCATAAGAGTCATTCACCTGCCGTGCTGAACTCATCGCTTATGTTTCTTCTATTAACAAGCACTAGTACC GGTTTAGGCTCTTTCGGTTCCTATTCTGTCGATATCGATTAACCAAGCGTTCCAACAGCTcgg ]
consensusID : consensus_9296#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 656 fasta sequence
[CCCAGGCATNGANTCGCCGGATTTCATACCATTCCATCAAGAACAGCAGCCCCATTCATCGCGGGAATGCAAACCAAACCAACGGCAGCAGCAGCCCCAAACATCACAGGACCTCGTACCAGCCAAACGACAGCAGCAGCCCCAATCATCACGCCACCTACCTCCAGTGGATGATCCTGGCAACGAGAAATACTACAGCATAACCGGACCCCGCTTTTCCAACCGAATGGTGCTGTACATGGCCAAATATCTGCGCGGTCTGGTAGGGGAAAAGAAGAGCATCCGCTGTGTGCTGGCCGAATATGAGACGACCGACAGCAGTCAGCGCAAGGCGCGGGAAGCTTTACGCCGTCAGCTCAACACACTGCTTGCTCGGCGTGTACGGGTTTGCGCGAGGGCCGTACGCACCTGAATTATCTGCGCCATGAGATGGACCTGTGCATGAACGCCGATCCGTGGAAGGCAGGAATTGCCACTCGAACGGTGGAACAAGATCGACGAAGCGATACGGTACCTTGTTATACCGCGTACGACCACCGGGACTATCAGACGCTTATGGAAGGAATATGAGCAACGGGTGTAAGGCCGAATGAGCTGAAACGGGCTAACCTAATAGATCTTGGGCATACCACGCATGATCTTCNAACCGCAANCGG]
[+] EMBL AL934630 [CCCAGGCATNGANTCGCCGGATTTCATACCATTCCATCAAGAACAGCAGCCCCATTCATCGCGGGAATGCAAACCAAACCAACGGCAGCAGCAGCCCCAAACATCACAGGACCTCGTACCAGCCAAACGACAGCAGCAGCCCCAATCATCACGCCACCTACCTCCAGTGGATGATCCTGGCAACGAGAAATACTACAGCATAACCGGACCCCGCTTTTCCAACCGAATGGTGCTGTACATGGCCAAATATCTGCGCGGTCTGGTAGGGGAAAAGAAGAGCATCCGCTGTGTGCTGGCCGAATATGAGACGACCGACAGCAGTCAGCGCAAGGCGCGGGAAGCTTTACGCCGTCAGCTCAACACACTGCTTGCTCGGCGTGTACGGGTTTGCGCGAGGGCCGTACGCACCTGAATTATCTGCGCCATGAGATGGACCTGTGCATGAACGCCGATCCGTGGAAGGCAGGAATTGCCACTCGAACGGTGGAACAAGATCGACGAAGCGATACGGTACCTTGTTATACCGCGTACGACCACCGGGACTATCAGACGCTTATGGAAGGAATATGAGCAACGGGTGTAAGGCCGAATGAGCTGAAACGGGCTAACCTAATAGATCTTGGGCATACCACGCATGATCTTCNAACCGCAANCGG]
consensusID : consensus_9296#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 563 fasta sequence
[TGGGCTAGTAGCTAGCAAAGGCAGATAAGCTGTTGGAACGCTTGGTTAATCGATATCGACAGAATAGGAACCGAACGAGACTGAACCCCGGTACTAGTGCTTGTTAATAGAAGAAACATAAGCGATGAGTTCAGCACGGCAGGTGCATGACTCTTATGCATCGGAGGATTTCATACCTTTTGAACGACGACAACAGTCCCATTCGTCGCCGGATTTCATACCACTCCAGCCAGAACAGCAACCTCATTCATCGCAGAACATCGAACCATTACAACGACCGAAGCAACATCAGTCCCACGGCTCGCCGGATTTCATACCATTCCATCAAGAACAGCAGCCCCATTCATCGCGGGAATGCAAACCAAACAAACGGCAGCAGCAGCCCCAAACATCACAGGACCTCGTACCAGCCAAACGACAGCGGCAGCCCCAATCATCACGCCACCTACCTACCAGCCAAACGACAGCAGCAGCCCCAATCATCACGCCACCTACCTCCAGTGGATGATCCTGGCAACGAGAAATACTACAGNATAACCGGGCCCCCGCTTTTCCAACCGAAT]
[+] EMBL CNS08Z24 [TGGGCTAGTAGCTAGCAAAGGCAGATAAGCTGTTGGAACGCTTGGTTAATCGATATCGACAGAATAGGAACCGAACGAGACTGAACCCCGGTACTAGTGCTTGTTAATAGAAGAAACATAAGCGATGAGTTCAGCACGGCAGGTGCATGACTCTTATGCATCGGAGGATTTCATACCTTTTGAACGACGACAACAGTCCCATTCGTCGCCGGATTTCATACCACTCCAGCCAGAACAGCAACCTCATTCATCGCAGAACATCGAACCATTACAACGACCGAAGCAACATCAGTCCCACGGCTCGCCGGATTTCATACCATTCCATCAAGAACAGCAGCCCCATTCATCGCGGGAATGCAAACCAAACAAACGGCAGCAGCAGCCCCAAACATCACAGGACCTCGTACCAGCCAAACGACAGCGGCAGCCCCAATCATCACGCCACCTACCT ]
[+] EMBL BX626464 [ CTAGCAAAGGCAGAGAAGCTGTTGGAACGCTTGGTTAATCGATATCGACAGAATAGGAACCGAAAGAGCCTAAA CCGGTACTAGTGCTTGTTAATAGAAGAAACATAAACGATGAGTTCAGCACGGCAGGTGTATGACTCTTATGCATCGGAGGATTTCATACCTTTTGAACGACGACAACAGTCCCATTCGTCGCCGGA TTCATACCACTCCAACAAGAACAGCAGCCCCATTCATCACGGGTCTGCAAACCATTACAACGACCGAAGCAACATCAGTCCCACGGCTCGCCGGATTTCATACCATTCCATCAAGAACAGCAGCCCCATTCATCGCGGGAATGCAAACCAAACCAACGGCAGCAGCAGCCCCAAACATCACAGGACCTCGTACCAGCCAAACGGCAGCAGCAGCCCCAAACATCACAGGACCT CGTACCAGCCAAACGACAGCAGCAGCCCCAATCATCACGCCACCTACCTCCAGTGGATGATCCTGGCAACGAGAAATACTACAGNATAACCGGGCCCCCGCTTTTCCAACCGAAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9296#2 ------------------------------------------------------------
consensus_9296#3 ------------------------------------------------------------
consensus_9296#0 CGAGGCCANGAATCCGCACGAGTGTACGCAAGTACATATCCAAGCACGGCAAAAGATCAT 60
consensus_9296#1 ------------------------------------------------------------
consensus_9296#2 ------------------------------------------------------------
consensus_9296#3 ------------------------------------------------------------
consensus_9296#0 ATTATTAATCACATTAAATCATATTCAAAAGCTACAGCTTTGGAAGGTCTAAAGCTCCGG 120
consensus_9296#1 ------------------------------------------------------------
consensus_9296#2 ------------------------------------------------------------
consensus_9296#3 ------------------------------------------------------------
consensus_9296#0 TCCGTGGGCTAGTAGGCTANGGCAAGAGGCCGAGAAGGCTGTTGGAACGGCTTGGGGTTA 180
consensus_9296#1 ------------------------------------------------------------
consensus_9296#2 ------------------------------------------------------------
consensus_9296#3 ------------------------------------------------------------
consensus_9296#0 AATCGAGTACTCGAGCAGNAAGTAGGGAAACCGGAAAAGAGGCCTAANAGCCCGGGTACT 240
consensus_9296#1 ------------------------------------------------------------
consensus_9296#2 ------------------------------------------------------------
consensus_9296#3 ------------------------------------------------------------
consensus_9296#0 AAGCTCGCCGTTTGGTGNAGCGTACGAGAGGAAGAGCAGTAGATGNCGAATGCAGGGTTC 300
consensus_9296#1 ------------------------------------------------------TTTTTT 6
consensus_9296#2 ------------------------------------------------------------
consensus_9296#3 ------------------------------------------------------------
consensus_9296#0 ACGCGAACGGGGCNNAGGGNTGCACATGCACCTCTTANTGCAGTCGCGACNGCGAATTGC 360
consensus_9296#1 GTTTTTTTCAGTTATGCGGTTATACTTAACTTTATAGTTAGGAGCACTGTTACGATTATC 66
consensus_9296#2 ------------------------------------------------------------
consensus_9296#3 ------------------------------------------------------------
consensus_9296#0 ACTTANCGCCN---CTCTGTGGACACCTGNCAACGGGATCACAGAACACAAAG-GGNGTT 416
consensus_9296#1 ACATGTTGCCAGCATCATCAAAATAGTCGCCCTTTCCTTTGCGACCCTTTCGCCGGCGCT 126
consensus_9296#2 ------------------------------------------------------------
consensus_9296#3 ------------------------------------------------------------
consensus_9296#0 GCCCACCAAAAGTTTTCGGGGGGTACGTGGCNNCCCGAGGAAAAGNGATCTGCCACAG-T 475
consensus_9296#1 CCTTCTTCTTGCCTTTGGTATAATTTGGATCAACGTTGTTCAACTTCTTGTGTTTCTTCT 186
consensus_9296#2 ------------------------------------------------------------
consensus_9296#3 ------------------------------------------------------------
consensus_9296#0 AAAGCNCCCAACGNGTTGGGNGNCGGGNCNCGCGAGGAAGGGGTAAANAGCCCAAGGGCA 535
consensus_9296#1 TTTGCTTCCCATTCTTGTCCGGCTTCGGTTTGAAGATCATGCGTGGTATGCCCA--GATC 244
consensus_9296#2 ------------------------------------------------------------
consensus_9296#3 ------------------------------------------------------------
consensus_9296#0 AAGGTGAGGCACACGAGAACGTGTNGAAGTTACAGANCCGGGGGGGTANATACACATGTG 595
consensus_9296#1 GTAGTAGGTTAGCCGTTGCAGCTCATTCGCCTTACACCGTTGCTCATATTCCTTCCAAAG 304
consensus_9296#2 ------------------------------------------------------------
consensus_9296#3 ------------------------------------------------------------
consensus_9296#0 CGANNAANGNNCNGCCATAGGGTATNTTACGCNAAAGNGCCACAATGCNCCTGNNANGAA 655
consensus_9296#1 CGTCTGATAGTCGCCGTGGTCGTACGCGGTAAACAGGTACCGTATCGCTTCGTCGATCTT 364
consensus_9296#2 ------------------------------------------------------------
consensus_9296#3 ------------------------------------------------------------
consensus_9296#0 GGGGGGCCNAACGGGATANGACNGGGAGGGGNTTGGACGCNGAGNCNTGGGGGAGGTGCG 715
consensus_9296#1 GTTCCGCCGTTCGAGTGGCAATTCCTGCTTCCACGGATCGGCGTTCATGCACAGGTCCAT 424
consensus_9296#2 -----------------------------CCCAGGCATNGANTCGCCGGATTTCATACC- 30
consensus_9296#3 ----------------------------------------------------------T- 1
consensus_9296#0 CGAGACNCACGGGTANTNGTAGCGTGAGCGACTNGTATAGGCCCACGAGGTGAGGAGCCC 775
consensus_9296#1 CTCATGGCGCAGATAATTCAGGTGCGTACGGCCCTCGCGCAACCCGTACACGCCGAGCAG 484
consensus_9296#2 ATTCCATCAAGAACAGCAGCCCCATTCATCGCGGG-AATGCAAACCAAACCA--A---CG 84
consensus_9296#3 GGGCTAGTAGCTAGCAAAGGCAGATAAGCTGTTGG-AACGCTTGGTTAATCG--ATATCG 58
consensus_9296#0 AAGGCAGCNGACCGGCNAGGCGANAACAGGGCGGGCGAGGGACGCNCGGCAG--GANTAN 833
consensus_9296#1 CAGTGTGTTGAGCTGACGGCGTAAAGCTTCCCGCGCCTTGCGCTGACTGCTGTCGGTCGT 544
* * *
consensus_9296#2 GCAGCAGCAGCCCCAAACATCACAGGACCTCG-TACCA--GCCAAACGACAGCAGCAGCC 141
consensus_9296#3 ACAGAATAGGAACCGAACGAGACTGAACCCCGGTACTAGTGCTTGTTAATAGAAGAAACA 118
consensus_9296#0 ACCAGAATGCNANGGAAAGGTGCNGGGGCNAGACATANNGGACGAGCATGAAGCGNGCCN 893
consensus_9296#1 CTCATATTCGGCCAGCACACAGCGGATGCTCTTCTTTTC-CCCTACCAGACCGCGCAGAT 603
* * * * * *
consensus_9296#2 CCAATCATCACGCCACCTACCTCCAGTGGATG-ATCCTG--GCAACGAGAA-ATACTACA 197
consensus_9296#3 TAAGCGATGAGTTCAGC-ACGGCAGGTGCATG-ACTCTTATGCATCGGAGG-ATTTCATA 175
consensus_9296#0 GAGCGGANGNGCCNGNCAAGCACNGGNNGCGGCAAANNNGCCNCTCGACGG-AGNNNACA 952
consensus_9296#1 ATTTGGCCATGTACAGCACCATTCGGTTGGAAAAGCGGGGTCCGGTTATGCTGTAGTATT 663
* * * *
consensus_9296#2 GCATA-ACCGGACCCCGCTTTTCCAACC-GAATGGTGCTGTA-CATGGCCAA--ATATCT 252
consensus_9296#3 CCTT---TTGAACGACGAC-----------AACAGTCCCATT-CGTCGCCGG--ATTTCA 218
consensus_9296#0 CCACGCGGNNCNGGGNGANGAGTGGGGG-GAACGGCGNGANAGCNACAGCAG--GNCGNG 1009
consensus_9296#1 TCTCGTTGCCAGGATCATCCACTGGAGGTAGGTGGCGTGATGATTGGGGCTGCTGCTGTC 723
* * *
consensus_9296#2 GCGCGG----TCTGGTAGG---GGAAAAGAAGAGCATCCGCTGTGTGCTGGCCGAAT--- 302
consensus_9296#3 TACCAC----TCCAGCCAG---A-ACAGCAACCTCATTCATCGCAGAACATCGAACC--- 267
consensus_9296#0 GGGTAGCGGGTGCGNNGAGTGCACACAACAGAGNNGTGTGGCTCACGGAGATCGANG--- 1066
consensus_9296#1 GTTTGGCTGGTACGAGGTCCTGTGATGTTTGGGGCTGCTGCTGCCGTTGGTTTGGTTTGC 783
* *
consensus_9296#2 ATGA-GAC---GACCGA--CAGCA--GTCAGCGCAAGGCGCGGGAAGCTTTACG--CCGT 352
consensus_9296#3 ATTACAAC---GACCGAAGCAACA--TCAGTCCCACGGCTCGCCGGATTTCATA--CCAT 320
consensus_9296#0 GNNGCNGNCGGGGACGGGGCNNCGACNCAGGGGGNAAGTGCGCNNAGCACGGNG--CNNC 1124
consensus_9296#1 ATTCCCGCGATGAATGGGGCTGCTGTTCTTGATGGAATGGTATGAAATCCGGCGAGCCGT 843
* * * * *
consensus_9296#2 -CAGCTCAACACAC--TGCTTGCTCGGCGTGTACGGGTTTGCGCGAGGGCCGTACGCACC 409
consensus_9296#3 -TCCATCAAGA-AC--AGCAGCCCCATTCATCGCGGGAATGCAAACCAAACAAACG-GCA 375
consensus_9296#0 GNCGGNGAANAGGCGGAGCGAGCNNGNGNGGCGTGAGGTACNGAGAGANNNGCATGNGGA 1184
consensus_9296#1 GGGACTGATGTTGCTTCGGTCGTTGTAATGGTTTGCAGTCCCGTGATGAATG---GGGCT 900
* * * * *
consensus_9296#2 TGAATTATCTGCGCCATGAG-----------ATGGACCTGTGCATGAAC--GCCGATCCG 456
consensus_9296#3 GCAGCAGCCCCAAACATCAC-----------AGGACCTCGTACCAGCCA--AACGA-CAG 421
consensus_9296#0 ANAGCANCGGNGCGCACGACCGATAGAGAGCAGNCNNCNGAGCAAGNCACTGCCGA-CNA 1243
consensus_9296#1 GCTGTTCTTGTTGCAATGGTA---TGAAATCCGGCGACGAATGGGACTGTTGTCGTCGTT 957
* **
consensus_9296#2 TGGAAGGCAGGAATTGC-----CACTCGAACGGTGGAA-CAAGATCGACGA-AGCGATA- 508
consensus_9296#3 CGGCAGCCCC-AATCAT-----CACGCCACCTACCTAC-CA-GCCAAACGACAGCAGCA- 472
consensus_9296#0 CGACCGGCGCGAGNCAGA--GGCACANGANAGAGGGNNANNCGCCAGANGAANGGAANNA 1301
consensus_9296#1 CAAATGGTATGAAATCCTCCGATGCATAAGAGTCATTCACCTGCCGTGCTGAACTCATCG 1017
* * * * *
consensus_9296#2 ----CGGTACCTTGTTATAC---CGCGTACGACCACCGG-GACTATCAGACGCTTATGGA 560
consensus_9296#3 ----GCCCCAATCATCACGC---CACCTACCTCCAGTGG-ATGATCCTGGCAACGAGAAA 524
consensus_9296#0 TGGGCGCNACGCCNCGNNAC---CGCGAACACCNGNCNGCNNCCACNCNGANAGCANNNA 1358
consensus_9296#1 CTTATGTTTCTTCTATTAACAAGCACTAGTACCGGTTTAGGCTCTTTCGGTTCCTATTCT 1077
* * * * *
consensus_9296#2 AGGAATATGAGCAACGGGT---GTAAGGCCGAATGAGCTG-AAACGGGCTAACCTAATAG 616
consensus_9296#3 TACTACA-GNATAACCGGG---CCCCCGCTTTTCCAACCG-AAT---------------- 563
consensus_9296#0 CGGNACANAGNCNNCNCGNAAGNCAGCGCGAGGNGGGNGNCGNTCGAGCGAAGCTANGAG 1418
consensus_9296#1 GTCGATATCGATTAACCAA---GCGTTCCAACAGCTTCTCTGCCTTTGCTA-GCTACTAG 1133
* * *
consensus_9296#2 ATCTTGGGCATACCACGCATGATCTTCNAACCGCAANCGG-------------------- 656
consensus_9296#3 ------------------------------------------------------------
consensus_9296#0 ACAGAGNGAGCANCGAGNCCNAACGCCGNGGACCGGGCGGCNAAACAGCAGNCNGTAGCC 1478
consensus_9296#1 CCCACGGACGGAGCTTTAGACCTTCCCAAAGCTGTAGCTTTTGAATATGATTTAA----- 1188
consensus_9296#2 ---
consensus_9296#3 ---
consensus_9296#0 GGC 1481
consensus_9296#1 ---
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||