These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9302#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1115 fasta sequence [TGCGGTTGAATCGGGAGGAGATATCGGACCTGTT-CGAGGGACGCATCCGGGCGCTGGAGGAGCGGCTGGTGCTGGAGCGCACCCGGTACGACGAGGAGAAGGCCAAGCTCGAGCAGCAGCTGGACGGGATGCGGAACGAGATGGCGGTGCAGCTGAAGGACTACCAGGATCTGATGGACATAAAGATTTCGCTCGACATGGAGATAGCGGCGTACGATAAGCTGCTGTCGCCGGAGGAAACGCGCCTCAACATTACGCCGAACGTGACGAGCACGAGCACCGGCGGTAGTTCCGCATTCACGTCCAGCTCGCGACTGTTTCGAACGCCGTCGCTGAAGCGCAAGCGC-AACAATCTGGACGAATCGATCGACTACTCGGTGGTGACGTCGGCCAAGGGGGACATCGAGGTGACGGAGTGTGATCCCGAGGGACGGTTCGTGCGCATCGCTAACAAGTCCAAGCAGGAGTACGCGCTGGCCGGCTGGCAGTTGA-TCCGGCGGCCAGTGGATGGGGCCGAGGTTAGCTATCGCTTCCCAAAGTCGGCCAAAATCGAGGGCAACGGGATGGTGACGGTTTGGGCCACGGTGGCAAACAGGAAGCCGGATCCACCGACGGATTTGGTGATGAAGGGTGCCCTCTGGACGGTGACCGATGCCATGTCGACGGTGCTGGTGAACGAGGAGGGTGAAGAGATGGCGCTGGTCGAACGGCACCGAATGATGAAGCCGCCCAAGGACAAATACTTCCACCACGAGGAGAGTGGCGGCCGGCTAGGGGTGTACGGAGCGTCCGGGCTGTCGAAATCTCCCTCGAACGGGTCGGAGGCTGGGCGTGTTGGGAACAAAAACGATGAACAGTGCAGCGTCATGTGAATGAGAGTGGGCGATGTTGGGCGCAGTAGAACAAGTAAGCGGTTTGGTTCCTTTTTGCATTCAGTGTTAAAGACCGTAGTCAGTCGTTGTGTCATTTTGTACGTAAAAATGTAAACTCCAAACGACACGAGAAGTACACGAGGAGAAGAAGCTTTAGTTTCAACGTTATATAGTCAATTGTATCGATCAATAAATGCATGCTAAAGATCAGTCTTGTTTGTCTTTTAGCCTAAAATGAAAAAA] [+] EMBL CNS094AR [TGCGGTTGAATCGGGAGGAGATATCGGACCTGTT CGAGGGACGCATCCGGGCGCTGGAGGAGCGGCTGGTGCTGGAGCGCACCCGGTACGACGAGGAGAAGGCCAAGCTCGAGCAGCAGCTGGACGGGATGCGGAACGAGATGGCGGTGCAGCTGAAGGACTACCAGGATCTGATGGACATAAAGATTTCGCTCGACATGGAGATAGCGGCGTACGATAAGCTGCTGTCGCCGGAGGAAACGCGCCTCAACATTACGCCGAACGTGACGAGCACGAGCACCGGCGGTAGTTCCGCATTCACGTCCAGCTCGCGACTGTTTCGAACGCCGTCGCTGAAGCGCAAGCGCAAACAATCTGGACGAATCGATCGACTACTCGGTGGTGACGTCGGCCAAGGGGGACATCGAGGTGACGGAGTGTGATCCCGAGGGACGGTTCGTGCGCATCGCTAACAAGTCCAAGCAGGAGTACGCGCTGGCCGGCTGGCAGTTGA TCCGGCGGCCAGTGGATGGGGCCGAGGTTAGCTATCGCTTCCCAAAGTCGGCCAAAATCGAGGGCAACGGGATGGTGACGGTTTGGGCCACGGTGGCAAACAGGAAGCCGGATCCACCGACGGATTTGGTGATGAAGGGTGCCCTCTGGACGGTGACCGATGCCATGTCGACGGTGCTGGTGAACGAGGAGGGTGAAGAGATGGCGCTGGTCGAACGGCACCGAATGATGAAGCCGCCCAAGGACAAATACTTCCACCAC ] [+] EMBL CNS0965I [ CCTGTTACGAGGGACGAATCCGGGCGCTGGAGGAGCGGCTGGTGCTGGAGCGCACCCGGTACGACGAGGAGAAGGCCAAGCTCGAGCAGCAGCTGGACGGGATGCGGAACGAGATGGCGGTGCAGCTGAAGGACTACCAGGATCTGATGGACATAAAGATTTCGCTCGACATGGAGATAGCGGCGTACGATAAGCTGCTGTCGTCGGAGGAAACGCGCCTCAACATTACGCCGAACGTGACGAGCACGAGCACCGGCGGTAGTTCCGCATTCACGTCCAGCTCGCGACTGTTTCGAACGCCGTCGCTGAAGCGCAAGCCA AACAATCTGGACGAATCGATCGACTACTCGGTGGTGACGTCGGCCAAGGGGGACATCGAGGTGACGGAGTGTGATCCCGAGGGACGGTTCGTGCGCATCGCTAACAAGTCCAAGCAGGAGTACGCGCTGGCCGGCTGGCAGTTGA TCCGGCGGCCAGTGGATGGGGCCGAGGTTAGCTATCGCTTCCCAAAGTCG ] [-] EMBL CNS0965J [ AGCAGCAGCTGGACGGGATGCGGAACGAGATGGCGGTGCAGCTGAAGGACTACCAGGATCTGATGGACATAAAGATTTCGCTCGACATGGAGATAGCGGCGTACGATAAGCTGCTGTCGTCGGAGGAAACGCGCCTCAACATTACGCCGAACGTGACGAGCACGAGCACCGGCGGTAGTTCCGCATTCACGTCCAGCTCGCGACTGTTTCGAACGCCGTCGCTGAAAGGCAAGCGC AACAATCTGGACGAATCGATCGACTACTCGGTGGTGACGTCGGCCAAGGGGGACATCGAGGTGACGGAGTGTGATCCCGAGGGACGGTTCGTGCGCATCGCTAACAAGTCCAAGCAGGAGTACGCGCTGGCCGGCTGGCAGTTGA TCCGGCGGCCAGTGGATGGGGCCGAGGTTAGCTATCGCTTCCCAAAGTCGGCCAAAATCGAGGGCAACGGGATGGTGACGGTTTGGGCCACGGTGGCAAACAGGAAGCCGGATCCACCGACGGATTTGGTGATGAAGGGTGCCCTCTGGACGGTGACCGATGCCATGTCGACGGTGCTGTTGAACTTTTAGGGTGAAGAGATGGCGCTGGTCGAACGGCACCGAATGATGAAGCCGCCCAAGGACAAATACTTCCACCACGAGGAGAGTGGCGGCCGGCTAGGGGTGTACGGAGCGTCCGGGCTGTCGAAATCTCCCTCGAACGGGTCGGAGGCTGGGCGTGTTGGGAACAAAAACGATGAACAGTGCAGCGTCATGTGAATGAGAGTGGGCGATGTTGGGCGCAGTAGAACAAGTAAGCGGTTTGGTTCCTTTTTGCATTCAGTGCTCCAGACCGTAGTCAGTCGTTGTGTCATTTTGTACGTAAAAATGTAAACTC ] [-] EMBL CNS094AS [ TCGCCGGAGGAAACGCGCCTCAACATTACGCCGAACGTGACGAGCACGAGCACCGGCGGTAGTTCCGCATTCACGTCCCGCTCGCGACTGTTTCGAACGCCGTCGCTGAAGCGCAAGCGC AACAATCTGGACGAATCGATCGACTACTCGGTGGTGACGTCGGCCAAGGGGGACATCGAGGTGACGGAGTGTGATCCCGAGGGACGGTTCGTGCGCATCGCTAACAAGTCCAAGCAGGAGTACGCGCTGGCCGGCTGGCAGTTGA TCCGGCGGCCAGTGGATGGGGCCGAGGTTAGCTATCGCTTCCCAAAGTCGGCCAAAATCGAGGGCAACGGGATGGTGACGGTTTGGGCCACGGTGGCAAACAGGAAGCCGGATCCACCGACGGATTTGGTGATGAAGGGTGCCCTCTGGACGGTGACCGATGCCATGTCGACGGTGCTGGTGAACGAGGAGGGTGAAGAGATGGCGCTGGTCGAACGGCTCCGAATGATGAAGCCGCCCAAGGACAAATACTTCCACCACGAGGAGAGTGGCGGCCGGCTAGGGGTGTACGGAGCGTCCGGGCTGTCGAAATCTCCCTCGAACGGGTCGGAGGCTGGGCGTGTTGGGAACAAAAACGATGAACAGTGCAGCGTCATGTGAATGAGAGTGGGCGATGTTGGGCGCAGTAGAACAAGTAAGCGGTTTGGTTCCTTTTTGCATTCAGTGTTAAAGACCGTAGTCAGTCGTTGTGTCATTTTGTACGTAAAAATGTAAACTCCAAACGACACGAGAAGTACACGAGGAGAAGAAGCTTTAGTTTCAACGTTATATAGTCAATTGTATCGATCAATAAATGCATGCTAAAGATCAGTCTTGTTTGTCTTTTAGCCTAAAATGAAAAAA] [-] EMBL CNS08HNZ [ cCCAGCTCGCCACTGTTTCGAACGCCGTCGCTGAAGCGCAAGCGC AACAATCTGGACGAATCGATCGACTACTCGGTGGTGACGTCGGCCAAGGGGGACATCGAGGTGACGGAGTGTGATCCCGAGGGACGGTTCGTGCGCATCGCTAACAAGTCCAAGCAGGAGTACGCGCTGGCCGGCTGGCAGTTGATTCCGGCGGCCAGTGGATGGGGCCGAGGTTAG TATCGCTTCCCAAAGTCGGCCAAAATCGAGGGCAACGGGATGGTGACGGTTTGGGCCACGGTGGCAAACAGGAAGCCGGATCCACCGACGGATTTGGTGATGAAGGGTGCCCTCTGGACGGTGACCGATGCCATGTCGACGGTGCTGGTGAACGAGGAGGGTGAAGAGATGGCGCTGGTCGAACGGCACCGAATGATGAAGCCGCCCAAGGACAAATACTTCCACCACGAGGAGAGTGGCGGCCGGCTAGGGGTGTACGGAGCGTCCGGGCTGTCGAAATCTCCCTCGAACGGGTCGGAGGCTGGGCGTGTTGGGAACAAAAACGATGAACAGTGCAGCGTCATGTGAATGAGAGTGGGCGATGTTGGGCGCAGTAGAACAAGTAAGCGGTTTGGTTCCTTTTTGCATTCAGTGTTAAAGACCGTAGTCAGTCGTTGTGTCATTTTGTACGTAAAAATGTAAACTCCAAACGACACGAGAAGTACACGAGGAGAAGAAGCTTTAGTTTCAACGTTATATAGTCAATTGTATC ] consensusID : consensus_9302#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1095 fasta sequence [CCGCGGACGCGTGGGTGCTGCAGAAGTGTGTGAAGCATCATATCAGTACCAAACCTTTAAACAGTTAAAACAGTTAAAAAAAACTCACAAATGTGACGATCGAGTTGAGTGTTTTCCTTTTTAATCACTTTTAGTAACAAAAACAAACTCCTGAATTCAGACAAACAAAAGTAATTCGCATCAAAATACGAGTGATCGTGCGTTAGCCGACGCGTACTTTCTCGTTGAGGTTAATCCCGCTGGGACGCTTCCATTTTTCCACACCAACAATGTCACAAAAAATGAAGAAACCGGCCGCCAAGCCATCCTCCACCACCGCGACCAACAATGGCAACACGGCCCATACGCCCAGCGGTGCCCAGTCCGTGTCGTCGTCCGCCTCGACCGTTTCGAGCGCCTCGGAATCGTCGGAAACGGCCCTCAGCCCGTCGCGCCGCAGCCGACTGCACGAAAAGAACAGCCTCATGAACCTGAACGATCGGCTGGCCTGTTACATCGAGCGGGTGCGCTACCTGGAGCAGGAGAACTCACGCCTCTCGCTCGAGCTGACCACCTTCCAGGAGACGGCCGCCCGGGAAGTGTCCGGGCTGAAGTCGATCTACGAGCACGAGCTGGCGGACGCCCGCAAGCTGCTCGACGAGACGGCCCGCGACAAGGCAAAGGTCGAGATCGACGCGAAGCGCTACTGGGAGGAGAACGAGCAGCTGCGCACGAAGCTGAACCGCCGGACGAAGGAGCTGAGCGAGCTGGAGAAGGAGGCACGGGCGAACGAGTCGCGGTGCATCGAGCTGACCGCGAACTACAACACGCTCAGCTCGGAGCGCAAGAAGCTGCAGGACGAGCTGAGGGAGGCGGACAAGGAGTCGGACAAGCTGCGCCGCACGTTCGAGAAGATGCGCAAGGACTACGAGCACGAGACGCTGGTGCGCGTGGACCTGGAGAACAACATACAGAGCCTGCGGGAGGAGCTCACGTTCAAGGAGCAGGTGCACAGTCAGGAGCTGAGCGAGAGCAAGCTGCGCCGGCAGAGCGAGATCAGCGAGATCGACGGCTTCCTGATGGAGCAGTACGAGACGAAGCTGCAGCAGACGCTGC] [+] EMBL BM605181 [CCGCGGACGCGTGGGTGCTGCAGAAGTGTGTGAAGCATCATATCAGTACCAAACCTTTAAACAGTTAAAACAGTTAAAAAAAACTCACAAATGTGACGATCGAGTTGAGTGTTTTCCTTTTTAATCACTTTTAGTAACAAAAACAAACTCCTGAATTCAGACAAACAAAAGTAATTCGCATCAAAATACGAGTGATCGTGCGTTAGCCGACGCGTACTTTCTCGTTGAGGTTAATCCCGCTGGGACGCTTCCATTTTTCCACACCAACAATGTCACAAAAAATGAAGAAACCGGCCGCCAAGCCATCCTCCACCACCGCGACCAACAATGGCAACACGGCCCATACGCCCAGCGGTGCCCAGTCCGTGTCGTCGTCCGCCTCGACCGTTTCGAGCGCCTCGGAATCGTCGGAAACGGCCCTCAGCCCGTCGCGCCGCAGCCGACTGCACGAAAAGAACAGCCTCATGAACCTGAACGATCGGCTGGCCTGTTACATCGAGC ] [+] EMBL BM598368 [ ccgtacagaTGCTGCAGAAGTGTGTGAAGCATCATATCAGTACCAAACCTTTAAACAGTTAAAACAGTTAAAAAAAACTCACAAATGTGACGATCGAGTTGAGTGTTTTCCTTTTTAATCACTTTTAGTAACAAAAACAAACTCCTGAATTCAGACAAACAAAAGTAATTCGCATCAAAATACGAGTGATCGTGCGTTAGCCGACGCGTACTTTCTCGTTGAGGTTAATCCCGCTGGGACGCTTCCATTTTTCCACACCAACAATGTCACAAAAAATGAAGAAACCGGCCGCCAAGCCATCCTCCACCACCGCGACCAACAATGGCAACACGGCCCATACGCCCAGCGGTGCCCAGTCCGTGTCGTCGTCCGCCTCGACCGTTTCGAGCGCCTCGGAATCGTCGGAAACGGCCCTCAGCCCGTCGCGCCGCAGCCGACTGCACGAAAAGAACAGCCTCATGAACCTGAACGATCGGCTGGCCTGTTACATCGAGCGGGTGCGCTACCTGGAGCAGGAGAACTCACGCCTCTCGCTCGAGCTGACCACCTTCCAGGAGACGGCCGCCCGGGAAGTGTCCGGGCTGAAGTCGATCTACGAGCACGAGCTGGCGGACGCCCGCAAGCTGCTCGACGAGACGGCCCGCGACAAGGCAAAGGTCGAGATCGACGCGAAGCGCTACTGGGAGG ] [+] EMBL BM584846 [ ccgGTGAAGCATCATATCAGTACCAAACCTTTAAACAGTTAAAACAGTTAAAAAAAACTCACAAATGTGACGATCGAGTTGAGTGTTTTCCTTTTTAATCACTTTTAGTAACAAAAACAAACTCCTGAATTCAGACAAACAAAAGTAATTCGCATCAAAATACGAGTGATCGTGCGTTAGCCGACGCGTACTTTCTCGTTGAGGTTAATCCCGCTGGGACGCTTCCATTTTTCCACACCAACAATGTCACAAAAAATGAAGAAACCGGCCGCCAAGCCATCCTCCACCACCGCGACCAACAATGGCAACACGGCCCATACGCCCAGCGGTGCCCAGTCCGTGTCGTCGTCCGCCTCGACCGTTTCGAGCGCCTCGGAATCGTCGGAAACGGCCCTCAGCCCGTCGCGCCGCAGCCGACTGCACGAAAAGAACAGCCTCATGAACCTGAACGATCGGCTGGCCTGTTACATCGAGC GGTGCGCTACCTGGAGCAGGAGAACTCACGCCTCTCGCTCGAGCTGACCACCTTCCAGGAGACGGCCGCCCGGGAAGTGTCCGGGCTGAAGTCGATCTACGAGCACGAGCTGGCGGACGCCCGCAAGCTGCTCGACGAGACGGCCCGCGACAAGGCAAAGGTCGAG ] [+] EMBL BM588777 [ ccgCAAATGTGACGATCGAGTTGAGTGTTTTCCTTTTTAATCACTTTTAGTAACAAAAACAAACTCCTGAATTCAGACAAACAAAAGTAATTCGCATCAAAATACGAGTGATCGTGCGTTAGCCGACGCGTACTTTCTCGTTGAGGTTAATCCCGCTGGGACGCTTCCATTTTTCCACACCAACAATGTCACAAAAAATGAAGAAACCGGCCGCCAAGCCATCCTCCACCACCGCGACCAACAATGGCAACACGGCCCATACGCCCAGCGGTGCCCAGTCCGTGTCGTCGTCCGCCTCGACCGTTTCGAGCGCCTCGGAATCGTCGGAAACGGCCCTCAGCCCGTCGCGCCGCAGCCGACTGCACGAAAAGAACAGCCTCATGAACCTGAACGATCGGCTGGCCTGTTACATCGAGCGGGTGCGCTACCTGGAGCAGGAGAACTCACGCCTCTCGCTCGAGCTGACCACCTTCCAGGAGACGGCCGCCCGGGAAGTGTCCGGGCTGAAGTCGATCTACGAGCACGAGCTGGCGGACGCCCGCAAGCTGCTCGACGAGACGGCCCGCGACAAGGCAAAGGTCGAGATCGACGCGAAGCGCTACTGGGAGGAGAACGAGCAGCTGCGCACGAAGCTGAACCGCCGGACGAAGGAGCTGAGCGAGCTGGAGAAGGAG ] [+] EMBL BM606954 [ ccgGCCCGTCGCGCCGCAGCCGACTGCACGAAAAGAACAGCCTCATGAACCTGAACGATCGGCTGGCCTGTTACATCGAGCGGGTGCGCTACCTGGAGCAGGAGAACTCACGCCTCTCGCTCGAGCTGACCACCTTCCAGGAGACGGCCGCCCGGGAAGTGTCCGGGCTGAAGTCGATCTACGAGCACGAGCTGGCGGACGCCCGCAAGCTGCTCGACGAGACGGCCCGCGACAAGGCAAAGGTCGAGATCGACGCGAAGCGCTACTGGGAGGAGAACGAGCAGCTGCGCACGAAGCTGAACCGCCGGACGAAGGAGCTGAGCGAGCTGGAGAAGGAGGCACGGGCGAACGAGTCGCGGTGCATCGAGCTGACCGCGAACTACAACACGCTCAGCTCGGAGCGCAAGAAGCTGCAGGACGAGCTGAGGGAGGCGGACAAGGAGTCGGACAAGCTGCGCCGCACGTTCGAGAAGATGCGCAAGGACTACGAGCACGAGACGCTGGTGCGCGTGGACCTGGAGAACAACATACAGAGCCTGCGGGAGGAGCTCACGTTCAAGGAGCAGGTGCACAGTCAGGAGCTGAGCGAGAGCAAGCTGCGCCGGCAGAGCGAGATCAGCGAGATCGACGGCTTCCTGATGGAGCAGTACGAGACGAAGCTGCAGCAGACGCTGC] consensusID : consensus_9302#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 956 fasta sequence [AATCTCGCACTTCATTACAGATGCTGCAGAAGTGTGTGAAGCATCATATCAGTAGCGAACGTTTGAACAGTTAAAACAGTTAAAAAACTCACAAATGTGACGATCGAGTTTAGTGTTTTCCTTTTTAATCAGTTTTAGTAACAAAAACAAACTCCTGAATTCAGACAAACAAAAGTAATTCGCATCAAAATACGAGTGATCGTGCGTTAGGGACGCGTACTTTCTCGTTGAGGTTAATCCCGCTGGGACGCTTCCATTTTTCCACACCACCAAACTGCGCACCAAAAATGTCACAGAAAATGAAGAAACCGGCCGCCAAGCCATCCTCCACCACCGCAACCAACAATGGCAACACGGCCCATACGCCCAGCTCGCGACTGTTTCGAACGCCGTCGCTGAAGCGCAAGCGCAAACAATCTGGACGAATCGATCGACTACTCGGTGGTGACGTCGGCCAAGGGGGACATCGAGGTGACGGAGTGTGATCCCGAGGGACGGTTCGTGCGCATCGCTAACAAGTCCAAGCAGGAGTACGCGCTGGCCGGCTGGCAGTTGATCCGGCGGCCAGTGGATGGGGCCGAGGTTAGCTATCGCTTCCCAAAGTCGGCCAAAATCGAGGGCAACGGGATGGTGACGGTTTGGGCCACGGTGGCAAACAGGAAGCCGGATCCACCGACGGATTTGGTGATGAAGGGTGCCCTCTGGACGGTGACCGATGCCATGTCGACGGTGCTGGTGAACGAGGAGGGTGAAGAGATGGCGCTGGTCGAACGGCACCGAATGATGAAGCCGCCCAAGGACAAATACTTCCACCACGAGGAGAGTGGCGGCCGGCTAGGGGTGTACGGAGCGTCCGGGCTGTCGAAATCTCCCTCGAACGGGTCGGAGGCTGGGCGTGTTGGGAAAAAAAACGATGAACAGTGCAGCTCATGTGAATTAGAGTGGGCGATGTTGGG] [+] EMBL CNS08HNY [AATCTCGCACTTCATTACAGATGCTGCAGAAGTGTGTGAAGCATCATATCAGTAGCGAACGTTTGAACAGTTAAAACAGTTAAAAAACTCACAAATGTGACGATCGAGTTTAGTGTTTTCCTTTTTAATCAGTTTTAGTAACAAAAACAAACTCCTGAATTCAGACAAACAAAAGTAATTCGCATCAAAATACGAGTGATCGTGCGTTAGGGACGCGTACTTTCTCGTTGAGGTTAATCCCGCTGGGACGCTTCCATTTTTCCACACCACCAAACTGCGCACCAAAAATGTCACAGAAAATGAAGAAACCGGCCGCCAAGCCATCCTCCACCACCGCAACCAACAATGGCAACACGGCCCATACGCCCAGCTCGCGACTGTTTCGAACGCCGTCGCTGAAGCGCAAGCGCAAACAATCTGGACGAATCGATCGACTACTCGGTGGTGACGTCGGCCAAGGGGGACATCGAGGTGACGGAGTGTGATCCCGAGGGACGGTTCGTGCGCATCGCTAACAAGTCCAAGCAGGAGTACGCGCTGGCCGGCTGGCAGTTGATCCGGCGGCCAGTGGATGGGGCCGAGGTTAGCTATCGCTTCCCAAAGTCGGCCAAAATCGAGGGCAACGGGATGGTGACGGTTTGGGCCACGGTGGCAAACAGGAAGCCGGATCCACCGACGGATTTGGTGATGAAGGGTGCCCTCTGGACGGTGACCGATGCCATGTCGACGGTGCTGGTGAACGAGGAGGGTGAAGAGATGGCGCTGGTCGAACGGCACCGAATGATGAAGCCGCCCAAGGACAAATACTTCCACCACGAGGAGAGTGGCGGCCGGCTAGGGGTGTACGGAGCGTCCGGGCTGTCGAAATCTCCCTCGAACGGGTCGGAGGCTGGGCGTGTTGGGAAAAAAAACGATGAACAGTGCAGCTCATGTGAATTAGAGTGGGCGATGTTGGG] consensusID : consensus_9302#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 886 fasta sequence [TCGTCGGAGGAAACGCGCCTCAACATTACGCCGAACGTGACGAGCACGAGCACCGGCGGTGGCTCCGCATTCACGTCCAGCTCGCGACTGTTTCGGACGCCGTCGCTGAAGCGCAACGCGAACAATCTGGACGAATCGATCGACTACTCGGTGGTGACGTCGGCCAAGGGGGACATCGAGGTGACGGAGTGTGATCCCGAGGGACGGTTCGTGCGCATCGCCAACAAGTCCAAGCAGGAGTACGCGCTGGCCGGCTGGCAGTTGATCCGGCGGCCAGTGGATGGGGCCGAGGTTAGCTATCGCTTCCCAAAGTCG-GCCAAAATCGAGGGCAACGGGATGGTGACGGTTTGGGCCACGGTGGCAAACCGGAAGCCGGATCCACCGACGGATTTGGTGATGAAGGGTGCCCTCTGGACGGTGACTGATGCCATGTCGACGGTGCTGGTGAACGAGGAGGGTGAAGAGATGGCGCTGGTCGAACGGCACCGAATGATGAAGCCGCCCAAGGACAAATACTTCCACCACGAGGAGAGTGGCGGCCGGCTAGGGGTGTACGGAGCGTCCGGGCTGTCGAAATCACCCTCCAACGGGTCGGAAGCTGGGCGTGTTGGGAACAAAAAAGATGAACAGTGTAGCGTCATGTGAATGAGGGTGGACGATGTTGTGCGCAGTAGAACGAGTAAGCGGTTTGGTTCCTTTTTGCATTCAGTGTTAAAGACCGTAGTCAGTCGTTGTGTCATTTTGTACGTAAAAATGTAAACTCCAAACGACACGAGAAGTACACGAGGAGAAGAAGCTTTAGTTTCAACGTTATATAGTCAATTGTATCGATCAATAAATGCATGCTAAAGATCAAAAAAAAAAAAAAAAAAAAAGGGCACATGTG] [+] EMBL CNS08VI3 [TCGTCGGAGGAAACGCGCCTCAACATTACGCCGAACGTGACGAGCACGAGCACCGGCGGTGGCTCCGCATTCACGTCCAGCTCGCGACTGTTTCGGACGCCGTCGCTGAAGCGCAACGCGAACAATCTGGACGAATCGATCGACTACTCGGTGGTGACGTCGGCCAAGGGGGACATCGAGGTGACGGAGTGTGATCCCGAGGGACGGTTCGTGCGCATCGCCAACAAGTCCAAGCAGGAGTACGCGCTGGCCGGCTGGCAGTTGATCCGGCGGCCAGTGGATGGGGCCGAGGTTAGCTATCGCTTCCCAAAGTCG GCCAAAATCGAGGGCAACGGGATGGTGACGGTTTGGGCCACGGTGGCAAACCGGAAGCCGGATCCACCGACGGATTTGGTGATGAAGGGTGCCCTCTGGACGGTGACTGATGCCATGTCGACGGTGCTGGTGAACGAGGAGGGTGAAGAGATGGCGCTGGTCGAACGGCACCGAATGATGAAGCCGCCCAAGGACAAATACTTCCACCACGAGGAGAGTGGCGGCCGGCTAGGGGTGTACGGAGCGTCCGGGCTGTCGAAATCACCCTCCAACGGGTCGGAAGCTGGGCGTGTTGGGAACAAAAAAGATGAACAGTGTAGCGTCATGTGAATGAGGGTGGACGATGTTGTGCGCAGTAGAACGAGTAAGCGGTTTGGTTCCTTTTTGCATTCAGTGTTAAAGACCGTAGTCAGTCGTTGTGTCATTTTGTACGTAAAAATGTAAACTCCAAACGACACGAGAAGTACACGAGGAGAAGAAGCTTTAGTTTCAACGTTATATAGTCAATTGTATCGATCAATAAATGCATGCTAAAGATCAAAAAAAAAAAAAAAAAAAAAGGGCACATGTG] [-] EMBL CNS08VI4 [ TCCAAGCAGGAGTACGCGCTGGCCCGCTGGCAGTTGATCCGGCGGCCAGTGGATGGGGCCGAGGTTAG TATCGCTTCCCAAAGTCGCGCCAAAATCGAGGGCAACGGGATGGTGACGGTTTGGGCCACGGTGGCAAACCGGAAGCCGGATCCACCGACGGATTTGGTGATGAAGGGTGCCCTCTGGACGGTTACTGATGCCATGTCGACGGTGCTGGTGAACGAGGAGGGTGAAGAGATGGCGCTGGTCGAACGGCACCGAATGATGAAGCCGCCCAAGGACAAATACTTCCACCACGAGGAAAGTGGCGGCCGGCTAGGGGTGTACGGAGCGTCCGGGCTGTCGAAATCACCCTCCAACGGGTCGGAAGCTGGGCGTGTTGGGAACAAAAACGATGAACAGTGTAGCGTCATGTGAATGAGGGTGGACGATGTTGTGCGCAGTAGAACGAGTAAGCGGTTTGGTTCCTTTTTGCATTCAGTGTTAAAGACCGTAGTCAGTCGTTGTGTCATTTTGTACGTAAAAATGTAAACTCCAAACGACACGAGAAGTACACGAGGAGAAGAAGCTTTAGTTTCAACGTTATATAGTCAATTGTATCGATCAATAAAT ] consensusID : consensus_9302#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 648 fasta sequence [CCGCGGACGCGTGGGTACAGATGCTGCAGAAGTGTGTGAAGCATCATATCAGTAGCGAACGTTTAAACAGTTAAAACAGTTAAAAAACCTCACAAATGTGACGATCGAGTTTAGTGTTTTCCTTTTTAATCACTTTTAGTAACAAAAACAAACTCCTGAATTCAGACAAACAAAAGTGATCGTGCGTTAGCGGACGCGTACTTTCTCGTTGAGGTTAATCCCGCTGGGACGCTTCCATTTTTCCACACCACCAAACTGCGCACCAACAATGTCACAGAAAATGAAGAAACCGGCCGCCAAGCCATCCTCCACCACCGCGACCGCCAATACCAACACGGCCCATACGCCCAGCGGTGCCCAGTCCGTGTCGTCGTCCGCCTCGACCGTTTCGAGCGCCTCGGAATCGTCGGAAACGGCCCTCAGCCCGTCGCGCCGTAGCCGACTGCACGAAAAGAACAGCCTCATGAACCTGAACGATCGGCTGGCCTGTTACATCGAGCGGGTGCGCTACCTGGAGCAGGAGAACTCACGCCTCTCGCTCGAGCTGACCACCTTCCAGGAGACGGCCGCCCGGGAAGTGTCCGGGCTGAAGTCGATCTACGAGCACGAGCTGGCGGACGCACGCAAGCTGCTCGACGAGACGGCCCG] [+] EMBL BM604165 [CCGCGGACGCGTGGGTACAGATGCTGCAGAAGTGTGTGAAGCATCATATCAGTAGCGAACGTTTAAACAGTTAAAACAGTTAAAAAACCTCACAAATGTGACGATCGAGTTTAGTGTTTTCCTTTTTAATCACTTTTAGTAACAAAAACAAACTCCTGAATTCAGACAAACAAAAGTGATCGTGCGTTAGCGGACGCGTACTTTCTCGTTGAGGTTAATCCCGCTGGGACGCTTCCATTTTTCCACACCACCAAACTGCGCACCAACAATGTCACAGAAAATGAAGAAACCGGCCGCCAAGCCATCCTCCACCACCGCGACCGCCAATACCAACACGGCCCATACGCCCAGCGGTGCCCAGTCCGTGTCGTCGTCCGCCTCGACCGTTTCGAGCGCCTCGGAATCGTCGGAAACGGCCCTCAGCCCGTCGCGCCGTAGCCGACTGCACGAAAAGAACAGCCTCATGAACCTGAACGATCGGCTGGCCTGTTACATCGAGCGGGTGCGCTACCTGGAGCAGGAGAACTCACGCCTCTCGCTCGAGCTGACCACCTTCCAGGAGACGGCCGCCCGGGAAGTGTCCGGGCTGAAGTCGATCTAC ] [+] EMBL BM586354 [ ccgGAAGTGTGTGAAGCATCATATCAGTAGCGAACGTTTAAACAGTTAAAACAGTTAAAAAACCTCACAAATGTGACGATCGAGTTTAGTGTTTTCCTTTTTAATCACTTTTAGTAACAAAAACAAACTCCTGAATTCAGACAAACAAAAGTGATCGTGCGTTAGCGGACGCGTACTTTCTCGTTGAGGTTAATCCCGCTGGGACGCTTCCATTTTTCCACACCACCAAACTGCGCACCAACAATGTCACAGAAAATGAAGAAACCGGCCGCCAAGCCATCCTCCACCACCGCGACCGCCAATACCAACACGGCCCATACGCCCAGCGGTGCCCAGTCCGTGTCGTCGTCCGCCTCGACCGTTTCGAGCGCCTCGGAATCGTCGGAAACGGCCCTCAGCCCGTCGCGCCGTAGCCGACTGCACGAAAAGAACAGCCTCATGAACCTGAACGATCGGCTGGCCTGTTACATCGAGCGGGTGCGCTACCTGGAGCAGGAGAACTCACGCCTCTCGCTCGAGCTGACCACCTTCCAGGAGACGGCCGCCCGGGAAGTGTCCGGGCTGAAGTCGATCTACGAGCACGAGCTGGCGGACGCACGCAAGCTGCTCGACGAGACGGCCCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9302#0 ------------------------------------------------------------ consensus_9302#3 ------------------------------------------------------------ consensus_9302#2 AATCTCGCACTTCATTACAGATGCTGCAGAAGTGTGTGAAGCATCATATCAGTAGCGAAC 60 consensus_9302#1 CCGCGGACGCGTGGGT------GCTGCAGAAGTGTGTGAAGCATCATATCAGTACCAAAC 54 consensus_9302#4 CCGCGGACGCGTGGGTACAGATGCTGCAGAAGTGTGTGAAGCATCATATCAGTAGCGAAC 60 consensus_9302#0 -----TGCGGTTGAATCGGGAGGAGATATCGGACCTGTTCGAGGGACGCATCCGGGCGCT 55 consensus_9302#3 ------------------------------------------------------------ consensus_9302#2 GTTTGAACAGTTAAAACAGTTAAAAAACTCACAAATGT--GACGATCGAGTTTAGTGTTT 118 consensus_9302#1 CTTTAAACAGTTAAAACAGTTAAAAAAAACTCACAAATGTGACGATCGAGTTGAGTGTTT 114 consensus_9302#4 GTTTAAACAGTTAAAACAGTTAAAAAAC-CTCACAAATGTGACGATCGAGTTTAGTGTTT 119 consensus_9302#0 GGAGGAGCGGCTGGTGCTGGAGCGCACCCGGTACGACGAGGAGAAGGCCAAGCTCGAGCA 115 consensus_9302#3 ------------------------------------------------------------ consensus_9302#2 TCCTTTTTAATCAGTTTTAGTAACAAAAACAAACTCCTGAATTCAGACAAACAAAAGTAA 178 consensus_9302#1 TCCTTTTTAATCACTTTTAGTAACAAAAACAAACTCCTGAATTCAGACAAACAAAAGTAA 174 consensus_9302#4 TCCTTTTTAATCACTTTTAGTAACAAAAACAAACTCCTGAATTCAGACAAACAAAAGT-- 177 consensus_9302#0 GCAGCTGGACGGGATGCGGAACGAGATGGCGGT-GCAGCTGAAGGACTACCAGGATCTGA 174 consensus_9302#3 ------------------------------------------------------------ consensus_9302#2 TTCGCATCAAAATACGAGTGATCGTGCGTTAGG-GACGCGTACTTTCTCGTTGAGGTTAA 237 consensus_9302#1 TTCGCATCAAAATACGAGTGATCGTGCGTTAGCCGACGCGTACTTTCTCGTTGAGGTTAA 234 consensus_9302#4 -------------------GATCGTGCGTTAGCGGACGCGTACTTTCTCGTTGAGGTTAA 218 consensus_9302#0 TGGACATAAAGATTTCGCTCGACATGGAGATAGCGGCGTACGATAAGCTGCTGTCGCCGG 234 consensus_9302#3 -----------------------------------------------------TCGTCGG 7 consensus_9302#2 TCCCGCTGGGACGCTTCCATTTTTCCACACCACCAAACTGCGCACCAAAAATGTCACAGA 297 consensus_9302#1 TCCCGCTGGGACGCTTCCATTTTTCCACACCA---------------ACAATGTCACAAA 279 consensus_9302#4 TCCCGCTGGGACGCTTCCATTTTTCCACACCACCAAACTGCGCACCAACAATGTCACAGA 278 ** consensus_9302#0 AGGAAACGCGCCTCAACATTACGCCGAACGTGACGAGCACGAGCACCGGCGGTAGTTCCG 294 consensus_9302#3 AGGAAACGCGCCTCAACATTACGCCGAACGTGACGAGCACGAGCACCGGCGGTGGCTCCG 67 consensus_9302#2 AAATGAAGAAACCGGCCGCCAAGCCATCCTCCACCACCGCAACCAACAATGGCAACACGG 357 consensus_9302#1 AAATGAAGAAACCGGCCGCCAAGCCATCCTCCACCACCGCGACCAACAATGGCAACACGG 339 consensus_9302#4 AAATGAAGAAACCGGCCGCCAAGCCATCCTCCACCACCGCGACCGCCAATACCAACACGG 338 * * * * * * *** * ** * * * * * * * * consensus_9302#0 CATTCACGTCCAGCTCGCGACTGTTTCGAACGCCGTCGCTGAAGCGCAAGCGCAA-CAAT 353 consensus_9302#3 CATTCACGTCCAGCTCGCGACTGTTTCGGACGCCGTCGCTGAAGCGCAACGCGAA-CAAT 126 consensus_9302#2 CCCATACGCCCAGCTCGCGACTGTTTCGAACGCCGTCGCTGAAGCGCAAGCGCAAACAAT 417 consensus_9302#1 CCCATACGCCCAGCG-GTGCCCAGTCCG--TGTCGTCGTC----CGC---CTCGACCGTT 389 consensus_9302#4 CCCATACGCCCAGCG-GTGCCCAGTCCG--TGTCGTCGTC----CGC---CTCGACCGTT 388 * *** ***** * * * * ** * ***** *** * * * consensus_9302#0 CTGGACGAATCGATCGACTACTCGGTGGTGACG-TCGGCCAAGGGGGACAT---CGAGGT 409 consensus_9302#3 CTGGACGAATCGATCGACTACTCGGTGGTGACG-TCGGCCAAGGGGGACAT---CGAGGT 182 consensus_9302#2 CTGGACGAATCGATCGACTACTCGGTGGTGACG-TCGGCCAAGGGGGACAT---CGAGGT 473 consensus_9302#1 TCGAGCGCCTCG---GAATCGTCGGAAACGGCCCTCAGCCCGTCGCGCCGCAGCCGACTG 446 consensus_9302#4 TCGAGCGCCTCG---GAATCGTCGGAAACGGCCCTCAGCCCGTCGCGCCGTAGCCGACTG 445 * ** *** ** * **** * * ** *** * * * *** consensus_9302#0 GACGGAGTGTG-ATCCCGAGGGACGGTTCGTGCGCATCGCTAACAAGTCCAAGCAGGAGT 468 consensus_9302#3 GACGGAGTGTG-ATCCCGAGGGACGGTTCGTGCGCATCGCCAACAAGTCCAAGCAGGAGT 241 consensus_9302#2 GACGGAGTGTG-ATCCCGAGGGACGGTTCGTGCGCATCGCTAACAAGTCCAAGCAGGAGT 532 consensus_9302#1 CACGAAAAGAACAGCCTCATGAAC---CTGAACGATCGGCTGGCCTGTTACATCGAGCGG 503 consensus_9302#4 CACGAAAAGAACAGCCTCATGAAC---CTGAACGATCGGCTGGCCTGTTACATCGAGCGG 502 *** * * * ** * * ** * ** ** * ** * * * * consensus_9302#0 ACGCGCTGGCCGGCTGGCAGTTGATCCGGCGGCCAGTGGATGGGGCCGAGGTTAGCTATC 528 consensus_9302#3 ACGCGCTGGCCGGCTGGCAGTTGATCCGGCGGCCAGTGGATGGGGCCGAGGTTAGCTATC 301 consensus_9302#2 ACGCGCTGGCCGGCTGGCAGTTGATCCGGCGGCCAGTGGATGGGGCCGAGGTTAGCTATC 592 consensus_9302#1 GTGCGCTACCTGG--AGCAGGAGAACTCACG-CCTCTCGCTCGAGCTGA------CCACC 554 consensus_9302#4 GTGCGCTACCTGG--AGCAGGAGAACTCACG-CCTCTCGCTCGAGCTGA------CCACC 553 ***** * ** **** ** * ** ** * * * * ** ** * * * consensus_9302#0 GCTTCCCAAAGTCGGCCAAAATCGAGGGCAACGGGATGGTGACGGTTTGGGCCACGGTGG 588 consensus_9302#3 GCTTCCCAAAGTCGGCCAAAATCGAGGGCAACGGGATGGTGACGGTTTGGGCCACGGTGG 361 consensus_9302#2 GCTTCCCAAAGTCGGCCAAAATCGAGGGCAACGGGATGGTGACGGTTTGGGCCACGGTGG 652 consensus_9302#1 --TTCCAGGAGACGGCCGCCCGGGAAGTGTCCGGGCTGAAGTCGATCT-----ACGAGCA 607 consensus_9302#4 --TTCCAGGAGACGGCCGCCCGGGAAGTGTCCGGGCTGAAGTCGATCT-----ACGAGCA 606 **** ** ***** ** * **** ** * ** * * *** consensus_9302#0 CAAACAGGAAGCCGGATCCACCGACGGATTTGGTGATGAAGGGTGCCCTCTGGACGGTGA 648 consensus_9302#3 CAAACCGGAAGCCGGATCCACCGACGGATTTGGTGATGAAGGGTGCCCTCTGGACGGTGA 421 consensus_9302#2 CAAACAGGAAGCCGGATCCACCGACGGATTTGGTGATGAAGGGTGCCCTCTGGACGGTGA 712 consensus_9302#1 CGAGCTGG----CGGA--CGCCCGCAAGCTGCTCGACGAGACG-GCCCGCGACAAGGCAA 660 consensus_9302#4 CGAGCTGG----CGGA--CGCACGCAAGCTGCTCGACGAGACG-GCCCG----------- 648 * * * ** **** * * * * ** ** * **** consensus_9302#0 CCGATGCCATGTCGACGGTGCTGGTGAACGAGGAGGGTGAAGAGATGGCGCTGGTCGAAC 708 consensus_9302#3 CTGATGCCATGTCGACGGTGCTGGTGAACGAGGAGGGTGAAGAGATGGCGCTGGTCGAAC 481 consensus_9302#2 CCGATGCCATGTCGACGGTGCTGGTGAACGAGGAGGGTGAAGAGATGGCGCTGGTCGAAC 772 consensus_9302#1 AGGTCGAGATCGACGCGAAGCGCTACTGGGAGGAGAACGAGCAGCTGCGCACGAAGCTGA 720 consensus_9302#4 ------------------------------------------------------------ consensus_9302#0 GGCACCGAATGATGAAGCCGCCCAAGGACAAATACTTCCACCACGAGGAGAGTGGCGGCC 768 consensus_9302#3 GGCACCGAATGATGAAGCCGCCCAAGGACAAATACTTCCACCACGAGGAGAGTGGCGGCC 541 consensus_9302#2 GGCACCGAATGATGAAGCCGCCCAAGGACAAATACTTCCACCACGAGGAGAGTGGCGGCC 832 consensus_9302#1 ACCGCCGGACGAAGGAGCTGAGCGAGCTGGAGAAGGAGGCACGGGCGAACGAGTCGCGGT 780 consensus_9302#4 ------------------------------------------------------------ consensus_9302#0 GGCTAGGGGTGTACGGAGCGTCCGGGCTGTCGAAATCTCCCTCGAACGGGTCGGAGGCTG 828 consensus_9302#3 GGCTAGGGGTGTACGGAGCGTCCGGGCTGTCGAAATCACCCTCCAACGGGTCGGAAGCTG 601 consensus_9302#2 GGCTAGGGGTGTACGGAGCGTCCGGGCTGTCGAAATCTCCCTCGAACGGGTCGGAGGCTG 892 consensus_9302#1 GCATCGAGCTGACCGCGAACTACAACACGCTCAGCTCGGAGCGCAAGAAGCTGCAGGACG 840 consensus_9302#4 ------------------------------------------------------------ consensus_9302#0 GGCGTGTTGGGAACAAAAACGATGAACAGTGCAGCGTCATGTGAATGAGAGTGGGCGATG 888 consensus_9302#3 GGCGTGTTGGGAACAAAAAAGATGAACAGTGTAGCGTCATGTGAATGAGGGTGGACGATG 661 consensus_9302#2 GGCGTGTTGGGAAAAAAAACGATGAACAGTGCAGC-TCATGTGAATTAGAGTGGGCGATG 951 consensus_9302#1 AGC-TGAGGGAGGCGGACAAGGAGTCGGACAAGCTGCGCCGCACGTTCGAGAAGATG-CG 898 consensus_9302#4 ------------------------------------------------------------ consensus_9302#0 TTGGGCGCAGTAGAACAAGTAAGCGGTTTGGTTCCTTTTTGCATTCAGTGTTAAAGACCG 948 consensus_9302#3 TTGTGCGCAGTAGAACGAGTAAGCGGTTTGGTTCCTTTTTGCATTCAGTGTTAAAGACCG 721 consensus_9302#2 TTGGG------------------------------------------------------- 956 consensus_9302#1 CAAGGACTACGAGCACGAGACGCTGGTGCGCGTGGACCTGGAGAACAACATACAGAGCCT 958 consensus_9302#4 ------------------------------------------------------------ consensus_9302#0 TAGTCAGTCGTTGTGTCATTTTGTACGTAAAAATGTAAACTCCAAACGACACGAGAAGTA 1008 consensus_9302#3 TAGTCAGTCGTTGTGTCATTTTGTACGTAAAAATGTAAACTCCAAACGACACGAGAAGTA 781 consensus_9302#2 ------------------------------------------------------------ consensus_9302#1 GCGGGAGGAGCTCACGTTCAAGGAGCAGGTGCACAGTCAGGAGCTGAGCGAGAGCAAGCT 1018 consensus_9302#4 ------------------------------------------------------------ consensus_9302#0 CACGAGGAGAAGAAGCTTTAGTTTCAACGTTATATAGTCAATTGTATCGATCAATAAATG 1068 consensus_9302#3 CACGAGGAGAAGAAGCTTTAGTTTCAACGTTATATAGTCAATTGTATCGATCAATAAATG 841 consensus_9302#2 ------------------------------------------------------------ consensus_9302#1 GCGCCGGCAGAGCGAGATCAGCGAGATCGACGGCTTCCTGATGGAGCAGTACGAGACGAA 1078 consensus_9302#4 ------------------------------------------------------------ consensus_9302#0 CATGCTAAAGATCAGTCTTGTTTGTCTTTTAGCCTAAAATGAAAAAA---- 1115 consensus_9302#3 CATGCTAAAGATCAAAAAAAAAAA------AAAAAAAAAAGGGCACATGTG 886 consensus_9302#2 --------------------------------------------------- consensus_9302#1 GCTGCAGCAGACGCTGC---------------------------------- 1095 consensus_9302#4 --------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||