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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9302#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1115 fasta sequence
[TGCGGTTGAATCGGGAGGAGATATCGGACCTGTT-CGAGGGACGCATCCGGGCGCTGGAGGAGCGGCTGGTGCTGGAGCGCACCCGGTACGACGAGGAGAAGGCCAAGCTCGAGCAGCAGCTGGACGGGATGCGGAACGAGATGGCGGTGCAGCTGAAGGACTACCAGGATCTGATGGACATAAAGATTTCGCTCGACATGGAGATAGCGGCGTACGATAAGCTGCTGTCGCCGGAGGAAACGCGCCTCAACATTACGCCGAACGTGACGAGCACGAGCACCGGCGGTAGTTCCGCATTCACGTCCAGCTCGCGACTGTTTCGAACGCCGTCGCTGAAGCGCAAGCGC-AACAATCTGGACGAATCGATCGACTACTCGGTGGTGACGTCGGCCAAGGGGGACATCGAGGTGACGGAGTGTGATCCCGAGGGACGGTTCGTGCGCATCGCTAACAAGTCCAAGCAGGAGTACGCGCTGGCCGGCTGGCAGTTGA-TCCGGCGGCCAGTGGATGGGGCCGAGGTTAGCTATCGCTTCCCAAAGTCGGCCAAAATCGAGGGCAACGGGATGGTGACGGTTTGGGCCACGGTGGCAAACAGGAAGCCGGATCCACCGACGGATTTGGTGATGAAGGGTGCCCTCTGGACGGTGACCGATGCCATGTCGACGGTGCTGGTGAACGAGGAGGGTGAAGAGATGGCGCTGGTCGAACGGCACCGAATGATGAAGCCGCCCAAGGACAAATACTTCCACCACGAGGAGAGTGGCGGCCGGCTAGGGGTGTACGGAGCGTCCGGGCTGTCGAAATCTCCCTCGAACGGGTCGGAGGCTGGGCGTGTTGGGAACAAAAACGATGAACAGTGCAGCGTCATGTGAATGAGAGTGGGCGATGTTGGGCGCAGTAGAACAAGTAAGCGGTTTGGTTCCTTTTTGCATTCAGTGTTAAAGACCGTAGTCAGTCGTTGTGTCATTTTGTACGTAAAAATGTAAACTCCAAACGACACGAGAAGTACACGAGGAGAAGAAGCTTTAGTTTCAACGTTATATAGTCAATTGTATCGATCAATAAATGCATGCTAAAGATCAGTCTTGTTTGTCTTTTAGCCTAAAATGAAAAAA]
[+] EMBL CNS094AR [TGCGGTTGAATCGGGAGGAGATATCGGACCTGTT CGAGGGACGCATCCGGGCGCTGGAGGAGCGGCTGGTGCTGGAGCGCACCCGGTACGACGAGGAGAAGGCCAAGCTCGAGCAGCAGCTGGACGGGATGCGGAACGAGATGGCGGTGCAGCTGAAGGACTACCAGGATCTGATGGACATAAAGATTTCGCTCGACATGGAGATAGCGGCGTACGATAAGCTGCTGTCGCCGGAGGAAACGCGCCTCAACATTACGCCGAACGTGACGAGCACGAGCACCGGCGGTAGTTCCGCATTCACGTCCAGCTCGCGACTGTTTCGAACGCCGTCGCTGAAGCGCAAGCGCAAACAATCTGGACGAATCGATCGACTACTCGGTGGTGACGTCGGCCAAGGGGGACATCGAGGTGACGGAGTGTGATCCCGAGGGACGGTTCGTGCGCATCGCTAACAAGTCCAAGCAGGAGTACGCGCTGGCCGGCTGGCAGTTGA TCCGGCGGCCAGTGGATGGGGCCGAGGTTAGCTATCGCTTCCCAAAGTCGGCCAAAATCGAGGGCAACGGGATGGTGACGGTTTGGGCCACGGTGGCAAACAGGAAGCCGGATCCACCGACGGATTTGGTGATGAAGGGTGCCCTCTGGACGGTGACCGATGCCATGTCGACGGTGCTGGTGAACGAGGAGGGTGAAGAGATGGCGCTGGTCGAACGGCACCGAATGATGAAGCCGCCCAAGGACAAATACTTCCACCAC ]
[+] EMBL CNS0965I [ CCTGTTACGAGGGACGAATCCGGGCGCTGGAGGAGCGGCTGGTGCTGGAGCGCACCCGGTACGACGAGGAGAAGGCCAAGCTCGAGCAGCAGCTGGACGGGATGCGGAACGAGATGGCGGTGCAGCTGAAGGACTACCAGGATCTGATGGACATAAAGATTTCGCTCGACATGGAGATAGCGGCGTACGATAAGCTGCTGTCGTCGGAGGAAACGCGCCTCAACATTACGCCGAACGTGACGAGCACGAGCACCGGCGGTAGTTCCGCATTCACGTCCAGCTCGCGACTGTTTCGAACGCCGTCGCTGAAGCGCAAGCCA AACAATCTGGACGAATCGATCGACTACTCGGTGGTGACGTCGGCCAAGGGGGACATCGAGGTGACGGAGTGTGATCCCGAGGGACGGTTCGTGCGCATCGCTAACAAGTCCAAGCAGGAGTACGCGCTGGCCGGCTGGCAGTTGA TCCGGCGGCCAGTGGATGGGGCCGAGGTTAGCTATCGCTTCCCAAAGTCG ]
[-] EMBL CNS0965J [ AGCAGCAGCTGGACGGGATGCGGAACGAGATGGCGGTGCAGCTGAAGGACTACCAGGATCTGATGGACATAAAGATTTCGCTCGACATGGAGATAGCGGCGTACGATAAGCTGCTGTCGTCGGAGGAAACGCGCCTCAACATTACGCCGAACGTGACGAGCACGAGCACCGGCGGTAGTTCCGCATTCACGTCCAGCTCGCGACTGTTTCGAACGCCGTCGCTGAAAGGCAAGCGC AACAATCTGGACGAATCGATCGACTACTCGGTGGTGACGTCGGCCAAGGGGGACATCGAGGTGACGGAGTGTGATCCCGAGGGACGGTTCGTGCGCATCGCTAACAAGTCCAAGCAGGAGTACGCGCTGGCCGGCTGGCAGTTGA TCCGGCGGCCAGTGGATGGGGCCGAGGTTAGCTATCGCTTCCCAAAGTCGGCCAAAATCGAGGGCAACGGGATGGTGACGGTTTGGGCCACGGTGGCAAACAGGAAGCCGGATCCACCGACGGATTTGGTGATGAAGGGTGCCCTCTGGACGGTGACCGATGCCATGTCGACGGTGCTGTTGAACTTTTAGGGTGAAGAGATGGCGCTGGTCGAACGGCACCGAATGATGAAGCCGCCCAAGGACAAATACTTCCACCACGAGGAGAGTGGCGGCCGGCTAGGGGTGTACGGAGCGTCCGGGCTGTCGAAATCTCCCTCGAACGGGTCGGAGGCTGGGCGTGTTGGGAACAAAAACGATGAACAGTGCAGCGTCATGTGAATGAGAGTGGGCGATGTTGGGCGCAGTAGAACAAGTAAGCGGTTTGGTTCCTTTTTGCATTCAGTGCTCCAGACCGTAGTCAGTCGTTGTGTCATTTTGTACGTAAAAATGTAAACTC ]
[-] EMBL CNS094AS [ TCGCCGGAGGAAACGCGCCTCAACATTACGCCGAACGTGACGAGCACGAGCACCGGCGGTAGTTCCGCATTCACGTCCCGCTCGCGACTGTTTCGAACGCCGTCGCTGAAGCGCAAGCGC AACAATCTGGACGAATCGATCGACTACTCGGTGGTGACGTCGGCCAAGGGGGACATCGAGGTGACGGAGTGTGATCCCGAGGGACGGTTCGTGCGCATCGCTAACAAGTCCAAGCAGGAGTACGCGCTGGCCGGCTGGCAGTTGA TCCGGCGGCCAGTGGATGGGGCCGAGGTTAGCTATCGCTTCCCAAAGTCGGCCAAAATCGAGGGCAACGGGATGGTGACGGTTTGGGCCACGGTGGCAAACAGGAAGCCGGATCCACCGACGGATTTGGTGATGAAGGGTGCCCTCTGGACGGTGACCGATGCCATGTCGACGGTGCTGGTGAACGAGGAGGGTGAAGAGATGGCGCTGGTCGAACGGCTCCGAATGATGAAGCCGCCCAAGGACAAATACTTCCACCACGAGGAGAGTGGCGGCCGGCTAGGGGTGTACGGAGCGTCCGGGCTGTCGAAATCTCCCTCGAACGGGTCGGAGGCTGGGCGTGTTGGGAACAAAAACGATGAACAGTGCAGCGTCATGTGAATGAGAGTGGGCGATGTTGGGCGCAGTAGAACAAGTAAGCGGTTTGGTTCCTTTTTGCATTCAGTGTTAAAGACCGTAGTCAGTCGTTGTGTCATTTTGTACGTAAAAATGTAAACTCCAAACGACACGAGAAGTACACGAGGAGAAGAAGCTTTAGTTTCAACGTTATATAGTCAATTGTATCGATCAATAAATGCATGCTAAAGATCAGTCTTGTTTGTCTTTTAGCCTAAAATGAAAAAA]
[-] EMBL CNS08HNZ [ cCCAGCTCGCCACTGTTTCGAACGCCGTCGCTGAAGCGCAAGCGC AACAATCTGGACGAATCGATCGACTACTCGGTGGTGACGTCGGCCAAGGGGGACATCGAGGTGACGGAGTGTGATCCCGAGGGACGGTTCGTGCGCATCGCTAACAAGTCCAAGCAGGAGTACGCGCTGGCCGGCTGGCAGTTGATTCCGGCGGCCAGTGGATGGGGCCGAGGTTAG TATCGCTTCCCAAAGTCGGCCAAAATCGAGGGCAACGGGATGGTGACGGTTTGGGCCACGGTGGCAAACAGGAAGCCGGATCCACCGACGGATTTGGTGATGAAGGGTGCCCTCTGGACGGTGACCGATGCCATGTCGACGGTGCTGGTGAACGAGGAGGGTGAAGAGATGGCGCTGGTCGAACGGCACCGAATGATGAAGCCGCCCAAGGACAAATACTTCCACCACGAGGAGAGTGGCGGCCGGCTAGGGGTGTACGGAGCGTCCGGGCTGTCGAAATCTCCCTCGAACGGGTCGGAGGCTGGGCGTGTTGGGAACAAAAACGATGAACAGTGCAGCGTCATGTGAATGAGAGTGGGCGATGTTGGGCGCAGTAGAACAAGTAAGCGGTTTGGTTCCTTTTTGCATTCAGTGTTAAAGACCGTAGTCAGTCGTTGTGTCATTTTGTACGTAAAAATGTAAACTCCAAACGACACGAGAAGTACACGAGGAGAAGAAGCTTTAGTTTCAACGTTATATAGTCAATTGTATC ]
consensusID : consensus_9302#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1095 fasta sequence
[CCGCGGACGCGTGGGTGCTGCAGAAGTGTGTGAAGCATCATATCAGTACCAAACCTTTAAACAGTTAAAACAGTTAAAAAAAACTCACAAATGTGACGATCGAGTTGAGTGTTTTCCTTTTTAATCACTTTTAGTAACAAAAACAAACTCCTGAATTCAGACAAACAAAAGTAATTCGCATCAAAATACGAGTGATCGTGCGTTAGCCGACGCGTACTTTCTCGTTGAGGTTAATCCCGCTGGGACGCTTCCATTTTTCCACACCAACAATGTCACAAAAAATGAAGAAACCGGCCGCCAAGCCATCCTCCACCACCGCGACCAACAATGGCAACACGGCCCATACGCCCAGCGGTGCCCAGTCCGTGTCGTCGTCCGCCTCGACCGTTTCGAGCGCCTCGGAATCGTCGGAAACGGCCCTCAGCCCGTCGCGCCGCAGCCGACTGCACGAAAAGAACAGCCTCATGAACCTGAACGATCGGCTGGCCTGTTACATCGAGCGGGTGCGCTACCTGGAGCAGGAGAACTCACGCCTCTCGCTCGAGCTGACCACCTTCCAGGAGACGGCCGCCCGGGAAGTGTCCGGGCTGAAGTCGATCTACGAGCACGAGCTGGCGGACGCCCGCAAGCTGCTCGACGAGACGGCCCGCGACAAGGCAAAGGTCGAGATCGACGCGAAGCGCTACTGGGAGGAGAACGAGCAGCTGCGCACGAAGCTGAACCGCCGGACGAAGGAGCTGAGCGAGCTGGAGAAGGAGGCACGGGCGAACGAGTCGCGGTGCATCGAGCTGACCGCGAACTACAACACGCTCAGCTCGGAGCGCAAGAAGCTGCAGGACGAGCTGAGGGAGGCGGACAAGGAGTCGGACAAGCTGCGCCGCACGTTCGAGAAGATGCGCAAGGACTACGAGCACGAGACGCTGGTGCGCGTGGACCTGGAGAACAACATACAGAGCCTGCGGGAGGAGCTCACGTTCAAGGAGCAGGTGCACAGTCAGGAGCTGAGCGAGAGCAAGCTGCGCCGGCAGAGCGAGATCAGCGAGATCGACGGCTTCCTGATGGAGCAGTACGAGACGAAGCTGCAGCAGACGCTGC]
[+] EMBL BM605181 [CCGCGGACGCGTGGGTGCTGCAGAAGTGTGTGAAGCATCATATCAGTACCAAACCTTTAAACAGTTAAAACAGTTAAAAAAAACTCACAAATGTGACGATCGAGTTGAGTGTTTTCCTTTTTAATCACTTTTAGTAACAAAAACAAACTCCTGAATTCAGACAAACAAAAGTAATTCGCATCAAAATACGAGTGATCGTGCGTTAGCCGACGCGTACTTTCTCGTTGAGGTTAATCCCGCTGGGACGCTTCCATTTTTCCACACCAACAATGTCACAAAAAATGAAGAAACCGGCCGCCAAGCCATCCTCCACCACCGCGACCAACAATGGCAACACGGCCCATACGCCCAGCGGTGCCCAGTCCGTGTCGTCGTCCGCCTCGACCGTTTCGAGCGCCTCGGAATCGTCGGAAACGGCCCTCAGCCCGTCGCGCCGCAGCCGACTGCACGAAAAGAACAGCCTCATGAACCTGAACGATCGGCTGGCCTGTTACATCGAGC ]
[+] EMBL BM598368 [ ccgtacagaTGCTGCAGAAGTGTGTGAAGCATCATATCAGTACCAAACCTTTAAACAGTTAAAACAGTTAAAAAAAACTCACAAATGTGACGATCGAGTTGAGTGTTTTCCTTTTTAATCACTTTTAGTAACAAAAACAAACTCCTGAATTCAGACAAACAAAAGTAATTCGCATCAAAATACGAGTGATCGTGCGTTAGCCGACGCGTACTTTCTCGTTGAGGTTAATCCCGCTGGGACGCTTCCATTTTTCCACACCAACAATGTCACAAAAAATGAAGAAACCGGCCGCCAAGCCATCCTCCACCACCGCGACCAACAATGGCAACACGGCCCATACGCCCAGCGGTGCCCAGTCCGTGTCGTCGTCCGCCTCGACCGTTTCGAGCGCCTCGGAATCGTCGGAAACGGCCCTCAGCCCGTCGCGCCGCAGCCGACTGCACGAAAAGAACAGCCTCATGAACCTGAACGATCGGCTGGCCTGTTACATCGAGCGGGTGCGCTACCTGGAGCAGGAGAACTCACGCCTCTCGCTCGAGCTGACCACCTTCCAGGAGACGGCCGCCCGGGAAGTGTCCGGGCTGAAGTCGATCTACGAGCACGAGCTGGCGGACGCCCGCAAGCTGCTCGACGAGACGGCCCGCGACAAGGCAAAGGTCGAGATCGACGCGAAGCGCTACTGGGAGG ]
[+] EMBL BM584846 [ ccgGTGAAGCATCATATCAGTACCAAACCTTTAAACAGTTAAAACAGTTAAAAAAAACTCACAAATGTGACGATCGAGTTGAGTGTTTTCCTTTTTAATCACTTTTAGTAACAAAAACAAACTCCTGAATTCAGACAAACAAAAGTAATTCGCATCAAAATACGAGTGATCGTGCGTTAGCCGACGCGTACTTTCTCGTTGAGGTTAATCCCGCTGGGACGCTTCCATTTTTCCACACCAACAATGTCACAAAAAATGAAGAAACCGGCCGCCAAGCCATCCTCCACCACCGCGACCAACAATGGCAACACGGCCCATACGCCCAGCGGTGCCCAGTCCGTGTCGTCGTCCGCCTCGACCGTTTCGAGCGCCTCGGAATCGTCGGAAACGGCCCTCAGCCCGTCGCGCCGCAGCCGACTGCACGAAAAGAACAGCCTCATGAACCTGAACGATCGGCTGGCCTGTTACATCGAGC GGTGCGCTACCTGGAGCAGGAGAACTCACGCCTCTCGCTCGAGCTGACCACCTTCCAGGAGACGGCCGCCCGGGAAGTGTCCGGGCTGAAGTCGATCTACGAGCACGAGCTGGCGGACGCCCGCAAGCTGCTCGACGAGACGGCCCGCGACAAGGCAAAGGTCGAG ]
[+] EMBL BM588777 [ ccgCAAATGTGACGATCGAGTTGAGTGTTTTCCTTTTTAATCACTTTTAGTAACAAAAACAAACTCCTGAATTCAGACAAACAAAAGTAATTCGCATCAAAATACGAGTGATCGTGCGTTAGCCGACGCGTACTTTCTCGTTGAGGTTAATCCCGCTGGGACGCTTCCATTTTTCCACACCAACAATGTCACAAAAAATGAAGAAACCGGCCGCCAAGCCATCCTCCACCACCGCGACCAACAATGGCAACACGGCCCATACGCCCAGCGGTGCCCAGTCCGTGTCGTCGTCCGCCTCGACCGTTTCGAGCGCCTCGGAATCGTCGGAAACGGCCCTCAGCCCGTCGCGCCGCAGCCGACTGCACGAAAAGAACAGCCTCATGAACCTGAACGATCGGCTGGCCTGTTACATCGAGCGGGTGCGCTACCTGGAGCAGGAGAACTCACGCCTCTCGCTCGAGCTGACCACCTTCCAGGAGACGGCCGCCCGGGAAGTGTCCGGGCTGAAGTCGATCTACGAGCACGAGCTGGCGGACGCCCGCAAGCTGCTCGACGAGACGGCCCGCGACAAGGCAAAGGTCGAGATCGACGCGAAGCGCTACTGGGAGGAGAACGAGCAGCTGCGCACGAAGCTGAACCGCCGGACGAAGGAGCTGAGCGAGCTGGAGAAGGAG ]
[+] EMBL BM606954 [ ccgGCCCGTCGCGCCGCAGCCGACTGCACGAAAAGAACAGCCTCATGAACCTGAACGATCGGCTGGCCTGTTACATCGAGCGGGTGCGCTACCTGGAGCAGGAGAACTCACGCCTCTCGCTCGAGCTGACCACCTTCCAGGAGACGGCCGCCCGGGAAGTGTCCGGGCTGAAGTCGATCTACGAGCACGAGCTGGCGGACGCCCGCAAGCTGCTCGACGAGACGGCCCGCGACAAGGCAAAGGTCGAGATCGACGCGAAGCGCTACTGGGAGGAGAACGAGCAGCTGCGCACGAAGCTGAACCGCCGGACGAAGGAGCTGAGCGAGCTGGAGAAGGAGGCACGGGCGAACGAGTCGCGGTGCATCGAGCTGACCGCGAACTACAACACGCTCAGCTCGGAGCGCAAGAAGCTGCAGGACGAGCTGAGGGAGGCGGACAAGGAGTCGGACAAGCTGCGCCGCACGTTCGAGAAGATGCGCAAGGACTACGAGCACGAGACGCTGGTGCGCGTGGACCTGGAGAACAACATACAGAGCCTGCGGGAGGAGCTCACGTTCAAGGAGCAGGTGCACAGTCAGGAGCTGAGCGAGAGCAAGCTGCGCCGGCAGAGCGAGATCAGCGAGATCGACGGCTTCCTGATGGAGCAGTACGAGACGAAGCTGCAGCAGACGCTGC]
consensusID : consensus_9302#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 956 fasta sequence
[AATCTCGCACTTCATTACAGATGCTGCAGAAGTGTGTGAAGCATCATATCAGTAGCGAACGTTTGAACAGTTAAAACAGTTAAAAAACTCACAAATGTGACGATCGAGTTTAGTGTTTTCCTTTTTAATCAGTTTTAGTAACAAAAACAAACTCCTGAATTCAGACAAACAAAAGTAATTCGCATCAAAATACGAGTGATCGTGCGTTAGGGACGCGTACTTTCTCGTTGAGGTTAATCCCGCTGGGACGCTTCCATTTTTCCACACCACCAAACTGCGCACCAAAAATGTCACAGAAAATGAAGAAACCGGCCGCCAAGCCATCCTCCACCACCGCAACCAACAATGGCAACACGGCCCATACGCCCAGCTCGCGACTGTTTCGAACGCCGTCGCTGAAGCGCAAGCGCAAACAATCTGGACGAATCGATCGACTACTCGGTGGTGACGTCGGCCAAGGGGGACATCGAGGTGACGGAGTGTGATCCCGAGGGACGGTTCGTGCGCATCGCTAACAAGTCCAAGCAGGAGTACGCGCTGGCCGGCTGGCAGTTGATCCGGCGGCCAGTGGATGGGGCCGAGGTTAGCTATCGCTTCCCAAAGTCGGCCAAAATCGAGGGCAACGGGATGGTGACGGTTTGGGCCACGGTGGCAAACAGGAAGCCGGATCCACCGACGGATTTGGTGATGAAGGGTGCCCTCTGGACGGTGACCGATGCCATGTCGACGGTGCTGGTGAACGAGGAGGGTGAAGAGATGGCGCTGGTCGAACGGCACCGAATGATGAAGCCGCCCAAGGACAAATACTTCCACCACGAGGAGAGTGGCGGCCGGCTAGGGGTGTACGGAGCGTCCGGGCTGTCGAAATCTCCCTCGAACGGGTCGGAGGCTGGGCGTGTTGGGAAAAAAAACGATGAACAGTGCAGCTCATGTGAATTAGAGTGGGCGATGTTGGG]
[+] EMBL CNS08HNY [AATCTCGCACTTCATTACAGATGCTGCAGAAGTGTGTGAAGCATCATATCAGTAGCGAACGTTTGAACAGTTAAAACAGTTAAAAAACTCACAAATGTGACGATCGAGTTTAGTGTTTTCCTTTTTAATCAGTTTTAGTAACAAAAACAAACTCCTGAATTCAGACAAACAAAAGTAATTCGCATCAAAATACGAGTGATCGTGCGTTAGGGACGCGTACTTTCTCGTTGAGGTTAATCCCGCTGGGACGCTTCCATTTTTCCACACCACCAAACTGCGCACCAAAAATGTCACAGAAAATGAAGAAACCGGCCGCCAAGCCATCCTCCACCACCGCAACCAACAATGGCAACACGGCCCATACGCCCAGCTCGCGACTGTTTCGAACGCCGTCGCTGAAGCGCAAGCGCAAACAATCTGGACGAATCGATCGACTACTCGGTGGTGACGTCGGCCAAGGGGGACATCGAGGTGACGGAGTGTGATCCCGAGGGACGGTTCGTGCGCATCGCTAACAAGTCCAAGCAGGAGTACGCGCTGGCCGGCTGGCAGTTGATCCGGCGGCCAGTGGATGGGGCCGAGGTTAGCTATCGCTTCCCAAAGTCGGCCAAAATCGAGGGCAACGGGATGGTGACGGTTTGGGCCACGGTGGCAAACAGGAAGCCGGATCCACCGACGGATTTGGTGATGAAGGGTGCCCTCTGGACGGTGACCGATGCCATGTCGACGGTGCTGGTGAACGAGGAGGGTGAAGAGATGGCGCTGGTCGAACGGCACCGAATGATGAAGCCGCCCAAGGACAAATACTTCCACCACGAGGAGAGTGGCGGCCGGCTAGGGGTGTACGGAGCGTCCGGGCTGTCGAAATCTCCCTCGAACGGGTCGGAGGCTGGGCGTGTTGGGAAAAAAAACGATGAACAGTGCAGCTCATGTGAATTAGAGTGGGCGATGTTGGG]
consensusID : consensus_9302#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 886 fasta sequence
[TCGTCGGAGGAAACGCGCCTCAACATTACGCCGAACGTGACGAGCACGAGCACCGGCGGTGGCTCCGCATTCACGTCCAGCTCGCGACTGTTTCGGACGCCGTCGCTGAAGCGCAACGCGAACAATCTGGACGAATCGATCGACTACTCGGTGGTGACGTCGGCCAAGGGGGACATCGAGGTGACGGAGTGTGATCCCGAGGGACGGTTCGTGCGCATCGCCAACAAGTCCAAGCAGGAGTACGCGCTGGCCGGCTGGCAGTTGATCCGGCGGCCAGTGGATGGGGCCGAGGTTAGCTATCGCTTCCCAAAGTCG-GCCAAAATCGAGGGCAACGGGATGGTGACGGTTTGGGCCACGGTGGCAAACCGGAAGCCGGATCCACCGACGGATTTGGTGATGAAGGGTGCCCTCTGGACGGTGACTGATGCCATGTCGACGGTGCTGGTGAACGAGGAGGGTGAAGAGATGGCGCTGGTCGAACGGCACCGAATGATGAAGCCGCCCAAGGACAAATACTTCCACCACGAGGAGAGTGGCGGCCGGCTAGGGGTGTACGGAGCGTCCGGGCTGTCGAAATCACCCTCCAACGGGTCGGAAGCTGGGCGTGTTGGGAACAAAAAAGATGAACAGTGTAGCGTCATGTGAATGAGGGTGGACGATGTTGTGCGCAGTAGAACGAGTAAGCGGTTTGGTTCCTTTTTGCATTCAGTGTTAAAGACCGTAGTCAGTCGTTGTGTCATTTTGTACGTAAAAATGTAAACTCCAAACGACACGAGAAGTACACGAGGAGAAGAAGCTTTAGTTTCAACGTTATATAGTCAATTGTATCGATCAATAAATGCATGCTAAAGATCAAAAAAAAAAAAAAAAAAAAAGGGCACATGTG]
[+] EMBL CNS08VI3 [TCGTCGGAGGAAACGCGCCTCAACATTACGCCGAACGTGACGAGCACGAGCACCGGCGGTGGCTCCGCATTCACGTCCAGCTCGCGACTGTTTCGGACGCCGTCGCTGAAGCGCAACGCGAACAATCTGGACGAATCGATCGACTACTCGGTGGTGACGTCGGCCAAGGGGGACATCGAGGTGACGGAGTGTGATCCCGAGGGACGGTTCGTGCGCATCGCCAACAAGTCCAAGCAGGAGTACGCGCTGGCCGGCTGGCAGTTGATCCGGCGGCCAGTGGATGGGGCCGAGGTTAGCTATCGCTTCCCAAAGTCG GCCAAAATCGAGGGCAACGGGATGGTGACGGTTTGGGCCACGGTGGCAAACCGGAAGCCGGATCCACCGACGGATTTGGTGATGAAGGGTGCCCTCTGGACGGTGACTGATGCCATGTCGACGGTGCTGGTGAACGAGGAGGGTGAAGAGATGGCGCTGGTCGAACGGCACCGAATGATGAAGCCGCCCAAGGACAAATACTTCCACCACGAGGAGAGTGGCGGCCGGCTAGGGGTGTACGGAGCGTCCGGGCTGTCGAAATCACCCTCCAACGGGTCGGAAGCTGGGCGTGTTGGGAACAAAAAAGATGAACAGTGTAGCGTCATGTGAATGAGGGTGGACGATGTTGTGCGCAGTAGAACGAGTAAGCGGTTTGGTTCCTTTTTGCATTCAGTGTTAAAGACCGTAGTCAGTCGTTGTGTCATTTTGTACGTAAAAATGTAAACTCCAAACGACACGAGAAGTACACGAGGAGAAGAAGCTTTAGTTTCAACGTTATATAGTCAATTGTATCGATCAATAAATGCATGCTAAAGATCAAAAAAAAAAAAAAAAAAAAAGGGCACATGTG]
[-] EMBL CNS08VI4 [ TCCAAGCAGGAGTACGCGCTGGCCCGCTGGCAGTTGATCCGGCGGCCAGTGGATGGGGCCGAGGTTAG TATCGCTTCCCAAAGTCGCGCCAAAATCGAGGGCAACGGGATGGTGACGGTTTGGGCCACGGTGGCAAACCGGAAGCCGGATCCACCGACGGATTTGGTGATGAAGGGTGCCCTCTGGACGGTTACTGATGCCATGTCGACGGTGCTGGTGAACGAGGAGGGTGAAGAGATGGCGCTGGTCGAACGGCACCGAATGATGAAGCCGCCCAAGGACAAATACTTCCACCACGAGGAAAGTGGCGGCCGGCTAGGGGTGTACGGAGCGTCCGGGCTGTCGAAATCACCCTCCAACGGGTCGGAAGCTGGGCGTGTTGGGAACAAAAACGATGAACAGTGTAGCGTCATGTGAATGAGGGTGGACGATGTTGTGCGCAGTAGAACGAGTAAGCGGTTTGGTTCCTTTTTGCATTCAGTGTTAAAGACCGTAGTCAGTCGTTGTGTCATTTTGTACGTAAAAATGTAAACTCCAAACGACACGAGAAGTACACGAGGAGAAGAAGCTTTAGTTTCAACGTTATATAGTCAATTGTATCGATCAATAAAT ]
consensusID : consensus_9302#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 648 fasta sequence
[CCGCGGACGCGTGGGTACAGATGCTGCAGAAGTGTGTGAAGCATCATATCAGTAGCGAACGTTTAAACAGTTAAAACAGTTAAAAAACCTCACAAATGTGACGATCGAGTTTAGTGTTTTCCTTTTTAATCACTTTTAGTAACAAAAACAAACTCCTGAATTCAGACAAACAAAAGTGATCGTGCGTTAGCGGACGCGTACTTTCTCGTTGAGGTTAATCCCGCTGGGACGCTTCCATTTTTCCACACCACCAAACTGCGCACCAACAATGTCACAGAAAATGAAGAAACCGGCCGCCAAGCCATCCTCCACCACCGCGACCGCCAATACCAACACGGCCCATACGCCCAGCGGTGCCCAGTCCGTGTCGTCGTCCGCCTCGACCGTTTCGAGCGCCTCGGAATCGTCGGAAACGGCCCTCAGCCCGTCGCGCCGTAGCCGACTGCACGAAAAGAACAGCCTCATGAACCTGAACGATCGGCTGGCCTGTTACATCGAGCGGGTGCGCTACCTGGAGCAGGAGAACTCACGCCTCTCGCTCGAGCTGACCACCTTCCAGGAGACGGCCGCCCGGGAAGTGTCCGGGCTGAAGTCGATCTACGAGCACGAGCTGGCGGACGCACGCAAGCTGCTCGACGAGACGGCCCG]
[+] EMBL BM604165 [CCGCGGACGCGTGGGTACAGATGCTGCAGAAGTGTGTGAAGCATCATATCAGTAGCGAACGTTTAAACAGTTAAAACAGTTAAAAAACCTCACAAATGTGACGATCGAGTTTAGTGTTTTCCTTTTTAATCACTTTTAGTAACAAAAACAAACTCCTGAATTCAGACAAACAAAAGTGATCGTGCGTTAGCGGACGCGTACTTTCTCGTTGAGGTTAATCCCGCTGGGACGCTTCCATTTTTCCACACCACCAAACTGCGCACCAACAATGTCACAGAAAATGAAGAAACCGGCCGCCAAGCCATCCTCCACCACCGCGACCGCCAATACCAACACGGCCCATACGCCCAGCGGTGCCCAGTCCGTGTCGTCGTCCGCCTCGACCGTTTCGAGCGCCTCGGAATCGTCGGAAACGGCCCTCAGCCCGTCGCGCCGTAGCCGACTGCACGAAAAGAACAGCCTCATGAACCTGAACGATCGGCTGGCCTGTTACATCGAGCGGGTGCGCTACCTGGAGCAGGAGAACTCACGCCTCTCGCTCGAGCTGACCACCTTCCAGGAGACGGCCGCCCGGGAAGTGTCCGGGCTGAAGTCGATCTAC ]
[+] EMBL BM586354 [ ccgGAAGTGTGTGAAGCATCATATCAGTAGCGAACGTTTAAACAGTTAAAACAGTTAAAAAACCTCACAAATGTGACGATCGAGTTTAGTGTTTTCCTTTTTAATCACTTTTAGTAACAAAAACAAACTCCTGAATTCAGACAAACAAAAGTGATCGTGCGTTAGCGGACGCGTACTTTCTCGTTGAGGTTAATCCCGCTGGGACGCTTCCATTTTTCCACACCACCAAACTGCGCACCAACAATGTCACAGAAAATGAAGAAACCGGCCGCCAAGCCATCCTCCACCACCGCGACCGCCAATACCAACACGGCCCATACGCCCAGCGGTGCCCAGTCCGTGTCGTCGTCCGCCTCGACCGTTTCGAGCGCCTCGGAATCGTCGGAAACGGCCCTCAGCCCGTCGCGCCGTAGCCGACTGCACGAAAAGAACAGCCTCATGAACCTGAACGATCGGCTGGCCTGTTACATCGAGCGGGTGCGCTACCTGGAGCAGGAGAACTCACGCCTCTCGCTCGAGCTGACCACCTTCCAGGAGACGGCCGCCCGGGAAGTGTCCGGGCTGAAGTCGATCTACGAGCACGAGCTGGCGGACGCACGCAAGCTGCTCGACGAGACGGCCCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9302#0 ------------------------------------------------------------
consensus_9302#3 ------------------------------------------------------------
consensus_9302#2 AATCTCGCACTTCATTACAGATGCTGCAGAAGTGTGTGAAGCATCATATCAGTAGCGAAC 60
consensus_9302#1 CCGCGGACGCGTGGGT------GCTGCAGAAGTGTGTGAAGCATCATATCAGTACCAAAC 54
consensus_9302#4 CCGCGGACGCGTGGGTACAGATGCTGCAGAAGTGTGTGAAGCATCATATCAGTAGCGAAC 60
consensus_9302#0 -----TGCGGTTGAATCGGGAGGAGATATCGGACCTGTTCGAGGGACGCATCCGGGCGCT 55
consensus_9302#3 ------------------------------------------------------------
consensus_9302#2 GTTTGAACAGTTAAAACAGTTAAAAAACTCACAAATGT--GACGATCGAGTTTAGTGTTT 118
consensus_9302#1 CTTTAAACAGTTAAAACAGTTAAAAAAAACTCACAAATGTGACGATCGAGTTGAGTGTTT 114
consensus_9302#4 GTTTAAACAGTTAAAACAGTTAAAAAAC-CTCACAAATGTGACGATCGAGTTTAGTGTTT 119
consensus_9302#0 GGAGGAGCGGCTGGTGCTGGAGCGCACCCGGTACGACGAGGAGAAGGCCAAGCTCGAGCA 115
consensus_9302#3 ------------------------------------------------------------
consensus_9302#2 TCCTTTTTAATCAGTTTTAGTAACAAAAACAAACTCCTGAATTCAGACAAACAAAAGTAA 178
consensus_9302#1 TCCTTTTTAATCACTTTTAGTAACAAAAACAAACTCCTGAATTCAGACAAACAAAAGTAA 174
consensus_9302#4 TCCTTTTTAATCACTTTTAGTAACAAAAACAAACTCCTGAATTCAGACAAACAAAAGT-- 177
consensus_9302#0 GCAGCTGGACGGGATGCGGAACGAGATGGCGGT-GCAGCTGAAGGACTACCAGGATCTGA 174
consensus_9302#3 ------------------------------------------------------------
consensus_9302#2 TTCGCATCAAAATACGAGTGATCGTGCGTTAGG-GACGCGTACTTTCTCGTTGAGGTTAA 237
consensus_9302#1 TTCGCATCAAAATACGAGTGATCGTGCGTTAGCCGACGCGTACTTTCTCGTTGAGGTTAA 234
consensus_9302#4 -------------------GATCGTGCGTTAGCGGACGCGTACTTTCTCGTTGAGGTTAA 218
consensus_9302#0 TGGACATAAAGATTTCGCTCGACATGGAGATAGCGGCGTACGATAAGCTGCTGTCGCCGG 234
consensus_9302#3 -----------------------------------------------------TCGTCGG 7
consensus_9302#2 TCCCGCTGGGACGCTTCCATTTTTCCACACCACCAAACTGCGCACCAAAAATGTCACAGA 297
consensus_9302#1 TCCCGCTGGGACGCTTCCATTTTTCCACACCA---------------ACAATGTCACAAA 279
consensus_9302#4 TCCCGCTGGGACGCTTCCATTTTTCCACACCACCAAACTGCGCACCAACAATGTCACAGA 278
**
consensus_9302#0 AGGAAACGCGCCTCAACATTACGCCGAACGTGACGAGCACGAGCACCGGCGGTAGTTCCG 294
consensus_9302#3 AGGAAACGCGCCTCAACATTACGCCGAACGTGACGAGCACGAGCACCGGCGGTGGCTCCG 67
consensus_9302#2 AAATGAAGAAACCGGCCGCCAAGCCATCCTCCACCACCGCAACCAACAATGGCAACACGG 357
consensus_9302#1 AAATGAAGAAACCGGCCGCCAAGCCATCCTCCACCACCGCGACCAACAATGGCAACACGG 339
consensus_9302#4 AAATGAAGAAACCGGCCGCCAAGCCATCCTCCACCACCGCGACCGCCAATACCAACACGG 338
* * * * * * *** * ** * * * * * * * *
consensus_9302#0 CATTCACGTCCAGCTCGCGACTGTTTCGAACGCCGTCGCTGAAGCGCAAGCGCAA-CAAT 353
consensus_9302#3 CATTCACGTCCAGCTCGCGACTGTTTCGGACGCCGTCGCTGAAGCGCAACGCGAA-CAAT 126
consensus_9302#2 CCCATACGCCCAGCTCGCGACTGTTTCGAACGCCGTCGCTGAAGCGCAAGCGCAAACAAT 417
consensus_9302#1 CCCATACGCCCAGCG-GTGCCCAGTCCG--TGTCGTCGTC----CGC---CTCGACCGTT 389
consensus_9302#4 CCCATACGCCCAGCG-GTGCCCAGTCCG--TGTCGTCGTC----CGC---CTCGACCGTT 388
* *** ***** * * * * ** * ***** *** * * *
consensus_9302#0 CTGGACGAATCGATCGACTACTCGGTGGTGACG-TCGGCCAAGGGGGACAT---CGAGGT 409
consensus_9302#3 CTGGACGAATCGATCGACTACTCGGTGGTGACG-TCGGCCAAGGGGGACAT---CGAGGT 182
consensus_9302#2 CTGGACGAATCGATCGACTACTCGGTGGTGACG-TCGGCCAAGGGGGACAT---CGAGGT 473
consensus_9302#1 TCGAGCGCCTCG---GAATCGTCGGAAACGGCCCTCAGCCCGTCGCGCCGCAGCCGACTG 446
consensus_9302#4 TCGAGCGCCTCG---GAATCGTCGGAAACGGCCCTCAGCCCGTCGCGCCGTAGCCGACTG 445
* ** *** ** * **** * * ** *** * * * ***
consensus_9302#0 GACGGAGTGTG-ATCCCGAGGGACGGTTCGTGCGCATCGCTAACAAGTCCAAGCAGGAGT 468
consensus_9302#3 GACGGAGTGTG-ATCCCGAGGGACGGTTCGTGCGCATCGCCAACAAGTCCAAGCAGGAGT 241
consensus_9302#2 GACGGAGTGTG-ATCCCGAGGGACGGTTCGTGCGCATCGCTAACAAGTCCAAGCAGGAGT 532
consensus_9302#1 CACGAAAAGAACAGCCTCATGAAC---CTGAACGATCGGCTGGCCTGTTACATCGAGCGG 503
consensus_9302#4 CACGAAAAGAACAGCCTCATGAAC---CTGAACGATCGGCTGGCCTGTTACATCGAGCGG 502
*** * * * ** * * ** * ** ** * ** * * * *
consensus_9302#0 ACGCGCTGGCCGGCTGGCAGTTGATCCGGCGGCCAGTGGATGGGGCCGAGGTTAGCTATC 528
consensus_9302#3 ACGCGCTGGCCGGCTGGCAGTTGATCCGGCGGCCAGTGGATGGGGCCGAGGTTAGCTATC 301
consensus_9302#2 ACGCGCTGGCCGGCTGGCAGTTGATCCGGCGGCCAGTGGATGGGGCCGAGGTTAGCTATC 592
consensus_9302#1 GTGCGCTACCTGG--AGCAGGAGAACTCACG-CCTCTCGCTCGAGCTGA------CCACC 554
consensus_9302#4 GTGCGCTACCTGG--AGCAGGAGAACTCACG-CCTCTCGCTCGAGCTGA------CCACC 553
***** * ** **** ** * ** ** * * * * ** ** * * *
consensus_9302#0 GCTTCCCAAAGTCGGCCAAAATCGAGGGCAACGGGATGGTGACGGTTTGGGCCACGGTGG 588
consensus_9302#3 GCTTCCCAAAGTCGGCCAAAATCGAGGGCAACGGGATGGTGACGGTTTGGGCCACGGTGG 361
consensus_9302#2 GCTTCCCAAAGTCGGCCAAAATCGAGGGCAACGGGATGGTGACGGTTTGGGCCACGGTGG 652
consensus_9302#1 --TTCCAGGAGACGGCCGCCCGGGAAGTGTCCGGGCTGAAGTCGATCT-----ACGAGCA 607
consensus_9302#4 --TTCCAGGAGACGGCCGCCCGGGAAGTGTCCGGGCTGAAGTCGATCT-----ACGAGCA 606
**** ** ***** ** * **** ** * ** * * ***
consensus_9302#0 CAAACAGGAAGCCGGATCCACCGACGGATTTGGTGATGAAGGGTGCCCTCTGGACGGTGA 648
consensus_9302#3 CAAACCGGAAGCCGGATCCACCGACGGATTTGGTGATGAAGGGTGCCCTCTGGACGGTGA 421
consensus_9302#2 CAAACAGGAAGCCGGATCCACCGACGGATTTGGTGATGAAGGGTGCCCTCTGGACGGTGA 712
consensus_9302#1 CGAGCTGG----CGGA--CGCCCGCAAGCTGCTCGACGAGACG-GCCCGCGACAAGGCAA 660
consensus_9302#4 CGAGCTGG----CGGA--CGCACGCAAGCTGCTCGACGAGACG-GCCCG----------- 648
* * * ** **** * * * * ** ** * ****
consensus_9302#0 CCGATGCCATGTCGACGGTGCTGGTGAACGAGGAGGGTGAAGAGATGGCGCTGGTCGAAC 708
consensus_9302#3 CTGATGCCATGTCGACGGTGCTGGTGAACGAGGAGGGTGAAGAGATGGCGCTGGTCGAAC 481
consensus_9302#2 CCGATGCCATGTCGACGGTGCTGGTGAACGAGGAGGGTGAAGAGATGGCGCTGGTCGAAC 772
consensus_9302#1 AGGTCGAGATCGACGCGAAGCGCTACTGGGAGGAGAACGAGCAGCTGCGCACGAAGCTGA 720
consensus_9302#4 ------------------------------------------------------------
consensus_9302#0 GGCACCGAATGATGAAGCCGCCCAAGGACAAATACTTCCACCACGAGGAGAGTGGCGGCC 768
consensus_9302#3 GGCACCGAATGATGAAGCCGCCCAAGGACAAATACTTCCACCACGAGGAGAGTGGCGGCC 541
consensus_9302#2 GGCACCGAATGATGAAGCCGCCCAAGGACAAATACTTCCACCACGAGGAGAGTGGCGGCC 832
consensus_9302#1 ACCGCCGGACGAAGGAGCTGAGCGAGCTGGAGAAGGAGGCACGGGCGAACGAGTCGCGGT 780
consensus_9302#4 ------------------------------------------------------------
consensus_9302#0 GGCTAGGGGTGTACGGAGCGTCCGGGCTGTCGAAATCTCCCTCGAACGGGTCGGAGGCTG 828
consensus_9302#3 GGCTAGGGGTGTACGGAGCGTCCGGGCTGTCGAAATCACCCTCCAACGGGTCGGAAGCTG 601
consensus_9302#2 GGCTAGGGGTGTACGGAGCGTCCGGGCTGTCGAAATCTCCCTCGAACGGGTCGGAGGCTG 892
consensus_9302#1 GCATCGAGCTGACCGCGAACTACAACACGCTCAGCTCGGAGCGCAAGAAGCTGCAGGACG 840
consensus_9302#4 ------------------------------------------------------------
consensus_9302#0 GGCGTGTTGGGAACAAAAACGATGAACAGTGCAGCGTCATGTGAATGAGAGTGGGCGATG 888
consensus_9302#3 GGCGTGTTGGGAACAAAAAAGATGAACAGTGTAGCGTCATGTGAATGAGGGTGGACGATG 661
consensus_9302#2 GGCGTGTTGGGAAAAAAAACGATGAACAGTGCAGC-TCATGTGAATTAGAGTGGGCGATG 951
consensus_9302#1 AGC-TGAGGGAGGCGGACAAGGAGTCGGACAAGCTGCGCCGCACGTTCGAGAAGATG-CG 898
consensus_9302#4 ------------------------------------------------------------
consensus_9302#0 TTGGGCGCAGTAGAACAAGTAAGCGGTTTGGTTCCTTTTTGCATTCAGTGTTAAAGACCG 948
consensus_9302#3 TTGTGCGCAGTAGAACGAGTAAGCGGTTTGGTTCCTTTTTGCATTCAGTGTTAAAGACCG 721
consensus_9302#2 TTGGG------------------------------------------------------- 956
consensus_9302#1 CAAGGACTACGAGCACGAGACGCTGGTGCGCGTGGACCTGGAGAACAACATACAGAGCCT 958
consensus_9302#4 ------------------------------------------------------------
consensus_9302#0 TAGTCAGTCGTTGTGTCATTTTGTACGTAAAAATGTAAACTCCAAACGACACGAGAAGTA 1008
consensus_9302#3 TAGTCAGTCGTTGTGTCATTTTGTACGTAAAAATGTAAACTCCAAACGACACGAGAAGTA 781
consensus_9302#2 ------------------------------------------------------------
consensus_9302#1 GCGGGAGGAGCTCACGTTCAAGGAGCAGGTGCACAGTCAGGAGCTGAGCGAGAGCAAGCT 1018
consensus_9302#4 ------------------------------------------------------------
consensus_9302#0 CACGAGGAGAAGAAGCTTTAGTTTCAACGTTATATAGTCAATTGTATCGATCAATAAATG 1068
consensus_9302#3 CACGAGGAGAAGAAGCTTTAGTTTCAACGTTATATAGTCAATTGTATCGATCAATAAATG 841
consensus_9302#2 ------------------------------------------------------------
consensus_9302#1 GCGCCGGCAGAGCGAGATCAGCGAGATCGACGGCTTCCTGATGGAGCAGTACGAGACGAA 1078
consensus_9302#4 ------------------------------------------------------------
consensus_9302#0 CATGCTAAAGATCAGTCTTGTTTGTCTTTTAGCCTAAAATGAAAAAA---- 1115
consensus_9302#3 CATGCTAAAGATCAAAAAAAAAAA------AAAAAAAAAAGGGCACATGTG 886
consensus_9302#2 ---------------------------------------------------
consensus_9302#1 GCTGCAGCAGACGCTGC---------------------------------- 1095
consensus_9302#4 ---------------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||