cluster # 9305

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Anopheles gambiae
cluster # 9305 cluster # 9305 Sequences # 15 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9305#0 length = 1238 sequences # 11

consensus_9305#1 length = 694 sequences # 2
consensus_9305#2 length = 497 sequences # 2

consensusID : consensus_9305#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1238
fasta sequence

                              [CCGCCCACGCGTCCGAGAACGGCTGCAATCGTCGTTTGCACAAAACGGGCCAATCGCTACCTTATCTCCCAAGGCTAGTGATTGCTGGTGGTATCGCATTTGTTTATTAGCATTTAGAACTTTCCTCTTCGAAAGAGTGAAGCGTTCTCTCTACCTCCGTTCAAGTGTAAACTACGCCACGGAAGTTAACGCACTTGCCTAGACGCACTGCCATTTGTCACTGCCATTTACGCAGTATTACGTAAAATGGGGCTGCTGGGAGGTATAAGGCCTCTGGCAGGACACCTACTCTTGCTCCTGCTCATCACCGCCTGCAATGGGCAAGTGTTTTACTACCAACCGGAGCAGGTGCACCTGTCCTTCGGCGAATCACCGCTCGAAATTGTCGTCACCTGGAGCACCATGACGGCGACGAACGAATCCATCGTCGAGTACGGCATCGGAGGGCTGATCCTGAGCGCTACCGGTACGGAAACGAAGTTCGTCGACGGTGGCCCTGCCAAGCGCACGCAATACATTCACCGGGTGGTGCTGCGTGACCTGCAGCCGTCCTCACGCTACGAGTACCACTGCGGCAGTCGGTGGGGCTGGTCGGCGGAGTTTTACTTCCATACCACCCCGGCCGGCACGGACTGGTCGCCGTCGTTGGCCATCTTCGGCGATATGGGCAACGAGAATGCACAGTCGATGGCACGGCTGCAGGAGGACACCCAGCGCCACATGTACGACGCGATTCTGCACGTGGGAGACTTCGCGTACGACATGAACACGGACGATGCGCTCGTGGGGGATCAGTTTATGAACCAGATCCAATCGATCGCCGCCTACACCCCGTACATGGTGTGTGCGGGCAATCACGAGGAGAAATACAATTTCTCCAACTATCGCGCACGGTTCAGCATGCCCGGTGGGACGGAAAACATCATGTACAGCTTCAACCTGGGCCCGGTGCATTTCATCGGCTTCTCCACCGAGGTGTACTACTTCATGAACTACGGGCTGAAGCCGCTGGTGAAGCAGTACGAGTGGTTGCGCCGCGACCTGGAGGAAGCGAACCGGCCGGAGAATCGCAAACTGCGCCCCTGGATCGTCACCTACGGTCACCGACCGATGTACTGCAGCAACGATAACGATAACGATTTCACCCACAGCGAAACGCTCGTGCGCGTGGGNCTCCCGTTCATGCACTGGTTCGGGCTGGAGGATCTGTTCTACGAGCACGGNGTCGATGTGGGAAA]

[+] EMBL BM636475             [CCGCCCACGCGTCCGAGAACGGCTGCAATCGTCGTTTGCACAAAACGGGCCAATCGCTACCTTATCTCCCAAGGCTAGTGATTGCTGGTGGTATCGCATTTGTTTATTAGCATTTAGAACTTTCCTCTTCGAAAGAGTGAAGCGTTCTCTCTACCTCCGTTCAAGTGTAAACTACGCCACTGAAGTTAACGCACTTGCCTAGACGCACTGCCATTTGTCACTGCCATTTACGCAGTATTACGTAAAATGGGGCTGCTGGGAGGTATAAGGCCTCTGGCAGGACACCTACTCTTGCTCCTGCTCATCACCGCCTGCAATGGGCAAGTGTTTTACTACCAACCGGAGCAGGTGCACCTGTCCTTCGGCGAATCACCGCTCGAAATTGTCGTCACCTGGAGCACCATGACGGCGACGAACGAATCCATCGTCGAGTACGGCATCGGAGGGCTGATCCTGAGCGCTACCGGTACGGAAACGAAGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM587742             [                                   ccGCACAAAACGGGCCAATCGCTACCTTATCTCCCAAGGCTAGTGATTGCTGGTGGTATCGCATTTGTTTATTAGCATTTAGAACTTTCCTCTTCGAAAGAGTGAAGCGTTCTCTCTACCTCCGTTCAAGTGTAAACTACGCCACGGAAGTTAACGCACTTGCCTAGACGCACTGCCATTTGTCACTGCCATTTACGCAGTATTACGTAAAATGGGGCTGCTGGGAGGTATAAGGCCTCTGGCAGGACACCTACTCTTGCTCCTGCTCATCACCGCCTGCAATGGGCAAGTGTTTTACTACCAACCGGAGCAGGTGCACCTGTCCTTCGGCGAATCACCGCTCGAAATTGTCGTCACCTGGAGCACCATGACGGCGACGAACGAATCCATCGTCGAGTACGGCATCGGAGGGCTGATCCTGAGCGCTACCGGTACGGAAACGAAGTTCGTCGACGGTGGCCCTGCCAAGCGCACGCAATACATTCACCGGGTGGTGCTGCGTGACCTGCAGCCGTCCTCACGCTACGAGTACCACTGCGGCAGTCGGTGGGGCTGGTCGGCGGAGTTTTACTTCCATACCACCCCGGCCGGCACGGACTGGTCGCCGTCGTTGGCCATCTTCGGCGATATGGGCAACGAGAATGCACAGTCGATGGCACGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AGA284742            [                                                                                               GCATTTGTTTATTAGCATTTAGAACTTTCCTCTTCGAAAGAGTGAAGCGTTCTCTCTACCTCCGTTCAAGTGTAAACTACGCCACGGAAGTTAACGCACTTGCCTAGACGCACTGCCATTTGTCACTGCCATTTACGCAGTATTACGTAAAATGGGGCTGCTGGGAGGTATAAGGCCTCTGGCAGGACACCTACTCTTGCTCCTGCTCATCACCGCCTGCAATGGGCAAGTGTTTTACTACCAACCGGAGCAGGTGCACCTGTCCTTCGGCGAATCACCGCTCGAAATTGTCGTCACCTGGAGCACCATGACGGCGACGAACGAATCCATCGTCGAGTACGGCATCGGAGGGCTGATCCTGAGCGCTACCGGTACGGGAACGAAGTTCGTCGACGGTTGGCCTGCCAAGCGCACGCAATACATTCACCGGGTGGTGCTGCGTGACCTGCAGCCGTCCTCACGCTACGAGTACCACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX619268             [                                                                                                               ATTTAGAACTTTCCTCTTCGAAAGAGTGAAGCGTTCTCTCTACCTCCGTTCAAGTGTAAACTACGCCACGGAAGTTAACGCACTTGCCTAGACGCACTGCCATTTGTCACTGCCATTTACGCAGTATTACGTAAAATGGGGCTGCTGGGAGGTATAAGGCCTCTGGCAGGACACCTACTCTTGCTCCTGCTCATCACCGCCTGCAATGGGCAAGTGTTTTACTACCAACCGGAGCAGGTGCACCTGTCCTTCGGCGAATCACCGCTCGAAATTGTCGTCACCTGGAGCACCATGACGGCGACGAACGAATCCATCGTCGAGTACGGCATCGGAGGGCTGATCCTGAGCGCTACCGGTACGGAAACGANGTTCGTCGACGGTGGCCCTGCCAAGCGCACGCAATACATTCACCGGGTGGTGCTGCGTGACCTGCAGCCGTCCTCACGCTACGAGTACCACTGCGGCAGTCGGTGGGGCTGGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX624745             [                                                                                                                                     AGAGTGAAGCGTTCTCTCTACCTCCGTTCAAGTGTAAACTACGCCACGGAAGTTAACGCACTTGCCTAGACGCACTGCCATTTGTCACTGCCATTTACGCAGTATTACGTAAAATGGGGCTGCTGGGAGGTATAAGGCCTCTGGCAGGACACCTACTCTTGCTCCTGCTCATCACCGCCTGCAATGGGCAAGTGTTTTACTACCAACCGGAGCAGGTGCACCTGTCCTTCGGCGAATCACCGCTCGAAATTGTCGTCACCTGGAGCACCATGACGGCGACGAACGAATCCATCGTCGAGTACGGCATCGGAGGGCTGATCCTGAGCGCTACCGGTACGGAAACGAAGTTCGTCGACGGTGGCCCTGCCAAGCGCACGCAATACATTCACCGGGTGGTGCTGCGTGACCTGCAGCCGTCCTCACGCTACGAGTACCACTGCGGCAGTCGGTGGGGCTGGTCGGCGGAGTTTTACTTCCATACCACCCCGGCCGGCACGGACTGGTCGCCGTCGTTGGCCATCTTCGGCGATATGGGCAACGAGAATGCACAGTCGATGGCACGGCTGCAGGAGGACACCCAGCGCCACATGTACGACGCGATTCTGCACGTGGGAGACTTCGCGTACGACATGAACACGGACGATGCGCTCGTGGGGGATCAGTTTATGAACCAGATCCAATCGATCGCCGCCTACACCCCGTACATGGTGTGTGCGGGCAATCACGAGGAGAAATACAATTTCTCCAACTA                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM632802             [                                                                                                                                                                                 ccgGGAAGTTAACGCACTTGCCTAGACGCACTGCCATTTGTCACTGCCATTTACGCAGTATTACGTAAAATGGGGCTGCTGGGAGGTATAAGGCCTCTGGCAGGACACCTACTCTTGCTCCTGCTCATCACCGCCTGCAATGGGCAAGTGTTTTACTACCAACCGGAGCAGGTGCACCTGTCCTTCGGCGAATCACCGCTCGAAATTGTCGTCACCTGGAGCACCATGACGGCGACGAACGAATCCATCGTCGAGTACGGCATCGGAGGGCTGATCCTGAGCGCTACCGGTACGGAAACGAAGTTCGTCGACGGTGGCCCTGCCAAGCGCACGCAATACATTCACCGGGTGGTGCTGCGTGACCTGCAGCCGTCCTCACGCTACGAGTACCACTGCGGCAGTCGGTGGGGCTGGTCGGCGGAGTTTTACTTCCATACCACCCCGGCCGGCACGGACTGGTCGCCGTCGTTGGCCATCTTCGGCGATATGGGCAACGAGAATGCACAGTCGATGGCACGGCTGCAGGAGGACACCCAGCGCCACATGTACGACGCGATTCTGCACGTGGGAGACTTCGCGTACGACATGAACACGGACGATGCGCTCGTGGGGGATCAGTTTATGAACCAGATCCAATCGATCGCCGCCTACACCCCGTACATGGTGTGTGCGGGCAATCAC                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM635045             [                                                                                                                                                                                                                                                                                                                                                                                             ccgGTCGTCACCTGGAGCACCATGTCGGCGACGAACGAATCCATCGTCGAGTACGGCATCGGAGGGCTGATCCTGAGCGCTACCGGTACGGAAACGAAGTTCGTCGACGGTGGTCCTGCCAAGCGCACGCAATACATTCACCGGGTGGTGCTGCGTGACCTGCAGCCGTCCTCACGCTACGAGTACCACTGCGGCAGTCGGTGGGGCTGGTCGGCAGAGTTTTACTTCCACACCACCCCGGCCGGCACGGACTGGTCGCCGTCGTTGGCCATCTTCGGCGATATGGGCAACGAGAATGCACAGTCGATGGCACGGCTGCAGGAGGACACCCAGCGCCACATGTACGATGCGATTCTGCACGTGGGAGACTTCGCGTACGACATGAACACGGACGATGCGCTCGTGGGGGATCAGTTTATGAACCAGATCCAATCGATCGCCGCCTACACCCCGTACATGGTGTGTGCGGGCAATCACGAGGAGAAATACAATTTCTCCAACTATCGCGCACGGTTCAGCATGCCCGGTGGGACGGAAAACATCATGTACAGCTTCAACCTGGGCCCGGTGCATTTCATCGGCTTCTCCACCGAGGTGTACTACTTCATGAACTACGGGCTGAAGCCGCTGGTGAAGCAGTACGAGTGGTTGCGCCGCGACCTGGAGGAAGCGAACCGGCCGGAGAATCGC                                                                                                                                                                       ]
[+] EMBL BX621664             [                                                                                                                                                                                                                                                                                                                                                                                                                   TGACGGCGACGAACGAATCCATCGTCGAGTACGGCATCGGAGGGCTGATCCTGAGCGCTACCGGTACGGAAACGAAGTTCGTCGACGGTGGCCCTGCCAAGCGCACGCAATACATTCACCGGGTGGTGCTGCGTGACCTGCAGCCGTCCTCACGCTACGAGTACCACTGCGGCAGTCGGTGGGGCTGGTCGGCGGAGTTTTACTTCCATACCACCCCGGCCGGCACGGACTGGTCGCCGTCGTTGGCCATCTTCGGCGATATGGGCAACGAGAATGCACAGTCGATGGCACGGCTGCAGGAGGACACCCAGCGCCACATGTACGACGCGATTCTGCACGTGGGAGACTTCGCGTACGACATGAACACGGACGATGCGCTCGTGGGGGATCAGTTTATGAACCAGATCCAATCGATCGCCGCCTACACCCCGTACATGGTGTGTGCGGGCAATCACGAGGAGAAATACAATTTCTCCAACTATCGCGCACGGTTCAGCATGCCCGGTGGGACGGAAAACATCATGTACAGCTTCAACCTGGGCCCGGTGCATTTCATCGGCTTCTCCACCGAGGTGTACTACTTCATGAACTACGGGCTGAAGCCGCTGGTGAAGCAGTACGAGTGGTTGCGCCGCGACCTGGANGAAGCGAACCGGCCGGAGAATCGCAAACTGCGCCCCTGGATCGTCACCTACGGTCACCGACCGATGTACTGCAGCAACGATAACGATAACGATTTCACCCACAGCGAAACGCTCGTGCGCGTGGGNCTCCCGTTCATGCACTGGTTCGGGCTGGAGGATCTGTTCTACGAGCACGGNGTCGATGTGGGAAA]
[+] EMBL BX617945             [                                                                                                                                                                                                                                                                                                                                                                                                                        GCGACGAACGAATCCATCGTCGAGTACGGCATCGGAGGGCTGATCCTGAGCGCTACCGGTA  AAAACGAAGTTCGTCGACGGTGGCCCTGCCAAGCGCACGCAATACATTCACCGGGTGGTGCTGCGTGACCTGCAGCCGTCCTCACGCTACGAGTACCACTGCGGCAGTCGGTGGGGCTGGTCGGCGGAGTTTTACTTCCATACCACCCCGGCCGGCACGGACTGGTCGCCGTCGTTGGCCATCTTCGGCGATATGGGCAACGAGAATGCACAGTCGATGGCACGGCTGCAGGAGGACACCCAGCGCCACATGTACGACGCGATTCTGCACGTGGGAGACTTCGCGTACGACATGAACACGGACGATGCGCTCGTGGGGGATCAGTTTATGAACCAGATCCAATCGATCGCCGCCTACACCCCGTACATGGTGTGTGCGGGCAATCACGAGGAGAAATACAATTTCTCCAACTATCGCGCACGGTTCAGCATGCCCGGTGGGA                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX614222             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ACCGGGTGGTGCTGCGTGACCTGCAGCCGTCCTCACGCTACGAGTACCACTGCGGCAGTCGGTGGGGCTGGTCGGCGGAGTTTTACTTCCATACCACCCCGGCCGGCACGGACTGGTCGCCGTCGTTGGCCATCTTCGGCGATATGGGCAACGAGAATGCACAGTCGATGGCACGGCTGCAGGAGGACACCCAGCGCCACATGTACGACGCGATTCTGCACGTGGGAGACTTCGCGTACGACATGAACACGGACGATGCGCTCGTGGGGGATCAGTTTATGAACCAGATCCAATCGATCGCCGCCTACACCCCGTACATGGTGTGTGCGGGCAATCACGAGGAGAAATACAATTTCTCCAACTATCGCGCACGGTTCAGCATGCCCGGTGGGACGGAAAACATCATGTACAGCTTCAACCTGGGCCCGGTGCATTTCATCGGCTTCTCCACCGAGGTGTACTACTTCATGAACTACGGGCTGAAGCCGCTGGTGAAGCAGTACGAGTGGTTGCGCCGCGACCTGGAGGAA                                                                                                                                                                                            ]
[+] EMBL BX605498             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATATGGGCAACGAGAATGCACAGTCGATGGCACGGCTGCAGGAGGACACTCAGCGCCACATGTACGACGCGATTCTGCACGTGGGAGACTTCGCGTACGACATGAACACGGACGATGCGCTCGTGGGGGATCAGTTTATGAACCAGATCCAATCGATCGCCGCCTACACCCCGTACATGGTGTGTGCGGGCAATCACGAGGAGAAATACAATTTCTCCAACTATCGCGCACGGTTCAGCATGCCCGGTGGGACGGAAAACATCATGTACAGCTTCAACCTGGGACCGGTGCATTTCATCGGCTTCTCCACCGAGGTGTACTACTTCATGAACTACGGGCTGAAGCCGCTGGTGAAGCAGTACGAGTGGTTGCGCCGCGACCTGGAGGAAGCGAACCGGCCGGAGAATCGCAAACTGCGCCCCTGGATCGTCACCTACGGTCACCGACCGATGTACTGCAGCAACGATAACGATAACGATTGCACCCACAGCGAAACGATCGTGCGCGTGGGCCTCCCGTTCATGCACTGGTTCGGGCTGGAGGATCTGTTCTACGAGCACGGTGTCGATGTG     ]




>consensus_9305#0
CCGCCCACGCGTCCGAGAACGGCTGCAATCGTCGTTTGCACAAAACGGGCCAATCGCTAC
CTTATCTCCCAAGGCTAGTGATTGCTGGTGGTATCGCATTTGTTTATTAGCATTTAGAAC
TTTCCTCTTCGAAAGAGTGAAGCGTTCTCTCTACCTCCGTTCAAGTGTAAACTACGCCAC
GGAAGTTAACGCACTTGCCTAGACGCACTGCCATTTGTCACTGCCATTTACGCAGTATTA
CGTAAAATGGGGCTGCTGGGAGGTATAAGGCCTCTGGCAGGACACCTACTCTTGCTCCTG
CTCATCACCGCCTGCAATGGGCAAGTGTTTTACTACCAACCGGAGCAGGTGCACCTGTCC
TTCGGCGAATCACCGCTCGAAATTGTCGTCACCTGGAGCACCATGACGGCGACGAACGAA
TCCATCGTCGAGTACGGCATCGGAGGGCTGATCCTGAGCGCTACCGGTACGGAAACGAAG
TTCGTCGACGGTGGCCCTGCCAAGCGCACGCAATACATTCACCGGGTGGTGCTGCGTGAC
CTGCAGCCGTCCTCACGCTACGAGTACCACTGCGGCAGTCGGTGGGGCTGGTCGGCGGAG
TTTTACTTCCATACCACCCCGGCCGGCACGGACTGGTCGCCGTCGTTGGCCATCTTCGGC
GATATGGGCAACGAGAATGCACAGTCGATGGCACGGCTGCAGGAGGACACCCAGCGCCAC
ATGTACGACGCGATTCTGCACGTGGGAGACTTCGCGTACGACATGAACACGGACGATGCG
CTCGTGGGGGATCAGTTTATGAACCAGATCCAATCGATCGCCGCCTACACCCCGTACATG
GTGTGTGCGGGCAATCACGAGGAGAAATACAATTTCTCCAACTATCGCGCACGGTTCAGC
ATGCCCGGTGGGACGGAAAACATCATGTACAGCTTCAACCTGGGCCCGGTGCATTTCATC
GGCTTCTCCACCGAGGTGTACTACTTCATGAACTACGGGCTGAAGCCGCTGGTGAAGCAG
TACGAGTGGTTGCGCCGCGACCTGGAGGAAGCGAACCGGCCGGAGAATCGCAAACTGCGC
CCCTGGATCGTCACCTACGGTCACCGACCGATGTACTGCAGCAACGATAACGATAACGAT
TTCACCCACAGCGAAACGCTCGTGCGCGTGGGNCTCCCGTTCATGCACTGGTTCGGGCTG
GAGGATCTGTTCTACGAGCACGGNGTCGATGTGGGAAA

consensusID : consensus_9305#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 694
fasta sequence

                              [CCGAAACAACGCAAAACAAAGAACGGCTGCAATCGTCGTTTGCACAAAACGGGCCAATCGCTACCTTATCTCCCAAGGCTAGTGATTGCTGGTGGTATCGCATTTGTTTATTAGCATTTAGAACTTTCCTCTTCGAAAGAGTGAAGCGTTCTCTCTACCTCCGTTCAAGTGTAAACTACGCCACGGAAGTTAACGCACTTGCCTAGACGCACTGCCATTTACGCAGTATTACGTAAAATGGGGCTGCTGGGAGGTATAAGGCCTCTGGCAGGACACCTACTCTTGCTCCTGCTCATCACCGCCTGCAATGGGCAAGTGTTTTACTACCAACCGGAGCAGGTGCACCTGTCCTTCGGCGAATCACCGCTCGAAATTGTCGTCACCTGGAGCACCATGACGGCGACGAACGAATCCATCGTCGAGTACGGCATCGGAGGGCTGATCCTGAGCGCTACCGGTACGGAAACGAAGTTCGTCGACGGTGGTCCTGCCAAGCGCACGCAATACATTCACCGGGTGGTGCTGCGTGACCTGCAGCCGTCCTCACGCTACGAGTACCACTGCGGCAGTCGGGGGGGCTGGTCGGCAGAGTTTTACTTCCACACCACCCCGGCCGGCACGGACTGGTCGCCGTCGTTGGCCATCTTCGGCGATATGGGCAACGAGAATGCACAGTCGATGGCACGGCTGCAGG]

[+] EMBL BM645414             [CCGAAACAACGCAAAACAAAGAACGGCTGCAATCGTCGTTTGCACAAAACGGGCCAATCGCTACCTTATCTCCCAAGGCTAGTGATTGCTGGTGGTATCGCATTTGTTTATTAGCATTTAGAACTTTCCTCTTCGAAAGAGTGAAGCGTTCTCTCTACCTCCGTTCAAGTGTAAACTACGCCACGGAAGTTAACGCACTTGCCTAGACGCACTGCCATTTACGCAGTATTACGTAAAATGGGGCTGCTGGGAGGTATAAGGCCTCTGGCAGGACACCTACTCTTGCTCCTGCTCATCACCGCCTGCAATGGGCAAGTGTTTTACTACCAACCGGAGCAGGTGCACCTGTCCTTCGGCGAATCACCGCTCGAAATTGTCGTCACCTGGAGCACCATGACGGCGACGAACGAATCCATCGTCGAGTACGGCATCGGAGGGCTGATCCTGAGCGCTACCGGTACGGAAACGAAGTTCGTCGACGGTGGTCCTGCCAAGCGCACGCAATACATTCACCGGGTGGTGCTGCGTGACCTGCAGCCGTCCTCACGCTACGAGTACCACTGCGGCAGTCGGGGGGGCTGG                                                                                                                ]
[+] EMBL BM625081             [                                                                              ccgGTGATTGCTGGTGGTATCGCATTTGTTTATTAGCATTTAGAACTTTCCTCTTCGAAAGAGTGAAGCGTTCTCTCTACCTCCGTTCAAGTGTAAACTACGCCACGGAAGTTAACGCACTTGCCTAGACGCACTGCCATTTACGCAGTATTACGTAAAATGGGGCTGCTGGGAGGTATAAGGCCTCTGGCAGGACACCTACTCTTGCTCCTGCTCATCACCGCCTGCAATGGGCAAGTGTTTTACTACCAACCGGAGCAGGTGCACCTGTCCTTCGGCGAATCACCGCTCGAAATTGTCGTCACCTGGAGCACCATGACGGCGACGAACGAATCCATCGTCGAGTACGGCATCGGAGGGCTGATCCTGAGCGCTACCGGTACGGAAACGAAGTTCGTCGACGGTGGTCCTGCCAAGCGCACGCAATACATTCACCGGGTGGTGCTGCGTGACCTGCAGCCGTCCTCACGCTACGAGTACCACTGCGGCAGTCGGTGGGGCTGGTCGGCAGAGTTTTACTTCCACACCACCCCGGCCGGCACGGACTGGTCGCCGTCGTTGGCCATCTTCGGCGATATGGGCAACGAGAATGCACAGTCGATGGCACGGCTGCAGG]




>consensus_9305#1
CCGAAACAACGCAAAACAAAGAACGGCTGCAATCGTCGTTTGCACAAAACGGGCCAATCG
CTACCTTATCTCCCAAGGCTAGTGATTGCTGGTGGTATCGCATTTGTTTATTAGCATTTA
GAACTTTCCTCTTCGAAAGAGTGAAGCGTTCTCTCTACCTCCGTTCAAGTGTAAACTACG
CCACGGAAGTTAACGCACTTGCCTAGACGCACTGCCATTTACGCAGTATTACGTAAAATG
GGGCTGCTGGGAGGTATAAGGCCTCTGGCAGGACACCTACTCTTGCTCCTGCTCATCACC
GCCTGCAATGGGCAAGTGTTTTACTACCAACCGGAGCAGGTGCACCTGTCCTTCGGCGAA
TCACCGCTCGAAATTGTCGTCACCTGGAGCACCATGACGGCGACGAACGAATCCATCGTC
GAGTACGGCATCGGAGGGCTGATCCTGAGCGCTACCGGTACGGAAACGAAGTTCGTCGAC
GGTGGTCCTGCCAAGCGCACGCAATACATTCACCGGGTGGTGCTGCGTGACCTGCAGCCG
TCCTCACGCTACGAGTACCACTGCGGCAGTCGGGGGGGCTGGTCGGCAGAGTTTTACTTC
CACACCACCCCGGCCGGCACGGACTGGTCGCCGTCGTTGGCCATCTTCGGCGATATGGGC
AACGAGAATGCACAGTCGATGGCACGGCTGCAGG

consensusID : consensus_9305#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 497
fasta sequence

                              [CCGCCCACGCGTCCGGCTGCTGGGAGGTATAAGGCCTCTGGCAGGACACCTACTCTTGCTCCTGCTCATCACCGCCTGCAATGGGCAAGTGTTTTACTACCAACCGGAGCAGGTGCACCTGTCCTTCGGCGAATCACCGCTCGAAATTGTCGTCACCTGGAGCACCATGACGGCGACGAACGAATCCATCGTCGAGTACGGCATCGGAGGGCTGATCCTGAGCGCTACCGGTACGGAAACGAAGTTCGTCGACGGTGGCCCTGCCAAGCGCACGCAATACATTCACCGGGTGGTGCTGCGTGACCTGCAGCCGTCCTCACGCTACGAGTACCACTGCGGCAGTCGGTGGGGCTGGTCGGCGGAGTTTTACTTCCATACCACCCCGGCCGGCACGGACTGGTCGCCGTCGTTGGCCATCTTCGGCGATATGGGCAACGAGAATGCACAGTCGATGGCACGGCTGCAGGAGGACACCCAGCGCCACATGTACGACGCGA]

[+] EMBL BM628603             [CCGCCCACGCGTCCGGCTGCTGGGAGGTATAAGGCCTCTGGCAGGACACCTACTCTTGCTCCTGCTCATCACCGCCTGCAATGGGCAAGTGTTTTACTACCAACCGGAGCAGGTGCACCTGTCCTTCGGCGAATCACCGCTCGAAATTGTCGTCACCTGGAGCACCATGACGGCGACGAACGAATCCATCGTCGAGTACGGCATCGGAGGGCTGATCCTGAGCGCTACCGGTACGGAAACGAAGTTCGTCGACGGTGGCCCTGCCAAGCGCACGCAATACATTCACCGGGTGGTGCTGCGTGACCTGCAGCCGTCCTCACGCTACGAGTACCACTGCGGCAGTCGGTGGGGCTGGTCGGCGGAGTTTTACTTCCATACCACCCCGGCCGGCACGGACTGGTCGCCGTCGTTGGCCATCTTCGGCGATATGGGCAACGAGAATGCACAGTCGATGGCACGGCTGCAGGAGGACACCCAGCGCCACATGTACGACGCGA]
[+] EMBL BX602893             [                           TATAAGGCCTCTGGCAGGACACCTACTCTTGCTCCTGCTCATCACCGCCTGCAATGGGCAAGTGTTTTACTACCAACCGGAGCAGGTGCACCTGTCCTTCGGCGAATCACCGCTCGAAATTGTCGTCACCTGGAGCACCATGACGGCGACGAACGAATCCATCGTCGAGTACGGCATCGGAGGGCTGATCCTGAGCGCTACCGGTACGGAAACGAAGTTCGTCGACGGTGGCCCTGCCAAGCGCACGCAATACATTCACCGGGTGGTGCTGCGTGACCTGCAGCCGTCCTCACGCTACGAGTACCACTGCGGCAGTCGGTGGGGCTGGTCGGCGGAGTTTTACT                                                                                                                              ]




>consensus_9305#2
CCGCCCACGCGTCCGGCTGCTGGGAGGTATAAGGCCTCTGGCAGGACACCTACTCTTGCT
CCTGCTCATCACCGCCTGCAATGGGCAAGTGTTTTACTACCAACCGGAGCAGGTGCACCT
GTCCTTCGGCGAATCACCGCTCGAAATTGTCGTCACCTGGAGCACCATGACGGCGACGAA
CGAATCCATCGTCGAGTACGGCATCGGAGGGCTGATCCTGAGCGCTACCGGTACGGAAAC
GAAGTTCGTCGACGGTGGCCCTGCCAAGCGCACGCAATACATTCACCGGGTGGTGCTGCG
TGACCTGCAGCCGTCCTCACGCTACGAGTACCACTGCGGCAGTCGGTGGGGCTGGTCGGC
GGAGTTTTACTTCCATACCACCCCGGCCGGCACGGACTGGTCGCCGTCGTTGGCCATCTT
CGGCGATATGGGCAACGAGAATGCACAGTCGATGGCACGGCTGCAGGAGGACACCCAGCG
CCACATGTACGACGCGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9305#0      CCGCCCACGCGTCCGAGAACGGCTGCAATCGTCGTTTGCACAAAACGGGCCAATCGCTAC 60
consensus_9305#2      ------------------------------------------------------------
consensus_9305#1      ---------CCGAAACAACGCAAAACAAAGAACGGCTGCAATCGTCGTTTGCACAAAACG 51
                                                                                  

consensus_9305#0      CTTATCTCCCAAGGCTAGTGATTGCTGGTGGTATCGCATTTGTTTATTAGCATTTAGAAC 120
consensus_9305#2      ------------------------------------------------------------
consensus_9305#1      GGCCAATCGCTACCTTATCTCCCAAGGCTAGTGATTGCTGGTGGTATCGCATTTGTTTAT 111
                                                                                  

consensus_9305#0      TTTCCTCTTCGAAAGAGTGAAGCGTTCTCTCTACCTCCGTTCAAGTGTAAACTACGCCAC 180
consensus_9305#2      ------------------------------------------------------------
consensus_9305#1      TAGCATTTAGAACTTTCCTCTTCGAAAGAGTGAAGCGTTCTCTCTACCTCCGTTCAAGTG 171
                                                                                  

consensus_9305#0      GGAAGTTAACGCACTTGCCTAGACGCACTGCCATTTGTCACTGCCATTTACGCAGTATTA 240
consensus_9305#2      ---------------------------------------------------------CCG 3
consensus_9305#1      TAAACTACGCCACGGAAGTTAACGCACTTGCCTAGACGCACTGCCATTTACGCAGTATTA 231
                                                                                  

consensus_9305#0      CGTAAA-ATGGGGCTGCTGGGAGGTATAAGGCCTCTGGCAGGACACCTACTCTTGCTCCT 299
consensus_9305#2      CCCACGCGTCCGGCTGCTGGGAGGTATAAGGCCTCTGGCAGGACACCTACTCTTGCTCCT 63
consensus_9305#1      CGTAAA-ATGGGGCTGCTGGGAGGTATAAGGCCTCTGGCAGGACACCTACTCTTGCTCCT 290
                      *  *    *  *************************************************

consensus_9305#0      GCTCATCACCGCCTGCAATGGGCAAGTGTTTTACTACCAACCGGAGCAGGTGCACCTGTC 359
consensus_9305#2      GCTCATCACCGCCTGCAATGGGCAAGTGTTTTACTACCAACCGGAGCAGGTGCACCTGTC 123
consensus_9305#1      GCTCATCACCGCCTGCAATGGGCAAGTGTTTTACTACCAACCGGAGCAGGTGCACCTGTC 350
                      ************************************************************

consensus_9305#0      CTTCGGCGAATCACCGCTCGAAATTGTCGTCACCTGGAGCACCATGACGGCGACGAACGA 419
consensus_9305#2      CTTCGGCGAATCACCGCTCGAAATTGTCGTCACCTGGAGCACCATGACGGCGACGAACGA 183
consensus_9305#1      CTTCGGCGAATCACCGCTCGAAATTGTCGTCACCTGGAGCACCATGACGGCGACGAACGA 410
                      ************************************************************

consensus_9305#0      ATCCATCGTCGAGTACGGCATCGGAGGGCTGATCCTGAGCGCTACCGGTACGGAAACGAA 479
consensus_9305#2      ATCCATCGTCGAGTACGGCATCGGAGGGCTGATCCTGAGCGCTACCGGTACGGAAACGAA 243
consensus_9305#1      ATCCATCGTCGAGTACGGCATCGGAGGGCTGATCCTGAGCGCTACCGGTACGGAAACGAA 470
                      ************************************************************

consensus_9305#0      GTTCGTCGACGGTGGCCCTGCCAAGCGCACGCAATACATTCACCGGGTGGTGCTGCGTGA 539
consensus_9305#2      GTTCGTCGACGGTGGCCCTGCCAAGCGCACGCAATACATTCACCGGGTGGTGCTGCGTGA 303
consensus_9305#1      GTTCGTCGACGGTGGTCCTGCCAAGCGCACGCAATACATTCACCGGGTGGTGCTGCGTGA 530
                      *************** ********************************************

consensus_9305#0      CCTGCAGCCGTCCTCACGCTACGAGTACCACTGCGGCAGTCGGTGGGGCTGGTCGGCGGA 599
consensus_9305#2      CCTGCAGCCGTCCTCACGCTACGAGTACCACTGCGGCAGTCGGTGGGGCTGGTCGGCGGA 363
consensus_9305#1      CCTGCAGCCGTCCTCACGCTACGAGTACCACTGCGGCAGTCGGGGGGGCTGGTCGGCAGA 590
                      ******************************************* ************* **

consensus_9305#0      GTTTTACTTCCATACCACCCCGGCCGGCACGGACTGGTCGCCGTCGTTGGCCATCTTCGG 659
consensus_9305#2      GTTTTACTTCCATACCACCCCGGCCGGCACGGACTGGTCGCCGTCGTTGGCCATCTTCGG 423
consensus_9305#1      GTTTTACTTCCACACCACCCCGGCCGGCACGGACTGGTCGCCGTCGTTGGCCATCTTCGG 650
                      ************ ***********************************************

consensus_9305#0      CGATATGGGCAACGAGAATGCACAGTCGATGGCACGGCTGCAGGAGGACACCCAGCGCCA 719
consensus_9305#2      CGATATGGGCAACGAGAATGCACAGTCGATGGCACGGCTGCAGGAGGACACCCAGCGCCA 483
consensus_9305#1      CGATATGGGCAACGAGAATGCACAGTCGATGGCACGGCTGCAGG---------------- 694
                      ********************************************                

consensus_9305#0      CATGTACGACGCGATTCTGCACGTGGGAGACTTCGCGTACGACATGAACACGGACGATGC 779
consensus_9305#2      CATGTACGACGCGA---------------------------------------------- 497
consensus_9305#1      ------------------------------------------------------------
                                                                                  

consensus_9305#0      GCTCGTGGGGGATCAGTTTATGAACCAGATCCAATCGATCGCCGCCTACACCCCGTACAT 839
consensus_9305#2      ------------------------------------------------------------
consensus_9305#1      ------------------------------------------------------------
                                                                                  

consensus_9305#0      GGTGTGTGCGGGCAATCACGAGGAGAAATACAATTTCTCCAACTATCGCGCACGGTTCAG 899
consensus_9305#2      ------------------------------------------------------------
consensus_9305#1      ------------------------------------------------------------
                                                                                  

consensus_9305#0      CATGCCCGGTGGGACGGAAAACATCATGTACAGCTTCAACCTGGGCCCGGTGCATTTCAT 959
consensus_9305#2      ------------------------------------------------------------
consensus_9305#1      ------------------------------------------------------------
                                                                                  

consensus_9305#0      CGGCTTCTCCACCGAGGTGTACTACTTCATGAACTACGGGCTGAAGCCGCTGGTGAAGCA 1019
consensus_9305#2      ------------------------------------------------------------
consensus_9305#1      ------------------------------------------------------------
                                                                                  

consensus_9305#0      GTACGAGTGGTTGCGCCGCGACCTGGAGGAAGCGAACCGGCCGGAGAATCGCAAACTGCG 1079
consensus_9305#2      ------------------------------------------------------------
consensus_9305#1      ------------------------------------------------------------
                                                                                  

consensus_9305#0      CCCCTGGATCGTCACCTACGGTCACCGACCGATGTACTGCAGCAACGATAACGATAACGA 1139
consensus_9305#2      ------------------------------------------------------------
consensus_9305#1      ------------------------------------------------------------
                                                                                  

consensus_9305#0      TTTCACCCACAGCGAAACGCTCGTGCGCGTGGGNCTCCCGTTCATGCACTGGTTCGGGCT 1199
consensus_9305#2      ------------------------------------------------------------
consensus_9305#1      ------------------------------------------------------------
                                                                                  

consensus_9305#0      GGAGGATCTGTTCTACGAGCACGGNGTCGATGTGGGAAA 1238
consensus_9305#2      ---------------------------------------
consensus_9305#1      ---------------------------------------