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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9307#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1911 fasta sequence
[ACTACGTGAAAAAACCAAAACATTCGGCGGCTCTGGGTGTTATTGCAATAGTTAACTAAATTATCGGAAAAATAATATTCTCCACCTCATGCAACATGATTGCCAATG-ATCTGTTTCGTAAGCTTTCGTGTGGTGCCAAATTTTCCAACAAAAACAGGCTGCCAGTCAAAAGAAAGCTTGAAAATGGCAGTACAACGAGCCTCCCAAAATTGAAGGTATGCATTAAGGAGGAAACG-GACACCGGCCGCAAAGTGAAGGCTTCCAAAGTGACGAAATCACTGGTAGCAACACCGGTAGAGGATACGCGAATAAAAAGCGAAGATTCTTCGAGTGACGATTCGGGAAGCGAACAGGAGAACCGGGAGCAGGAAAAATCAGTGCAACAAAAAAAGATTGTACCTCCGGAGAAGGTCGAGCTGATCAATCAGCTTCGCTTGAATCGGCTGCGAAACCAGCTCAAAATCCATGTGAAGAAAAGTCGACACAGTCCCGAAGTGCCCAACATCATCGAATCGTTCGATCAGCTCAGCACTGACTATGGTGTGTCGAACCGGTTGGTGGCGAACATTCAGAGCTGCTACAGCACACCGACACC-GGTGCAAATGCAAGCCATACCGATACTGCTGAAAACGCACTCGCTGCATGCCTGCGCTCCGACCGGGTCGGGTAAAACGGCCGCCTTTCTGATTCCTATTCTACACCATCTGAAGAAACCAATGAAGTGCGGGTTCAGGGCGCTTATCATTTGTCCAACGCGCGAACTGGCGAACAG-ACGCAGCGGGAGGCACTGCGGCTCGGCGATGAAATGAACCTTCGTACGCACGTCATACACATGGTGGACGACCCGAAGAAGTGTGATTACAGTTTCGCTAGCGGCCGCAGCTACGATATACTGGTGACGACCCCCAATCGAATCTGCTATCTGCTGTCGCAGAATCCTCCGAAAATCGATCTTAGCAACATTCAATGGGTTGTGATAGATGAGGCGGATAAATTGTTTGAAGATTCCAAAAACTCGTTCCGCGACCAGCTCGACACGGTGCTGACGGCATGCAACAATCCGAGCAAAACGATAGCCCTTTTCAGTGCGACGCAAACGCGAGACGTCAATCTGTGGGTAGCAAAAAACGTTCCCAACCGCATCCGGTTCTCCATCGGCCTCATCAACGGTGCGGTCG-AGCTGGTGGATCAAAAGCTGCTCTTCACCGGCAGCGAATCAGGCAAACTGCTTGCCTTCCGCGAGATGGTAGCGCAAGGGCTGCACCCACCGGTGCTCGTGTTTGTGCAGAGCAAGGATCGAGCACAGCAGCTGTTCACCGAGCTGATCTACGATGGGCTCAACGTGGACGTCATACACTCCGATCGTACGCAGCGCGAACGAGACAACGTGGTGCGCGCCTTCCGTGAGGGTAAAATTTGGATCCTCATCTGTACCGAGCTGATGAGCCGCGGTATCGACTTTAAGGG-TGTTAATTTGGTTGTCAATTACGACTTTCCGCCGTCCACCATATCGTATGTCCATCGTATCGGACGGACGGGTCGCGCCGGTCGACCCGGGAAAGCTGTCACCTTTTTCACCAAAGACGATACGGTTAATCTGAAAAGCATTGCACAGCTGATAAAATCTGCAGGTGGGGAGGTGCCGGACTACATGCTGCAAATGCATGGTAGCTCGAAGAAGGCACGAGACACTCTAGCTCAAAAAGCACCGAAACGGGCCATGATTCGAACGATTCCTACGTTCGAGCTTCAACAGCTCCAGCGCAAGAAGCGGTTCGTCAGCAAAAGCAAAGGTAAAAATAAACCTCTCGTGGTTAGTAGTAACAGTAGAAACAAAAGTGCAAACGCTGGTAAATCAAAGCGTTCAAAGCCGTCAGCGAGCAAAAAATAAAAAGTGCGGCACCATTATTA]
[+] EMBL CNS08L5I [ACTACGTGAAAAAACCAAAACATTCGGCGGCTCTGGGTGTTATTGCAATAGTTAACTAAATTATCGGAAAAATAATATTCTCCACCTCATGCAACATGATTGCCAATG ATCTGTTTCGTAAGCTTTCGTGTGGTGCCAAATTTTCCAACAAAAACAGGCTGCCAGTCAAAAGAAAGCTTGAAAATGGCAGTACAACGAGCCTCCCAAAATTGAAGGTATGCATTAAGGAGGAAACGAGACACCGGCCGCAAAGTGAAGGCTTCCAAAGTGACGAAATCACTGGTAGCAACACCGGTAGAGGATACGCGAATAAAAAGCGAAGATTCTTCGAGTGACGA ]
[+] EMBL CNS08MC1 [ ACGTGAACAAACCAAAACATTCGGCGGCTCTGGGTGTTATTGCAATAGTTAACTAAATTATCGGAAAAATAATATTCTCCACCTCATGCAACATGATTGCCAATGCATCTGTTTCGTAAGCTTTCGTGTGGTGCCAAATTTTCCAACAAAAACAGGCTGCCAGTCAAAAGAAAGCTTGAAAATGGCAGTACAACGAGCCTCCCAAAATTGAAGGTATGCATTAAGGAGGAAACG GACACCGGCCGCAAAGTGAAGGCTTCCAAAGTGACGAAATCACTGGTAGCAACACCGGTAGAGGATACGCGAATAAAAAGCGAAGATTCTTCGAGTGACGATTCGGGAAGCGAACAGGAGAACCGGGAGCAGGAAAAATCAGTGCAACAAAAAAAGATTGTACCTCCGGAGAAGGTCGAGCTGATCAATCAGCTTCGCTTGAATCGGCTGCGAAACCAGCTCAAAATCCATGTGAAGAAAAGTCGACACAGTCCCGAAGTGCCCAACATCATCGAATCGTTCGATCAGCTCAGCACTGACTATGGTGTGTCGAACCGGTTGGTGGCGAACATTCAGAGCTGCTACAGCACACCGACACC GGTGCAAATGCAAGCCATACCGATACTGCTGAAAACGCACTCGCTGCATGCCTGCGCTCCGACCGGGTCGGGTAAAACGGCCGCCTTTCTGATTCCTATTCTACACCATCTGAAGAAACCAATGAATTGCGGGTTCAGGGCGCTTATCATTTGTCCAACGCGCGAACTGGCGAACAGAACGCAGCGGGAGGCACTGCGGCTCGGCGATGAAATGAACCTTCGTACGCACGTCATACACATGGTGGACGACCCGAAGAAGTGTGATTACAGTTTCGCTAGCGGCCGCAGCTACGATATACTGGTGACGACCCCCAATCGAATCTGCTATCTGCTGTCGCAGAATCCTCCGAAAATCGATCTTAGCAACATTCAATGGGTTGTGATAGATGA ]
[+] EMBL CNS08NC7 [ GACACAGTCCCGAAGTGCCCAACATCATCGAATCGTTCGATCAGCTCAGCACTGACTATGGTGTGTCGAACCGGTTGGTGGCGAACATTCAGAGCTGCTACAGCACACCGACACCGGGTGCAAATGCAAGCCATACCGATACTGCTGAAAACGCACTCGCTGCATGCCTGCGCTCCGACCGGGTCGGGTAAAACGGCCGCCTTTCTGATTCCTATTCTACACCATCTGAAGAAACCAATGAAGTGCGGGTTCAGGGCGCTTATCATTTGTCCAACGCGCGAACTGGCGAACAG ACGCAGCGGGAGGCACTGCGGCTCGGCGATGAAATGAACCTTCGTACGCACGTCATACACATGGTGGACGACCCGAAGAAGTGTGATTACAGTTTCGCTAGCGGCCGCAGCTACGATATACTGGTGACGACCCCCAATCGAATCTGCTATCTGCTGTCGCAGAATCCTCCGAAAATCGATCTTAGCAACATTCAATGGGTTGTGATAGATGAGGCGGATAAATTGTTTGAAGATTCCAAAAACTCGTTCCGCGACCAGCTCGACACGGTGCTGACGGCATGCAACAATCCGAGCAAAACGATAGCCCTTTTCAGTGCGACGCAAACGCGAGACGTCAATCTGTGGGTAGCAAAAAACGTTCCCAACCGCATCCGGTTCTCCATCGGCCTCATCAACGGTGCGGTCG AGCTGGTGGATCAAAAGCTGCTCTTCACCGGCAGCGAATCAGGCAAACTGCTTGCCTTCCGCGAGATGGTAGC ]
[+] EMBL CNS08XP4 [ CAGCTCAGCACTGACTATGGTGTGTCGAACCGGTTGGTGGCGAACATTCAGAGCTGCTACAGCACACCGACACC GGTGCAAATGCAAGCCATACCGATACTGCTGAAAACGCACTCGCTGCATGCCTGCGCTCCGACCGGGTCGGGTAAAACGGCCGCCTTTCTGATTCCTATTCTACACCATCTGAAGAAACCAATGAAGTGCGGGTTCAGGGCGCTTATCATTTGTCCAACGCGCGAACTGGCGAACAG ACGCAGCGGGAGGCACTGCGGCTCGGCGATGAAATGAACCTTCGTACGCACGTCATACACATGGTGGACGACCCGAAGAAGTGTGATTACAGTTTCGCTAGCGGCCGCAGCTACGATATACTGGTGACGACCCCCAATCGAATCTGCTATCTGCTGTCGCAGAATCCTCCGAAAATCGATCTTAGCAACATTCAATGGGTTGTGATAGATGAGGCGGATAAATTGTTTGAAGATTCCAAAAACTCGTTCCGCGACCAGCTCGACACGGTGCTGACGGCATGCAACAATCCGAGCAAAACGATAGCCCTTTTCAGTGCGACGCAAACGCGAGACGTCAATCTGTGGGTAGCAAAAAACGTTCCCAACCGCATCCGGTTCTCCATCGGCCTCATCAACGGTGCGGTCG AGCTGGTGGATCAAAAGCTGCTCTTCACCGGCAGCGAATCAGGCAAACTGCTTGCCTTCC ]
[+] EMBL AGA281605 [ GATATACTGGTGACGACCCCCAATCGAATCTGCTATCTGCTTTCGCATAATCCTCCGAAAATCGATCTTAGCAACATTCAATGGGTTGTGATAGATGAGGCGGATAAATTGTTTGAGGATTCCAAAAACTCGTTCCGCGATCAGCTCGACACGGTGCTGACGGCATGCAACAATCCGAGCAAAACGATAGCCCTTTTCAGTGCGACGCAAACGCGAGACGTCAATCTGTGGGTAGCAAAAAACGTTCCCAACCGCATCCGGTTCTCCATCGGCCTCATCAACGGTGCGGTCG AGCTGGTGGATCAAAAGCTGCTCTTCACCGGCAGCGAATCAGGCAAACTGCTTGCCTTCCGCGAGATGGTAGCGCAAGGGCTGCACCCACCGGTGCTCGTGTTTGTGCAGAGCAAGGATCGAGCACAGCAGCTGTTCACCGAGCTGATCTACGATGGGCTCAACGTGGACGTCATACACTCCGATCGTACGCAGCGCGAACGAGACAACGTGGTGCGCGCCTTCCGTGAGGGTAAAATTTGGATCCTCATCTGTACCGAGCTGATGAGCCGCGGTATCGACTTTAAGGGKTGTTAATTTGGTTGTCAATTACGACTTTCCGCCGTCCACCATATCGTATGTCCATCGTATCGGACGGACGG ]
[+] EMBL AGA281698 [ TATACTGGTGACGACCCCCAATCGAATCTGCTATCTGCTTTCGCATAATCCTCCGAAAATCGATCTTAGCAACATTCAATGGGTTGTGATAGATGAGGCGGATAAATTGTTTGAGGATTCCAAAAACTCGTTCCGCGATCAGCTCGACACGGTGCTGACGGCATGCAACAATCCGAGCAAAACGATAGCCCTTTTCAGTGCGACGCAAACGCGAGACGTCAATCTGTGGGTAGCAAAAAACGTTCCCAACCGCATCCGGTTCTCCATCGGCCTCATCAACGGTGCGGTCGTAGCTGGTGGATCAAAAGCTGCTCTTCACCGGCCGCGAATCAGGCAAACTGCTTGCCTTCCGCGAGATGGTAGCGCAAGGGCTGCACCCACCGGTGCTCGTGTTTGTGCAGAGCAAGGATCGAGCACAGCAGCTGTTCACCGAGCTGATCTACGATGGGCTCAACGTGGACGTCATACACTCCGATCG ]
[+] EMBL AGA280258 [ ATACTGGTGACGACCCCCAATCGAATCTGCTATCTGCTTTCGCATAATCCTCCGAAAATCGATCTTAGCAACATTCAATGGGTTGTGATAGATGAGGCGGATAAATTGTTTGAGGATTCCAAAAACTCGTTCCGCGATCAGCTCGACACGGTGCTGACGGCATGCAACAATCCGAGCAAAACGATAGCCCTTTTCAGTGCGACGCAAACGCGAGACGTCAATCTGTGGGTAGCAAAAAACGTTCCCAAC ]
[-] EMBL CNS08MC2 [ TTCAATGGGTTGTGATAGATGAGGCGGATAAATTGTTTGAAGATTCCAAAAACTCGTTCCGCGACCAGCTCGACACGGTGCTGACGGCATGCAACAATCCGAGCAAAACGATAGCCCTTTTCAGTGCGACGCAAACGCGAGACGTCAATCTGTGGGTAGCAAAAAACGTTCCCAACCGCATCCGGTTCTCCATCGGCCTCATCAACGGAGCGGTCG AGCTGGTGGATCAAAAGCTGCTCTTCACCGGCAGCGAATCAGGCAAACTGCTTGCCTTCCGCGAGATGGTAGCGCAAGGGCTGCACCCACCGGTGCTTGTGTTTGTGCAGAGCAAGGATCGAGCACAGCAGCTGTTCACCGAGCTGATCTACGATGGGCTCAACGTGGACGTCATACACTCCGATCGTACGCAGCGCGAACGAGACAACGTGGTGCGCGCCTTCCGTGAGGGTAAAATTTGGATCCTCATCTGTACCGAGCTGATGAGCCGCGGTATCGACTTTAAGGG TGTTAATTTGGTTGTCAATTACGACTTTCCGCCGTCCACCATATCGTATGTCCATCGTATCGGACGGACGGGTCGCGCCGGTCGACCCGGGAAAGCTGTCACCTTTTTCACCAAAGACGATACGGTTAATCTGAAAAGCATTGCACAGCTGATAAAATCTGCAGGTGGGGAGGTGCCGGACTACATGCTGCAAATGCATGGTAGCTCGAAGAAGGCACGAGACACTCTAGCTCAAAAAGCACCGAAACGGGCCATGATTCGAACGATTCCTACGTTCGAGCTTCAACAGCTCCAGCGCAAGAAGCGGTTCGTCAGCAAAAGCAAAGGTAAAAATAAACCTCTCGTGGTTAGTAGTAACAGTAGAAACAAAAGTGCAAACGCTGGTAAATCAAAGCGTTCAAAGCCGTCAG GAGCAAAAAATAA ]
[-] EMBL CNS08NC8 [ AGACGTCAATCTGTGGGTAGCAAAAAACGTTCCCAACCGCATCCGGTTCTCCATCGGCCTCATCAACGGTGCGGTCG AGCTGGTGGATCAAAAGCTGCTCTTCACCGGCAGCGAATCAGGCAAACTGCTTGCCTTCCGCGAGATGGTAGCGCAAGGGCTGCACCCACCGGTGCTTGTGTTTGTGCAGAGCAAGGATCGAGCACAGCAGCTGTTCACCGAGCTGATCTACGATGGGCTCAACGTGGACGTCATACACTCCGATCGTACGCAGCGCGAACGAGACAACGTGGTGCGCGCCTTCCGTGAGGGTAAAATTTGGATCCTCATCTGTACCGAGCTGATGAGCCGCGGTATCGACTTTAAGGG TGTTAATTTGGTTGTCAATTACGACTTTCCGCCGTCCACCATATCGTATGTCCATCGTATCGGACGGACGGGTCGCGCCGGTCGACCCGGGAAAGCTGTCACCTTTTTCACCAAAGACGATACGGTTAATCTGAAAAGCATTGCACAGCTGATAAAATCTGCAGGTGGGGAGGTGCCGGACTACATGCTGCAAATGCATGGTAGCTCGAAGAAGGCACGAGACACTCTAGCTCAAAAAGCACCGAAACGGGCCATGATTCGAACGATTCCTACGTTCGAGCTTCAACAGCTCCAGCGCAAGAAGCGGTTCGTCAGCAAAAGCAAAGGTAAAAATAAACCTCTCGTGGTTAGTAGTAACAGTAGAAACAAAAGTGCAAACGCTGGTAAATCAAAGCGTTCAAAGCCGTCAGCGAGCAAAAAATAAAAAGTGCGGCACCA ]
[+] EMBL BX628609 [ AACGTTCCCAACCGCATCCGGTTCTCCATCGGCCTCATCAACGGTGCGGTCG AGCTGGTGGATCAAAAGCTGCTCTTCACCGGCAGCGAATCAGGCAAACTGCTTGCCTTCCGCGAGATGGTAGCGCAAGGGCTGCACCCACCGGTGCTCGTGTTTGTGCAGAGCAAGGATCGAGCACAGCAGCTGTTCACCGAGCTGATCTACGATGGGCTCAACGTGGACGTCATACACTCCGATCGTACGCAGCGCGAACGAGACAACGTGGTGCGCGCCTTCCGTGAGGGTAAAATTTGGATCCTCATCTGTACCGAGCTGATGAGCCGCGGTATCGACTTTAAGGG TGTTAATTTGGTTGTCAATTACGACTTTCCGCCGTCCACCATATCGTATGTCCATCGTATCGGACGGACGGGTCGCGCCGGTCGACCCGGGAAAGCTGTCACCTTTTTCACCAAAGACGATACGGTTAATCTGAAAAGCATTGCACAGCTGATAAAATCTGCAGGTGGGGAGGTGCCGGACTACATGCTGCAAATGCATGGTAGCTCGAAGAAGGCACGAGACACTCTAGCTCAAAAAGCACCTAAACGGGCCATGATTCGAACGATTCCTACGTTCGAGCTTCAACAGCTCCAGCGCAAG ]
[-] EMBL AGA281955 [ TTGCACAGCTGATAAAATCTGCAGGTGGGGAGGTGCCGGACTACATGCTGCAAATGCATGGTAGCTCGAAGAAGGCACGAGACACTCTAGCTCAAAAAGCACCTAAACGGGCCATGATTCGAACGATTCCTACGTTCGAGCTTCAACAGCTCCAGCGCAAGAAGCGGTTTGTCAGCAAAAGCAAAGGTAAAAATAAACCTCTCGTGGTTAGTAGTAACAGTAGTAACAAAAGTGCAAACGCTGGTAAATCAAAGCGTTCAAAGCCGTCAGCGAGCAAAAAATAAAAAG ]
[-] EMBL CNS08XP5 [ ACCGAAACGGGCCATGATTCGAACGATTCCTACGTTCGAGCTTCAACAGCTCCAGCGCAAGAAGCGGTTCGTCAGCAAAAGCAAAGGTAAAAATAAACCTCTCGTGGTTAGTAGTAACAGTAGAAACAAAAGTGCAAACGCTGGTAAATCAAAGCGTTCAAAGCCGTCAGCGAGCAAAAAATAAAAAGTGCGGCACCATTATTA]
consensusID : consensus_9307#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 720 fasta sequence
[AGCAGAATCGCCACGAGGTATACAAACAAAACATTCGGCGTCTCTGGGGTGTTTTTTACAATAGTTCAACTGAATTATCGGAAAAATAATATTCTCCACCTCATGCAACATGATTGCCAATGATCTGTTTCGTAAGCTTTCGTGTGGTGCCCAAGTTTTCCAACAAAAACAGGCTCCCGGTCAAAAGAAAGCTTGAAAATGGCAGTACAACGAGCCTCCCAAAATTGAAGGTATGCATTAAGGAGGAAACGGACACCGGCGCAAAGTGAAGGCTTCCAAAGTGACGAAATCACTGGTAGCAACACCGGTAGAGGATACGCGAATAANGAAGCGAAGGATTCTTCGAGTGACGATTCGGGAAGGCGAACAGGAGGAACCGGGAGGCAGCNAAAAAGATCAGTGCAAACAGAAGNGACAAGATTGTACCTCCGGAGAAGGTACGAGCGTGATCAATCAGNTTCGCTTGAATCGGNNTGCGAAACCAAGNTCGAGAAAGTCCATGTGAAGAAAAAAGTCGACACAGGGCCCCCGGAAAGGTGGGCGCCAAGCAATCANTCGNAAATCGGTGGGCGGAGTCCAANGGGTTCAAGGCGACANTGAACATAATCGAGGTAGTGGTNCGGAAAACCGGGGTTTGGGGTTGGGNCGAAAACANTTTCAGAAGGCTTGCNTTACNAAGGTCACACCAGGAGANNCACACAGGTGGGCACAATNGGAAAG]
[+] EMBL BX469174 [AGCAGAATCGCCACGAGGTATACAAACAAAACATTCGGCGTCTCTGGGGTGTTTTTTACAATAGTTCAACTGAATTATCGGAAAAATAATATTCTCCACCTCATGCAACATGATTGCCAATGATCTGTTTCGTAAGCTTTCGTGTGGTGCCCAAGTTTTCCAACAAAAACAGGCTCCCGGTCAAAAGAAAGCTTGAAAATGGCAGTACAACGAGCCTCCCAAAATTGAAGGTATGCATTAAGGAGGAAACGGACACCGGCGCAAAGTGAAGGCTTCCAAAGTGACGAAATCACTGGTAGCAACACCGGTAGAGGATACGCGAATAANGAAGCGAAGGATTCTTCGAGTGACGATTCGGGAAGGCGAACAGGAGGAACCGGGAGGCAGCNAAAAAGATCAGTGCAAACAGAAGNGACAAGATTGTACCTCCGGAGAAGGTACGAGCGTGATCAATCAGNTTCGCTTGAATCGGNNTGCGAAACCAAGNTCGAGAAAGTCCATGTGAAGAAAAAAGTCGACACAGGGCCCCCGGAAAGGTGGGCGCCAAGCAATCANTCGNAAATCGGTGGGCGGAGTCCAANGGGTTCAAGGCGACANTGAACATAATCGAGGTAGTGGTNCGGAAAACCGGGGTTTGGGGTTGGGNCGAAAACANTTTCAGAAGGCTTGCNTTACNAAGGTCACACCAGGAGANNCACACAGGTGGGCACAATNGGAAAG]
consensusID : consensus_9307#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 560 fasta sequence
[AATCGCCCGAGGTGATCGAGCACAGCAGCTGTTCACCGAGCTGATCTACGATGGGCTCAACGTGGACGTCATACACTCCGATCGTACGCAGCGCGAACGAGACAACGTGGTGCGCGCCTTCCGTGAGGGTAAAATTTGGATCCTCATCTGTACCGAGCTGATGAGCCGCGGTATCGACTTTAAGGGTGTTAATTTGGTTGTCAATTACGACTTTCCGCCGTCCACCATATCGTATGTCCATCGTATCGGACGGACGGGTCGCGCCGGTCGACCCGGGAAAGCTGTCACCTTTTTCACCAAAGAGGATACGGTTAATCTGAAAAGCATTGCACAGCTGATAAAATCTGCAGGTGGGGAGGTGCCGGACTACATGCTGCAAATGCATGGTAGCTCGAAGAAGGCACGAGACACTCTAGCTCAAAAAGCACCGAAACGGGCCATGATTCGAACGATTCCTACGTTCGAGCTTCAACAGCTCCAGCGCAAAAAGCGGTTCGTCAGCAAAAGCAAAGGTAAAAATAAACCACTCGTGGTTAGTAGTAACAGTAGTAACAAAAGTG]
[+] EMBL AL932153 [AATCGCCCGAGGTGATCGAGCACAGCAGCTGTTCACCGAGCTGATCTACGATGGGCTCAACGTGGACGTCATACACTCCGATCGTACGCAGCGCGAACGAGACAACGTGGTGCGCGCCTTCCGTGAGGGTAAAATTTGGATCCTCATCTGTACCGAGCTGATGAGCCGCGGTATCGACTTTAAGGGTGTTAATTTGGTTGTCAATTACGACTTTCCGCCGTCCACCATATCGTATGTCCATCGTATCGGACGGACGGGTCGCGCCGGTCGACCCGGGAAAGCTGTCACCTTTTTCACCAAAGAGGATACGGTTAATCTGAAAAGCATTGCACAGCTGATAAAATCTGCAGGTGGGGAGGTGCCGGACTACATGCTGCAAATGCATGGTAGCTCGAAGAAGGCACGAGACACTCTAGCTCAAAAAGCACCGAAACGGGCCATGATTCGAACGATTCCTACGTTCGAGCTTCAACAGCTCCAGCGCAAAAAGCGGTTCGTCAGCAAAAGCAAAGGTAAAAATAAACCACTCGTGGTTAGTAGTAACAGTAGTAACAAAAGTG]
consensusID : consensus_9307#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 355 fasta sequence
[GACCCGGGAAAGCTGTCACCTTTTTCACCAAAGACGATACGGTTAATCTGAAAAGGTTTGGCGAAAAAATGCGACCCCATTGATACGATTGTTTGCAACGCGAATGCTCTAATCGGGGTTTTGTTTGTGTAGCATTGCACAGCTGATAAAATCTGCAGGTGGGGAGGTGCCGGACTACATGCTGCAAATGCATGGTAGCTCGAAGAAGGCACGAGACACTCTAGCTCAAAAAGCACCTAAACGGGCCATGATTCGAACGATTCCTACGTTCGAGCTTCAACAGCTCCAGCGCAAGAAGCGGTTTGTCAGCAAAAGCAAAGGTAAAAATAAACCTCTCGTGGTTAGTAGTAACAGT]
[-] EMBL AGA283275 [GACCCGGGAAAGCTGTCACCTTTTTCACCAAAGACGATACGGTTAATCTGAAAAGGTTTGGCGAAAAAATGCGACCCCATTGATACGATTGTTTGCAACGCGAATGCTCTAATCGGGGTTTTGTTTGTGTAGCATTGCACAGCTGATAAAATCTGCAGGTGGGGAGGTGCCGGACTACATGCTGCAAATGCATGGTAGCTCGAAGAAGGCACGAGACACTCTAGCTCAAAAAGCACCTAAACGGGCCATGATTCGAACGATTCCTACGTTCGAGCTTCAACAGCTCCAGCGCAAGAAGCGGTTTGTCAGCAAAAGCAAAGGTAAAAATAAACCTCTCGTGGTTAGTAGTAACAGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9307#2 ------------------------------------------------------------
consensus_9307#3 ------------------------------------------------------------
consensus_9307#0 ACTACGTGAAAAAACCAAAACATTCGGCGGCTCTGGGTGTTATTGCAATAGTTAACTAAA 60
consensus_9307#1 ------------------------------------------------------------
consensus_9307#2 ------------------------------------------------------------
consensus_9307#3 ------------------------------------------------------------
consensus_9307#0 TTATCGGAAAAATAATATTCTCCACCTCATGCAACATGATTGCCAATGATCTGTTTCGTA 120
consensus_9307#1 ------------------------------------------------------------
consensus_9307#2 ------------------------------------------------------------
consensus_9307#3 ------------------------------------------------------------
consensus_9307#0 AGCTTTCGTGTGGTGCCAAATTTTCCAACAAAAACAGGCTGCCAGTCAAAAGAAAGCTTG 180
consensus_9307#1 ------------------------------------------------------------
consensus_9307#2 ------------------------------------------------------------
consensus_9307#3 ------------------------------------------------------------
consensus_9307#0 AAAATGGCAGTACAACGAGCCTCCCAAAATTGAAGGTATGCATTAAGGAGGAAACGGACA 240
consensus_9307#1 ------------------------------------------------------------
consensus_9307#2 ------------------------------------------------------------
consensus_9307#3 ------------------------------------------------------------
consensus_9307#0 CCGGCCGCAAAGTGAAGGCTTCCAAAGTGACGAAATCACTGGTAGCAACACCGGTAGAGG 300
consensus_9307#1 ------------------------------------------------------------
consensus_9307#2 ------------------------------------------------------------
consensus_9307#3 ------------------------------------------------------------
consensus_9307#0 ATACGCGAATAAAAAGCGAAGATTCTTCGAGTGACGATTCGGGAAGCGAACAGGAGAACC 360
consensus_9307#1 ------------------------------------------------------------
consensus_9307#2 ------------------------------------------------------------
consensus_9307#3 ------------------------------------------------------------
consensus_9307#0 GGGAGCAGGAAAAATCAGTGCAACAAAAAAAGATTGTACCTCCGGAGAAGGTCGAGCTGA 420
consensus_9307#1 ------------------------------------------------------------
consensus_9307#2 ------------------------------------------------------------
consensus_9307#3 ------------------------------------------------------------
consensus_9307#0 TCAATCAGCTTCGCTTGAATCGGCTGCGAAACCAGCTCAAAATCCATGTGAAGAAAAGTC 480
consensus_9307#1 ------------------------------------------------------------
consensus_9307#2 ------------------------------------------------------------
consensus_9307#3 ------------------------------------------------------------
consensus_9307#0 GACACAGTCCCGAAGTGCCCAACATCATCGAATCGTTCGATCAGCTCAGCACTGACTATG 540
consensus_9307#1 ------------------------------------------------------------
consensus_9307#2 ------------------------------------------------------------
consensus_9307#3 ------------------------------------------------------------
consensus_9307#0 GTGTGTCGAACCGGTTGGTGGCGAACATTCAGAGCTGCTACAGCACACCGACACCGGTGC 600
consensus_9307#1 ------------------------------------------------------------
consensus_9307#2 ------------------------------------------------------------
consensus_9307#3 ------------------------------------------------------------
consensus_9307#0 AAATGCAAGCCATACCGATACTGCTGAAAACGCACTCGCTGCATGCCTGCGCTCCGACCG 660
consensus_9307#1 ------------------------------------------------------------
consensus_9307#2 ------------------------------------------------------------
consensus_9307#3 ------------------------------------------------------------
consensus_9307#0 GGTCGGGTAAAACGGCCGCCTTTCTGATTCCTATTCTACACCATCTGAAGAAACCAATGA 720
consensus_9307#1 ------------------------------------------------------------
consensus_9307#2 ------------------------------------------------------------
consensus_9307#3 ------------------------------------------------------------
consensus_9307#0 AGTGCGGGTTCAGGGCGCTTATCATTTGTCCAACGCGCGAACTGGCGAACAGACGCAGCG 780
consensus_9307#1 ------------------------------------------------------------
consensus_9307#2 ------------------------------------------------------------
consensus_9307#3 ------------------------------------------------------------
consensus_9307#0 GGAGGCACTGCGGCTCGGCGATGAAATGAACCTTCGTACGCACGTCATACACATGGTGGA 840
consensus_9307#1 ------------------------------------------------------------
consensus_9307#2 ------------------------------------------------------------
consensus_9307#3 ------------------------------------------------------------
consensus_9307#0 CGACCCGAAGAAGTGTGATTACAGTTTCGCTAGCGGCCGCAGCTACGATATACTGGTGAC 900
consensus_9307#1 ------------------------------------------------------------
consensus_9307#2 ------------------------------------------------------------
consensus_9307#3 ------------------------------------------------------------
consensus_9307#0 GACCCCCAATCGAATCTGCTATCTGCTGTCGCAGAATCCTCCGAAAATCGATCTTAGCAA 960
consensus_9307#1 ------------------------------------------------------------
consensus_9307#2 ------------------------------------------------------------
consensus_9307#3 ------------------------------------------------------------
consensus_9307#0 CATTCAATGGGTTGTGATAGATGAGGCGGATAAATTGTTTGAAGATTCCAAAAACTCGTT 1020
consensus_9307#1 ------------------------------------------------------------
consensus_9307#2 ------------------------------------------------------------
consensus_9307#3 ------------------------------------------------------------
consensus_9307#0 CCGCGACCAGCTCGACACGGTGCTGACGGCATGCAACAATCCGAGCAAAACGATAGCCCT 1080
consensus_9307#1 ------------------------------------------------------------
consensus_9307#2 ------------------------------------------------------------
consensus_9307#3 ------------------------------------------------------------
consensus_9307#0 TTTCAGTGCGACGCAAACGCGAGACGTCAATCTGTGGGTAGCAAAAAACGTTCCCAACCG 1140
consensus_9307#1 ---------------------------------------AGCAGAATCGCCACGAGGTAT 21
consensus_9307#2 ------------------------------------------------------------
consensus_9307#3 ------------------------------------------------------------
consensus_9307#0 CATCCGGTTCTCCATCGGCCTCATCAACGGTGCGGTCGAGCTGGTGGATCAAAAGCTGCT 1200
consensus_9307#1 ACAAACAAAACATTCGGCGTCTCTGGGGTGTTTTTTACAATAGTTCAACTGAATTATCGG 81
consensus_9307#2 ------------------------------------------------------------
consensus_9307#3 ------------------------------------------------------------
consensus_9307#0 CTTCACCGGCAGCGAATCAGGCAAACTGCTTGCCTTCCGCGAGATGGTAGCGCAAGGGCT 1260
consensus_9307#1 AAAAATAATATTCTCCACCTCATGCAACATGATTGCCAATGATCTGTTTCGTAAGCTTTC 141
consensus_9307#2 ---------------------AATCGCCCGAGGTGATCGAGCACAGCAGCTGTTCACCGA 39
consensus_9307#3 ------------------------------------------------------------
consensus_9307#0 GCACCCACCGGTGCTCGTGTTTGTGCAGAGCAAGGATCGAGCACAGCAGCTGTTCACCGA 1320
consensus_9307#1 GTGTGGTGCCCAAGTTTTCCAACAAAAACAGGCTCCCGGTCAAAAGAAAGCTTGAAAATG 201
consensus_9307#2 GCTGATCTACGATGGGCTCAACGTGGACGTCATACACTCCGATCGTACGCAGCGCGAACG 99
consensus_9307#3 ------------------------------------------------------------
consensus_9307#0 GCTGATCTACGATGGGCTCAACGTGGACGTCATACACTCCGATCGTACGCAGCGCGAACG 1380
consensus_9307#1 GCAGTACAACGAGCCTCCCAAAATTGAAGGTATGCATTAAGGAGGAAACGGACACCGGCG 261
consensus_9307#2 AGACAACGTGGTGCGCGCCTTCCGTGAGGGTAAAATTTGGATCCTCATCTGTACCGAGCT 159
consensus_9307#3 ------------------------------------------------------------
consensus_9307#0 AGACAACGTGGTGCGCGCCTTCCGTGAGGGTAAAATTTGGATCCTCATCTGTACCGAGCT 1440
consensus_9307#1 CAAAGTGAAGGCTTCCAAAGTGACGAAATCACTGGTAGCAACACCGGTAGAGGATACGCG 321
consensus_9307#2 GATGAGCCGCGGTATCGACTTTAAGG----GTGTTAATTTGGTTGTCAATTACGACTTTC 215
consensus_9307#3 ------------------------------GACCCGGGAAAGCTGTCACCT-----TTTT 25
consensus_9307#0 GATGAGCCGCGGTATCGACTTTAAGG----GTGTTAATTTGGTTGTCAATTACGACTTTC 1496
consensus_9307#1 AATAANGAAGCGAAGGATTCTTCGAGTGACGATTCGGGAAGGCGAACAGGAGGAACCGGG 381
* * **
consensus_9307#2 CGCCGTCCACCATATCGTATGTCC-ATCGTATCGGACGGACGGGT-CGCGCCGGTC-GAC 272
consensus_9307#3 CACCAAAGACGATACGGTTAATCTGAAAAGGTTTGGCGAAAAAATGCGACCCCATT-GAT 84
consensus_9307#0 CGCCGTCCACCATATCGTATGTCC-ATCGTATCGGACGGACGGGT-CGCGCCGGTC-GAC 1553
consensus_9307#1 AGGCAGCNA--AAAAGATCAGTGCAAACAGAAGNGACAAGATTGTACCTCCGGAGAAGGT 439
* * * * * * * * * * * * *
consensus_9307#2 CCGGGAAAGCTGTCACCTTTTTCACCAAAGAGGAT----ACGGTTAATCTGAAAAGCATT 328
consensus_9307#3 ACGATTGT-TTGCAACGCGAATGCTCTAATCGGG-------GTTTTGTTTGTGTAGCATT 136
consensus_9307#0 CCGGGAAAGCTGTCACCTTTTTCACCAAAGACGAT----ACGGTTAATCTGAAAAGCATT 1609
consensus_9307#1 ACGAGCGTGATCAATCAGNTTCGCTTGAATCGGNNTGCGAAACCAAGNTCGAGAAAGTCC 499
** * * ** * * *
consensus_9307#2 GCACAGCTGATAAAATCTGCAGGTGGG----GAGGTGCCGGACTACATGCTGCAAATGCA 384
consensus_9307#3 GCACAGCTGATAAAATCTGCAGGTGGG----GAGGTGCCGGACTACATGCTGCAAATGCA 192
consensus_9307#0 GCACAGCTGATAAAATCTGCAGGTGGG----GAGGTGCCGGACTACATGCTGCAAATGCA 1665
consensus_9307#1 ATGTGAAGAAAAAAGTCGACACAGGGCCCCCGGAAAGGTGGGCGCCAAGCAATCANTCGN 559
* *** ** ** ** * * ** * ** ** * *
consensus_9307#2 TGGTAGCTCGAAGAAGGCACGAGACACTCTAGCTCAAAAAGCACCGAAACGGGCCA-TGA 443
consensus_9307#3 TGGTAGCTCGAAGAAGGCACGAGACACTCTAGCTCAAAAAGCACCTAAACGGGCCA-TGA 251
consensus_9307#0 TGGTAGCTCGAAGAAGGCACGAGACACTCTAGCTCAAAAAGCACCGAAACGGGCCA-TGA 1724
consensus_9307#1 AAATCGGTGGGCGGAGTC-CAANGGGTTCAAGGCGACANTGAACATAATCGAGGTAGTGG 618
* * * * * ** * * * ** ** * * * ** ** ** * * **
consensus_9307#2 TTCGAACGATTCCTACGTTCGAGCTTCA-ACAGCTCCAGCGCAAAAAGCGGTTCGTCAGC 502
consensus_9307#3 TTCGAACGATTCCTACGTTCGAGCTTCA-ACAGCTCCAGCGCAAGAAGCGGTTTGTCAGC 310
consensus_9307#0 TTCGAACGATTCCTACGTTCGAGCTTCA-ACAGCTCCAGCGCAAGAAGCGGTTCGTCAGC 1783
consensus_9307#1 TNCGGAAAA--CCGGGGTTTGGGGTTGGGNCGAAAACANTTTCAGAAGGCTTGCNTTA-C 675
* ** * * ** *** * * ** * ** * *** * * * *
consensus_9307#2 AAAAGCAAAGGTAAAAATAAACCACTCGTGGTTAGTAGTAACAGTAGTAACAAAAGTG-- 560
consensus_9307#3 AAAAGCAAAGGTAAAAATAAACCTCTCGTGGTTAGTAGTAACAGT--------------- 355
consensus_9307#0 AAAAGCAAAGGTAAAAATAAACCTCTCGTGGTTAGTAGTAACAGTAGAAACAAAAGTGCA 1843
consensus_9307#1 NAAGGTCACACCAGGAGANNCACACAGGTGGGCACAATNGGAAAG--------------- 720
** * * * * * * **** * * *
consensus_9307#2 ------------------------------------------------------------
consensus_9307#3 ------------------------------------------------------------
consensus_9307#0 AACGCTGGTAAATCAAAGCGTTCAAAGCCGTCAGCGAGCAAAAAATAAAAAGTGCGGCAC 1903
consensus_9307#1 ------------------------------------------------------------
consensus_9307#2 --------
consensus_9307#3 --------
consensus_9307#0 CATTATTA 1911
consensus_9307#1 --------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||