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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9321#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1997 fasta sequence
[CCGAAGAAAACAAACCTCGATTTTGACAATGTTGTATAA-TAT-ACGATAAACGAAACAAAAACCAAAAACGTTTTTCCTCTTCCACCATTCTCGAGAGTACATTTAGTGCGCTTCGTAAGATTCCTAGCTCTATGATAACAAAAACTATACATATATAAAGCAAATCTCTCCTTGCAGTGAAGTTAGAAATGTCGTGTAACGCAACTTCCTGTCTTGCTTGATGCCCAATGATTCCTTTCTAAACCGTAACAAACAAACTGAAAATAAATGTTGAAAGAAGAAGAAAGAGTATGAACCACATAGAACGAACAGCAGACCAGTGTAGACATTGTGTATCGTAAAACACTCACAGACAGACACAGGAAAACATGAATCACGTCGAAGGAGCACACAGTGAAGGGTAGCAGCTACAGTAGTAACAGCAGTAGTAGAAGTAGAACAAACAAAACGGAGCAGCGTAACAAAGAGAAACAACGTACCCAGAAACAAACAAAACAAAAAAGAATCAGAAAAGTGTATA-TTTTTATACTCCTTATACGAAGACGTGATTATTGAAAGAGTAGACAAACAGACGAACGAAAGAAACCATGAAAGGCAAAGAATAGAGAA-GGAGCAAATAC-AAAGAAACAAAACAACAAATAACA-----CAA-CAA-CAA-CAGTAG-CAA-CCAAAAT-AT-CACACACCCCACACACACACTAT-CNNNCTCTAACACACAATTATATAATTT-CACGTAT--AAATAT-GT-AATCTAGCACAATAAGAGCATTTGGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTGTTCTTAATGTGTAATTTAAGACTCGGAATCATCAAAACACCGTTCTCTCGATCGTGTGCGTCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGATGTTTGATTGTTTCACTGTGCCAGTCGATTTTGTCACGAAAATATGAATAGTAACG-TTGTACCCCGTTCACGTCATCCAAAACCCCGATCGACCCCGATTTTAATACGCTCGTACATACAGTGTTTGCTATAGATATTTGGTTGTTGGCTATATTTTTTAGGTTTAGCTCCCGCAAAATCAATACAAATGATTCAAACAATAAAATCTGCGAAACGCTCCATAAATCTTGGGACGAACCCCAACTCAAAATTGGGTAAACCAAATATTCTTGCGAAGCGAACAAAAAAATATGGAAAAAATCCTGAAATTGTCCATTATCGGTTTCGTACTCACAGTGCAGCGGAGAAAGTATTGAATTGATAAACTATGTTTTTTTCTCTGTTTCTGTTTTAGTCTACTTTCTTTGCTGCGTGACAGCGCTATGATCAATGAAAACGCCTTTCGGGTGGGACATGAAAGCGTCTATAAAACACTCATGTCAAAGAAAATCGTTAACNAGATAATAGAAAACAGAAAAGCGTAAAACAGGAGGAACACAATACAATACGACGAACAAAAAAAAAAAAACAAATGCGAATATGATTTCAAAACGAAAACAATAACAAACAAACAGAGATGCGCGCGTACAAATGAAAACCAGAAACTATAAAATAAAACCAAGACAGTCGCACCTTTCTCCTTCACATCGTCCCATCCCGTCCCATTGCACCTCCACTCTAGGCTAGAAGATTTGCTCCGGATGCATTAGTAATCTCGAATTAGTGTCATGTTGATTATAATCCATTTCGCGTGATGAAAGCCCCGAATGTTACATAAAAGATACCATCAAGTGTACGGTGGGAGGCAGGAAATATTCACAACTCACAACTCACGAATAACAATCGGTTCAATGGTCAGTAAAAAAAAATCCCTTAACACTGCGTAAATCACAATGTAAGCCCCTTCCGACCCAACTAACCAGCAACACACACACACACACACACTTATATTAGCCGGCGACAGCGGTGTGTATGAATGATGCAAGATGATGTTTTCTGATTTCAATAAAGTATAACTGAAGCGATCAATAAATGT]
[+] EMBL BM647778 [CCGAAGAAAACAAACCTCGATTTTGACAATGTTGTATAA TATAACGATAAACGAAACAAAAACCAAAAACGTTTTTCCTCTTCCACCATTCTCGAGAGTACATTTAGTGCGCTTCGTAAGATTCCTAGCTCTATGATAACAAAAACTATACATATATAAAGCAAATCTCTCCTTGCAGTGAAGTTAGAAATGTCGTGTAACGCAACTTCCTGTCTTGCTTGATGCCCAATGATTCCTTTCTAAACCGTAACAAACAAACTGAAAATAAATGTTGAAAGAAGAAGAAAGAGTATGAACCACATAGAACGAACAGCAGACCAGTGTAGACATTGTGTATCGTAAAACACTCACAGACAGACACAGGAAAACATGAATCACGTCGAAGGAGCACACAGTGAAGGGTAGCAGCTACAGTAGTAACAGCAGTAGTAGAAGTAGAACAAACAAAACGGAGCAGCGTAACAAAGAGAAACAACGTACCCAGAAACAAACAAAACAAAAAAGAATCAGAAAAGTGTATATTTTTTATACTCCTTATACGAAGACGTGATTATTGAAAGAGTAGACAAACAGACGAACGAAAGAAACCATGAAAGGCAAAGAATAGAGAA GGAGCAAATACTAAAGAAACAAAACAACAAATAACA CAA CAA CAA CAGTAG CAA CCAAAAT A ]
[+] EMBL AGAA13345 [ gttccgGTATAACTAT TCGATAAACGAAACAAAAACCAAAAACGTTTTTCCTCTTCCACCATTCTCGAGAGTACATTTAGTGCGCTTCGTAAGATTCCTAGCTCTATGATAACAAAAACTATACATATATAAAGCAAATCTCTCCTTACAGTGAAGTTAGAAATGTCGTGTAAGCCAACTTCCTGTCTTGCTTGATGCCCAATGATTCCTTTCTAAACCGTAACAAACAAACTGAAAATAAATGTTGAAAGAAGAAGAAAGAGTATGAACCACATAGAACGAACAACAGACCAGTGTAGACATTGTGTATCGTAAAACACTCACAGACAGACACAGGAAAACATGAATCACGTCGAAGGAGCACACAGTGAAGGGTAGCAGCTACAGTAGTAACAGCAGTAGTAGAAGTAGAACAAACAAAACGGAGCAGCGTAACAAAGAGAAACAACGTACCCAGAAACAAACAAAACAAAAAAGAATCAGAAAAGTGTATA TTTTTATACTCCTTATACGAAGACGTGATTATTGAAAGAGTAGACACACAGACGAACGAAAGAAACCATTAAAGGCAAAGAATAGAGAAGGGAGCAAATAC AAAGGAACCAAACAACAAATAACACCAACCAACCAACCAACCAGTAGCCAACCCAAAAT AT CACACACCCCACACACACACTAT CNNNCTCTAACACACAATTATATAATTT CACGTAT AAATAT GT AATCTAGCAC ATAAGAGCATT GGGCGAGCG AAAGACCAGA TGTAGAGACAGGTGACGGTGTTCTTAATGTGTAATTTAAGACTCGGAATCATCAAAACACCGTTCTCTCGATCGTGTGCGTCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGATGTTTGATTGTTTCACTGTGCCAGTCGATTTTGTCACGAAAATATGAATAGTAACGTTTGTACCCCGTTCACGTCA CCAAAACCCCGATCGACCCCGATTTTAATACGCTCGTAC TACAGTGTTTGCTATAGATATTTGGTTGTTGGCTATATTTTTTAGGTTTACGTCCCGCAAAATCAATACAAATGATTCAAACAATAAAATCT GAAACGCTCCATAAATCTTGGGACGA CCCAACTC AAATT GGT AACCAAATATTCTTGCGAAGCGAAGCAAAAAATATGGAAAAAATCCTGAAATTGTCCATTATCGGTTTCGTACTCACAGTGCAGCGGAGAAAGTATTGAATTGATAAACTATG TTTTTTCTCTGTTTCTGTTTTAGTCTACTTTCTTTGCTGCGTGACAGCGCTATGATCAATGAAAACGCCTTTCGGGTGGGACATGAAAGCGTCTATAAAACACTCATGTCAAAGAAAATCGTTAACAAGATAATAGAAAACAGAAAAGCGTAAAACAGGAGGAACACAATACAATACGACGAACAAAAAAAAAAAAA ]
[+] EMBL BM645788 [ ccgCCTAGCTCTATGATAACAAAAACTATACATATATAAAGCAAATCTCTCCTTGCAGTGAAGTTAGAAATGTCGTGTAACGCAACTTCCTGTCTTGCTTGATGCCCAATGATTCCTTTCTAAACCGTAACAAACAAACTGAAAATAAATGTTGAAAGAAGAAGAAAGAGTATGAACCACATAGAACGAACAGCAGACCAGTGTAGACATTGTGTATCGTAAAACACTCACAGACAGACACAGGAAAACATGAATCACGTCGAAGGAGCACACAGTGAAGGGTAGCAGCTACAGTAGTAACAGCAGTAGTAGAAGTAGAACAAACAAAACGGAGCAGCGTAACAAAGAGAAACAACGTACCCAGAAACAAACAAAACAAAAAAGAATCAGAAAAGTGTATATTTTTTATACTCCTTATACGAAGACGTGATTATTGAAAGAGTAGACAAACAGACGAACGAAAGAAACCATGAAAGGCAAAGAATAGAGAA GGAGCAAATACAAAAGAAACAAAACAACAAATAACA CAA CAA CAA CAGTAG CGA CCAAAATAATCCACACA CCCACACACACA TATACACACACT CACACAACAGCATCATTTGCATGTGA AGCAAT GTCAATGTAG TGAAGCAGAGCAaaa ]
[+] EMBL BX622586 [ tc CACGTATAAAAATATGGT AATCTAGCACAATAAGAGCATTTGGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTGTTCTTAATGTGTAATTTAAGACTCGGAATCATCAAAACACCGTTCTCTCGATCGTGTGCGTCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGATGTTTGATTGTTTCACTGTGCCAGTCGATTTTGTCACGAAAATATGAATAGTAACG TTGTACCCCGTTCACGTCATCCAAAACCCCGATCGACCCCGATTTTAATACGCTCGTACATACAGTGTTTGCTATAGATATTTGGTTGTTGGCTATATTTTTTAGGTTTAGCTCCCGCAAAATCAATACAAATGATTCAAACAATAAAATCTGCGAAACGCTCCATAAATCTTGGGACGAACCCCAACTCAAAATTGGGTAAACCAAATATTCTTGCGAAGCGAACAAAAAAATATGGAAAAAATCCTGAAATTGTCCATTATCGGTTTCGTACTCACAGTGCAGCGGAGAAAGTATTGAATTGATAAACTATGTTTTTTTCTCTGTTTCTGTTTTAGTCTACTTTCTTTGCTGCGTGACAGCGCTATGATCAATGAAAACGCCTTTCGGGTGGGACATGAAAGCGTCTATAAAACACTCATGTCAAAG AAATCGTTAACCAGATA ]
[+] EMBL BX627984 [ AATCTAGCACAATAAGAGCATTTGGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTGTTCTTAATGTGTAATTTAAGACTCGGAATCATCAAAACACCGTTCTCTCGATCGTGTGCGTCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGATGTTTGATTGTTTCACTGTGCCAGTCGATTTTGTCACGAAAATATGAATAGTAACG TTGTACCCCGTTCACGTCATCCAAAACCCCGATCGACCCCGATTTTAATACGCTCGTACATACAGTGTTTGCTATAGATATTTGGTTGTTGGCTATATTTTTTAGGTTTAGCTCCCGCAAAATCAATACAAATGATTCAAACAATAAAATCTGCGAAACGCTCCATAAATCTTGGGACGAACCCCAACTCAAAATTGGGTAAACCAAATATTCTTGCGAAGCGAACAAAAAAATATGGAAAAAATCCTGAAATTGTCCATTATCGGTTTCGTACTCACAGTGCAGCGGAGAAAGTATTGAATTGATAAACTATGTTTTTTTCTCTGTTTCTGTTTTAGTCTACTTTCTTTGCTGCGTGACAGCGCTATGATCAATGAAAACGCCTTTCGGGTGGGACATGAAAGCGTCTATAAAACACTCATGTCAAAGAAAATCGTTAACNAGATAATAGAAAACAGAAAAGCGTAAAA ]
[+] EMBL BM609929 [ ccgAGATAATAGAAAACAGAAAAGCGTAAAACAGGAGGAACACAATACAATACGACGAACAAAAAGAAAAAAACAAATGCGAATATGATTTCAAAACGAAAACAATAACAAACAAACAGAGATGCGCGCGTACAAATGAAAACCAGAAACTATAAAATAAAACCAAGACAGTCGCACCTTTCTCCTTCACATCGTCCCATCCCGTCCCATTGCACCTCCACTCTAGGCTAGAAGATTTGCTCCGGATGCATTAGTAATCTCGAATTAGTGTCATGTTGATTATAATCCATTTCGCGTGATGAAAGCCCCGAATGTTACATAAAAGATACCATCAAGTGTACGGTGGGAGGCAGGAAATATTCACAACTCACAACTCACGAATAACAATCGGTTCAATGGTCAGTAAAAAAAAATCCCTTAACACTGCGTAAATCACAATGTAAGCCCCTTCCGACCCAACTAACCAGCAACACACACACACACACACACTTATATTAGCCGGCGACAGCGGTGTGTATGAATGATGCAAGATGATGTTTTCTGATTTCAATAAAGTATAACTGAAGCGATCAATAAATGT]
consensusID : consensus_9321#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1753 fasta sequence
[CCGGAAGGAGCAAATACAAAAGGAACAAAACAACAAATAACACAACAACAACAACAGTAGCAACCAAAATAATCCACACACCCACACACACATATACACACACTCACACAACAGCGTCATTTGCATGTGAAGCAATGTCAATGTAGTGAAGCAGAGCAAAATAGGCTGTAACATGATAGAAATGATTCGTAGTGTGATGATGACGATGATGATGATGATAGCGAGCAGCGAGAGATACCACAGTGCTTGACAGGAGTAAGGTGAAGGGTGAAACAGTGTCTAACAAAATCACATACACCATCTAGACAAATATTCAGTGTGCG---TGTGCACTAGAAGAAAATCAAGTAAATCGAGTACATTATTTGTTTTTGCATGCCACGAAAGGCA---TACAATAACAACCGATTGATCGATGGGGAAAGCTCCCGTGCTCGTGTTCAAGTTTT-TTTTCTGTAACCGTTCCACAGTGGCATATGTGTGTATGTATGTGTAACGATATTGAGATTGCATTTATTGAGCCAACAGTCCAAACGCTCCAATATTATGTTTGTTCAACAACTCACTTTTTTGCAGGTGTGATTAAAAAAGGGAAAATTAATCAGTGAAAGTGACAACATCCCACAAACAAATACTATAACCAATAACNAATACCATAGACACAGGTGGAAATCAACAATGGAAAATCGAAACAAAGAACCAGATAGAATGTTACCAAGCAATGAAAATTGATAAACGTACAGGAAACATAAACAAAAAACAAAACAAATGAAGAGAAATGAGAAAAAAAGTAACACAGCAACAGCAAAACCATACAAGTAAATTACACGAAATCCCGTTCGATAATGAAGATAAAAAAAACACACAGAAAGGAGGATCGAACAACAATAGAGTAAGAAAAGTAACAACGTACAACGCAAGAAGAAGATAAAATCTATAGCAAATGGTGGCATTATAAACAACGGTCATTATAACGACTACAACAAAATCGTAAACGGGAGTAAATCGAAAACAAAACAAACCAAACGCATTCTAAACACACAATTTATATAATTTCCACGTATAAAAATATCTAGCACAATAAGAGCATTTAGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTGCTCTTAATGTGTAATTTAAGACTCGGAATCATCAGAACACCGTTCTCTCGATCGTGTGCGTCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGATGTTTGATTGTTTCACTGTGCAAGTCGATTTTGTCACGAAAATATCAATAGTAACGTTGTACCCCGTTCACGTCATCCAAAATCCCGATCGACCCCGATTTTAATACGTTCGTACATACAGTGTTTGCTATGAATATTTGGTTGTTTGCCATATTTTTAGGTTTAGCTCCCGGTTTATTGATCGTTTCCTGCATATTTTTGAATCGTATACTATTTAATGGCACCCCCATTGAAAATCAATACAAATGACTCAAACAATAAAATCTGCGAAACGCTCCATAAATCTTGGGACGAACCCCATTCGTCCCATTCGGGAAATTGGGTAAACCAAATATTCTTGCGAAGCGAACAAAAAATTATGGGAAAATCCTGCAATTGTCCATTATCGGTTTCTTACTCACAGTGCAGCGGAGAATGTATTGAATTGATAAACTATGTTTTTTTTCTCTGTTTCTGTTTTGGTCTACTATCTTTGCTGCGTGACAGCGCTATGATTAATGAAAAC]
[+] EMBL BM619111 [CCGGAAGGAGCAAATACAAAAGGAACAAAACAACAAATAACACAACAACAACAACAGTAGCAACCAAAATAATCCACACACCCACACACACATATACACACACTCACACAACAGCGTCATTTGCATGTGAAGCAATGTCAATGTAGTGAAGCAGAGCAAAATAGGCTGTAACATGATAGAAATGATTCGTAGTGTGATGATGACGATGATGATGATGATAGCGAGCAGCGAGAGATACCACAGTGCTTGACAGGAGTAAGGTGAAGGGTGAAACAGTGTCTAACAAAATCACATACACCATCTAGACAAATATTCAGTGTGCG TGTGCACTAGAAGAAAATCAAGTAAATCGAGTACATTATTTGTTTTTGCATGCCACGAAAGGCA TACAATAACAACCGATTGATCGATGGGGAAAGCTCCCGTGCTCGTGTTCAAGTTTT TTTTCTGTAACCGTTCCACAGTGGCATGTATGTGTATGTATGTGTAACGATATTGAGATTGCATTTATTGAGCCAACAGTCCAAACGCTCCAATATTATGTTTGTTCAACAACTCACTTTTTTGCAGGTGTGATTAAAAAA ]
[+] EMBL BM647131 [ ccgGGCTGTAACATGATAGAAATGATTCGTAGTGTGATGATGACGATGATGATGATGATAGCGAGCAGCGAGAGATACCACAGTGCTTGACAGGAGTAAGGTGAAGGGCGAAACAGTGTCTAACAAAATCACATACACCATCTAGAGAAATATTCAGTGTGCGTGTTGTGCACTAGAAAAAAATCAAGTAAATCGAGTAAATTATTGATTTTTGCATGGCATGAAAGGTACGGTACAGTAACAGCCGATTGATCGATGGGGAAAGCTCCCGTGCTCGTGTTCAAGTTTTGTTTTCTGTAACCGTTCCACAGTGGC ATGTGTGTATGTAT ]
[+] EMBL BX621540 [ ATGTGTGTATGTATGTGTAACGATATTGAGATTGCATTTATTGAGCCAACAGTCCAAACGCTCCAATATTATGTTTGTTCAACAACTCACTTGTTTGCAGGTGTGATTAAAAAAGGGAAAATTAATCAGTGAAAGTGACAACATCCCACAAACAAATACTATAACCAATAACNAATACCATAGACACAGGTGGAAATCAACAATGGAAAATCGAAACAAAGAACCAGATAGAATGTTACCAAGCAATGAAAATTGATAAACGTACAGGAAACATAAACAAAAAACAAAACAAATGAAGAGAAATGAGAAAAAAAGTAACACAGCAACAGCAAAACCATACAAGTAAATTACACGAAATCCCGTTCGATAATGAAGATAAAAAAAACACACAGAAAGGAGGATCGAACAACAATAGAGTAAGAAAAGTAACAACGTACAACGCAAGAAGAAGATAAAATCTATAGCAAATGGTGGCATTATAAACAACGGTCATTATAACGACTACAACAAAATCGTAAACGGGAGTAAATCGAAAACAAAACAAACCAAACGCATTCTAAACACACAATTTATATAATTTCCACGTATAAAAATATCTAGCACAATAAGAGCATTTAGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTGCTCTTAATGTGTAATTTAAGACTCGGAATCATCAGAACACCGTTCTCTCGATCGTGTGCGTCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGNATGTCTGGTTTGATGTTTGATTGTTTCACTGTGCNAGTCGATTTTGTCACG AAATATCNATAGTAACG ]
[+] EMBL BM627624 [ ccgCACAATTTATATAATTTCCACGTATAAAAATATCTAGCACAATAAGAGCATTTAGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTGCTCTTAATGTGTAATTTAAGACTCGGAATCATCAGAACACCGTTCTCTCGATCGTGTGCGTCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGATGTTTGATTGTTTCACTGTGCAAGTCGATTTTGTCACGAAAATATCAATAGTAACGTTGTACCCCGTTCACGTCATCCAAAATCCCGATCGACCCCGATTTTAATACGTTCGTACATACAGTGTTTGCTATGAATATTTGGTTGTTTGCCATATTTTTAGGTTTAGCTCCCGGTTTATTGATCGTTTCCTGCATATTTTTGAATCGTATACTATTTAATGGCACCCCCATTGAAAATCAATACAAATGACTCAAACAATAAAATCTGCGAAACGCTCCATAAATCTTGGGACGAACCCCATTCGTCCCATTCGGGAAATTGGGTAAACCAAATATTCTTGCGAAGCGAACAAAAAATTATGGGAAAATCCTGCAATTGTCCATTATCGGTTTCTTACTCACAGTGCAGCGGAGAATGTATTGA ]
[+] EMBL BM603081 [ ccgACAATAAGAGCATTTAGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTGCTCTTAATGTGTAATTTAAGACTCGGAATCATCAGAACACCGTTCTCTCGATCGTGTGCGTCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGATGTTTGATTGTTTCACTGTGCAAGTCGATTTTGTCACGAAAATATCAATAGTAACGTTGTACCCCGTTCACGTCATCCAAAATCCCGATCGACCCCGATTTTAATACGTTCGTACATACAGTGTTTGCTATGAATATTTGGTTGTTTGCCATATTTTTAGGTTTAGCTCCCGGTTTATTGATCGTTTCCTGCATATTTTTGAATCGTATACTATTTAATGGCACCCCCATTGAAAATCAATACAAATGACTCAAACAATAAAATCTGCGAAACGCTCCATAAATCTTGGGACGAACCCCATTCGTCCCATTCGGGAAATTGGGTAAACCAAATATTCTTGCGAAGCGAACAAAAAATTATGGGAAAATCCTGCAATTGTCCATTATCGGTTTCTTACTCACAGTGCAGCGGAGAATGTATTGAATTGATAAACTATGTTTTTTTTCTCTGTTTCTGTTTTGGTCTACTATCTTTGCTGCGTGACAGCGCTATGATTAATGAAAAC]
[+] EMBL BM601371 [ ccgACAATAAGAGCATTTAGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTGCTCTTAATGTGTAATTTAAGACTCGGAATCATCAGAACACCGTTCTCTCGATCGTGTGCGTCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGATGTTTGATTGTTTCACTGTGCAAGTCGATTTTGTCACGAAAATATCAATAGTAACGTTGTACCCCGTTCACGTCATCCAAAATCCCGATCGACCCCGATTTTAATACGTTCGTACATACAGTGTTTGCTATGAATATTTGGTTGTTTGCCATATTTTTAGGTTTAGCTCCCGGTTTATTGATCGTTTCCTGCATATTTTTGAATCGTATACTATTTAATGGCACCCCCATTGAAAATCAATACAAATGACTCAAACAATAAAATCTGCGAAACGCTCCATAAATCTTGGG ]
consensusID : consensus_9321#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 935 fasta sequence
[AGAAATGAGAACAAAAGCAAAACCATACAAGTAAATTAAACGTAATACCGTTCGATAATGAAAATTTAAAAACACACACACAGAAAAGAGGGTCGAACAACAATAGAGTAAGAAAAGTAACAACGTGGCACGGAAGAAGAAGATAAAATCTATAGCAAATGGTGGCATTATAAACAACGGTCATTACAACGATTACAACAAAATCGT-AACGGGAGTAAATCGAAAACAAAACAAACCAAACGCATTCTAAACACACAATTTATATAATTTCCACGTATAAAAATATGGTAATCTAGCACAATAAGAGCATTTGGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTGTTCTTAATGTGTAATTTAAGACTCGGAATCATCAAAACACCGTTCTCTCGATCGTGTGCGTCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGATGTTTGATTGTTTCACTGTGCCAGTCGATTTTGTCACGAAAATATGAATAGTAACGTTGTACCCCGTTCACGTCATCCAAAACCCCGATCGACCCCGATTTTAATACGCTCGTACATACAGTGTTTGCTATAGATATTTGGTTGTTGGCTATATTTTTTAGGTTTAGCTCCCGCAAAATCAATACAAATGATTCAAACAATAAAATCTGCGAAACGCTCCATAAATCTTGGGACGAACCCCAACTCAAAATTGGGTAAACCAAATATTCTTGCGAAGCGAACAAAAAAATATGGAAAAAATCCTGAAATTGTCCATTATCGGTTTCGTACTCACAGTGCAGCGGAGAAAGTATTGAATTGATAAACTATGTTTTTTTCTCTGTTTCTGGTTTAGTCTACTTTCTTTGCTGCGTGACAGCGCTATGATCAATGGAAACGCCTTTCGGGTGGGACATGAAAGC]
[+] EMBL BX609914 [AGAAATGAGAACAAAAGCAAAACCATACAAGTAAATTAAACGTAATACCGTTCGATAATGAAAATTTAAAAACACACACACAGAAAAGAGGGTCGAACAACAATAGAGTAAGAAAAGTAACAACGTGGCACGGAAGAAGAAGATAAAATCTATAGCAAATGGTGGCATTATAAACAACGGTCATTACAACGATTACAACAAAATCGTAAACGGGAGTAAATCGAAAACAAAACAAACCAAACGCATTCTAAACACACAATTTATATAATTTCCACGTATAAAAATATTGTAATTTAGCACAATAAGAGCATTTAGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTGCTCTTAATGTGTAATTTAAGACTCGGAATCATCAGAACACCGTTCTCTCGATCGTGTGCGTCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGATGTTTGATTGTTTCGCTGTGCAAGTCGATTTTGTCACGAAAATATCAATAGTAACGTTGTACCCCGTTCACGTCATCCAAAATCC ]
[+] EMBL BX621351 [ AAGAAGAAGATAAAATCTATAGCAAATGGTGGCATTATAAACAACGGTCATTATAACGACTACAACAAAATCGT AACGGGAGTAAATCGAAAACAAAACAAACCAAACGCATTCTAAACACACAATTTATATAATTTCCACGTATAAAAATATGGTAATCTAGCACAATAAGAGCATTTGGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTGTTCTTAATGTGTAATTTAAGACTCGGAATCATCAAAACACCGTTCTCTCGATCGTGTGCGTCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGATGTTTGATTGTTTCACTGTGCCAGTCGATTTTGTCACGAAAATATGAATAGTAACGTTGTACCCCGTTCACGTCATCCAAAACCCCGATCGACCCCGATTTTAATACGCTCGTACATACAGTGTTTGCTATAGATATTTGGTTGTTGGCTATATTTTTTAGGTTTAGCTCCCGCAAAATCAATACAAATGATTCAAACAATAAAATCTGCGAAACGCTCCATAAATCTTGGGACGAACCCCAACTCAAAATTGGGTAAACCAAATATTCTTGCGAAGCGAACAAAAAAATATGGAAAAAATCCTGAAATTGTCCATTATCGGTTTCGTACTCACAGTGCAGCGGAGAAAGTATTGAATTGATAAACTATGTTTTTTTCTCTGTTTCTGGTTTAGTCTACTTTCTTTGCTGCGTGACAGCGCTATGATCAATGGAAACGCCTTTCGGGTGGGACATGAAAGC]
[+] EMBL BM590132 [ ccgAAACAAACCAAACGCATTCTAAACACACAATTTATATAATTTCCACGTATAAAAATATGGTAATCTAGCACAATAAGAGCATTTGGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTGTTCTTAATGTGTAATTTAAGACTCGGAATCATCAAAACACCGTTCTCTCGATCGTGTGCGTCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGATGTTTGATTGTTTCACTGTGCCAGTCGATTTTGTCACGAAAATATGAATAGTAACGTTGTACCCCGTTCACGTCATCCAAAACCCCGATCGACCCCGATTTTAATACGCTCGTACATACAGTGTTTGCTATAGATATTTGGTTGTTGGCTATATTTTTTAGGTTTAGCTCCCGCAAAATCAATACAAATGATTCAAACAATAAAATCTGCGAAACGCTCCATAAATCTTGGGACGAACCCCAACTCAAAATTGGGTAAACCAAATATTCTTGCGAAGCGAACAAAAAAATATGGAAAAAATCCTGAAATTGTCCATTATCGGTTTCGTACTCACAGTGCAGCGGAGAAAGTATTGAATTGATAAACTATGTTTTTTTCTCTGGTTCTGTTTTAGTCTACTTTCTTTGCTGCGTGACAGCGCTATGATC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9321#1 CCGGAAGGAGCAAATACAAAAGGAACAAAACAACAAATAACACAACAACAACAACAGTAG 60
consensus_9321#2 ------------------------------------------------------------
consensus_9321#0 ------------------------------------------------------------
consensus_9321#1 CAACCAAAATAATCCACACACCCACACACACATATACACACACTCACACAACAGCGTCAT 120
consensus_9321#2 ------------------------------------------------------------
consensus_9321#0 ------------------------------------------------------------
consensus_9321#1 TTGCATGTGAAGCAATGTCAATGTAGTGAAGCAGAGCAAAATAGGCTGTAACATGATAGA 180
consensus_9321#2 ------------------------------------------------------------
consensus_9321#0 ------------------------------------------------------------
consensus_9321#1 AATGATTCGTAGTGTGATGATGACGATGATGATGATGATAGCGAGCAGCGAGAGATACCA 240
consensus_9321#2 ------------------------------------------------------------
consensus_9321#0 ------------------------------------------------------------
consensus_9321#1 CAGTGCTTGACAGGAGTAAGGTGAAGGGTGAAACAGTGTCTAACAAAATCACATACACCA 300
consensus_9321#2 ------------------------------------------------------------
consensus_9321#0 ---------------------------------------CCGAAGAAAACAAAC-CTCGA 20
consensus_9321#1 TCTAGACAAATATTCAGTGTGCGTGTGCACTAGAAGAAAATCAAGTAAATCGAGTACATT 360
consensus_9321#2 ------------------------------------------------------------
consensus_9321#0 TTTTGACAA-TGTT--GTATA-ATATACGATAAACGAAA--CAA--AAACCAAAAACGTT 72
consensus_9321#1 ATTTGTTTTTGCATGCCACGAAAGGCATACAATAACAACCGATTGATCGATGGGGAAAGC 420
consensus_9321#2 ------------------------------------------------------------
consensus_9321#0 -TTTCCTCTTCCACCATTCTCGAGA-GTACATTTAGTGCGCTTCGTAAGATTCCTAGCTC 130
consensus_9321#1 TCCCGTGCTCGTGTTCAAGTTTTTTTTCTGTAACCGTTCCACAGTGGCATATGTGTGTAT 480
consensus_9321#2 ------------------------------------------------------------
consensus_9321#0 TATGATAACAAAAACTATACATATATAAAGCAAATCTCTCCTTGCAGTGAAGTTAGAAAT 190
consensus_9321#1 GTATGTGTAACGATATTGAGATTGCATTTATTGAGCCAACAGTCCAAACGCTCCAATATT 540
consensus_9321#2 ------------------------------------------------------------
consensus_9321#0 GT-CGTGTAACGCAACTT--CCTGTCTTGCTTGAT------GCCCAATGATTCCTTTCTA 241
consensus_9321#1 ATGTTTGTTCAACAACTCACTTTTTTGCAGGTGTGATTAAAAAAGGGAAAATTAATCA-G 599
consensus_9321#2 ------------------------------------------------------------
consensus_9321#0 AACCGTAACAAACAAACTGAAAATAAAT-GTTGAAAGAAGAAGAAAGAGTATGAACCACA 300
consensus_9321#1 TGAAAGTGACAACATCCCA-CAAACAAATACTATAACCAATAACNAATACC-ATAGACAC 657
consensus_9321#2 ------------------------------------------------------------
consensus_9321#0 TAGAACGAACAGCAGACCAGTGTAGACATTGTGTATCGTAAAACACTCACAGACAGACAC 360
consensus_9321#1 AGGTGGAAATCAACAATGGAAAATCGAAACAAAGAACCAGATAGAATGTTACCAAGCAAT 717
consensus_9321#2 ------------------------------------------------------------
consensus_9321#0 AGGAAAACATGAATCACGTCGAAGGAGCACACAGTGAAGGGTAGCA-GCTACAGTAGTAA 419
consensus_9321#1 GAAAATTGATAAACGTACAGGAAACATAAACAAAAAACAAAACAAATGAAGAGAAATGAG 777
consensus_9321#2 ------------------------------------------------------------
consensus_9321#0 CAGCAGTAGTAGAAGTAGAACAAACAAAACGGAGCAGCGTAACAAAGAGAAACAACGTAC 479
consensus_9321#1 AAAAAAAGTAACACAGCAACAGCAAAACCATACAAGTAAATTACACGAAATCCCGTTCGA 837
consensus_9321#2 ---AGAAATGAGA--ACAAAAGCAAAACCATACAAGTAAATTAAACGTAATACCGTTCGA 55
consensus_9321#0 CCAGAAACAAACAAAACAAAAA-AGAATCAGAAAAGTGTATATTTTTATACTCCTTAT-- 536
** * * *** * * ** ** * **** ** * ** *
consensus_9321#1 TAATGAAGATAAAAAAA---ACACACAGAAAGGAGGATCGAACAACAATAGAGTAAGAAA 894
consensus_9321#2 TAATGAAAATTTAAAAACACACACACAGAAAAGAGGGTCGAACAACAATAGAGTAAGAAA 115
consensus_9321#0 --ACGAAGACGTGATTA--------TTGAAAGAGTAGACAAACA------GACGAACGAA 580
* *** * * * **** * **** ** ** **
consensus_9321#1 AGTAACAACGTACAACGCAAGAAGAAGATAAAATCTATAGCAAATGGTGGCATTATAAAC 954
consensus_9321#2 AGTAACAACGTGGCACGGAAGAAGAAGATAAAATCTATAGCAAATGGTGGCATTATAAAC 175
consensus_9321#0 AGAAAC--CATGAAAGGCAAAGAATAGAGAAGG-----AGCAAATACAAAGAAACAAAAC 633
** *** * * * * ** * *** ** ******* * ****
consensus_9321#1 AACGGTCATTATAACGACTACAACAAAATCGTAAACGGGAGTAAATCGAAAACAAAACAA 1014
consensus_9321#2 AACGGTCATTACAACGATTACAACAAAATCGTAA-CGGGAGTAAATCGAAAACAAAACAA 234
consensus_9321#0 AACAAATAACACAACAACAACAGTA-----GCAA-CCAAAATATCACACACCCCACACAC 687
*** * * *** * *** * * ** * * ** * * * * ***
consensus_9321#1 ACCAAACGCATTCTAAACACACAATTTATATAATTTCCACGTATAAAAATA------TCT 1068
consensus_9321#2 ACCAAACGCATTCTAAACACACAATTTATATAATTTCCACGTATAAAAATATGGTAATCT 294
consensus_9321#0 ACACTATCNNNCTCTAACACACAATT-ATATAATTTC-ACGTATAAATATG---TAATCT 742
** * *********** ********** ********* ** ***
consensus_9321#1 AGCACAATAAGAGCATTTAGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTG 1128
consensus_9321#2 AGCACAATAAGAGCATTTGGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTG 354
consensus_9321#0 AGCACAATAAGAGCATTTGGGGCGAGCGAAAAGACCAGATTGTAGAGACAGGTGCAGGTG 802
****************** *****************************************
consensus_9321#1 CTCTTAATGTGTAATTTAAGACTCGGAATCATCAGAACACCGTTCTCTCGATCGTGTGCG 1188
consensus_9321#2 TTCTTAATGTGTAATTTAAGACTCGGAATCATCAAAACACCGTTCTCTCGATCGTGTGCG 414
consensus_9321#0 TTCTTAATGTGTAATTTAAGACTCGGAATCATCAAAACACCGTTCTCTCGATCGTGTGCG 862
********************************* *************************
consensus_9321#1 TCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGA 1248
consensus_9321#2 TCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGA 474
consensus_9321#0 TCCAGTCCATGCATGAAAGCGCGTAAACTCGTTTGTGTGAGCAATGTATGTCTGTTTTGA 922
************************************************************
consensus_9321#1 TGTTTGATTGTTTCACTGTGCAAGTCGATTTTGTCACGAAAATATCAATAGTAACGTTGT 1308
consensus_9321#2 TGTTTGATTGTTTCACTGTGCCAGTCGATTTTGTCACGAAAATATGAATAGTAACGTTGT 534
consensus_9321#0 TGTTTGATTGTTTCACTGTGCCAGTCGATTTTGTCACGAAAATATGAATAGTAACGTTGT 982
********************* *********************** **************
consensus_9321#1 ACCCCGTTCACGTCATCCAAAATCCCGATCGACCCCGATTTTAATACGTTCGTACATACA 1368
consensus_9321#2 ACCCCGTTCACGTCATCCAAAACCCCGATCGACCCCGATTTTAATACGCTCGTACATACA 594
consensus_9321#0 ACCCCGTTCACGTCATCCAAAACCCCGATCGACCCCGATTTTAATACGCTCGTACATACA 1042
********************** ************************* ***********
consensus_9321#1 GTGTTTGCTATGAATATTTGGTTGTTTGCCATATTTTT-AGGTTTAGCTCCCGGTTTATT 1427
consensus_9321#2 GTGTTTGCTATAGATATTTGGTTGTTGGCTATATTTTTTAGGTTTAGCTCCCGC------ 648
consensus_9321#0 GTGTTTGCTATAGATATTTGGTTGTTGGCTATATTTTTTAGGTTTAGCTCCCGC------ 1096
*********** ************* ** ******** **************
consensus_9321#1 GATCGTTTCCTGCATATTTTTGAATCGTATACTATTTAATGGCACCCCCATTGAAAATCA 1487
consensus_9321#2 -----------------------------------------------------AAAATCA 655
consensus_9321#0 -----------------------------------------------------AAAATCA 1103
*******
consensus_9321#1 ATACAAATGACTCAAACAATAAAATCTGCGAAACGCTCCATAAATCTTGGGACGAACCCC 1547
consensus_9321#2 ATACAAATGATTCAAACAATAAAATCTGCGAAACGCTCCATAAATCTTGGGACGAACCCC 715
consensus_9321#0 ATACAAATGATTCAAACAATAAAATCTGCGAAACGCTCCATAAATCTTGGGACGAACCCC 1163
********** *************************************************
consensus_9321#1 ATTCGTCCCATTCGGGAAATTGGGTAAACCAAATATTCTTGCGAAGCGAACAAAAAATTA 1607
consensus_9321#2 A--------ACTCA--AAATTGGGTAAACCAAATATTCTTGCGAAGCGAACAAAAAAATA 765
consensus_9321#0 A--------ACTCA--AAATTGGGTAAACCAAATATTCTTGCGAAGCGAACAAAAAAATA 1213
* * ** ***************************************** **
consensus_9321#1 TGGGAAAA-TCCTGCAATTGTCCATTATCGGTTTCTTACTCACAGTGCAGCGGAGAATGT 1666
consensus_9321#2 TGGAAAAAATCCTGAAATTGTCCATTATCGGTTTCGTACTCACAGTGCAGCGGAGAAAGT 825
consensus_9321#0 TGGAAAAAATCCTGAAATTGTCCATTATCGGTTTCGTACTCACAGTGCAGCGGAGAAAGT 1273
*** **** ***** ******************** ********************* **
consensus_9321#1 ATTGAATTGATAAACTATGTTTTTTTTCTCTGTTTCTGTTTTGGTCTACTATCTTTGCTG 1726
consensus_9321#2 ATTGAATTGATAAACTATGTTTTTTT-CTCTGTTTCTGGTTTAGTCTACTTTCTTTGCTG 884
consensus_9321#0 ATTGAATTGATAAACTATGTTTTTTT-CTCTGTTTCTGTTTTAGTCTACTTTCTTTGCTG 1332
************************** *********** *** ******* *********
consensus_9321#1 CGTGACAGCGCTATGATTAATGAAAAC--------------------------------- 1753
consensus_9321#2 CGTGACAGCGCTATGATCAATGGAAACGCCTTTCGGGTGGGACATGAAAGC--------- 935
consensus_9321#0 CGTGACAGCGCTATGATCAATGAAAACGCCTTTCGGGTGGGACATGAAAGCGTCTATAAA 1392
***************** **** ****
consensus_9321#1 ------------------------------------------------------------
consensus_9321#2 ------------------------------------------------------------
consensus_9321#0 ACACTCATGTCAAAGAAAATCGTTAACNAGATAATAGAAAACAGAAAAGCGTAAAACAGG 1452
consensus_9321#1 ------------------------------------------------------------
consensus_9321#2 ------------------------------------------------------------
consensus_9321#0 AGGAACACAATACAATACGACGAACAAAAAAAAAAAAACAAATGCGAATATGATTTCAAA 1512
consensus_9321#1 ------------------------------------------------------------
consensus_9321#2 ------------------------------------------------------------
consensus_9321#0 ACGAAAACAATAACAAACAAACAGAGATGCGCGCGTACAAATGAAAACCAGAAACTATAA 1572
consensus_9321#1 ------------------------------------------------------------
consensus_9321#2 ------------------------------------------------------------
consensus_9321#0 AATAAAACCAAGACAGTCGCACCTTTCTCCTTCACATCGTCCCATCCCGTCCCATTGCAC 1632
consensus_9321#1 ------------------------------------------------------------
consensus_9321#2 ------------------------------------------------------------
consensus_9321#0 CTCCACTCTAGGCTAGAAGATTTGCTCCGGATGCATTAGTAATCTCGAATTAGTGTCATG 1692
consensus_9321#1 ------------------------------------------------------------
consensus_9321#2 ------------------------------------------------------------
consensus_9321#0 TTGATTATAATCCATTTCGCGTGATGAAAGCCCCGAATGTTACATAAAAGATACCATCAA 1752
consensus_9321#1 ------------------------------------------------------------
consensus_9321#2 ------------------------------------------------------------
consensus_9321#0 GTGTACGGTGGGAGGCAGGAAATATTCACAACTCACAACTCACGAATAACAATCGGTTCA 1812
consensus_9321#1 ------------------------------------------------------------
consensus_9321#2 ------------------------------------------------------------
consensus_9321#0 ATGGTCAGTAAAAAAAAATCCCTTAACACTGCGTAAATCACAATGTAAGCCCCTTCCGAC 1872
consensus_9321#1 ------------------------------------------------------------
consensus_9321#2 ------------------------------------------------------------
consensus_9321#0 CCAACTAACCAGCAACACACACACACACACACACTTATATTAGCCGGCGACAGCGGTGTG 1932
consensus_9321#1 ------------------------------------------------------------
consensus_9321#2 ------------------------------------------------------------
consensus_9321#0 TATGAATGATGCAAGATGATGTTTTCTGATTTCAATAAAGTATAACTGAAGCGATCAATA 1992
consensus_9321#1 -----
consensus_9321#2 -----
consensus_9321#0 AATGT 1997
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||