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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9324#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1124 fasta sequence
[CCGCCCACGCGTCCGGTTACTGACAAACGTCAAACGCTGTTTACGGTTCGTTTTT-CCCCTCGTAGCCCATTTACGTTGTTTTTGTGCCTTTTGCGGGTTTCGGGTGTACGCGCTTTTCCACCCTGCACACAGAATCTCATCCCAGTTTTCCAATCCTCCCGATATTTCCCCACACTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAGTGTTACGTCTGCTCGAACCAGACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGATCTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTTTTCGCTCGGCGCCCAGAAGCAGTTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCACACTGGT-GGCCCTCGGTGTGTTACTGCGAAGCGTTATGGCTAGCTG-AAAATTGGACGTAGAGCAGT-GGGAAGCACC-GGTGGGAAAACAAATCCAGCGAACATCGGCTGCTAGCACC-TTCAATCCATCTCTTCGTACATTCCATCCGCAAGTAAGCAATCGTCAGTATTCAGTTGCACTTTTCTAT-CGAATCTATTGCGCGTAAGAGTAAGTAAGAAGCTCGTCCTTTTCCC-TCCCCAAACGATAGACAGACGCAAACAATCGTGCCTCTAGCGATAGGTAAAAGTAGTTATAGTGATTGCAGCCGTACGTGAACCCCTACGCACGGGGCAACTAAAGTTAATCGCCTTAAATGGTGTATGAAACGTATCCGTCCAATTATTTTTCTATGTATACAAATTCTTCTTGACCGCTCTCAGAA--CCAGAT----AAGGTCATCG-CTGTT-----G--AAATATACCACACGTGTAACAGTAAAAAAA---AAAAAAAAATCAGACGCTNACCTCGGGGG]
[+] EMBL BM639378 [CCGCCCACGCGTCCGGTTACTGACAAACGTCAAACGCTGTTTACGGTTCGTTTTTCCCCCTCGTAGCCCATTTACGTTGTTTTTGTGCCTTTTGCGGGTTTCGGGTGTACGCGCTTTTCCACCCTGCACACAGAATCTCATCCCAGTTTTCCAATCCTCCCGATATTTCCCCACATTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAGTGTTACGTCTGCTCGAACCAGACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGATCTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTTTTCGCTTGGCGCCCAGAAGCAGTTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCACACTGGT GGGCCTCGGTGTGTTACTGCGAAGCGTTATGGCTAGCTGAAAAATTGGACGTAGAGCAGTGGGGAAGCACC GGTGGGAAAACAAATCCAGCGAACATCGGCTGCT ]
[+] EMBL CNS096WH [ ggGTTTACGCTTCGTTTTT CCCCTCGTAGCCCATTTACGTTGTTTTTGTGCCTTTTGCGGGTTTCGGGTGTACGCGCTTTTCCACCCTGCACACAGAATCTCATCCCAGTTTTCCAATCCTCCCGATATTTCCCCACACTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAGTGTTACGTCTGCTCGAACCAGACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGATCTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTTTTCGCTCGGCGCCCAGAAGCAGTTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGCGGCCTGGACCTGTTCCGCCTGCTGCCTCGGCGACCGC ]
[+] EMBL CNS09EWC [ CCCCTCGTAGCCCATTTACGTTGTTTTTGTGCCTTTTGCGGGTTTCGGGTGTACGCGCTTTTCCACCCTGCACACAGAATCTCATCCCAGTTTTCCAATCCTCCCGATATTTCCCCACACTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAGTGTTACGTCTGCTCGAACCAGACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGATCTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTTTTCGCTCGGCGCCCAGAAGCAGTTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCACACTGGT GGCCCTCGGTGTGTTACTGCGAA CGTTATGGCTAGCTG AAAATTGGACGTAGAGCAGT GGGAAGCACC GGTGGGAAAACAAATCCAGCGAACATCGGCTGCTAGCACC TTCAATCCATCTCTTCGTACATTCCATCCGCAAGTAAGCAATCGTCAGTATTCAGTTGCACTTTTTTAT CGAAACTATTGCGCGTAAGAGTAAGTAAGAAGCTCGTCCTTTTCCC TCCCCAAACGATAGACAGACGCAAACAATCGTGCCTCTAGCGATAGGTAAAAGTAGTTATAGTGATTGCAGCCGTACGTGAACCCCTACGCACGGGGCAACTAAAGTTAATCGCCTTAAATGGTGTATGAAACGTATCCGTCCAATTATTTTTCTATGTATACAAATTCTTCTTGACCGCT ]
[+] EMBL BX603292 [ AGCCCATTTACGTTGTTTTTGTGCCTTTTGCGGGTTTCGGGTGTACGCGCTTTTCCACCCTGCACACAGAATCTCATCCCAGTTTTCCAATCCTCCCGATATTTCCCCACACTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAGTGTTACGTCTGCTCGAACCAGACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGATCTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTTTTCGCTCGGCGCCCAGAAGCAGTTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTTGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCACACTGGT GGCCCTCGGTGTGTTACTGCGAAGCGTTATGGCTAGCTG AAAATTGGACGTAGAGCAGT GGGAAGCACC GGTGGGAAAACAAATCCAGCGAACATCGGCTGCTAGCACC TTCAATCCATCTCTTCGTACATTCCATCCGCAAGT ]
[+] EMBL BM609540 [ ccgCGGGTGTACGCGCTTTTCCACCCTGCACACAGAATCTCATCCCAGTTTTCCAATCCTCCCGATATTTCCCCACATTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAGTGTTACGTCTGCTCGAACCAGACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGATCTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTTTTCGCTTGGCGCCCAGAAGCAGTTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCACACTGGTGGGCCCTCGGTGTGTTACTGCGAAGCGTTATGGCTAGCTG AAAATTGGACGTAGAGCAGT GGGAAGCACCGGGTGGGAAAACAAATCCAGCGAACATCGGCTGCTAGCACC TTCAATCCATCTCTTCGTACATT ]
[+] EMBL BX621586 [ GTACGCGCTTTTCCACCCTGCACACAGAATCTCATCCCAGTTTTCCAATCCTCCCGATATTTCCCCACACTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAGTGTTACGTCTGCTCGAACCAGACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGATCTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTTTTCGCTCGGCGCCCAGAAGCAGTTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCTGCCAGCGCATCCGCAACAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTTGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCACACTGGT GGCCCTCGGTGTGTTACTGCGAAGCGTTATGGCTAGCTG AAAATTGGACGTAGAGCAGT GGGAAGCACC GGTGGGAAAACAAATCCAGCGAACATCGGCTGCTAGCACC TTCAATCCATCTCTTCGTACATTCCATCCGCAAGTAAGCAATCGTCAGTATTCAGTTGCACTTTTCTAT CGAATCTATTGCGCGTAAGAGTAAGTAAGAAGCTCGTCCTTTTNCC TCCCCAAACGATAGACAGACGCNAACAATCGTGCCTCTAGCGATAGGTAAAAGTAGTTATAGTGATTGCAGCCGTACGTGAACCCCT ]
[+] EMBL BX628085 [ CCACACTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAGTGTTACGTCTGCTCGAACCAGACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGATCTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTTTTCGCTCGGCGCCCAGAAGCAGTTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTTGGCGACCGCTGCGACTACTACGTGATCAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCACACTGGT GGCCCTCGGTGTGTTACTGCGAAGCGTTATG ]
[+] EMBL BX609822 [ ATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCTTGGACTACTCGAAGCTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAGTGTTACGTCTGCTCGAACCAGACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGATCTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTTTTCGCTCGGCGCCCAGAAGCAGTTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTTGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCACACTGGT GGCCCTC ]
[-] EMBL AL692192 [ TGCTAGCACCGTTCAATCCATCTCTTCGTACATTCCATCCGCAAGTAAGCAATCGTCAGTATTCAGTTGCACTTTTCTATGCGAATCTATTGCGCGTAAGAGTAAGTAAGAAGCTCGTCCTTTTCCCGTCCCC AACGATAGACAGACGCAAACAATCGTGCCTCTAGCGATAGGTAAAAGTAGTTATAGTGATTGCAGCCGTACGTGAACCCCTACGCACGGGGCAACTAAAGTTAATCGCCTTAAATGGTGTATGAAACGTATCCGTCCAATTATTTTTCTATGTATACAAATTCTTCTTGACCGCTCTCAGAACCCCAGATTAAAAAGGTCATCGCCTGTTTTTGGGAAAAATATACCACACGTGTAACAGTAAAAAAAGGGAAAAAAAAATCAGACGCTNACCTCGGGGG]
consensusID : consensus_9324#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 894 fasta sequence
[CTGTTGGCCTACTGGACGGTTCGTTTTTCCCCCTCGTAGCCCATTTACGTTGTTTTTGTGCCTTTTGCGGGTTTCGGGTGTACGCGCTTTTCCACCCTGAACACAGAATCTCATCCCAGTTTTCCAATCCTCCCGATATTTCCCCAAACTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCAAGAAGGAGTTCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATAAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCAAACTGGTGGCCCTCGGTGTGTTACTGCGAAGCGTTATGGCTAGCTGAAAATTGGGCGTAGAGCAGTGGGAAGCACCGGTGGGAAAACAAATCCAGCGAACATCGGCTGCTAGCACCTTCAATCCATCTCTTCGTACATTCCATCCGCAAGTAAGCAATCGTCAGTATTCAGTTGCACTTTTTTATCGAAACTATTGCGCGTAAGAGTAAGTAAGAAGCTCGTCCTTTTCCCTCCCCAAACGATAGACAGACGCAAACAATCGTGCCTCTAGCGATAGGTAAAAGTAGTTATAGTGATTGCAGCCGTACGTGAACCCCTACGCACGGGGCAACTAAAGTTAATCGCCTTAAATGGTGTATGAAACGTATCCGTCCAATTATTTTTCTATGTATACAAATTCTTCTTGACCGCTCTCAGAACCAGATAAGGTCATCGCTGTTGAAATATACCAACACGTGTAACATTGTAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGAGCTGCGGGT]
[-] EMBL CNS09PYN [CTGTTGGCCTACTGGACGGTTCGTTTTTCCCCCTCGTAGCCCATTTACGTTGTTTTTGTGCCTTTTGCGGGTTTCGGGTGTACGCGCTTTTCCACCCTGAACACAGAATCTCATCCCAGTTTTCCAATCCTCCCGATATTTCCCCAAACTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCAAGAAGGAGTTCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGAACTGGACCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATAAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCAAACTGGTGGCCCTCGGTGTGTTACTGCGAAGCGTTATGGCTAGCTGAAAATTGGGCGTAGAGCAGTGGGAAGCACCGGTGGGAAAACAAATCCAGCGAACATCGGCTGCTAGCACCTTCAATCCATCTCTTCGTACATTCCATCCGCAAGTAAGCAATCGTCAGTATTCAGTTGCACTTTTTTATCGAAACTATTGCGCGTAAGAGTAAGTAAGAAGCTCGTCCTTTTCCCTCCCCAAACGATAGACAGACGCAAACAATCGTGCCTCTAGCGATAGGTAAAAGTAGTTATAGTGATTGCAGCCGTACGTGAACCCCTACGCACGGGGCAACTAAAGTTAATCGCCTTAAATGGTGTATGAAACGTATCCGTCCAATTATTTTTCTATGTATACAAATTCTTCTTGACCGCTCTCAGAACCAGATAAGGTCATCGCTGTTGAAATATACCAACACGTGTAAC ]
[+] EMBL CNS09PYM [ GTTTTTCCCCCTCGTAGCCCATTTACGTTGTTTTTGTGCCTTTTGCGGGTTTCGGGTGTACGCGCTTTTCCACCCTGCACACAGAATCTCATCCCAGTTTTCCAATCCTCCCGATATTTCCCCACACTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCAAGAAGGAGATCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCACACTGGTGGCCCTCGGTGTGTTACTGCGAA CGTTATGGCTAGCTGAAAATTGGGCGTAGAGCAGTGGGAAGCACCGGTGGGAAAACAAATCCAGCGAACATCGGCTGCTAGCACCTTCAATCCATCTCTTCGTACATTCCATCCGCAAGTAAGCAATCGTCAGTATTCAGTTGCACTTTTTTATCGAAACTATTGCGCGTAAGAGTAAGTAAGAAGCTCGTCCTTTTCCCTCCCCAAACGATAGACAGACGCAAACAATCGTGCCTCTAGCGATAGGTAAAAGTAGTTATAGTGATTGCAGCCGTACGTGAACCCCTACGCACGGGGCAACTAAAGTTAATCGCCTTAAATGGTGTATGAAACGTATCCGTCCAATTATTTTTCTATGTATACAAATTCTTCTTGACCGCTCTCAGAACCAGATAAGGTCATCGCTGTTGAAATATACCAACACGTGTAACATTGTAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGAGCTGCGGGT]
[-] EMBL CNS09EWD [ ggcGCCAAGAAGGAGTTCTGCCAGCGCATCCGCACCAAGAACATGCCGTACTGTACGCACTTTTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATAAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCAAACTGGTGGCCCTCGGTGTGTTACTGCGAAGCGTTATGGCTAGCTGAAAATTGGACGTAGAGCAGTGGGAAGCACCGGTGGGAAAACAAATCCAGCGAACATCGGCTGCTAGCACCTTCAATCCATCTCTTCGTACATTCCATCCGCAAGTAAGCAATCGTCAGTATTCAGTTGCACTTTTTTATCGAAACTTTTGCGCGTAAGAGTAAGTAAGAAGCTCGTCCTTTTCCCTCCCCAAACGATAGACAGACGCAAAAAATCGTGCCTCTAGCGATAGGTAAAAGTAGTTATAGTGATTGCAGCCGTACGTGAACCCCTACGCACGGGGCAACTAAAGTTAATCGCCTTAAATGGTGTATGAAACGTATCCGTCCAATTTTTTTTCTATGTATACAAATTCTTCTTGCCCGCTCTCAGAACCAGATAAGGTCATCGCTGTTGAAATATACCAA ]
[-] EMBL CNS096WI [ TTATAGTGATTGCAGCCGTACGTGAACCCCTACGCACGGGGCAACTAAAGTTAATCGCCTTAAATGGTGTATGAAACGTATCCGTCCAATTATTTTTCTATGTATACAAATTCTTCTTGACCGCTCTCAGAACCAGATAAGGTCATCGCTGTTGAAATATACCAACACGTGTAACA GTAAAAAAAAAAAAA ]
consensusID : consensus_9324#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 770 fasta sequence
[GAATCCCCCGAGGTTATTTTGCGGGTTTCGGGTGTACGCGCTTTTCCACCCTGCACACAGAATCTCATCCCAGTTTTCCAAATCCTCCCGATATTTCCCCACACTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAGTGTTACGTCTGCTCGAACCAGACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGATCTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTTTTCGCTCGGCGCCCAGAAGCAGATTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCACACTGGTGGCCCTCGGTGTGTTACTGCGAAGCGTTATGGCTAGCTGAAAATTGGACGTAGAGCAGTGGGAAGCACCGGTGGGAAAACAAATCCAGCGAACATCGGCTGCTAGCACCTTCAATCCATCTCTTCGTACATTCCATCCGCAAGTAAGCAATCGTCAGTATTCAGTTGCACTTTTTATCGAAACTATTGCGCGTAAGAGTAAGTAGAAGC]
[+] EMBL AL932156 [GAATCCCCCGAGGTTATTTTGCGGGTTTCGGGTGTACGCGCTTTTCCACCCTGCACACAGAATCTCATCCCAGTTTTCCAAATCCTCCCGATATTTCCCCACACTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAGTGTTACGTCTGCTCGAACCAGACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGATCTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTTTTCGCTCGGCGCCCAGAAGCAGATTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCACACTGGTGGCCCTCGGTGTGTTACTGCGAAGCGTTATGGCTAGCTGAAAATTGGACGTAGAGCAGTGGGAAGCACCGGTGGGAAAACAAATCCAGCGAACATCGGCTGCTAGCACCTTCAATCCATCTCTTCGTACATTCCATCCGCAAGTAAGCAATCGTCAGTATTCAGTTGCACTTTTTATCGAAACTATTGCGCGTAAGAGTAAGTAGAAGC]
[+] EMBL BM577443 [ TCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCAAACCTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAGTGTTACGTCTGCTCGAACCAGACCG ]
consensusID : consensus_9324#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 674 fasta sequence
[CCGCCCACGCGTCCGCTTTTGCGGGTTTCGGGTGTACGCGCTTTTCCACCCTGCACACAGAATCTCATCCCAGTTTTCCAATCCTCCCGATATTTCCCCACATTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAGTGTTACGTCTGCTCGAACCAGACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGATCTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTTTTCGCTTGGCGCCCAGAAGCAGTTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCACACTGGTGGCCCTCGGTGTGTTACTGCGAAGCGTTATGGCTAGCTGAAAATTGGACGTAGAGCAGTGGGAAGCACCGGTGGGGAAAACAAATCCAGCGAACATCGGCTGCTAGCACCTTCAA]
[+] EMBL BM603315 [CCGCCCACGCGTCCGCTTTTGCGGGTTTCGGGTGTACGCGCTTTTCCACCCTGCACACAGAATCTCATCCCAGTTTTCCAATCCTCCCGATATTTCCCCACATTGCCACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAGCTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAGTGTTACGTCTGCTCGAACCAGACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGATCTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTTTTCGCTTGGCGCCCAGAAGCAGTTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCTGCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGACCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCACGGCTATGCTGTCGACCGTGCTCGCCACACTGGTGGCCCTCGGTGTGTTACTGCGAAGCGTTATGGCTAGCTGAAAATTGGACGTAGAGCAGTGGGAAGCACCGGTGGGGAAAACAAATCCAGCGAACATCGGCTGCTAGCACCTTCAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9324#2 ------------------------------------------------------------
consensus_9324#3 ------------------------------------------------------------
consensus_9324#0 CCGCCCACGCGTCCGGTTACTGACAAACGTCAAACGCTGTTTACGGTTCGTTTTTCCCCT 60
consensus_9324#1 ------------------------------------------------------------
consensus_9324#2 -----------GAATCCCCCGAGGTTA-TTTTGCGGGTTTCGGGTGTACGCGCTTTTCCA 48
consensus_9324#3 ------------CCGCCCACGCGTCCGCTTTTGCGGGTTTCGGGTGTACGCGCTTTTCCA 48
consensus_9324#0 CGTAGCCCATTTACGTTGTTTTTGTGCCTTTTGCGGGTTTCGGGTGTACGCGCTTTTCCA 120
consensus_9324#1 ------------------------------------------------------------
consensus_9324#2 CCCTGCACACAGAATCTCATCCCAGTTTTCCAAATCCTCCCGATATTTCCCCACACTGCC 108
consensus_9324#3 CCCTGCACACAGAATCTCATCCCAGTTTTCCAA-TCCTCCCGATATTTCCCCACATTGCC 107
consensus_9324#0 CCCTGCACACAGAATCTCATCCCAGTTTTCCAA-TCCTCCCGATATTTCCCCACACTGCC 179
consensus_9324#1 ------------------------------------------------------------
consensus_9324#2 ACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAG 168
consensus_9324#3 ACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAG 167
consensus_9324#0 ACCTGATTGTATAATTTCCCTTGCTGTGCAAACGCCACACAAGCCATGGACTACTCGAAG 239
consensus_9324#1 ------------------------------------------CTGTTGGCCTACTGGACG 18
*** ***** ** *
consensus_9324#2 CTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAG 228
consensus_9324#3 CTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAG 227
consensus_9324#0 CTCTTGCCATTGGTCGCGGTGCTGCTGATCGGGCTCGTTGGCGAATGTGCCGCTCACGAG 299
consensus_9324#1 GT-TCGTTTTT--CCCCCTCGTAGCCCATTTACGTTGTTTT----TGTGCCTTTTGCGGG 71
* * * ** * * * ** ** * *** ****** * ** *
consensus_9324#2 TGTTACGTCTGCTCGAACCAG-ACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGAT 287
consensus_9324#3 TGTTACGTCTGCTCGAACCAG-ACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGAT 286
consensus_9324#0 TGTTACGTCTGCTCGAACCAG-ACCGGCAACACGGAGAAGTGTCTCAACACGGTCAAGAT 358
consensus_9324#1 TTTCGGGTGTACGCGCTTTTCCACCCTGAACACAGAA-----TCTCATCCCAGT-----T 121
* * ** * * ** *** ***** ** ***** * * ** *
consensus_9324#2 CTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTT 347
consensus_9324#3 CTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTT 346
consensus_9324#0 CTGCCAGCAGGGCGAGGACGCCTGCCTGACGGAGATCCGGTGGGGCAGCACGCCATACTT 418
consensus_9324#1 TTCCAATCCTCCCGATATTTCC--CCAAACTGCCACCTGATTGTATAATTTCCCTTGCTG 179
* * * * *** ** ** ** * * * * * * * ** * **
consensus_9324#2 TTCGCTCGGCGCCCAGAAGCAGATTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCT 407
consensus_9324#3 TTCGCTTGGCGCCCAGAAGCAG-TTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCT 405
consensus_9324#0 TTCGCTCGGCGCCCAGAAGCAG-TTTTACGTGTCGAAGCGCTGCGCCAAGAAGGAGATCT 477
consensus_9324#1 TGCAAACGCCACACA--AGCCA--TGGACTACTCGAAGCTCT-TGCCAAGAAGGAGTTCT 234
* * * * * ** *** * ** ******* ** ************ ***
consensus_9324#2 GCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGA 467
consensus_9324#3 GCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGA 465
consensus_9324#0 GCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGA 537
consensus_9324#1 GCCAGCGCATCCGCACCAAGCACATGCCGTACTGTACGCACATCTGGTACGAGGACTGGA 294
************************************************************
consensus_9324#2 CCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCA 527
consensus_9324#3 CCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCA 525
consensus_9324#0 CCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATCAGTGCCGCGCCCA 597
consensus_9324#1 CCTGTTCCGCCTGCTGCCTCGGCGACCGCTGCAACTACTACGTGATAAGTGCCGCGCCCA 354
********************************************** *************
consensus_9324#2 CGGCTATGCTGTCGACCGTGCTCGCCACACTGGTGGCCCTCGGTGTGTTACTGCGAAGCG 587
consensus_9324#3 CGGCTATGCTGTCGACCGTGCTCGCCACACTGGTGGCCCTCGGTGTGTTACTGCGAAGCG 585
consensus_9324#0 CGGCTATGCTGTCGACCGTGCTCGCCACACTGGTGGCCCTCGGTGTGTTACTGCGAAGCG 657
consensus_9324#1 CGGCTATGCTGTCGACCGTGCTCGCCAAACTGGTGGCCCTCGGTGTGTTACTGCGAAGCG 414
*************************** ********************************
consensus_9324#2 TTATGGCTAGCTGAAAATTGGACGTAGAGCAGTGGGAAGCACCGGTGGG-AAAACAAATC 646
consensus_9324#3 TTATGGCTAGCTGAAAATTGGACGTAGAGCAGTGGGAAGCACCGGTGGGGAAAACAAATC 645
consensus_9324#0 TTATGGCTAGCTGAAAATTGGACGTAGAGCAGTGGGAAGCACCGGTGGG-AAAACAAATC 716
consensus_9324#1 TTATGGCTAGCTGAAAATTGGGCGTAGAGCAGTGGGAAGCACCGGTGGG-AAAACAAATC 473
********************* *************************** **********
consensus_9324#2 CAGCGAACATCGGCTGCTAGCACCTTCAATCCATCTCTTCGTACATTCCATCCGCAAGTA 706
consensus_9324#3 CAGCGAACATCGGCTGCTAGCACCTTCAA------------------------------- 674
consensus_9324#0 CAGCGAACATCGGCTGCTAGCACCTTCAATCCATCTCTTCGTACATTCCATCCGCAAGTA 776
consensus_9324#1 CAGCGAACATCGGCTGCTAGCACCTTCAATCCATCTCTTCGTACATTCCATCCGCAAGTA 533
*****************************
consensus_9324#2 AGCAATCGTCAGTATTCAGTTGCACTTTT-TATCGAAACTATTGCGCGTAAGAGTAAGTA 765
consensus_9324#3 ------------------------------------------------------------
consensus_9324#0 AGCAATCGTCAGTATTCAGTTGCACTTTTCTATCGAATCTATTGCGCGTAAGAGTAAGTA 836
consensus_9324#1 AGCAATCGTCAGTATTCAGTTGCACTTTTTTATCGAAACTATTGCGCGTAAGAGTAAGTA 593
consensus_9324#2 GAAGC------------------------------------------------------- 770
consensus_9324#3 ------------------------------------------------------------
consensus_9324#0 AGAAGCTCGTCCTTTTCCCTCCCCAAACGATAGACAGACGCAAACAATCGTGCCTCTAGC 896
consensus_9324#1 AGAAGCTCGTCCTTTTCCCTCCCCAAACGATAGACAGACGCAAACAATCGTGCCTCTAGC 653
consensus_9324#2 ------------------------------------------------------------
consensus_9324#3 ------------------------------------------------------------
consensus_9324#0 GATAGGTAAAAGTAGTTATAGTGATTGCAGCCGTACGTGAACCCCTACGCACGGGGCAAC 956
consensus_9324#1 GATAGGTAAAAGTAGTTATAGTGATTGCAGCCGTACGTGAACCCCTACGCACGGGGCAAC 713
consensus_9324#2 ------------------------------------------------------------
consensus_9324#3 ------------------------------------------------------------
consensus_9324#0 TAAAGTTAATCGCCTTAAATGGTGTATGAAACGTATCCGTCCAATTATTTTTCTATGTAT 1016
consensus_9324#1 TAAAGTTAATCGCCTTAAATGGTGTATGAAACGTATCCGTCCAATTATTTTTCTATGTAT 773
consensus_9324#2 ------------------------------------------------------------
consensus_9324#3 ------------------------------------------------------------
consensus_9324#0 ACAAATTCTTCTTGACCGCTCTCAGAACCAGATAAGGTCATCGCTGTTGAAATATACCAC 1076
consensus_9324#1 ACAAATTCTTCTTGACCGCTCTCAGAACCAGATAAGGTCATCGCTGTTGAAATATACCAA 833
consensus_9324#2 ------------------------------------------------------------
consensus_9324#3 ------------------------------------------------------------
consensus_9324#0 ACGTGTAACAGTAAAAAAAAAAAAAAAATCAGACGCTNACCTCGGGGG------------ 1124
consensus_9324#1 CACGTGTAACATTGTAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGAGCTGCGGG 893
consensus_9324#2 -
consensus_9324#3 -
consensus_9324#0 -
consensus_9324#1 T 894
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||