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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9334#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1012 fasta sequence
[CCGCGTATTTGTACGACGAGCCGCGTGTTGCGG-TGTCTGTTTTTATTTGCGTCGTGTAAATTACCAACTTTTCGTCGCGGTTTTTTCGGCACCGTAGTGGTTTTCCCTCCCCTCAGTTTTTCACACAGACCCGAAAAACTGTGAGCCAACATGCCGAAAGTGAGCTCCCGGCCGGGGCCGCCCCGGAAAATGTCGATGAACAAGTCGACCCACTCGATGAACCCGGACCGGTCGACCGAGGGCCTGAAGGGGGTGGCCAAGCCGCGCACGAAGGCCACCATCAAGCGGCTGCAGATGTACCGGAACTTTAAGGCGAAGCGGGACCGCCGGGGAAAGATCGTCACGCCCGCCCCGTTCCAGGGGTGGGTCAGCAGC-GGTACGGTGGCGCGCGTCGAACCGTCCCCCAAGTGGTTCGCCAACTCGCGCGTCATCTCGCAAAAGTCGCTGCAAAAGTTCCAGGAAGAGATGGGC-AAGGCGGTGAAGGACCCGTACAAGGTGATCATGAAGCCGACCAACCTGCCGATCACGCTGCTGAACGAGTCGGCCCGCTACCAGCGGGTCCATCTGCTCGACACGGAAAGCTACGACACGACGTTCGGCAAGAAGAAGCTGCGCAAGCGG-CCG-ACGCTGAAGGTGCGCGATCTGGAGGACCTGACGCGCACGGCGGAAGAGTCGGCGGAG-AG-TACGACGAGTCGAAGGATCACGACATCGAGCGGGACGACGGCGGGGTGAAGGATGCGGTGCGGGAGTACATTTTCGCCGCCGG-GGCAGCAAGCGCATCTGGAACGAGCTGCACAAGGTGGTGGACTCGGCGGACGTGCTGCTGCAGGTGCTGGATGCGCGCGACCCGATGGGCACGCGCTCGAAGTACATCGAGACGTTCCTGCGCAAGGAAAAGCCGCACAAGCATCTGTTCTTCGTGCTGAACAAGGTCGACCTGGTGCCGATCTGGGTGACGCAGCGCTGGGTCGCGATACTGAGCAAGGAGTACCCGACGATCGCGTTCCACGCC]
[+] EMBL BM579977 [CCGCGTATTTGTACGACGAGCCGCGTGTTGCGG TGTCTGTTTTTATTTGCGTCGTGTAAATTACCAACTTTTCGTCGCGGTTTTTTCGGCACCGTAGTGGTTTTTCCTCCCCTCAGTTTTTCACACCGCACCGAAAAACTGTGAGCCAACATGCCGAAAGTGAGCTCCCGGCCGGGGCCGCCCCGGAAGATGTCGATGAACAAGTCGACCCACTCGATGAACCCGGACCGGTCGACCGAGGGCCTGAAGGGGGTGGCCAAGCCGCGCACGAAGGCCACCATCAAGCGGCTGCAGATGTACCGGAACTTTAAGGCGAAGCGGGACCGCCGGGGAAAGATCGTCACGCCCGCCCCGTTCCAGGGGTGGGTCAGCAGC GGTACGGTGGCGCGCGTCGAACCGTCCCCCAAGTGGTTCGCCAACTCGCGCGTCATCTCGCAAAAGTCGCTGCAAAAGTTCCAGGAAGAGATGGGC AAGGCGGTGAAGGACCCGTACAAGGTGATCATGAAGCCGACCAACCTGCCGATCACGCTGCTGAACGAGTCGGCCCGCTACCAGCGGGTCCATCTGCTCGACACGGAAAGCTACGACACGACGTTCGGCAAGAAGAAGCTGCGCAAGCGG CCG ACGCTG ]
[+] EMBL BM617368 [ ccgGCCGCGTGTTGCGG TGTCTGTTTTTATTTGCGTCGTGTAAATTACCAACTTTTCGTCGCGGTTTTTTCGGCACCGTAGTGGTTTTCCCTCCCCTCAGTTTTTCACACAGACCCGAAAAACTGTGAGCCAACATGCCGAAAGTGAGCTCCCGGCCGGGGCCGCCCCGGAAAATGTCGATGAACAAGTCGACCCACTCGATGAACCCGGACCGGTCGACCGAGGGCCTGAAGGGGGTGGCCAAGCCGCGCACGAAGGCCACCATCAAGCGGCTGCAGATGTACCGGAACTTTAAGGCGAAGCGGGACCGCCGGGGAAAGATCGTCACGCCCGCCCCGTTCCAGGGGTGGGTCAGCAGCGGGTACGGTGGCGCGCGTCGAACCGTCCCCCAAGTGGTTCGCCAACTCGCGCGTCATCTCGCAAAAGTCGCTGCAAAAGTTCCAGGAAGAGATGGGCAAAGGCGGTGAAGGACCCGTACAAGGTGATCATGAAGCCGACCAACCTGCCGATCACGCTGCTGAACGAGTCGGCCCGCTACCAGCGGGTCCATCTGCTCGACACGGAAAGCT ]
[+] EMBL CNS0969J [ TTGCGGTTTTCTGTTTTTATTAGCGTCGTGTAAATTACCAACTTTTCGCCGCTGTTTTTTCGGCACCGTAGTGGTTTTC CCCCTCATTTTTTCACACCGCCCCAAAAAACTGTAAGTCATCATGCCGAAAGTGAGCTCCCGGCCGGGGCCGCCCCGGAAGATGTCGATGAACAAGTCGACCCACTCGATGAACCCGGACCGGTCGACCGAGGGCCTGAAGGGGGTGGCCAAGCCGCGCACGAAGGCCACCATCAAGCGGCTGCAGATGTACCGGAACTTTAAGGCGAA CGGGATCGCCGGGGAAAGATTGTTACGCCCGCCCCGTTCCAGGGGTGGGTCAGCAGC GGTACGGTGGCGCGCGTCGAACCGTCCCCCAAGTGGTTCGCCAACTCGCGCGTCATCTCGCAAAAGTCGCTGCAAAAGTTCCAGGAAGAGATGGGC AAGGCGGTGAAGGACCCGTACAAGGTGATCATGAAGCCGACCAACCTGCCGATCACGCTGCTGAACGAGTCGGCCCGCTACCAGC GGTCCATCTGCTCGACACGGAAAGCTACGACACGACGTTCGGCAAGAAGAAGCTGCGCAAG GG CCG ACGCTGAAGGTGCGCGATCTGGAGGACCTGACGCGCACGGCGGAAGAGTCGGCGGAG AG TACGACGAGTCGAAGGATCACGACATCGAGCGGGACGACGGCGGGGTGAAGGATGCGGTGCGGGAGTACATTTTCGCCGCCGG GGCAGCAAGCGCATCTGGAACGAGCTGCACAAGGTGGTGGACTCGGCGGACGTGCTGCTGCAGGTGCTGGATGCGCGCGACCCGATGGGCACGCGCTCGAAGTACATCGAGACGTTCCTGCGCAAGGAAAAGCCGCACAAGCATCTGTTCTTCGTGCTGAACAAGGTCGACCTGGTGCCGATCTGGGTGACGCAGCGCTGGGTCGCGATACTGAGCAAGGAGTACCCGACGATCGCGTTCCACGCC]
[+] EMBL BM587101 [ ccgcTGCGG TGTCTGTTTTTATTTGCGTCGTGTAAATTACCAACTTTTCGTCGCGGTTTTTTCGGCACCGTAGTGGTTTTCCCTCCCCTCAGTTTTTCACACAGACCCGAAAAACTGTGAGCCAACATGCCGAAAGTGAGCTCCCGGCCGGGGCCGCCCCGGAAAATGTCGATGAACAAGTCGACCCACTCGATGAACCCGGACCGGTCGACCGAGGGCCTGAAGGGGGTGGCCAAGCCGCGCACGAAGGCCACCATCAAGCGGCTGCAGATGTACCGGAACTTTAAGGCGAAGCGGGACCGCCGGGGAAAGATCGTCACGCCCGCCCCGTTCCAGGGGTGGGTCAGCAGC GGTACGGTGGCGCGCGTCGAACCGTCCCCCAAGTGGTTCGCCAACTCGCGCGTCATCTCGCAAAAGTCGCTGCAAAAGTTCCAGGAAGAGATGGGC AAGGCGGTGAAGGACCCGTACAAGGTGATCATGAAGCCGACCAACCTGCCGATCACGCTGCTGAACGAGTCGGCCCGCTACCAGCGGG ]
[+] EMBL BM585355 [ ccgGCGG TGTCTGTTTTTATTTGCGTCGTGTAAATTACCAACTTTTCGTCGCGGTTTTTTCGGCACCGTAGTGGTTTTCCCTCCCCTCAGTTTTTCACACAGACCCGAAAAACTGTGAGCCAACATGCCGAAAGTGAGCTCCCGGCCGGGGCCGCCCCGGAAAATGTCGATGAACAAGTCGACCCACTCGATGAACCCGGACCGGTCGACCGAGGGCCTGAAGGGGGTGGCCAAGCCGCGCACGAAGGCCACCATCAAGCGGCTGCAGATGTACCGGAACTTTAAGGCGAAGCGGGACCGCCGGGGAAAGATCGTCACGCCCGCCCCGTTCCAGGGGTGGGTCAGCAGC GGTACGGTGGCGCGCGTCGAACCGTCCCCCAAGTGGTTCGCCAACTCGCGCGTCATCTCGCAAAAGTCGCTGCAAAAGTTCCAGGAAGAGATGGGC AAGGCGGTGAAGGACCCGTACAAGGTGATCATGAAGCCGACCAACCTGCCGATCACGCTGCTGAACGAGTCGGCCCGCTACCAGCGGGTCCATCTGCTCGACACGGAAAGCTACGACACGACGTTCGGCAAGAAGAAGCTGCGCAAGCGG CCG ACGCTGAAGGTGCGCGATCTGGAGGACCTGACGCGCACGGCGGAAGAGTCGGCG ]
[+] EMBL BM606596 [ ccgCTGTTTTTATTTGCGTCGTGTAAATTACCAACTTTTCGTCGCGGTTTTTTCGGCACCGTAGTGGTTTTCCCTCCCCTCAGTTTTTCACACAGACCCGAAAAACTGTGAGCCAACATGCCGAAAGTGAGCTCCCGGCCGGGGCCGCCCCGGAAAATGTCGATGAACAAGTCGACCCACTCGATGAACCCGGACCGGTCGACCGAGGGCCTGAAGGGGGTGGCCAAGCCGCGCACGAAGGCCACCATCAAGCGGCTGCAGATGTACCGGAACTTTAAGGCGAAGCGGGACCGCCGGGGAAAGATCGTCACGCCCGCCCCGTTCCAGGGGTGGGTCAGCAGC GGTACGGTGGCGCGCGTCGAACCGTCCCCCAAGTGGTTCGCCAACTCGCGCGTCATCTCGCAAAAGTCGCTGCAAAAGTTCCAGGAAGAGATGGGC AAGGCGGTGAAGGACCCGTACAAGGTGATCATGAAGCCGACCAACCTGCCGATCACGCTGCTGAACGAGTCGGCCCGCTACCAGCGGGTCCATCTGCTCGACACGGAAAGCTACGACACGACGTTCGGCAAGAAGAAGCTGCGCAAGCGG CCG ACGCTGAAAGTGCGCGATCTGGAGGACCTGACGCGCACGGCGG ]
[+] EMBL BM582976 [ ccgGTTTTTATTTGCGTCGTGTAAATTACCAACTTTTCGTCGCGGTTTTTTCGGCACCGTAGTGGTTTTCCCTCCCCTCAGTTTTTCACACAGACCCGAAAAACTGTGAGCCAACATGCCGAAAGTGAGCTCCCGGCCGGGGCCGCCCCGGAAAATGTCGATGAACAAGTCGACCCACTCGATGAACCCGGACCGGTCGACCGAGGGCCTGAAGGGGGTGGCCAAGCCGCGCACGAAGGCCACCATCAAGCGGCTGCAGATGTACCGGAACTTTAAGGCGAAGCGGGACCGCCGGGGAAAGATCGTCACGCCCGCCCCGTTCCAGGGGTGGGTCAGCAGC GGTACGGTGGCGCGCGTCGAACCGTCCCCCAAGTGGTTCGCCAACTCGCGCGTCATCTCGCAAAAGTCGCTGCAAAAGTTCCAGGAAGAGATGGGC AAGGCGGTGAAGGACCCGTACAAGGTGATCATGAAGCCGACCAACCTGCCGATCACGCTGCTGAACGAGTCGGCCCGCTACCAGCGGGTCCATCTGCTCGACACGGAAAGCTACGACACGACGTTCGGCAAGAAGAAGCTGCGCAAGCGG CCGAACGCTGAAAGTGCGCGATCTGGAGGACCTGACGCGCACGGCGGAAGAGTCGGCGG ]
[+] EMBL BX607281 [ GTGTAAATTACCAACTTTTCGTCGCGGTTTTTTCGGCACCGTAGTGGTTTTTCCTCCCCTCAGTTTTTCACACCGCACCGAAAAACTGTGAGCCAACATGCCGAAAGTGAGCTCCCGGCCGGGGCCGCCCCGGAAGATGTCGATGAACAAGTCGACCCACTCGATGAACCCGGACCGGTCGACCGAGGGCCTGAAGGGGGTGGCCAAGCCGCGCACGAAGGCCACCATCAAGCGGCTGCAGATGTACCGGAACTTTAAGGCGAAGCGGGACCGCCGGGGAAAGATCGTCACGCCCGCCCCGTTCCAGGGGTGGGTCAGCAGC GGTACGGTGGCGCGCGTCGAACCGTCCCCCAAGTGGTTCGCCAACTCGCGCGTCATCTCGCAAAAGTCGCTGCAAAAGTTCCAGGAAGAGATGGGC AAGGCGGTGAAGGACCCGTACAAGGTGATCATGAAGCCGACCAACCTGCCGATCACGCTGCTGAACGAGTCGGCCCGCTACCAGCGGGTCCATCTGCTCGACACGGAAAGCTACGACACGACGTTCGGCAAGAAGAAGCTGCGCAAGCGG CCG ACGCTGAAGGTGCGCGATCTGGAGGACCTGACGCGCACGGCGGAAGAGTCGGCGGAGCAG TACGACGAGTCGAAGGATCAGGACATCGAGCGGGACGACGGCGGGGTGAAGGATGCGGTGCGGGAGTACATTTTCGCCGCCGGCGGCAGCAAGCGCATCTGGAACGAGCTGCACAAGGTGGTGGACTCGGCGGACGTGCTGCTGCAGGTGCTGGATGCGCGCGATCCG ]
[+] EMBL BM656520 [ ccgAAATTACCAACTTTTCGTCGCGGTTTTTTCGGCACCGTAGTGGTTTTCCCTCCCCTCAGTTTTTCACACAGACCCGAAAAACTGTGAGCCAACATGCCGAAAGTGAGCTCCCGGCCGGGGCCGCCCCGGAAAATGTCGATGAACAAGTCGACCCACTCGATGAACCCGGACCGGTCGACCGAGGGCCTGAAGGGGGTGGCCAAGCCGCGCACGAAGGCCACCATCAAGCGGCTGCAGATGTACCGGAACTTTAAGGCGAAGCGGGACCGCCGGGGAAAGATCGTCACGCCCGCCCCGTTCCAGGGGTGGGTCAGCAGC GGTACGGTGGCGCGCGTCGAACCGTCCCCCAAGTGGTTCGCCAACTCGCGCGTCATCTCGCAAAAGTCGCTGCAAAAGTTCCAGGAAGAGATGGGC AAGGCGGTGAAGGACCCGTACAAGGTGATCATGAAGCCGACCAACCTGCCGATCACGCTGCTGAACGAGTCGGCCCGCTACCAGCGGGTCCATCTGCTCGACACGGAAAGCTACGACACGACGTTCGGCAAGAAGAAGCTGCGCAAGCGG CCG ACGCTGAAGGTGCGCGATCTGGAGGACCTGACGCGCACGGCGGAAGAGTCGGCGGAGCAG TACGACGAGTCG ]
[+] EMBL CNS09MS0 [ GTGGTTTTCCCTCCCCTCAGTTTTTCACACAGACCCGAAAAACTGTGAGCCAACATGCCGAAAGTGAGCTCCCGGCCGGGGCCGCCCCGGAAAATGTCGATGAACAAGTCGACCCACTCGATGAACCCGGACCGGTCGACCGAGGGCCTGAAGGGGGTGGCCAAGCCGCGCACGAAGGCCACCATCAAGCGGCTGCAGATGTACCGGAACTTTAAGGCGAA CGGGACCGCCGGGGAAAGATCGTCACGCCCGCCCCGTTCCAGGGGTGGGTCAGCAGC GGTACGGTGGCGCGCGTCGAACCGTCCCCCAAGTGGTTCGCCAACTCGCGCGTCATCTCGCAAAAGTCGCTGCAAAAGTTCCAGGAAGAGATGGGC AAGGCGGTGAAGGACCCGTACAAGGTGATCATGAAGCCGACCAACCTGCCGATCACGCTGCTGAACGAGTCGGCCCGCTACCAGC GGTCCATCTGCTCGACACGGAAAGCTACGACACGACGTTCGGCAAGAGGAAGCTGCGCAA CGGCCCG ACGCTGAAGGTGCGCGATCTGGAGGACCTGACGCGCACGGCGGAAGAGTCGGCGGAC AGATACGACGAGTCGAAGGATCACGACATCGAGCGGGACGACGGCGGGGTGAAGGATGCGGTGCGGGAGTACATTTTCGCCGCCGG GGCAGCAAGCGCATCTGGAACGAGCTGCACAAGGTGGTGGACTCGGCGGACGTGCTGCTGCAGGTGCTGGATGCGCGCGACCCGATGGGCACGCGCTCGAAGGACAGCGAGACGTT ]
consensusID : consensus_9334#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 786 fasta sequence
[CCGGGTGAATCTGGAGCTGCACGAAAATGCGCTCTACTGGCCGCGGCTCAAATCGATCACGCTCGGGGACAACGATTGGCACTGCGAGTTTGGGGAGCGGATCTCGGCCATTCTGACGAAGCGTTCGATTGCGGCCGGCGGTGACGGAGAGCGCTGCGGTAGGGAAGGGCAGGTGAAGAAGGGACGGTTTTGCTGTGCGGTGCTGAAGAACCCCTACCTGGATCGGTTGATACGGACGCGCAAAGAGCTGGAGCTGGGCAGGCTGGCGATGCGGGATGGGTTGGCGGTGGGTGCGATTGAGGCAGGCCCACCGGTGGGCGATGTGCACAAGCTGACGGACCAGCTGCGCAAAGCGCTGATGGTGGTGAGCCATCTGAGGGCGGAGAAAGCGGAGCTAGAGCAACGGAACCAGGCGCTCGCGAAGGAGCTGGAGCAGGAGAAGGCCAAGAGTAAAAGCCTTCAGGAGGGGGCGGCGGCGGCGGCGGCAGCGAGCAGACAGTCGGCA-GGGACGGGCGATCTGGCGAAGGAGAAGGCCAATCTTCAGGCGGCACTGGCGAGAGCGCAGAGCGAGATGGCCGGGCTGAGGGCGCAGCTGACCAAGTGCACCTCGACCGTGAACACGCGCACCGGACAAACGGTCATTATTCAGTAGGGTTTGAACTTTTGTGCACATCTTTTGGAGCATTTTTTAAGAAGTTATATAGATGTCAGTAGGAATAAATTCACTTGTAGACATTCGGACGGCAAGTTACGGCAGACATGATAAGCCAAATCCAGCAAAAAAAA]
[+] EMBL BM582900 [CCGGGTGAATCTGGAGCTGCACGAAAATGCGCTCTACTGGCCGCGGCTCAAATCGATCACGCTCGGGGACAACGATTGGCACTGCGAGTTTGGGGAGCGGATCTCGGCCATTCTGACGAAGCGTTCGATTGCGGCCGGCGGTGACGGAGAGCGCTGCGGTAGGGAAGGGCAGGTGAAGAAGGGACGGTTTTGCTGTGCGGTGCTGAAGAACCCCTACCTGGATCGGTTGATACGGACGCGCAAAGAGCTGGAGCTGGGCAGGCTGGCGATGCGGGATGGGTTGGCGGTGGGTGCGATTGAGGCAGGCCCACCGGTGGGCGATGTGCACAAGCTGACGGACCAGCTGCGCAAAGCGCTGATGGTGGTGAGCCATCTGAGGGCGGAGAAAGCGGAGCTAGAGCAACGGAACCAGGCGCTCGCGAAGGAGCTGGAGCAGGAGAAGGCCAAGAGTAAAAGCCTTCAGGAGGGGGCGGCGGCGGCGGCGGCAGCGAGCAGACAGTCGGCAGGGGACGGGCGATCTGGCGAAGGAGAAGGCCAATCTTCAGGCGGCACTGGCGAGAGCGCAGAGCGAGATGGCCGGGCTGAGGGCGCAGCTGACC ]
[+] EMBL BX613369 [ CGATTGGCACTGCGAGTTTGGGGAGCTGATCTCGGCCATTCTGACGAAGCGTTCGATTGCGGCCGGTGGTGACGGAGAGCGCTGCGGTAGGGAAGGGCAGGTGAAGAAGGGACGGTTTTGCTGTGCGGTGCTGAAGAACCCCTACCTGGATCGGTTGATACGGACGCGCAAAGAGCTGGAGCTGGGCAGGCTGGCGATGCGGGATGGGTTGGCGGTGGGTGCGATTGAGGCAGGCCCACCGGTGGGCGATGTGCACAAGCTGACGGACCAGCTGCGCAAAGCGCTGATGGTGGTGAGCCATCTGAGGGCGGAGAAAGCGGAGCTAGAGCAACGGAACCAGGCGCTCGCGAAGGAGCTGGAGCAGGAGAAGGCCAAGAGTAAAAGCCTTCAGGAGGGGGCGGCGGCGGCGGCGGCAGCGAGCAGACAGTCGGCA GGGACGGGCGATCTGGCGAAGGAGAAGGCCAATCTTCAGGCGGCACTGGCGAGAGCGCAGAGCGAGATGGCCGGGCTGAGGGCGCAGCTGACCAAGTGCACCTCGACCGTGAACACGCGCACCGGACAAACGGTCATTATTCAGTAGGGTTTGAACTTTTGTGCACATCTTTTGGAGCATTTTTTAAGAAGTTATATAGATGTCAGTAGGAATAAATTCACTTGTAGACATTCGGACGGCAAGTTACGGCAGACATGATAAG ]
[+] EMBL BM637866 [ ccgGCTGAAGAACCCCTACCTGGATCGGTTGATACGGACGCGCAAAGCGCTGGAGCTGGGCAGGCTGGCGATGCGGGACGGGTTGGCGGTTGGGGCGATTGAGGCAGGCCCACCGGCGGGCGATGTGCACAAGCTGACGGACCAGCTGCGCAAAGCGCTGATGGTGGTGAGCCATCTGAGGGCGGAGAAAGCGGAGCTAGAGCAACGGAACCAGGCGCTCGCGAAGGAGCTGGAGCAGGAGAAGGCCAAGAGTAAAAGCCTTCAGGAGGGGGCGGCGGCGGCGGCGGCAGCGAGCAGACAGTCGGCT GGGACGGGCGATCTGGCGAAGGAGAAGGCCGATCTTCAGGCGGCACTGGCGAGAGCGCAGAGCGAGATGGCCGGGCTGAGGGCGCAGCTGACCAAGTGCACCTCGACCGTGAACACGCGCACCGGACAAACGGTCATTATTCAGTAGAGTTTGAACTTTTGCGCACATCTTTTGGAGCATTTTTTAAAAAGTTATATAGATGTCAGTAGGAATAAATTCACTTGT ]
[-] EMBL AGA283656 [ AGCTAGAGCAACGGAACCAGGCGCTCGCGAAGGAGCTGGAGCAGGAGAAGGCCAAGAGTAAAAGCCTTCAGGAGGGGGCGGCGGCGGCGGCGGCAGCGAGCAGACAGTCGGCA GGGACGGGCGATCTGGCGAAGGAGAAGGCCAATCTTCAGGCGGCACTGGCGAGAGCGCAGAGCGAGATGGCCGGGCTGAGGGCGCAGCTGACCAAGTGCACCTCGACCGTGAACACGCGCACCGGACAAACGGTCATTATTCAGTAGGGTTTGAACTTTTGTGCACATCTTTTGGAGCATTTTTTAAGAAGTTATATAGATGTCAGTAGGAATAAATTCACTTGTAGACATTCGGACGGCAAGTTACGGCAGACATGATAAGCCAAATCCAGCAAAAAAAA]
consensusID : consensus_9334#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 685 fasta sequence
[GCAGAATCCGCACGAGNGCACGTTCAAAAGTAACCACCCGAAACAACCGCTCCCATACCAAAACCACCAAAATGAAGTGCATGGTAGCTGCAGTCATCTTGGCCCTGGCCGTCGTTTCGGAAGCCGGACTCCTGCCGTACGGTGGCTGGCCTTATGGTCATCTGGCTGCCCCGACCGTCATCCAGTCGAATGTGCTGGCCCACCCGTACGGTGCGATCTCGCACGCCGCATCCACGCTGCTTACGCTCCGCATGCTGCCATCCTGGCCGCGCCGCACGCTGCCATTCTGGCCGCTCCACATGCTGCCATCTTGGCCGCGTCCGCATGCCCCAGCTGCGTCGGTCGCTCACCATGCTGGAGTCGTCCCTGGAGCCACCTCCGTCACTGCTACCCGAGGTGCTGTGCATGTCGCGCCCCTGCCTGGACATGCCGTACTCCCAGCAGCAGCTGAACCTGGCCCCGGACCCTGGCACGCTCTAAGCCATCCCATCCCCTAGTCAGTGTGCCCCCGGGTTCGGGTGCTCTGGAACATTCTATCTCTTACCATCTGTACGTCGTATCGGCTACTAATTGGTTTCAAAGAAGGTTAANCGCGTATCCCCGAATTNTGAATTGGGTAAGAAGTTTACAANTCGGTATTCGGAAGCCCGCCAGACTTTGCATTTCCGGGAACCCTGGAAAACAG]
[+] EMBL BX467919 [GCAGAATCCGCACGAGNGCACGTTCAAAAGTAACCACCCGAAACAACCGCTCCCATACCAAAACCACCAAAATGAAGTGCATGGTAGCTGCAGTCATCTTGGCCCTGGCCGTCGTTTCGGAAGCCGGACTCCTGCCGTACGGTGGCTGGCCTTATGGTCATCTGGCTGCCCCGACCGTCATCCAGTCGAATGTGCTGGCCCACCCGTACGGTGCGATCTCGCACGCCGCATCCACGCTGCTTACGCTCCGCATGCTGCCATCCTGGCCGCGCCGCACGCTGCCATTCTGGCCGCTCCACATGCTGCCATCTTGGCCGCGTCCGCATGCCCCAGCTGCGTCGGTCGCTCACCATGCTGGAGTCGTCCCTGGAGCCACCTCCGTCACTGCTACCCGAGGTGCTGTGCATGTCGCGCCCCTGCCTGGACATGCCGTACTCCCAGCAGCAGCTGAACCTGGCCCCGGACCCTGGCACGCTCTAAGCCATCCCATCCCCTAGTCAGTGTGCCCCCGGGTTCGGGTGCTCTGGAACATTCTATCTCTTACCATCTGTACGTCGTATCGGCTACTAATTGGTTTCAAAGAAGGTTAANCGCGTATCCCCGAATTNTGAATTGGGTAAGAAGTTTACAANTCGGTATTCGGAAGCCCGCCAGACTTTGCATTTCCGGGAACCCTGGAAAACAG]
consensusID : consensus_9334#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 213 fasta sequence
[TCGACTTTTCCGCGTCACCTNCATCAAGCAACCGCTCCAAGATGAACAAGCTACTCACCGGNGGACTACTGTTCCTGCTCGTGGCCGGCTCGCTCGTGTCCGGCTCGATGTTTGGCCCGTTCNGACCGNTCGGACCGGCCGCTCATCTGCCNGGCGCAGTCGGCGGCTATCCGGGNGCGGACGGAGGGTATCNGGGCGCGGTCGGNGGTTTGC]
[+] EMBL BX625669 [TCGACTTTTCCGCGTCACCTNCATCAAGCAACCGCTCCAAGATGAACAAGCTACTCACCGGNGGACTACTGTTCCTGCTCGTGGCCGGCTCGCTCGTGTCCGGCTCGATGTTTGGCCCGTTCNGACCGNTCGGACCGGCCGCTCATCTGCCNGGCGCAGTCGGCGGCTATCCGGGNGCGGACGGAGGGTATCNGGGCGCGGTCGGNGGTTTGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9334#1 ------------------------------------------------------------
consensus_9334#3 ------------------------------------------------------------
consensus_9334#0 CCGCGTATTTGTACGACGAGCCGCGTGTTGCGGTGTCTGTTTTTATTTGCGTCGTGTAAA 60
consensus_9334#2 ------------------------------------------------------------
consensus_9334#1 ------------------------------------------------------------
consensus_9334#3 ------------------------------------------------------------
consensus_9334#0 TTACCAACTTTTCGTCGCGGTTTTTTCGGCACCGTAGTGGTTTTCCCTCCCCTCAGTTTT 120
consensus_9334#2 ------------------------------------------------------------
consensus_9334#1 ------------------------------------------------------------
consensus_9334#3 ------------------------------------------------------------
consensus_9334#0 TCACACAGACCCGAAAAACTGTGAGCCAACATGCCGAAAGTGAGCTCCCGGCCGGGGCCG 180
consensus_9334#2 ------------------------------------------------------------
consensus_9334#1 -----------------------------CCGGGTGAATCTGGAGCTGCACGAAAATGCG 31
consensus_9334#3 ------------------------------------------------------------
consensus_9334#0 CCCCGGAAAATGTCGATGAACAAGTCGACCCACTCGATGAACCCGGACCGGTCGACCGAG 240
consensus_9334#2 ------------------------------------------------------------
consensus_9334#1 CTCTACTGGCCGCGGCTCAAATCGATCACGCTCGGGGACAACGATTGGCACTGCGAGTTT 91
consensus_9334#3 ------------------------------------------------------------
consensus_9334#0 GGCCTGAAGGGGGTGGCCAAGCCGCGCACGAAGGCCACCATCAAGCGGCTGCAGATGTAC 300
consensus_9334#2 --------GCAGAATCCGCACGAGNGCACGTTCAAAAGTAACCACCCGAAACAACCGCTC 52
consensus_9334#1 GGGGAGCGGATCTCGGCCATTCTGACGAAGCGTTCGATTGCGGCCGGCGGTGACGGAGAG 151
consensus_9334#3 ------------------------------------------------------------
consensus_9334#0 CGGAACTTTAAGGCGAAGCGGGACCGCCGGGGAAAGATCGTCACGCCCGCCCCGTTCCAG 360
consensus_9334#2 CCATACCAAAACCACCAAAATGAAGTGCATGGTAGCTGCAGTCATCTTGGCCCTGGCCGT 112
consensus_9334#1 CGCTGCGGTAGGGAAGGGCAGGTGAAGAAGGGACGGTTTTGCTGTGCGGTGCTGAAGAAC 211
consensus_9334#3 -----------------------------------------------------TCGACTT 7
consensus_9334#0 GGGTGGGTCAGCAGCGGTACGGTGGCGCGCGTCGAACCGTCCCCCAAGTGGTTCGCCAAC 420
consensus_9334#2 CGTTTCGGAAGC--CGGACTCCTGCCGTACGGTGGCTGGCCTTATGGTCATCTGGCTGCC 170
consensus_9334#1 CCCTACCTGGATCGGTTGATACGGACGCGCAAAGA-GCTGGAGCTGGGCAGGCTGGCGAT 270
consensus_9334#3 TTCCGCGTCACCTNCATCAAGCAACCGCTCCAAGATGAACAAGCTACTCACCGGNGGACT 67
consensus_9334#0 TCGCGCGTCATCTCGCAAAAGTCGCTGCA-AAAGTTCCAGGAAGAGATGGGCAAGGCGGT 479
consensus_9334#2 CCGACCGTCATCCAGTCGAATGTGCTGGCCCACCC-GTACGGTGCGATCTCGCACGCCGC 229
* * * * * *
consensus_9334#1 GCGGGATGGGTTGGCGGTGGGTGCGATTGAGGCAGGCCCACCGGTGG-GCGATGTGCACA 329
consensus_9334#3 ACTGTTCCTGCTCGTGGCCGGCTCGCTCGTGTCCGGCTCGATGTTTG-GCC-CGTTCN-G 124
consensus_9334#0 GAAGGACCCGTACAAGGTGATCATGAAGCCGACCAACCTGCCGATCACGCTGCTGAACGA 539
consensus_9334#2 ATCCACGCTGCTTACGCTCCGCATGCTGCCATCCTGGCCGCGCCGCACGCTGCCATTCTG 289
* * * * **
consensus_9334#1 AGCTGACGG--ACCAGCTG-CGCAAAGCG-----CTGATG--GTGGTGAGCCATCTGAGG 379
consensus_9334#3 ACCGNTCGG--ACCGGCCG-CTCATCTGC-----CNGGCGCAGTCGGCGGCTATCCGGGN 176
consensus_9334#0 GTCGGCCCGCTACCAGCGGGTCCATCTGC-----TCGACACGGAAAGCTACGACACGACG 594
consensus_9334#2 GCCGCTCCACATGCTGCCATCTTGGCCGCGTCCGCATGCCCCAGCTGCGTCGGTCGCTCA 349
* * * ** *
consensus_9334#1 GCGGAGAAAGCGGAGCTAGAGCAACGGAACCAGGCGCTCGCGAAGGAGCTGGAGCAGGAG 439
consensus_9334#3 GCGGACGGAGGGTATCNGGG----CGCGGTCGGNGGTTTGC------------------- 213
consensus_9334#0 TTCGGCAAGAAGAAGCTGCGCAAGCGGCCGACGCTGAAGGTGCGCGATCTGGAGGACCTG 654
consensus_9334#2 CCATGCTGGAGTCGTCCCTGGAGCCACC-TCCGTCACTGCTACCCGAGGTGCTGTGCATG 408
* * *
consensus_9334#1 AAGGCCAAGAGTAAAAGCCTTCAGGAGGGGGCGGCGGCGGCGGCGGCAGCGAGCAGACAG 499
consensus_9334#3 ------------------------------------------------------------
consensus_9334#0 ACGCGCACGGCGGAAGAGTCGGCGGAGAGTACGACGAGTCGAAGGATCACGACATCGAGC 714
consensus_9334#2 TCGCGCCCCTGCCTGGACATGCCGTACTCCCAGCAGCAGCTGAACCTGGCCCCGGACCCT 468
consensus_9334#1 TCGGCAGGGACGGGCGATCTGGCGAAGGAGAAGGCCAATCTTCAGGCGGCACTGGCGAGA 559
consensus_9334#3 ------------------------------------------------------------
consensus_9334#0 GGGACGACGGCGGGGTGAAGGATGCGGTGCGGGAGTACATTTTCGCCGCCGGGGCAGCAA 774
consensus_9334#2 GGCACGCTCTAAGCCATCCCATCCCCTAGTCAGTGTGCCCCCGGGTTCGGGTGCTCTGGA 528
consensus_9334#1 GCGCAGAGCGAGATGGCCGGGCTGAGGGCGCAGCTGACCAAGTGCACCTCGACCGTGAAC 619
consensus_9334#3 ------------------------------------------------------------
consensus_9334#0 GCGCATCTGGAACGAGCTGCACAAGGTGGTGGACTCGGCGGACGTGCTGCTGCAGGTGCT 834
consensus_9334#2 ACATTCTATCTCTTACCATCTGTACGTCGTATCGGCTACTAATTGGTTTCAAAGAAGGTT 588
consensus_9334#1 ACGCGCACCGGACAAACGGTCATTATTCAGTAGGGTTTGAACTTTTGTGCACATCTTTTG 679
consensus_9334#3 ------------------------------------------------------------
consensus_9334#0 GGATGCGCGCGACCCGATGGGCACGCGCT-CGAAGTACATCGAGACGTTCCTGCGCAAGG 893
consensus_9334#2 AANCGCGTATCCCCGAATTNTGAATTGGGTAAGAAGTTTACAANTCGGTATTCGGAAGCC 648
consensus_9334#1 GAGCATTTTTTAAGAAGTTATATAGATGTCAGTAGGAATAAATTCACTTGTAGACATTCG 739
consensus_9334#3 ------------------------------------------------------------
consensus_9334#0 AAAAGCCGCACAAGCATCTGTTCTTCGTGCTGAACAAGGTCGACCTGGTGCCGATCTGGG 953
consensus_9334#2 CGCCAGACTTTGCATTTCCGGGAACCCTGGAAAACAG----------------------- 685
consensus_9334#1 GACGGCAAGTTACGGCAGACATGATAAGCCAAATCCAGCAAAAAAAA------------ 786
consensus_9334#3 -----------------------------------------------------------
consensus_9334#0 TGACGCAGCGCTGGGTCGCGATACTGAGCAAGGAGTACCCGACGATCGCGTTCCACGCC 1012
consensus_9334#2 -----------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||