These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9336#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1360 fasta sequence [TTTTTTTTTTTTTTTTTTTAAAGCGATCAACG-TCATAATTATTTGCGCACGTTCTTTTGTTTTTCTTCAAACCGATCGACGGACAGTCGGGGATGGTGTGTCGTCTGCTGATTGCCCCATTTTCAACACGATATATCAGCTGCCTTAAACCTTCTTTACAATCTGCACCACATCCTCATCGTTCAGCACGTGATCGATACCGACCTTTTGCGGTTGATGCTTGACGGACGAACCCCACACAAGTGCATATTTAAATTCTTTCGCAATCGTTCGGTGAAGCTTGTTACAGAAACTTT-CCACGGTAGTATGCTCGTGGTGCAGCACAATCGGTGAGCTGTAGTCCGGCAGCTGGCCCTTCGGTTTGGTATAGATTCGCACCAGCTTCAGATACTGCCACATCATATCGAGCAAATC-GTCAAAGTTCCAGTGATGATGGGCAGAGATCGGTACGCAGTGCGGGATTTTATAGATGACGTCCAGCTCCTCGATCGAAATCTGATCGA-TCTTGTTCAGCAGATAGATGCACGGGATGTAAATGCGGTTGCCCTCG-ATCACGTCGATCAGATCGTCCGCCGTCGCATCGTACTTCAGCGTAATGTCCGCATTATGAATCTTGTACTCGCCCAGAATCGTCTTCACCGTGTCCAGGTCCAGCTCCGACTGTGCTACGGTGGCGTTCAGGTTCACTCCGCCCTTGTCCTTCCGGCGGTAGGAAATGTTCGGCGGCTGCTTGTTCAGCCGCAGCCCGAACCCTTCCAACTCGTGCTCGAGCAGCTTCTTG-TGCGTGAGCGG-TTTCAGCACGTCCAACACCATGAAAATCAGATTGCAGGTACGTGCCAC-CGCAATTACCTGCCGACCGCGACCCTTACCATCCTTCGCACCTTCGATGATTCCGGGCAAATCCAGCAGCTGTATCTTGGCGCCCTTGTACTTGATACAGCCCGGCAC-GGTCGTCAGCGTGGTGAACTCGTATGCAGCCACCTCCGAGTAGACACCGGCCAGATTGGACAGCAGGGTCGATTTGCCTACCGAGGGAAACCCAACAAAGCCGACCCGGGCGTCACCGGTTTTGGAAACTTCGAAACCCTGTTCCGATGCACCGCCGCCACCCTTGGGAGTGATGAGCTCGCGCCGCAGCTTGGCCAACCGTGCCTTCAGCAAGCCCAAATGTCCCGCCGTAGCCTTGTTACGTTGGGTACGAGCCATCTCCGACTCGATTTGAGCAATCTTTTCCAGAATCGTACTCATCTTGCACGCTCTTGCAGCAGCTCGGAGTAGGTCAAATAATTGAACGAACGAGATAAATCATAGATAGAAGTGGCACGCAGCAGCACACAAATTCTGTCGGACGCGTGGGCGG] [+] EMBL AGA282408 [TTTTTTTTTTTTTTTTTTTAAAGCGATCAACGTTCATAATTATTTGCGCACGTTCTTTTGTTTTTCTTCAAACCGATCGACGGACAGTCGGGGATGGTGTGTCGTCTGCTGATTGCCCCATTTTCAACACGATATATCAGCTGCCTTAAACCTTCTTTACAATCTGCACCACATCCTCATCGTTCAGCACGTGATCGATACCGACCTTTTGCGGTTGATGCTTGACGGACGAACCCCACACAAGTGCATATTTAAATTCTTTCGCAATCGTTCGGTGAAGCTTGTTACAGAAACTTT CCACGGTAGTATGCTCGTGGTGCAGCACAATCGGTGAGCTGTAGTCCGGCAGCTGGCCCTTCGGTTTGGTATAGATTCGTACCAGCTTCAGATACTGCCACATCATATCGAGCAAATC GTCAAAGTTCCAG ] [+] EMBL CNS08YMS [ aaCGATCAACT TCATAATTATTTGCGCACGTTCTTTTGTTTTTCTTCAAACCGATCGACGGACAGTCGGGGATGGTGTGTCGTCTGCTGATTGCCCCATTTTCAACACGATATATCAGCTGCCTTAAACCTTCTTTACAATCTGCACCACATCCTCATCGTTCAGCACGTGATCGATACCGACCTTTTGCGGTTGATGCTTGACGGACGAACCCCACACAAGTGCATATTTAAATTCTTTCGCAATCGTTCGGTGAAGCTTGTTACAGAAACTTT CCACGGTAGTATGCTCGTGGTGCAGCACAATCGGCCCCCTGTAGTCCGGCAGCTGGCCCTTCGGTTTGGTATAGATTCGCACCAGCTTCAGATACTGCCACATCATATCGAGCAAATC GTCAAAGTTCCAGTGATGATGGGCAGAGATCGGTACGCAGTGCGGGATTTTATAGATGACGTCCAGCTCCTCGATCGAAATCTGATCGA TCTTGTTCAGCAGATAGATGCACGGGATGTAAATGCGGTTGCCCTCG ATCACGTCGATCAGATCGTCCGCCGTTCCATCGTACTTCAGCGTAATGTCCGCATTATGAATCTTGTACTCGCCCAGAATCGTCTTCACCGTGTCCAGGTCCAGCTCCGACCGTGCTACGGTGGCGTTCAGGTTCACTCCGCCCTTGTCCTTCCGGCGGTAGGAAATGTTCGGCGGCTGCTTGTTCAGCCGCAGCCCGAACCCTTCCAACTCGTGCTCGAGCAGCTTCTTG TGCGTGA CGG TTTCAGCACGTCCAACACCATGAAAATCAGATTGCAGGTACGTGCCAC CGCA ] [+] EMBL CNS08RUI [ ctac TCATAATTATTTGCGCACGTTCTTTTGTTTTTCTTCAAACCGATCGACGGACAGTCGGGGATGGTGTGTCGTCTGCTGATTGCCCCATTTTCAACACGATATATCAGCTGCCTTAAACCTTCTTTACAATCTGCACCACATCCTCATCGTTCAGCACGTGATCGATACCGACCTTTTGCGGTTGATGCTTGACGGACGAACCCCACACAAGTGCATATTTAAATTCTTTCGCAATCGTTCGGTGAAGCTTGTTACAGAAACTTT CCACGGTAGTATGCTCGTGGTGCAGCACAATCGGTGAGCTGTAGTCCGGCAGCTGGCCCTTCGGTTTGGTATAGATTCGCACCAGCTTCAGATACTGCCACATCATATCGAGCAAATC GTCAAAGTTCCAGTGATGATGGGCAGAGATCGGTACGCAGTGCGGGATTTTATAGATGACGTCCAGCTCCTCGATCGAAATCTGATCGA TCTTGTTCAGCAGATAGATGCACGGGATGTAAATGCGGTTGCCCTCG ATCACGTCGATCAGATCGTCCGCCGTTTCATCGTACTTCAGCGTAATGTCCGCATTATGAATCTTGTACTCGCCCAGAATCGTCTTCACCGTGTCCAGGTCCAGCTCCGACTGTGCTACGGTGGCGTTCAGGTTCACTCCGCCCTTGTCCTTCCGGCGGTAGGAAATGTTCGGCGGCTGCTTGTTCAGCCGCAGCCCGAACCCTTCCAACTCGTGCTCGAGCAGCTTTTTG TGCGTGA CGG TTTCAGCACGTCCAACACCATGAAAATCAGATTGCAGGTACGTGCCAC CGCAATTACCTGCCGACCGCGACCCTTACCATCCTTCGCACCTTCGATGATTCCGGGCAAATCCAGCAGCTGTATCTTGGCGCCCTTGTACTTGATACAGCCCGGCAC GTTCGTCAGCGTGGTGAACTCGTATGCAGCCACCTCCGAGTAGAC ] [+] EMBL CNS08DH6 [ ATTATTTGCGCACGTTCTTTTGTTTTTCTTCAAACCGATCGACGGACAGTCGGGGATGGTGTGTCGTCTGCTGATTGCCCCATTTTCAACACGATATATCAGCTGCCTTAAACCTTCTTTACAATCTGCACCACATCCTCATCGTTCAGCACGTGATCGATACCGACCTTTTGCGGTTGATGCTTGACGGACGAACCCCACACAAGTGCATATTTAAATTCTTTCGCAATCGTTCGGTGAAGCTTGTTACAGTTTCTTT CCACGGTAGTATGCTCGTGGTGCAGCACAATCGGTGAGCTGTAGTCCGGCAGCTGGCCCTTCGGTTTGGTATAGATTCGCACCAGCTTCAGATACTGCCACATCATATCGAGCAAATCTTTCAAAGTTCCAGTGATGATGGGCAGAGATCGGTACGCAGTGCGGGATTTTATAGATGACGTCCAGCTCCTCGATCGAAATCTGATCGATTCTTGTTCAGCAGATAGATGCACGGGATGTAAATGCGGTTGCCCTCG ATCACGTCGATCAGATCGTCCGCCGTCGCATCGTACTTCAGCGTAATGTCCGCATTATGAATCTTGTACTCGCCCAGAATCGTCTTCACCGTGTCCAGGTCCAGCTCCGACTGTTCTACGGTGGCGTT ] [+] EMBL CNS08YVF [ CTTTTGTTTTTCTTCAAACCGATCGACGGACAGTCGGGGATGGTGTGTCGTCTGCTGATTG CCCATTTTCAACACGATATATCAGCTGCCTTAAACCTTCTTTACAATCTGCACCACATCCTCATCGTTCAGCACGTGATCGATACCGACCTTTTGCGGTTGATGCTTGACGGTCGAACCCCACACAAGTGCATATTTAAATTCTTTCGCAATCGTTCGGTGAAGCTTGTTACAGAAACTTT CCACGGTAGTATGCTCGTGGTGCAGCACAATCGGTGAGCTGTAGTCCGGCAGCTGGCCCTTCGGTTTGGTATAGATTCGCACCAGCTTCAGATACTGCCACATCATATCGAGCAAATC GTCAAAGTTCCAGTGATGATGGGCAGAGATCGGTACGCAGTGCGGGATTTTATAGATGACGTCCAGCTCCTCGATCGAAATCTGATCGA TCTTGTTCAGCAGATAGATGCACGGGATGTAAATGCGGTTGCCCTCG ATCACGTCGATCAGATCGTCCGCCGTTCCATCGTACTTCAGCGTAATGTCCGCATTATGAATCTTGTACTCGCCCAGAATCGTCTTCACCGTGTCCAGGTCCAGCTCCGACTGTGCTACGGTGGCGTTCAGGTTCACTCCGCCCTTGTCCTTCCGGCGGTAGGAAATGTTCGGCGGCTGCTTGTTCAGCCGCAGCCCGAACCCTTCCAACTCGTGCTCGAGCAGCTTCTTGCCGCGTGAGCGGTTTTCAGCACGTCCAACACCATGAAAATCAGATTGCAGGTACGTGCCAC CGCAATTACCTGCCGACCG ] [+] EMBL CNS08Q20 [ GTTTTTCTTCAAACCGATCGACGGACAGTCGGGGATGGTGTGTCGTCTGCTGATTGCCCCATTTTCAACACGATATATCAGCTGCCTTAAACCTTCTTTACAATCTGCACCACATCCTCATCGTTCAGCACGTGTTCGATACCGACCTTTTGCGGTTGATGCTTGACGGACGAACCCCACACAAGTGCATATTTAAATTCTTTCGCAATCGTTCGGTGAAGCTTGTTACAGAAACTTT CCACGGTAGTATGCTCGTGGTGCAGGGGGGTCGGTGAGCTGTAGTCCGGCAGCTGGCCCTTCGGTTTGGTATAGATTCGCACCAGCTTCAGATACTGCCACATCATATCGAGCAAATC GTCAAAGTTCCAGTGATGATGGGCAGAGATCGGTACGCAGTGCGGGATTTTATAGATGACGTCCAGCTCCTCGATCGAAATCTGATCGA TCTTGTTCAGCAGATAGATGCACGGGATGTAAATGCGGTTGCCCTCG ATCACGTCGATCAGATCGT ] [-] EMBL BM647281 [ CAACACGATATATCAGCTGCCTTAAACCTTCTTTACAATCTGCACCACATCCTCGTCGTTCAGCACGTGATCGATACCGACCTTTTGCGGTTGATGCTTGACGGACGAACCCCACACAAGTGCATATTTAAATTCTTTCGCAATCGTTCGGTGAAGCTTGTTACAGAAACTTT CCACGGTAGTATGCTCGTGGTGCAGCACAATCGGTGAGCTGTAGTCCGGCAGCTGGCCCTTCGGTTTGGTATAGATTCGCACCAGCTTCAGATACTGCCACATCATATCGAGCAAATC GTCAAAGTTCCAGTGATGATGGGCAGAGATCGGTACGCAGTGCGGGATTTTATAGATGACGTCCAGCTCCTCGATCGAAATCTGATCAA TCTTGTTCAGCAGATAGATGCACGGGATGTAAATGCGGTTGCCCTCG ATCACGTCGATCAGATCGTCCGCCGTCGCATCGTACTTCAGCGTAATGTCCGCATTATGAATCTTGTACTCGCCCAGAATCGTCTTCACCGTGTCCAGGTCCAGCTCCGACTGTGCTACGGTGGCGTTCAGGTTCACTCCGCCCTTGTCCTTCCGGCGGTAGGAAATGTTCGGCGGCTGCTTGTTCAGCCGCAGCCCGAACCCTTCCAACTCGTGCTCGAGCAGCTTCTTGcgg ] [-] EMBL CNS08DH5 [ CCACACAAGTGCATATTTAAATTCTTTCGCAATCGTTCGGTGAAGCTTGTTACAGAAACTTT CCACGGTAGTATGCTCGTGGTGCAGCACAATCGGTGAGCTGTAGTCCGGCAGCTGTGCCTTCGGTTTGGTATAGATTCGCACCAGCTTCAGATACTGCCACATCATATCGAGCAAATC GTCAAAGTTCCAGTGATGATGGGCAGAGATCGGTACGCAGTGCGGGATTTTATAGATGACGTCCAGCTCCTCGATCGAAATCTGATCGA TCTTGTTCAGCAGATAGATGCACGGGATGTAAATGCGGTTGCCCTCGAATCACGTCGATCAGATCGTCCGCCGTCGCATCGTACTTCAGCGTAATGTCCGCATTATGAATCTTGTACTCGCCCAGAAAATTCTTCACCGTGTCCAGGTCCAGCTCCGACTGTGCTACGGTGGCGTTCAGGTTCACTCCGCCCTTGTCCTTCCGGCGGTAGGAAATGTTCGGCGGCTGCTTGTTCAGCCGCAGCCCGAACCAAAAAAACTCGTGCTCGAGCAGCTTCTTG TGCGTGAGCGG TTTCAGCACGTCCAACACCATGAAAATCAGATTGTAGGTACGTGCCACGCGCAATTACCTGCCGACCGCGACCCTTACCATCCTTCGCACCTTCGATGATTCCGGGCAAATCCAGCAGCTGTATCTTGGCGCCCTTGTACTTGATACAGCCCGGCAC GGTCGTCAGCGTGGTGAACTCGTATGCAGCCACCTCCGAGTAGACACCGGCCAGATTGGACAGCAaa ] [-] EMBL BM608736 [ ACAGAAACTTTGCCACGGTAGTATGCTCGTGGTGCAGCACAATCGGTGAGCTGTAGTCCGGCAGCTGGCCCTTCGGTTTGGTATAGATTCGCACCAGCTTCAGATACTGCCACATCATATCGAGCAAATC GTCAAAGTTCCAGTGGTGATGGGCAGAGATTGGTACGCAGTGCGGGATTTTATAGATGACGTCCAGCTCCTCGATCGAAATCTGATCGA TCTTGTTCAGCAGATAGATGCACGGGATGTAAATGCGGTTGCCCTCG ATCACGTCGATCAGATCGTCCGCCGTCGCATCGTACTTCAGCGTAATGTCCGCATTATGAATCTTGTACTCGCCCAGAATCGTCTTCACCGTGTCCAGGTCCAGCTCCGACTGTGCTACGGTGGCGTTCAGGTTCACTCCACCCTTGTCCTTCCGGCGGTAGGAAATGTTCGGCGGCTGCTTGTTCAGCCGCAGCCCGAACCCTTCCAACTCGTGCTCGAGCAGCTTCTTG TGCGTGAGCGG TTTCAGCACGTCCAGCACCATGAAAATCAGATTGCAGGTACGTGCCAC CGCAATTACCTGCCGACCGCGACCCTTACCATCCTTCGCACCTTCGATGATTCCGGGCAAATCCAGCAGCTGTATCTTGGCGCCCTTGTACTTGATACAGCCCGGCAC GGTCGTCAGCGTGGcgg ] [-] EMBL AGA281585 [ GTTCCAGTGATGATGGGCAGAGATCGGTACGCAGTGCGGGATTTTATAGATGACGTCCAGCTCCTCGATCGAAATCTGATCGA TCTTGTTCAGCAGATAGATGCACGGGATGTAAATGCGGTTGCCCTCG ATCACGTCGATCAGATCGTCCGCCGTCGCATCGTACTTCAGCGTAATGTCCGCATTATGAATCTTGTACTCGCCCAGAATCGTCTTCACCGTGTCCAGGTCCAGCTCCGACTGTGCTACGGTGGCGTTCAGGTTCACTCCGCCCTTGTCCTTCCGGCGGTAGGAAATGTTCGGCGGCTGCTTGTTCAGCCGCAGCCCGAACCCTTCCAACTCGTGCTCGAGCAGCTTCTTG TGCGTGAGCGG TTTCAGCACGTCCAACACCATGAAAATCAGATTGCAGGTACGTGCCAC CGCAATTACCTGCCGACCGCGACCCTTACCATCCTTCGCACCTTCGATGATTCCGGGCAAATCCAGCAGCTGTATCTTGGCGCCCTTGTACTTGATACAGCCCGGCAC GGTCGTCAGCGTGGTGAACTCGTATGCAGCCACCTCCGAGTAGACACCGGCCAGATTGGACAGCAGGGTCGATTTGCCTACCGAGGGAAACCCAACAAAGCCGACCCGGGCGTCACCGGTTTTGGAAACTTCGAAACCCTGTTCCGATGCACCGCCGCCACCCTTGGGAGTGATGAGCTCGCGCCGCAGCTTGGCCAACCGTGCCTTCAGCAAGCCCAAATGTCCCGCCGTAGCCTTGTTACGTTGGGTACGAGCCATCTCCGACTCGATTTGAGCAATCTTTTCCAGAATCGTACTCATCTTGCACGCTCTTGCAGCAGCTCGGAGTAGGTCAAATAATTGAACGAACGAGAT ] [-] EMBL BM580473 [ CTTCGATGATTCCGGGCAAATCCAGCAGCTGTATCTTGGCGCCCTTGTACTTGATACAGCCCGGCACGGGTCGTCAGCGTGGTGAACTCGTATGCAGCCACCTCCGAGTAGACACCGGCCAGATTGGACAGCAGGGTCGATTTGCCTACCGAGGGAAACCCAACAAAGCCGACCCGGGCGTCACCGGTTTTGGAAACTTCGAAACCCTGTTCCGATGCACCGCCGCCACCCTTGGGAGTGATGAGCTCGCGCCGCAGCTTGGCCAACCGTGCCTTCAGCAAGCCCAAATGTCCCGCCGTAGCCTTGTTACGTTGGGTACGAGCCATCTCCGACTCGATTTGAGCAATCTTTTCCAGAATCGTACTCATCTTGCACGCTCTTGCAGCAGCTCGGAGTAGGTCAAATAATTGAACGAACGAGATAAATCATAGATAGAAGTGGCACGCAGCAGCACACAAATTCTGTCGGACGCGTGGGCGG] consensusID : consensus_9336#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 760 fasta sequence [GAATCGNGCACGAGGTCTACCAGTGATATACGCTCGTCTCAAAGGTTAAAGCCATGCATGTCTAAGTACAAGCTTCCTAGAAAGTGAAACCGCATAAGGCTCAGTATAACAGCTATAATTTACAAGATCCTCATCCAAACAGTTACTTGGATAACTGTGGAAAAGCCAGAGCTAATACATGCATTATGCCGGGACTGTTGGCCTCCGGGTCGGCGGAACTGGTGCACTTATTAGTTAAACCAATCGCCTCCGGGCGCTTTGAGTTGAAATCTGGATAAGGATGCCGATCGTACGATCGCTTGCGACTGACGACAGATCTTTCAAATGTCTGCCCTATCAACTATTGATGGTAGTGTAGAGGACTACCATGGTTGCGACGGGTAACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAATGGCTACCACATCCAAGGAAGGCAGCAGGCGCGTAAATTACCCAATCCCGGCACGGGGAGGTAGTGACGAGAAATAACAATATGGACCTCTCTAACGATGGTCCATAATTGGAATGAGTTGAGCATAAATCCTTTTGCAAGGATCAACGTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCACTAGCGTATATTCAACAGTTGTTGCGGTTAAAAACGTTCGAAGTTTGATACCCCCGTNNCCAGAACTCGCGTACCGTACGCGNGGAGCCCCGGACTTCTACGGTTTGGGGACCGGACCGGNGTACAGCGCTACNCGGGTGG] [+] EMBL BX469538 [GAATCGNGCACGAGGTCTACCAGTGATATACGCTCGTCTCAAAGGTTAAAGCCATGCATGTCTAAGTACAAGCTTCCTAGAAAGTGAAACCGCATAAGGCTCAGTATAACAGCTATAATTTACAAGATCCTCATCCAAACAGTTACTTGGATAACTGTGGAAAAGCCAGAGCTAATACATGCATTATGCCGGGACTGTTGGCCTCCGGGTCGGCGGAACTGGTGCACTTATTAGTTAAACCAATCGCCTCCGGGCGCTTTGAGTTGAAATCTGGATAAGGATGCCGATCGTACGATCGCTTGCGACTGACGACAGATCTTTCAAATGTCTGCCCTATCAACTATTGATGGTAGTGTAGAGGACTACCATGGTTGCGACGGGTAACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAATGGCTACCACATCCAAGGAAGGCAGCAGGCGCGTAAATTACCCAATCCCGGCACGGGGAGGTAGTGACGAGAAATAACAATATGGACCTCTCTAACGATGGTCCATAATTGGAATGAGTTGAGCATAAATCCTTTTGCAAGGATCAACGTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCACTAGCGTATATTCAACAGTTGTTGCGGTTAAAAACGTTCGAAGTTTGATACCCCCGTNNCCAGAACTCGCGTACCGTACGCGNGGAGCCCCGGACTTCTACGGTTTGGGGACCGGACCGGNGTACAGCGCTACNCGGGTGG] consensusID : consensus_9336#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 532 fasta sequence [ATGACTCGAGCAGAATCGCAGAGGNTTATTAAGACATTCTCGAAAGTTGAGCTCCAAGCAGGTGCGAGAGCAATCGATCTATCGTGCAGTAAAAGATCGACCAAAGCGCAGTGACAGTTGAACGGTACAGAACATGGCGCACAAACTAATATCGTGTAGTGCCTGTGTGCTGGTGGCGCTTTTCGTGCTGAGTGCAGTGAACGTATCAAGGGCAGGCGTCGCTTTCGCTACGGGTCCTGTCACGTGGTGAGCGATCCGTGTTTAACCAAACTGCACAGAACNAGAACGTGCGAAAGGTAACCACAACTTGTGGCATGGGCACGTTGTACAACGNCCCGCAACAAGGGGCGATCGACTAGCTTCACTGAAAAATACGTGTGACTGCGAGCAAGTTGAACGCNAGATGCGTCCGAACCGGACGACCATGTCCTCGATCAGGTGCGTACGTCTACCGGTGCCGGGAGCATCCGGGCAAGGCAAGTCCGTGCCCGGTCCTGAGCTGGTAACAAGCCGATCCGATCCGTNGTGCTTC] [+] EMBL AL696822 [ATGACTCGAGCAGAATCGCAGAGGNTTATTAAGACATTCTCGAAAGTTGAGCTCCAAGCAGGTGCGAGAGCAATCGATCTATCGTGCAGTAAAAGATCGACCAAAGCGCAGTGACAGTTGAACGGTACAGAACATGGCGCACAAACTAATATCGTGTAGTGCCTGTGTGCTGGTGGCGCTTTTCGTGCTGAGTGCAGTGAACGTATCAAGGGCAGGCGTCGCTTTCGCTACGGGTCCTGTCACGTGGTGAGCGATCCGTGTTTAACCAAACTGCACAGAACNAGAACGTGCGAAAGGTAACCACAACTTGTGGCATGGGCACGTTGTACAACGNCCCGCAACAAGGGGCGATCGACTAGCTTCACTGAAAAATACGTGTGACTGCGAGCAAGTTGAACGCNAGATGCGTCCGAACCGGACGACCATGTCCTCGATCAGGTGCGTACGTCTACCGGTGCCGGGAGCATCCGGGCAAGGCAAGTCCGTGCCCGGTCCTGAGCTGGTAACAAGCCGATCCGATCCGTNGTGCTTC] consensusID : consensus_9336#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 491 fasta sequence [AGATCCCCGAGGTTATCCAAGAAGTGTGCTGAACATTTCGGGAAGGATTTTTCCGAGCGTTTTTTCACGATAAAAATGTCGTACCTCGCACGCAAAGGACCTGCCGTCTACTCTGCCCTCGGCAAATGGGCCTACAATATGGCCGGATTCAACCAGTACGGTCTGCATCGCGACGATTGTCTGTATGAGAACGAGGACGTGAAGGAGGCGATCCGCGCCTGCCGGAGAAGCTGAAGGATGAGCGCAATTTCCGCATCACGCGCGCCCTCCACTGTCGATGACGAAAACGATCCTGCCGAAGGAACAGTGGACCAAGTACGAGGAGGACACCAAATACCTCGAGCCGTACCTGCAGGAGGTGGTCCGGGAGCGCGAGGAGAAGGTCAAGTGGGAATCGAACAAGTAAACCTTTAATTCGTGCGAGATGCGTTTCGAAACGAAGATATGCGCATTGTGCCGTGGCTGGTGGCGGTAACTCGACCGCGCGTTNA] [+] EMBL AL694972 [AGATCCCCGAGGTTATCCAAGAAGTGTGCTGAACATTTCGGGAAGGATTTTTCCGAGCGTTTTTTCACGATAAAAATGTCGTACCTCGCACGCAAAGGACCTGCCGTCTACTCTGCCCTCGGCAAATGGGCCTACAATATGGCCGGATTCAACCAGTACGGTCTGCATCGCGACGATTGTCTGTATGAGAACGAGGACGTGAAGGAGGCGATCCGCGCCTGCCGGAGAAGCTGAAGGATGAGCGCAATTTCCGCATCACGCGCGCCCTCCACTGTCGATGACGAAAACGATCCTGCCGAAGGAACAGTGGACCAAGTACGAGGAGGACACCAAATACCTCGAGCCGTACCTGCAGGAGGTGGTCCGGGAGCGCGAGGAGAAGGTCAAGTGGGAATCGAACAAGTAAACCTTTAATTCGTGCGAGATGCGTTTCGAAACGAAGATATGCGCATTGTGCCGTGGCTGGTGGCGGTAACTCGACCGCGCGTTNA] consensusID : consensus_9336#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 195 fasta sequence [ACACACCCCACCGAACCCGCGCACCCAGTGGCGGACGACAGCAACACGCGCAAAGACCCCCGGATAGCCGGGCTGAGCGCATCCAGAACCCCACGAAACCACGCCGATCAGCTTGCCAACAGCAACGAGCGGACCACCGGAGTCACCCGGGCAAGCGTCCATCCCACCCGGCGGGTATCCGGCACACAGCAAACG] [+] EMBL CNS09FNL [ACACACCCCACCGAACCCGCGCACCCAGTGGCGGACGACAGCAACACGCGCAAAGACCCCCGGATAGCCGGGCTGAGCGCATCCAGAACCCCACGAAACCACGCCGATCAGCTTGCCAACAGCAACGAGCGGACCACCGGAGTCACCCGGGCAAGCGTCCATCCCACCCGGCGGGTATCCGGCACACAGCAAACG] consensusID : consensus_9336#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 133 fasta sequence [CTTTATGTGAAATGAGATGGATGGAGCCTGCATCTATTTTCCTTCCTCTATCCTATCTCTATTTCATTTCTTCTCCCCCTCCGTCAACCGTCAAAATCATCATCTTTCTGTACTGTGCCCCCTGTACACACAT] [+] EMBL CNS09DXA [CTTTATGTGAAATGAGATGGATGGAGCCTGCATCTATTTTCCTTCCTCTATCCTATCTCTATTTCATTTCTTCTCCCCCTCCGTCAACCGTCAAAATCATCATCTTTCTGTACTGTGCCCCCTGTACACACAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9336#4 ------------------------------------------------------------ consensus_9336#5 ------------------------------------------------------------ consensus_9336#1 ------------------------------------------------------------ consensus_9336#0 TTTTTTTTTTTTTTTTTTTAAAGCGATCAACGTCATAATTATTTGCGCACGTTCTTTTGT 60 consensus_9336#2 ------------------------------------------------------------ consensus_9336#3 ------------------------------------------------------------ consensus_9336#4 ------------------------------------------------------------ consensus_9336#5 ------------------------------------------------------------ consensus_9336#1 ------------------------------------------------------------ consensus_9336#0 TTTTCTTCAAACCGATCGACGGACAGTCGGGGATGGTGTGTCGTCTGCTGATTGCCCCAT 120 consensus_9336#2 ------------------------------------------------------------ consensus_9336#3 ------------------------------------------------------------ consensus_9336#4 ------------------------------------------------------------ consensus_9336#5 ------------------------------------------------------------ consensus_9336#1 ------------------------------------------------------------ consensus_9336#0 TTTCAACACGATATATCAGCTGCCTTAAACCTTCTTTACAATCTGCACCACATCCTCATC 180 consensus_9336#2 ------------------------------------------------------------ consensus_9336#3 ------------------------------------------------------------ consensus_9336#4 ------------------------------------------------------------ consensus_9336#5 ------------------------------------------------------------ consensus_9336#1 ------------------------------------------------------------ consensus_9336#0 GTTCAGCACGTGATCGATACCGACCTTTTGCGGTTGATGCTTGACGGACGAACCCCACAC 240 consensus_9336#2 ------------------------------------------------------------ consensus_9336#3 ------------------------------------------------------------ consensus_9336#4 ------------------------------------------------------------ consensus_9336#5 ------------------------------------------------------------ consensus_9336#1 ------------------------------------------------------------ consensus_9336#0 AAGTGCATATTTAAATTCTTTCGCAATCGTTCGGTGAAGCTTGTTACAGAAACTTTCCAC 300 consensus_9336#2 ------------------------------------------------------------ consensus_9336#3 ------------------------------------------------------------ consensus_9336#4 ------------------------------------------------------------ consensus_9336#5 ------------------------------------------------------------ consensus_9336#1 ------------------------------------------------------------ consensus_9336#0 GGTAGTATGCTCGTGGTGCAGCACAATCGGTGAGCTGTAGTCCGGCAGCTGGCCCTTCGG 360 consensus_9336#2 ------------------------------------------------------------ consensus_9336#3 ------------------------------------------------------------ consensus_9336#4 ------------------------------------------------------------ consensus_9336#5 ------------------------------------------------------------ consensus_9336#1 ------------------------------------------------------------ consensus_9336#0 TTTGGTATAGATTCGCACCAGCTTCAGATACTGCCACATCATATCGAGCAAATCGTCAAA 420 consensus_9336#2 ------------------------------------------------------------ consensus_9336#3 ------------------------------------------------------------ consensus_9336#4 ------------------------------------------------------------ consensus_9336#5 ------------------------------------------------------------ consensus_9336#1 ------------------------------------------------------------ consensus_9336#0 GTTCCAGTGATGATGGGCAGAGATCGGTACGCAGTGCGGGATTTTATAGATGACGTCCAG 480 consensus_9336#2 ------------------------------------------------------------ consensus_9336#3 ------------------------------------------------------------ consensus_9336#4 ------------------------------------------------------------ consensus_9336#5 ------------------------------------------------------------ consensus_9336#1 ------------------------------------------------------------ consensus_9336#0 CTCCTCGATCGAAATCTGATCGATCTTGTTCAGCAGATAGATGCACGGGATGTAAATGCG 540 consensus_9336#2 ------------------------------------------------------------ consensus_9336#3 ------------------------------------------------------------ consensus_9336#4 ------------------------------------------------------------ consensus_9336#5 ------------------------------------------------------------ consensus_9336#1 -------------------------------------GAATCGNGCACGAGGTCTACCAG 23 consensus_9336#0 GTTGCCCTCGATCACGTCGATCAGATCGTCCGCCGTCGCATCGTACTTCAGCGTAATGTC 600 consensus_9336#2 ------------------------------------------------------------ consensus_9336#3 ------------------------------------------------------------ consensus_9336#4 ------------------------------------------------------------ consensus_9336#5 ------------------------------------------------------------ consensus_9336#1 TGATATACGCTCGTCTCAAAGGTTAAAGCCATGCATGTCTAAGTACAAGCTTCCTAGAAA 83 consensus_9336#0 CGCATTATGAATCTTGTACTCGCCCAGAATCGTCTTCACCGTGTCCAGGTCCAGCTCCGA 660 consensus_9336#2 ------------------------------------------------------------ consensus_9336#3 ------------------------------------------------------------ consensus_9336#4 ------------------------------------------------------------ consensus_9336#5 ------------------------------------------------------------ consensus_9336#1 GTGAAACCGCATAAGGCTCAGTATAACAGCTATAATTTACAAGATCCTCATCCAAACAGT 143 consensus_9336#0 CTGTGCTACGGTGGCGTTCAGGTTCACT-CCGCCCTTGTCCTTCCGGCGGTAGGAAATGT 719 consensus_9336#2 ------------------------------------------------------------ consensus_9336#3 ------------------------------------------------------------ consensus_9336#4 ------------------------------------------------------------ consensus_9336#5 ------------------------------------------------------------ consensus_9336#1 TACTTGGATAACTGTGGAAAAGCCAGAGCTAATACATGCATTATGCCGGGACTGTTGGCC 203 consensus_9336#0 TCGGCGGCTGCTTGTTCAGCCGCAGCCCGAACCCTTCCAACTCGTGCTCGAGCAGCTTCT 779 consensus_9336#2 ------------------------------------------------------------ consensus_9336#3 ------------------------------------------------------------ consensus_9336#4 ------------------------------------------------------------ consensus_9336#5 ------------------------------------------------------------ consensus_9336#1 TCCGGGTCGGCGGAACTGGTGCACTTATTAGTTAAACCAATCGCCTCCGGGCGCTTTGAG 263 consensus_9336#0 TGTGCGTGAGCGGTTTCAGCACGTCCAACACCATGAAAATCAGATTGCAGGTACGTGCCA 839 consensus_9336#2 ----------------------ATGACTCGAGCAGAATCGCAGAGGNTTATTAAGACATT 38 consensus_9336#3 ------------------------------------------------------------ consensus_9336#4 ------------------------------------------------------------ consensus_9336#5 ------------------------------------------------------------ consensus_9336#1 TTGAAATCTGGATAAGGATGCCGATCGTACGATCGCTTGCGACTGACGACAGATCTTTCA 323 consensus_9336#0 CCGCAATTACCTGCCGACCGCGACCCTTACCATCCTTCGCACCTTCGATGATTCCGGGCA 899 consensus_9336#2 CTCGAAAGTTGAGCTCCAAGCAGGTGCGAGAGCAATCGATCTATCGTGCAGTAAAAGATC 98 consensus_9336#3 -----------AGATCCCCGAGGTTATCCAAGAAGTGTGCTGAACATTTCGGGAAGGATT 49 consensus_9336#4 ------------------------------------------------------------ consensus_9336#5 ------------------------------------------------------------ consensus_9336#1 AATGTCTGCCCTATCAACTATTGATGGTAGTGTAGAGGACTACCATGGTTGCGACGGGTA 383 consensus_9336#0 AATCCAGCAGCTGTATCTTGGCGCCCTTGTACTTGATACAGCCCGGCACGGTCGTCAGCG 959 consensus_9336#2 GACCAAAGCGCAGTGACAGTTGAACGGTACAGAACATGGCGCACAAACTAATATCGTGTA 158 consensus_9336#3 TTTCCGAGCGTTTTTTCACGATAAAAATGTCGTACCTCGCACGCAAAGGACCTGCCGTCT 109 consensus_9336#4 ------------------------------------------------------------ consensus_9336#5 ------------------------------------------------------------ consensus_9336#1 ACGGGGAATCAGGGTTCGATTCCGGAGAG-GGAGCCTGAGAAATGGCTACCACATCCA-- 440 consensus_9336#0 TGGTGAACTCGTATGCAGCCACCTCCGAGTAGACACCGGCCAGATTGGACAGCAGGGT-- 1017 consensus_9336#2 GTGCCTGTGTGCTGGTGGCGCTTTTCGTGCTGAGTGCAGTGAACG--TATCAAGGGCA-- 214 consensus_9336#3 ACTCTGCCCTCGGCAAATGGGCCTACAATATGGCCGGATTCAACCAGTACGGTCTGCATC 169 consensus_9336#4 ------------------------------------------------------------ consensus_9336#5 ------------------------------------------------------------ consensus_9336#1 AGGAAGGCAGCAGGCGCGTAAATTACCCAATCCCGGCACGGGGAGGTAGTGACGAGAAAT 500 consensus_9336#0 CGATTTGCCTACCGAGGGAAACCCAACAAAGCCGACCCGGGCGTCACCGGTTTTGGAAAC 1077 consensus_9336#2 GGCGTCGCTTTCGCTACGGGTCCTGTCACGTGGTGAGCGATCCGTGTTTAACCAAACTGC 274 consensus_9336#3 GCGACGATTGTCTGTATGAGAACGAGGACGTGAAGGAGGCGATCCGCGCCTGCCGGAGAA 229 consensus_9336#4 ----ACACA-CCCCACCGAACCCGCGCACCCAGTGGCGGACGACAGCAACACGCGCAAAG 55 consensus_9336#5 ------------------------------------------------------------ consensus_9336#1 AACAATATG-GACCTCTCTAACGATGGTCCATAATTGGAATGAGTTGAGCATAAATCCTT 559 consensus_9336#0 TTCGAAACC-CTGTTCCGATGCACCGCCGCCACCCTTGGGAGTGATGAGCTCGCGCCGCA 1136 consensus_9336#2 ACAGAACNA-GAACGTGCGAAAGGTAACCACAACTTGTGGCATGGGCACGTTGTACAACG 333 consensus_9336#3 GCTGAAGGATGAGCGCAATTTCCGCATCACGCGCGCCCTCCACTGTCGATGACGAAAACG 289 consensus_9336#4 ACCCCCGGATAGCCGGGCTGAGCGCATC---CAGAA--CCCCACGAAACCACG-CCGATC 109 consensus_9336#5 -CTTTATGTGAAATGAGATGGATGGAGC---CTGCA--TCT-ATTTTCCTTCC-TCTATC 52 consensus_9336#1 TTGCAAGGATCAACGTGGAGGGCAAGTC---TGGTG--CCA---GCAGCCGCG-GTAATT 610 consensus_9336#0 GCTTGGCCAACCGTGCCTTCAGCAAGCC---CAAATGTCCCGCCGTAGCCTTG-TTACGT 1192 consensus_9336#2 NCCCGCAACAAGGGGCGATCGACTAGCTTCACTGAAAAATACGTGTGACTGCGAGCAAGT 393 consensus_9336#3 ATCCTGCCGAAGGAACAGTGGACCAAGTACGAGGAGGACACCAAATACCTCGAGCCGTAC 349 * consensus_9336#4 AGCTTGCCAACAGC---AACGAGCGGACCACCGGAGTCACC---CGGGCAAGCGTCCATC 163 consensus_9336#5 CTATCTCTATT--T---CATTTCTTCTCCCCCTCCGTCAAC---CGTCAAAATCATCATC 104 consensus_9336#1 CCAGCTCCACTAGCGTATATTCAACAGTTGTTGCGGTTAAAAA-CGTTCGAAGTTTGATA 669 consensus_9336#0 TGGGTACGAGCCAT--CTCCGACTCGATTTGAGCAATCTTTTC-CAGAATCGTACTCATC 1249 consensus_9336#2 TGAACGCNAGATGCG--TCCGAACCGGACGACCATGTCCTC----GATCAGGTGCGTACG 447 consensus_9336#3 CTGCAGGAGGTGGTC--CGGGAGCGCGAGGAGAAGGTCAAGTGGGAATCGAACAAGTAAA 407 * * consensus_9336#4 CCACCCGGCGG-GTA----TCCGGCACACAGCAAACG----------------------- 195 consensus_9336#5 TTTCTGTACTGTGCC----CCCTGTACACA-CAT-------------------------- 133 consensus_9336#1 CCCCCGTNNCCAGAA----CTC-GCGTACCGTACGCGNGGAGCCCCGGACTTCTACGGTT 724 consensus_9336#0 TTGCACGCTCTTGCAGCAGCTCGGAGTAGGTCAAATAATTGAACGAACGAGATAAATCAT 1309 consensus_9336#2 TCTACCGGTGCCGGGAGCATCC-GGGCAAGGCAAGTCCGTG--CCCGGTCCTGAGCTGGT 504 consensus_9336#3 CCTTTAATTCGTGCGAG-ATGCGTTTCGAAACGAAGATATGCGCATTGTGCCGTGGCTGG 466 * * consensus_9336#4 --------------------------------------------------- consensus_9336#5 --------------------------------------------------- consensus_9336#1 TGGGGACCGGACCGGNGTACAGCGCTACNCGGGTGG--------------- 760 consensus_9336#0 AGATAGAAGTGGCACGCAGCAGCACACAAATTCTGTCGGACGCGTGGGCGG 1360 consensus_9336#2 AACAAGCCGATCCGATCCGTNGTGCTTC----------------------- 532 consensus_9336#3 TGGCGGTAACTCGACCGCGCGTTNA-------------------------- 491 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||