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Anopheles gambiae
cluster # 9346 cluster # 9346       Sequences # 16       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9346#0 length = 1762 sequences # 13  
consensus_9346#1 length = 650 sequences # 2  
consensus_9346#2 length = 424 sequences # 1  

consensusID : consensus_9346#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1762
fasta sequence
                              [CCGCGGACGCGTGGGTTCAGCGCTTGCTTTCCCTCGTTTTTCTGCGAGGAAAACAAAGTCACGGTTTCCGCCGGGAAATCTAAATTTCCCGTCCTTGTGTGTGCACCGTGTTCCGACCTCCGCCTGCCCGCCGCTCGCCAAGATGTCCGGGTTTTCATTCGGCACCCCAACAACATCGGCTCCCGCCTTTTCCTTCGGTACGCCAGCGGCAGCAACGACAAGCATCGCGGCAGCCGCCCCACTAGCAACGGCAGCAGCGGCAGCGGCACCAGCGACGGGATTTTCCTTCGGAGCCCCGGCCACCGCAACAACGACGACAGCACCCACGGCCACCGGGTTTAGCTTCGGCAAACCGGCCGCAA-CCACAGCAACGG-CAGCCGCCCCACTATCGTTCGGCCTCGGAGCTACCTCCACCGCGGCAACCCCGTTCGGTGCCGGGCTGAGCGTATCGGCCGGAACCACAGCCACCGCCACCACGACGTCAACGTTTGCCGTACCCACGCTAAACTTCGGAACTGCTGCAACCGC-AAC-GGCCGGTGGTGCTACCGGGACGCTTGGGCTTGGAAATGCCGGCGGCGGTCTTTTCGGTGCTGCCAAAGCGACAACCACCGTAGCCACACTGGCAGCAGCTCCTGCCACCACCACCACCGCCGCCGCCGCCCCCGCCACGGTTGGGCTGGGCGGCG-TTGACATAAACGCCAACCAGCCCAAATCGGTCGAGGGCAAGAGCGACAACACGAAGGCGAAGGAATCGCAAGTGCCGCAGAAATCATCAGCACCGTGGAGCACCTAAAGGAGTACATCAAGAGCCTGAACAGCACGCTCGCCGAGCTGTCGAACAGCGTGAGCAACAACCAGAACGCGATCAAGATGCTGCGCCACGAAACGTCCGGCATTACGCGCCAGGCCGATATGGCGCA-CGCACGCAGGAAACGCCGGCCGGGCTGCAGTTCGAGAACACGCTGCCGCTGCAGTACTTCATCGAGCTGATCCAGAA---GTACG-AATCGGACCTGATCAACCTGAAGCAGCAGGTCGAGCTGACGGAGAAGCACATGAACTCGCTCACCACGCCGCAGTACTTTACGCCCCAGGATCTGAAGCTCTGCCTGCAGCAGATCTACGAAAGCTTCGTGGCCCTGGCCGGCCGCCTGCACGAGCTGCACCAGA-AGGTGGAAACGCAGAAGGAACAGTATCTCAACCTGCGACGCTACCTGCTGCGCGACAATACGGACGTGTTCGAGGGTGGCGAGGGCGCGAAGGAGGGCAGCAGTGCGGTGGACAAATTTGCCCTCAACATCTCATCCGGCCCGACCCCGTTCTCGACGGTGATGGGCGGTAACGTGAGTTTCGGCGTTTCGTTGAGACAAACCGGTGCCGGAACGTCGCTGTGGTCGGGCGCAGGGACGGGTTTGGCGGGTGCCGACCA-GGGCAAGGGTGCTCCGTTCGGGCAGACGAACTTTTTCGGCATGAACGCGGGCGGCAGTGGTGTGGCGGGTGGTAGCGATGCGTTCGGAAATCGGTTAGGGTTTGGTTTTGGCTCGACGGCAACGACCGGAGCGGATGCGTTCAATCTGCAGAAGCCACCGAT-AGGGAGCAAAAGGAATAAGTTGTAAT-AA-TAAAGAGTGTAATTTGGA-GAAACCTTTGAGAACGTGTATGAC-GAACAGA-TACAATCA-CGAGTTTAGGTCG---TTTTAATTGGGTT-ACTTCCCGAAATTCGTGAAAAAAAG--TGTTCAGGTTAAGGTCGGTAATTCTAGCCAAGGTTTTG]

[+] EMBL BM601534             [CCGCGGACGCGTGGGTTCAGCGCTTGCTTTCCCTCGTTTTTCTGCGAGGAAAACAAAGTCACGGTTTCCGCCGGGAAATCTAAATTTCCCGTCCTTGTGTGTGCACCGTGTTCCGACCTCCGCCTGCCCGCCGCTCGCCAAGATGTCCGGGTTTTCATTCGGCACCCCAACAACATCGGCTCCCGCCTTTTCCTTCGGTACGCCAGCGGCAGCAACGACAAGCATCGCGGCAGCCGCCCCACTAGCAACGGCAGCAGCGGCAGCGGCACCAGCGACGGGATTTTCCTTCGGAGCCCCGGCCACCGCAACAACGACGACAGCACCCACGGCCACCGGGTTTAGCTTCGGCAAACCGGCCGCAA CCACAGCAACGG CAGCCGCCCCACTATCGTTCGGCCTCGGAGCTACCTCCACCGCGGCAACCCCGTTCGGTGCCGGGCTGAGCGTATCGGCCGGAACCACAGCCACCGCCACCACGACGTCAACGTTTGCCGTACCCACGCTAAACTTCGGAACTGCTGCAACCGCAAACGGGCCGGTGGTGCTACCGGGACGCTCGGGCTTGGAATGGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM636181             [                               CCGCGTTTTTCTGCGAGGAAAACAAAGTCACGGTTTCCGCCGGGAAATCTAAATTTCCCGTCCTTGTGTGTGCACCGTGTTCCGACCTCCGCCTGCCCGCCGCTCGCCAAGATGTCCGGGTTTTCATTCGGCACCCCAACAACATCGGCTCCCGCCTTTTCCTTCGGTACGCCAGCGGCAGCAACGACAAGCATCGCGGCAGCCGCCCCACTAGCAACGGCAGCAGCGGCAGCGGCACCAGCGACGGGATTTTCCTTCGGAGCCCCGGCCACCGCAACAACGACGACAGCACCCACGGCCACCGGGTTTAGCTTCGGCAAACCGGCCGCAA CCACAGCAACGG CAGCCGCCCCACTATCGTTCGGCCTCGGAGCTACCTCCACCGCGGCAACCCCGTTCGGTGCCGGGCTGAGCGTATCGGCCGGAACCACAGCCACCGCCACCACGACGTCAACGTTTGCCGTACCCACGCTAAACTTCGGAACTGCTGCAACCGC AAC GGCCGGTGGTGCTACCGGGACGCTCGGGCTTGGAAATGCCGGCGGCGGTCTTTTCGGTGCTGCCAAAGCGACAACCACCGTAGCCACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM586135             [                                            ccgGGAAAACAAACTCACGGTTTCCGCCGGGAAATCTAAATTTCCCGTCCTTGTGTGTGCACCGTGTTCCGACCTCCGCCTGCCCGCCGCTCACCAAGATGTCCGGGTTTTCATTCGGCACCCCAACAACATCGGCTCCCGCCTTTTCCTTCGGTACGCCAGCGGCAGCAACGACAAGCATCGCAGCAGCCGCCCCACTAGCAACGGCAGCAGCGGCAGCGGCACCAGCGACGGGATTTTCCTTCGGAGCCCCGGCCACCGCAACAACGACGACAGCACCCACGGCCACCGGGTTTAGCTTCGGCAAACCGGCCGCAA CCACAGCAACGG CAGCCGCCCCACTATCGTTCGGCCTCGGAGCTACCTCCACCGCAGCAACCCCGTTCGGTGCCGGGCTGAGCGTATCGGCCGGAACCACAGCCACCGCCACCACGACGTCAACGTTTGCCGTACCTACGCTAAACTTCGGAACTGCTGCAACCGC AAC GGCCGGTGGTGCTACCGGGACGCTTGGGCTTGGAAATGCCGGCGGCGGTCTTTTCGGTGCTGCCAAAGCGACAACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM593751             [                                            ccgGGAAAACAAACTCACGGTTTCTGCCGGGAAATCTAAATTTCCCGTCCTTGTGTGTGCACCGTGTTCCGACCTCCGCCTGCCCACCGCTCGCCAAGATGTCCGGGTTTTCTTTCGGCACCCCAACAACATCGGCTCCCGCCTTTTCCTTCGGTACGCCAGCGGCAGCAACGACAAGCATCGCGGCAGCCGCCCCACTAGCAACGGCAGCAGCGGCAGCGGCACCAGCGACGGGATTTTCCTTCGGAGCCCCGGCCACCGCAACAACGACGACAGCACCCACGGCCACCGGGTTTAGCTTCGGCAAACCGGCCGCAA CCACAGCAACGG CAGCCGCCCCACTATCGTTCGGCCTTGGAGCTACCTCCACCGCGGCAACTCCGTTCGGTGCCGGGCTGAGCGTATCGGCCGGAACCACAGCCACCGCCACCACGACGTCAACGTTTGCCGTACCCACGCTAAACTTCGGAACTGCTGCAACCGC AAC GGCCGGTGGTGCTACCGGGACGCTCGGGCTTGGAAATGCCGGCGGCGGTCTTTTCGGTGCTGCCAAAGCAACAACCACCGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM612872             [                                                                  TCCGCCGGGAAATCTAAATTTCCCGTCCTTGTGTGTGCACCGTGTTCCGACCTCCGCCTGCCCGCCGCTCGCCAAAATGTCCGGGTTTTCATTCGGCACCCCAACAACATCGGCTCCCGCCTTTTCCTTCGGTACGCCAGCGGCAGCAACGACAAGCATCGCGGCAGCCGCCCCACTAGCAACGGCAGTATTTTTAGCGGCACCAGCGACGGGATTTTCCTTCGGAGCCCCGGCCACCGCAACAACGACGACAGCACCCACGGCCACCGGGTTTAGCTTCGGCAAACCGGCCGCAA CCACAGCAACGG CAGCCGCCCCACTATCGTTCGGCCTCGGAGCTACCTCCACCGCGGCAACCCCGTTCGGTGCCGGGCTGAGCGTATCGGCCGGAACCACAGCCACCGCCACCACGACGTCAACGTTTGCCGTACCTACGCTAAACTTCGGAACTGCTGCAACCGC AAC GGCCGGTGGTGCTACCGGGACGCTTGGGCTTGGAAATGCCGGCGGCGGTCTTTTCGGTGCGGGCAAAGCGACAACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS098N1             [                                                                      CCGGGAAATCTAAATTTCCCGTCCTTGTGTCTGCACCGTGTTCCGACCTCCGCCTGCCCGCCGCTCGCCAAGATGTCCGGGTTTTCATTCGGCACCCCAACAACATCGGCTCCCGCCTTTTCCTTCGGTACGCCAGCGGCAGCAACGACAAGCATCGCGGCAGCCGCCCCACTAGCAACGGCAGCAGCGGCAACGGCACCAGCGACGGGATTTTCCTTCGGAGCCCCGGCCACCGCAACAACGACGACAGCACCCACGGCCACCGGGTTTAGCTTCGGCAAACCGGCCGCAACCCACAGCAACGGCCAGCCGCCCCACTATCGTTCGGCCCCGGAGCTACCTCCACCGCGGCAACCCCGTTCGGTGCCGGGCTGAGCGTATCGGCCGGAACCACAGCCACCGCCACCACGACGTCAACGTTTGCGGTACCCACGCTAAACTTCGGAACTGCTGCAACCGC AAC GGCTGGTGGTGCTACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CNS09FI2             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GC AAC GGCCGGTGGTGCTACCGGGACGCTTGGGCTTGGAAATGCCGGCGGCGGTCTTTTCGGTGCGGCCAAAGCGACAACCACCGTAGCCACACTGGCAGCAGCTCCTGCCACCACCACCACCGCCGCCGCCGCCCCCGCCACGGTTGGGCTGGGCGGCG TTGACATAAACGCCAACCAGCCCAAATCGGTCGAGGGCAAGAGCGACAACACGAAGGCGAAGGAATCGCAAGTGCCGCAGAAATCATCAGCACCGTGGAGCACCTAAAGGAGTACATCAAGAGCCTGAACAGCACGCTCGCCGAGCTGTCGAACAGCGTGAGCAACAACCAGAACGCGATCAAGATGCTGCGCCACGAAACGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CNS09FX9             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 C AAC GGCCGGTGGTGCTACCGGGACGCTTGGGCTTGGAAATGCCGGCGGCGGTCTTTTCGGTGCGGCCAAAGCGACAACCACCGTAGCCACACTGGCAGCAGCTCCTGCCACCACCACCACCGCCGCCGCCGCCCCCGCCACGGTTGGGCTGGGCGGCGATTGACATAAACGCCAACCAGCCCAAATCGGTCGAGGGCAAGAGCGACAACACGAAGGCGAAGGAATCGCAAGTGCCGCAGAAATCATCAGCACCGTGGAGCACCTAAAGGAGTACATCAAGAGCCTGAACAGCACGCTCGCCGAGCTGTCGAACAGCGTGAGCAACAACCAGAACGCGATCAAGATGCTGCGCCACGAAACGTCCGGCATTACGCGCCAGGCCGATATGGCGCA CGCACGCAGGAAACGCCGGCCGGGCTGCAGTTCGAGAACACGCTGCCGCTGCAGTACTTCATCGAGCTGATCCAGAA   GTACG AATCGGACCTGATCAACCTGAAGCAGCAGGTCGAGCTGACGGAGAAGCACATGAACTCGCTCACCACGCCGCAGTACTTTACGCCCCAGGATCTGAAGCTCTGCCTGCAGCAGATCTACGAAAGCTTCGTGGCCCTGGCCGGCCGCCTGCACGAGCTGCACCAGATTGGTGGAAACGCAGAAGGAACAGTATCTCAACCTGCGACGCTGCCTGCTACGCGACAATACGGACGTGTTCGAGGGTGGCGAGGGCGCGAAGGAGGGCAGCAGTTCGGTGGACAAATTTGCCCTCAACATCTCATCCGGCCCGACCCCGTTCTCGACGGTGATGGGCGGTAACGTGAGTTTCGGCGTTTCGTTGAGA                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM580478             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ccgGCTCGCCGAGCTGTCGAACAGCGTGAGTAACAACCAGAACGCGATCAAGATGCTGCGCCACGAAACGTCCGGCATTACGCGCCAGGCCGATATGGCGCAGCGCACGCAGGAAACGCCGGCCGGGCTGCAGTTCGAGAACACGCTGCCGCTGCAGTACTTCATCGAGCTGATCCAGAA   GTACG AATCGGACCTGATCAACCTGAAGCAGCAGGTCGAGCTGACGGAGAAGCACATGAACTCGCTCACCACGCCGCAGTACTTTACGCCCCAGGATCTGAAGCTCTGCCTGCAGCAGATCTACGAAAGCTTCGTGGCCCTGGCCGGCCGCCTGCACGAGCTGCACCAGA AGGTGGAAACGCAGAAGGAACAGTATCTCAACCTGCGACGCTACCTGCTGCGCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX467852             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ggCCAGAATCGGCACGTAGGCGGA CTGATC ACCTGAAGCAGCAGGTCGAGCTGACGGAGAAGCACATGAACTCGCTCACCACGCCGCAGTACTTTACGCCCCAGGATCTGAAGCTCTGCCTGCAGCAGATCTACGAAAGCTTCGTGGCCCTGGCTGGCCGGCTGCACGAGCTGCACCAGA AGGTAGAAACGCAGAAGGAACAGTATCTCAACCTGCGACGCTACCTGCTGCGCGACAATACGGACGTGTTCGAGGGTGGCGAGGGCGCGAAGGAGGGAAGCAGTGCGGTGGACAAATTTGCCCTCAACATCTCATCCGGCCCGACCCCGTTCTCGACGGTGATGGGCGGTAACGTGAGTTTCGGCGTTTCGTTGAGACAAACCGGTGCCGGAACGTCGCTGTGGTCGGGCGCAGGGACGGGTTTGGCGGGTGCCGACCAGGGGCAAGGGTGCTCCGTTCGGGCAGACGAACTTTTTCGGCATGAACGCGGGCGGCAGTGGTGTGGCGGGTGGTAGCGATGCGTTCGGAAATCGGTTAGGGTTTGGTTTTGGCTCGACGGCAACGACCGGAGCGGATGCGTTCAATCTGCAGAAGCCACCGATAAGGGAGCAAAAGGAATAAGTTGTAAT AACTAAAGAGTGTAATTTGGAGGAAACCTTTGAGAACGTGTATGACGGAACAGA TACAATCA CGAGTTTAGGTCGGTTTTTTAATTGGGTTAACTTCCCGAAATTCGTGAAAAAAAG  TGTTCAGGTTAAGGTCGGTAATTCTAGCCAAGGTTTTG]
[+] EMBL BX467738             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    gCCAGAATCGGCACG AGGCGGA CTGATCAACCTGAAGCAGCAGGTCGAGCTGACGGAGAAGCACATGAACTCGCTCACCACGCCGCAGTACTTTACGCCCCAGGATCTGAAGCTCTGCCTGCAGCAGATCTACGAAAGCTTCGTGGCCCTGGCTGGCCGGCTGCACGAGCTGCACCAGA AGGTAGAAACGCAGAAGGAACAGTATCTCAACCTGCGACGCTACCTGCTGCGCGACAATACGGACGTGTTCGAGGGTGGCGAGGGCGCGAAGGAGGGAAGCAGTGCGGTGGACAAATTTGCCCTCAACATCTCATCCGGCCCGACCCCGTTCTCGACGGTGATGGGCGGTAACGTGAGTTTCGGCGTTTCGTTGAGACAAACCGGTGCCGGAACGTCGCTGTGGTCGGGCGCAGGGACGGGTTTGGCGGGTGCCGACCA GGGCAAGGGTGCTCCGTTCGGGCAGACGAACTTTTTCGGCATGAACGCGGGCGGCAGTGGTGTGGCGGGTGGTAGCGATGCGTTCGGAAATCGGTTAGGGTTTGGTTTTGGCTCGACGGCAACGACCGGAGCGGATGCGTTCAATCTGCAGAAGCCACCGAT AGGGAGCAAAAGGAATAAGTTGTAATAAA TAAAGAGTGTAATTTGGA GAAACCTTTGAGAACGTGTATGAC GAACAGATTAANATCAGGGAGGTTAGGTCG   TTTAACTTGGGTT ACTTCCGAAAATTCGTGAAAAAAAGGTTGTCCAGGT                             ]
[+] EMBL BX612487             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CCGCCGGCACGAGCTGCACCAGA AGGGGGAAACGCAGAAGGAACAGTATCTCAACCGGCGACGCTACCGGCTGCGCGACAATACGGACGGGTTCGAGGGTGGCGAGGGCGCGAAGGAGGGCAGCAGGGCGGTGGACAAATTTGCCCTCAACATCTCATCCGGCCCGACCCCGTTCTCGACGGGGATGGGCGGTAACGTGAGTTTCGGCGTTTCGTTGAGACAAACCGGGGCCGGAACGTCGCTGTGGTCGGGCGCAGGGACGGGTTTGGCGGGGGCCGACCA GGGCAAGGGGGCTCCGTTCGGGCAGACGAACTTTTTCGGCATGAAC                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CNS098N2             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GGCCCGACCCCGTTCTCGACGGTGATGGGCGGTTACGTGAGTTTCGGTGTTTCGTTGAGACAAACCGGTGCCGGGACGTCGCTGTGGTCGGGCGC GGGACGGGTTTGGCCGGTGCCGACCA GGGCAAGGGTGCTCCGTTCGGGCAGACGAACTTTTTCGGCATGAACGCGGGCGGCAGTGGTGTGGCGGGTGGCAACGATGCGTTCGGAAATCGGTTAGGGTTTGGTTTTGGGTCGACGGCAACGACCGGAGCGGATGCGTTCAATCTGCAGAAACCGCCGAT AGGGAGCAAAAGGAATAAGTTGTAAT AA TAAAGAGTGTAATTTGGA GAAACCTTTGAGAACGT                                                                                                                        ]


>consensus_9346#0 CCGCGGACGCGTGGGTTCAGCGCTTGCTTTCCCTCGTTTTTCTGCGAGGAAAACAAAGTC ACGGTTTCCGCCGGGAAATCTAAATTTCCCGTCCTTGTGTGTGCACCGTGTTCCGACCTC CGCCTGCCCGCCGCTCGCCAAGATGTCCGGGTTTTCATTCGGCACCCCAACAACATCGGC TCCCGCCTTTTCCTTCGGTACGCCAGCGGCAGCAACGACAAGCATCGCGGCAGCCGCCCC ACTAGCAACGGCAGCAGCGGCAGCGGCACCAGCGACGGGATTTTCCTTCGGAGCCCCGGC CACCGCAACAACGACGACAGCACCCACGGCCACCGGGTTTAGCTTCGGCAAACCGGCCGC AACCACAGCAACGGCAGCCGCCCCACTATCGTTCGGCCTCGGAGCTACCTCCACCGCGGC AACCCCGTTCGGTGCCGGGCTGAGCGTATCGGCCGGAACCACAGCCACCGCCACCACGAC GTCAACGTTTGCCGTACCCACGCTAAACTTCGGAACTGCTGCAACCGCAACGGCCGGTGG TGCTACCGGGACGCTTGGGCTTGGAAATGCCGGCGGCGGTCTTTTCGGTGCTGCCAAAGC GACAACCACCGTAGCCACACTGGCAGCAGCTCCTGCCACCACCACCACCGCCGCCGCCGC CCCCGCCACGGTTGGGCTGGGCGGCGTTGACATAAACGCCAACCAGCCCAAATCGGTCGA GGGCAAGAGCGACAACACGAAGGCGAAGGAATCGCAAGTGCCGCAGAAATCATCAGCACC GTGGAGCACCTAAAGGAGTACATCAAGAGCCTGAACAGCACGCTCGCCGAGCTGTCGAAC AGCGTGAGCAACAACCAGAACGCGATCAAGATGCTGCGCCACGAAACGTCCGGCATTACG CGCCAGGCCGATATGGCGCACGCACGCAGGAAACGCCGGCCGGGCTGCAGTTCGAGAACA CGCTGCCGCTGCAGTACTTCATCGAGCTGATCCAGAAGTACGAATCGGACCTGATCAACC TGAAGCAGCAGGTCGAGCTGACGGAGAAGCACATGAACTCGCTCACCACGCCGCAGTACT TTACGCCCCAGGATCTGAAGCTCTGCCTGCAGCAGATCTACGAAAGCTTCGTGGCCCTGG CCGGCCGCCTGCACGAGCTGCACCAGAAGGTGGAAACGCAGAAGGAACAGTATCTCAACC TGCGACGCTACCTGCTGCGCGACAATACGGACGTGTTCGAGGGTGGCGAGGGCGCGAAGG AGGGCAGCAGTGCGGTGGACAAATTTGCCCTCAACATCTCATCCGGCCCGACCCCGTTCT CGACGGTGATGGGCGGTAACGTGAGTTTCGGCGTTTCGTTGAGACAAACCGGTGCCGGAA CGTCGCTGTGGTCGGGCGCAGGGACGGGTTTGGCGGGTGCCGACCAGGGCAAGGGTGCTC CGTTCGGGCAGACGAACTTTTTCGGCATGAACGCGGGCGGCAGTGGTGTGGCGGGTGGTA GCGATGCGTTCGGAAATCGGTTAGGGTTTGGTTTTGGCTCGACGGCAACGACCGGAGCGG ATGCGTTCAATCTGCAGAAGCCACCGATAGGGAGCAAAAGGAATAAGTTGTAATAATAAA GAGTGTAATTTGGAGAAACCTTTGAGAACGTGTATGACGAACAGATACAATCACGAGTTT AGGTCGTTTTAATTGGGTTACTTCCCGAAATTCGTGAAAAAAAGTGTTCAGGTTAAGGTC GGTAATTCTAGCCAAGGTTTTG



consensusID : consensus_9346#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 650
fasta sequence
                              [GAATCGCCCGAGGTNAACGTGTCGAGCGAAATTAGAGCCTGAACAGCACGCTCGCCGAGCTGTCGAACAGCGTAAGCAACAACCAGAACGCGATCAAGATGCTGCGTCACGAAACGTCCGGCATTACGCGCCAGGCCGATATGGCGCAGCGCACGCAGGAAACGCCGGCCGGGCTG-CAGTTCGAGAACACGCTGCCGCTGCAGTACTTCATCGAGCTGATCCAGAAGTACGAATCGGACCTGATCAACCTGAAGCAGCAGGTCGAGCTGACCGAGAAGCACATGAACTCGCTCACCACGCCGCAGTACTTTACGCCCCAGGATCTGAAGCTCTGCCTGCAGCAGATCTACGAAAGCTTCGTGGCCCTGGCCGGCCGCCTGCACGAGCTGCACCAGAAGGTGGAAACGCAGAAGGAACAGTATCTCAACCTGCGACGCTACCTGCTGCGCGACAAAACGGACGTGTTCGAGGGTGGCGGGGGCGCGAAGGAGGGCAGCAGTGCGGTGGACAAATTTGCCCTCAACATTTCATCCGGCCCGACCCCGTTCTCGACGGTGATGGGCGGTTACGTGAGTTTCGGCGTTTCGTTGAGACAAACCGGCGGGGATGCGTTCATTCTGCAGAAGCCACCGATAGGGAGCAAAAGGAAT]

[+] EMBL AL934693             [GAATCGCCCGAGGTNAACGTGTCGAGCGAAATTAGAGCCTGAACAGCACGCTCGCCGAGCTGTCGAACAGCGTAAGCAACAACCAGAACGCGATCAAGATGCTGCGTCACGAAACGTCCGGCATTACGCGCCAGGCCGATATGGCGCAGCGCACGCAGGAAACGCCGGCCGGGCTG CAGTTCGAGAACACGCTGCCGCTGCAGTACTTCATCGAGCTGATCCAGAAGTACGAATCGGACCTGATCAACCTGAAGCAGCAGGTCGAGCTGACCGAGAAGCACATGAACTCGCTCACCACGCCGCAGTACTTTACGCCCCAGGATCTGAAGCTCTGCCTGCAGCAGATCTACGAAAGCTTCGTGGCCCTGGCCGGCCGCCTGCACGAGCTGCACCAGAAGGTGGAAACGCAGAAGGAACAGTATCTCAACCTGCGACGCTACCTGCTGCGCGACA                                                                                                                                                                                                     ]
[-] EMBL CNS09FXA             [                                                                                                             CGAAACGTCCGGCTTTACGCGCCAGGCCGTTTTGGCGCGGCGCACGCAGGAAACGCCGGCCGGGCTGCCAGTTCGAGGACAAGCTGCCGCTGCAGAACTTCATCGAGCTGATCCAGAAGTACGAATCGGACCTGTTCAACCTGAAGCAGCAGGTCGGGCTGACGGAAAAGGACATGGACTCGCTCACCACGCCGCAGTACTTTACGCCCCAGGGTTTGAAGTTCTGCCTGCAGCAGATCTACGAAAGCTTCGTGGCCCTGGCCGGCCGCCTGCACGGGCTGCACCAGAAGGTGGAAACGCAGAAGGGACAGTTTCTCAACCTGCGACGCTGCCT CTACGCGACAAAACGGACGTGTTCGAGGGTGGCGGGGGCGCGAAGGAGGGCAGCAGTGCGGTGGACAAATTTGCCCTCAACATTTCATCCGGCCCGACCCCGTTCTCGACGGTGATGGGCGGTTACGTGAGTTTCGGCGTTTCGTTGAGACAAACCGGCGGGGATGCGTTCATTCTGCAGAAGCCACCGATAGGGAGCAAAAGGAAT]


>consensus_9346#1 GAATCGCCCGAGGTNAACGTGTCGAGCGAAATTAGAGCCTGAACAGCACGCTCGCCGAGC TGTCGAACAGCGTAAGCAACAACCAGAACGCGATCAAGATGCTGCGTCACGAAACGTCCG GCATTACGCGCCAGGCCGATATGGCGCAGCGCACGCAGGAAACGCCGGCCGGGCTGCAGT TCGAGAACACGCTGCCGCTGCAGTACTTCATCGAGCTGATCCAGAAGTACGAATCGGACC TGATCAACCTGAAGCAGCAGGTCGAGCTGACCGAGAAGCACATGAACTCGCTCACCACGC CGCAGTACTTTACGCCCCAGGATCTGAAGCTCTGCCTGCAGCAGATCTACGAAAGCTTCG TGGCCCTGGCCGGCCGCCTGCACGAGCTGCACCAGAAGGTGGAAACGCAGAAGGAACAGT ATCTCAACCTGCGACGCTACCTGCTGCGCGACAAAACGGACGTGTTCGAGGGTGGCGGGG GCGCGAAGGAGGGCAGCAGTGCGGTGGACAAATTTGCCCTCAACATTTCATCCGGCCCGA CCCCGTTCTCGACGGTGATGGGCGGTTACGTGAGTTTCGGCGTTTCGTTGAGACAAACCG GCGGGGATGCGTTCATTCTGCAGAAGCCACCGATAGGGAGCAAAAGGAAT



consensusID : consensus_9346#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 424
fasta sequence
                              [AGATNGCCGAGGTTCGTGAGCACACAGAACGCGATCAGATGCTGCGCCACGAAACGTCCGGCATTACGCGCCAGGCCGATATGGCGCAGCGCACGCAGGAAACGCCGGCCGGGCTGCAGTTCGAGAACACGCTGCGCTGCAGTACTTCATCGAGCTGATCCAGAAGTACGAATCGGACCTGATCAACTGAAGCAGAGGTCGAGCTGACGGAGAAGCACATGAACTCGCTCACCACGCCAGCGTCCGGAAACGTGTGTCCGCCATGGCGCGCCGCATGGTATCTGTCGGCGCTCGGCGTGAAGCTAAAAAACGGCCCGGAGGAGCTGTTAAAACGAACGACGTGTTCTTGCGTGAAGCCAAAGAACGGAAAAGACTTGCGGCAAAGCAACGGGATNAAATTTGGGACAGCTAGTGGTCGCAATGT]

[+] EMBL AL931087             [AGATNGCCGAGGTTCGTGAGCACACAGAACGCGATCAGATGCTGCGCCACGAAACGTCCGGCATTACGCGCCAGGCCGATATGGCGCAGCGCACGCAGGAAACGCCGGCCGGGCTGCAGTTCGAGAACACGCTGCGCTGCAGTACTTCATCGAGCTGATCCAGAAGTACGAATCGGACCTGATCAACTGAAGCAGAGGTCGAGCTGACGGAGAAGCACATGAACTCGCTCACCACGCCAGCGTCCGGAAACGTGTGTCCGCCATGGCGCGCCGCATGGTATCTGTCGGCGCTCGGCGTGAAGCTAAAAAACGGCCCGGAGGAGCTGTTAAAACGAACGACGTGTTCTTGCGTGAAGCCAAAGAACGGAAAAGACTTGCGGCAAAGCAACGGGATNAAATTTGGGACAGCTAGTGGTCGCAATGT]


>consensus_9346#2 AGATNGCCGAGGTTCGTGAGCACACAGAACGCGATCAGATGCTGCGCCACGAAACGTCCG GCATTACGCGCCAGGCCGATATGGCGCAGCGCACGCAGGAAACGCCGGCCGGGCTGCAGT TCGAGAACACGCTGCGCTGCAGTACTTCATCGAGCTGATCCAGAAGTACGAATCGGACCT GATCAACTGAAGCAGAGGTCGAGCTGACGGAGAAGCACATGAACTCGCTCACCACGCCAG CGTCCGGAAACGTGTGTCCGCCATGGCGCGCCGCATGGTATCTGTCGGCGCTCGGCGTGA AGCTAAAAAACGGCCCGGAGGAGCTGTTAAAACGAACGACGTGTTCTTGCGTGAAGCCAA AGAACGGAAAAGACTTGCGGCAAAGCAACGGGATNAAATTTGGGACAGCTAGTGGTCGCA ATGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9346#0      CCGCGGACGCGTGGGTTCAGCGCTTGCTTTCCCTCGTTTTTCTGCGAGGAAAACAAAGTC 60
consensus_9346#1      ------------------------------------------------------------
consensus_9346#2      ------------------------------------------------------------
                                                                                  

consensus_9346#0      ACGGTTTCCGCCGGGAAATCTAAATTTCCCGTCCTTGTGTGTGCACCGTGTTCCGACCTC 120
consensus_9346#1      ------------------------------------------------------------
consensus_9346#2      ------------------------------------------------------------
                                                                                  

consensus_9346#0      CGCCTGCCCGCCGCTCGCCAAGATGTCCGGGTTTTCATTCGGCACCCCAACAACATCGGC 180
consensus_9346#1      ------------------------------------------------------------
consensus_9346#2      ------------------------------------------------------------
                                                                                  

consensus_9346#0      TCCCGCCTTTTCCTTCGGTACGCCAGCGGCAGCAACGACAAGCATCGCGGCAGCCGCCCC 240
consensus_9346#1      ------------------------------------------------------------
consensus_9346#2      ------------------------------------------------------------
                                                                                  

consensus_9346#0      ACTAGCAACGGCAGCAGCGGCAGCGGCACCAGCGACGGGATTTTCCTTCGGAGCCCCGGC 300
consensus_9346#1      ------------------------------------------------------------
consensus_9346#2      ------------------------------------------------------------
                                                                                  

consensus_9346#0      CACCGCAACAACGACGACAGCACCCACGGCCACCGGGTTTAGCTTCGGCAAACCGGCCGC 360
consensus_9346#1      ------------------------------------------------------------
consensus_9346#2      ------------------------------------------------------------
                                                                                  

consensus_9346#0      AACCACAGCAACGGCAGCCGCCCCACTATCGTTCGGCCTCGGAGCTACCTCCACCGCGGC 420
consensus_9346#1      ------------------------------------------------------------
consensus_9346#2      ------------------------------------------------------------
                                                                                  

consensus_9346#0      AACCCCGTTCGGTGCCGGGCTGAGCGTATCGGCCGGAACCACAGCCACCGCCACCACGAC 480
consensus_9346#1      ------------------------------------------------------------
consensus_9346#2      ------------------------------------------------------------
                                                                                  

consensus_9346#0      GTCAACGTTTGCCGTACCCACGCTAAACTTCGGAACTGCTGCAACCGCAACGGCCGGTGG 540
consensus_9346#1      ------------------------------------------------------------
consensus_9346#2      ------------------------------------------------------------
                                                                                  

consensus_9346#0      TGCTACCGGGACGCTTGGGCTTGGAAATGCCGGCGGCGGTCTTTTCGGTGCTGCCAAAGC 600
consensus_9346#1      ------------------------------------------------------------
consensus_9346#2      ------------------------------------------------------------
                                                                                  

consensus_9346#0      GACAACCACCGTAGCCACACTGGCAGCAGCTCCTGCCACCACCACCACCGCCGCCGCCGC 660
consensus_9346#1      ------------------------------------------------------------
consensus_9346#2      ------------------------------------------------------------
                                                                                  

consensus_9346#0      CCCCGCCACGGTTGGGCTGGGCGGCGTTGACATAAACGCCAACCAGCCCAAATCGGTCGA 720
consensus_9346#1      ------------------------------------------------------------
consensus_9346#2      ------------------------------------------------------------
                                                                                  

consensus_9346#0      GGGCAAGAGCGACAACACGAAGGCGAAGGAATCGCAAGTGCCGCAGAAATCATCAGCACC 780
consensus_9346#1      ----------------------------------------------------GAATCGCC 8
consensus_9346#2      ------------------------------------------------------------
                                                                                  

consensus_9346#0      GTGGAGCACCTAAAGGAGTACATCAAGAGCCTGAACAGCACGCTCGCCGAGCTGTCGAAC 840
consensus_9346#1      CGAGGTNAACGTGTCGAGCGAAATTAGAGCCTGAACAGCACGCTCGCCGAGCTGTCGAAC 68
consensus_9346#2      ------------------------------------------------AGATNGCCGAGG 12
                                                                           * ***  

consensus_9346#0      AGCGTGAGCAACAACCAGAACGCGATCAAGATGCTGCGCCACGAAACGTCCGGCATTACG 900
consensus_9346#1      AGCGTAAGCAACAACCAGAACGCGATCAAGATGCTGCGTCACGAAACGTCCGGCATTACG 128
consensus_9346#2      TTCGTGAGCA-CA--CAGAACGCGATCA-GATGCTGCGCCACGAAACGTCCGGCATTACG 68
                        *** **** **  ************* ********* *********************

consensus_9346#0      CGCCAGGCCGATATGGCGCA-CGCACGCAGGAAACGCCGGCCGGGCTGCAGTTCGAGAAC 959
consensus_9346#1      CGCCAGGCCGATATGGCGCAGCGCACGCAGGAAACGCCGGCCGGGCTGCAGTTCGAGAAC 188
consensus_9346#2      CGCCAGGCCGATATGGCGCAGCGCACGCAGGAAACGCCGGCCGGGCTGCAGTTCGAGAAC 128
                      ******************** ***************************************

consensus_9346#0      ACGCTGCCGCTGCAGTACTTCATCGAGCTGATCCAGAAGTACGAATCGGACCTGATCAAC 1019
consensus_9346#1      ACGCTGCCGCTGCAGTACTTCATCGAGCTGATCCAGAAGTACGAATCGGACCTGATCAAC 248
consensus_9346#2      ACGCTGC-GCTGCAGTACTTCATCGAGCTGATCCAGAAGTACGAATCGGACCTGATCAAC 187
                      ******* ****************************************************

consensus_9346#0      CTGAAGCAGCAGGTCGAGCTGACGGAGAAGCACATGAACTCGCTCACCACGCCGCAGTAC 1079
consensus_9346#1      CTGAAGCAGCAGGTCGAGCTGACCGAGAAGCACATGAACTCGCTCACCACGCCGCAGTAC 308
consensus_9346#2      -TGAAGCAG-AGGTCGAGCTGACGGAGAAGCACATGAACTCGCTCACCACGCCA------ 239
                       ******** ************* *****************************       

consensus_9346#0      TTTACGCCCCAGGATCTGAAGCTCTGCCTGCAGCAGATCTACGAAAGCTTCGTGGCCCTG 1139
consensus_9346#1      TTTACGCCCCAGGATCTGAAGCTCTGCCTGCAGCAGATCTACGAAAGCTTCGTGGCCCTG 368
consensus_9346#2      ---GCGTCCGGAAACGTG------TGTCCGCCATGGCGC-------GCCGCATGGTATCT 283
                          ** **    *  **      ** * **    *  *       **  * ***     

consensus_9346#0      GCCGGCCGCCTGCACGAGCTGCACCAGAAGGTGGAAACGCAGAAGGAACAGTATCTCAAC 1199
consensus_9346#1      GCCGGCCGCCTGCACGAGCTGCACCAGAAGGTGGAAACGCAGAAGGAACAGTATCTCAAC 428
consensus_9346#2      GTCGGCGCTCGGCGTGAA----GCTAAAAAACGG----CCCGGAGGAGC--TGTTAAAAC 333
                      * ****   * **  **      * * **   **     * * **** *  * *   ***

consensus_9346#0      CTGCGACGCTACCTGCTGCGCGACAATACGGACGTGTTCGAGGGTGGCGAGGGCGCGAAG 1259
consensus_9346#1      CTGCGACGCTACCTGCTGCGCGACAAAACGGACGTGTTCGAGGGTGGCGGGGGCGCGAAG 488
consensus_9346#2      GAACGACGTGTTCT--TGCGTGAAGCCAAAGA-ACGGAAAAGACTTGCGGCAAAGCAACG 390
                         *****    **  **** **    *  **   *    **  * ***     ** * *

consensus_9346#0      GAGGGCAGCAGTGCGGTGGACAAATTTGCCCTCAACATCTCATCCGGCCCGACCCCGTTC 1319
consensus_9346#1      GAGGGCAGCAGTGCGGTGGACAAATTTGCCCTCAACATTTCATCCGGCCCGACCCCGTTC 548
consensus_9346#2      G-GATNAAATTTGGGACAGCTAG---TGGTCGCAATGT---------------------- 424
                      * *   *    ** *   *  *    **  * ***  *                      

consensus_9346#0      TCGACGGTGATGGGCGGTAACGTGAGTTTCGGCGTTTCGTTGAGACAAACCGGTGCCGGA 1379
consensus_9346#1      TCGACGGTGATGGGCGGTTACGTGAGTTTCGGCGTTTCGTTGAGACAAACCGGCGGGGAT 608
consensus_9346#2      ------------------------------------------------------------
                                                                                  

consensus_9346#0      ACGTCGCTGTGGTCGGGCGCAGGGAC-GGGTTTGGCGGGTGCCGACCAGGGCAAGGGTGC 1438
consensus_9346#1      GCGTTCATTCTGCAGAAGCCACCGATAGGGAGCAAAAGGAAT------------------ 650
consensus_9346#2      ------------------------------------------------------------
                                                                                  

consensus_9346#0      TCCGTTCGGGCAGACGAACTTTTTCGGCATGAACGCGGGCGGCAGTGGTGTGGCGGGTGG 1498
consensus_9346#1      ------------------------------------------------------------
consensus_9346#2      ------------------------------------------------------------
                                                                                  

consensus_9346#0      TAGCGATGCGTTCGGAAATCGGTTAGGGTTTGGTTTTGGCTCGACGGCAACGACCGGAGC 1558
consensus_9346#1      ------------------------------------------------------------
consensus_9346#2      ------------------------------------------------------------
                                                                                  

consensus_9346#0      GGATGCGTTCAATCTGCAGAAGCCACCGATAGGGAGCAAAAGGAATAAGTTGTAATAATA 1618
consensus_9346#1      ------------------------------------------------------------
consensus_9346#2      ------------------------------------------------------------
                                                                                  

consensus_9346#0      AAGAGTGTAATTTGGAGAAACCTTTGAGAACGTGTATGACGAACAGATACAATCACGAGT 1678
consensus_9346#1      ------------------------------------------------------------
consensus_9346#2      ------------------------------------------------------------
                                                                                  

consensus_9346#0      TTAGGTCGTTTTAATTGGGTTACTTCCCGAAATTCGTGAAAAAAAGTGTTCAGGTTAAGG 1738
consensus_9346#1      ------------------------------------------------------------
consensus_9346#2      ------------------------------------------------------------
                                                                                  

consensus_9346#0      TCGGTAATTCTAGCCAAGGTTTTG 1762
consensus_9346#1      ------------------------
consensus_9346#2      ------------------------
                                              




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)