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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9356#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1513 fasta sequence
[CCGGGCCAGTCCACAGCGTTCTCTTCAGGGTTTTGAATTGCAAGTGTGTCGATTTTACGAATAGTAAGCAAAAAAGCAAGTCTACTCACCATGTCGGAAGCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCGAGGACGCCGATCTGGAAAATGCAAGCGACGGGGACGACGATGATGAGGATCT---GGAGGAGAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGATGAGGAGCTGGTGTGCGACGAATCCGCCTACATTATGCTGCACCAGGCACATACCGGAGCACCCTGCCTCAGCTTCGACATTGTGAGCGATCCGCTCGGCGATGATCGGGAAACGTTCCCCCTGACGGCGTATGTCGTCGCCGGTACGCAAGCGGCTCGTACGCACGTGAACAGCGTGATCGTAATGAAGATGGCCAATCTGACGCGCACCTCGAAACAGTCGGCCGACGGTGAGTCCGACGACGACGAGGAGGTGAGCGATAGCGAGGACGTGAACGAGGACCAAACGCCCATCCTGACGAGCGTGATGATCAAGCACCCCGGGTGCGTAAACCGGTTGCGTGTGTCCACGTTCGGCAGC-TCGCAGTACGTGGCCTCGTGGAGCGAGATGGGCAAGGTGCACATTTACAACATCAACGAACAGCTGGCGGCCATCGACGATAGCAGGGCGCGCAAGACGTACCAGCAGAACAAGACCGGTGACGGGGTGAAGCCAGATTTCACCTTTTCCGGGCACCAGAAGGAAGGCTTCGCGATCGACTGGTGTCCGACGACTCGTGGCATGCTAGCGACGGGCGACTGTCGGCGTGACATTCACATCTGGCGCCCGAACGACAAGGGCGCTTGGAATGTGGACCAGCGGCCGCTCGTGGGACACACGGACTCGGTCGAAGATATACAGTGGAGCCCGAACGAAGCGAATGTGCTCGCCTCCTGCTCGGTGGACAAATCGATCCGCATTTGGGACTGTCGGGCGGCGCCCGCCAAAGCCTGCATGCTGACGGCGGAGAATGCGCACGAAAGCGATGTGAATGTAATTAGCTGGAATCGTAACGAACCGCTCATCGCTAGTGGTGGCGATGACGGTGTGCTGCAGATATGGGATCTGCGTCAGTTCCAGTCGAAAACACCGGTGGCAACGTTTAAGCACCACACCGACCACATAACGACCGTCGAGTGGCATCCGAAGGAATCGACCATCCTGGCGTCCGGTGGTGACGACGATCAGATTGCCCTGTGGGATCTGTCCGTGGAGAAGGACGATGGGGACGATGCGAATGACGATCCGAACTTGAAGGATCTTCCACCCCAGCTGCTGTTCATCCACCAGGGACAGAGCGAGATCAAGGAGCTGCACTGGCATCCGCAGCTGAAGGGTGTGATACTGTCCACGGCACACAGCGGGTTCAACGTTTTCCGTACGATAAGCGTTTAATGGCAATAGGAATACATTCACAGGAGCACAACGACGGTGAGTGCTG]
[+] EMBL BM601121 [CCGGGCCAGTCCACAGCGTTCTCTTCAGGGTTTTGAATTGCAAGTGTGTCGATTTTACGAATAGTAAGCAAAAAAGCAAGTCTACTCACCATGTCGGAAGCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCGAGGACGCCGATCTGGAAAATGCAAGCGACGGGGACGAC GATGAGGATCTGGAGGAGGAGAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGATGAGGAGCTGGTGTGCGACGAATCCGCGTACATTATGCTGCACCAGGCACATACCGGAGCACCCTGCCTCAGCTTCGACATTGTGAGCGATCCGCTCGGCGATGATCGGGAAACGTTCCCCCTGACGGCGTATGTCGTGGCCGGTACGCAAGCGGCTCGTACGCACGTGAACAGCGTGATCGTAATGAAGATGGCCAATCTGACGCGCACCTCGAAACAGTCGGCCGACGGTGAGTCGGACGATGACGAGGAGGTGAGCGATAGCGAGGACGTGAACGAGGACCAAACGCCCATCCTGACGAGCGTGATGATCAAGCACCCCGGGTGCGTAAACCGGTTGCGTGTGTCCACGTTCGGCAGCTTCGCAGTACGTGGCCTCGTGGAGCGAGATGGGCA ]
[+] EMBL BM609255 [ CCGGTCCACAGCGTTCTGTTCAGGGTTTTGAATTGCAAGTGTGTCGATTTTACGAATAGTAAGCAAAAAAGTAACTCTACTCACCATGTCGGAAGCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCGAGGACGCCGATCTGGAAAATGCAAGCGACGGGGACGATGATGATGAGGATCT GGAGGAGAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGATGAGGAGCTGGTTTGCGACGAATCCGCCTACATTATGCTGCACCAGGCACATACCGGAGCACCCTGCCTCAGCTTCGACATTGTGAGCGATCCGCTCGGCGATGATCGGGAAACGTTCCCCCTGACGGCGTATGTCGTGGCCGGTACGCAAGCGGCTCGTACGCACGTGAACAGCGTGATCGTAATGAAGATGGCCAATCTGACGCGCACCTCGAAACAGTCGGCTGATGGTGAGTCGGATGATGATGAGGAGGTGAGCGATAGCGAAGACGTGAACGAGGACCAAACGCCCATCCTGACGAGCGTGATGATCAAGCACCCCGGGTGCGTGAACCGGTTGCGTGTGTCCACGTTCGGCAGC TCGCAGTACGTGGCCTCGTGGAGCGAGATGGGCAAGGTGCACATTTACAACATCAACGAACAGCTGGCGGCCATCGACGA ]
[+] EMBL BX605619 [ AGTCCACAGCGTTCTCTTCAGGGTTTTGAACTGCAAGTGTGTCGATTTTACGAATAGTAAGCAAAAAAGTAACTCTACTCACCATGTCGGAAGCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCGAGGACGCCGATCTGGAAAATGCAAGCGACGGGGACGATGATGATGAGGATCT GGAGGAGAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGACGAGGAGCTGGTGTGCGACGAGTCCGCCTACATTATGTTGCACCAGGCACATACCGGAGCACCCTGCCTCAGCTTCGACATTGTGAGCGATCCGCTCGGCGATGATCGGGAAACGTTCCCCCTGACGGCGTATGTCGTCGCCGGTACGCAAGCGGCCCGTACGCACGTGAACAGCGTGATCGTAATGAAGATGGCCAATCTGACGCGCACCTCGAAACAGTCGGTCGACGGTGAGTCCGACGACGACGAGGAGGTGAGCGATAGCGAGGACGTGAACGAGGACCAAACGCCCATCCTGACGAGCGTGATGATCAAGCACCCCGGGTGCGTAAACCGGTTGCGTGTGTCCACGTTCGGCAGC TCGCAGTACGTGGCCTCGTGGAGCGAGATGGGCAAGGTGCACATTTACAACATCAACGAACAGCTGGCGGCCATCGACGATAGCAGGGCGCGCAAGACGTACCAGCAGAACAAGACCGGTGACGGGGTGAA ]
[+] EMBL BM596149 [ CCGCAGCGTTCTCTTCAGGGTTTTGAATTGCAAGTGTGTCGATTTTACGAATAGTAAGCAAAAAAGCAAGTCTACTCACCATGTCGGAAGCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCGAGGACGCCGATCTGGAAAATGCAAGCGACGGGGACGAC GATGAGGATCTGGAGGAGGAGAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGATGAGGAGCTGGTGTGCGACGAATCCGCGTACATTATGCTGCACCAGGCACATACCGGAGCACCCTGCCTCAGCTTCGACATTGTGAGCGATCCGCTCGGCGATGATCGGGAAACGTTCCCCCTGACGGCGTATGTCGTGGCCGGTACGCAAGCGGCTCGTACGCACGTGAACAGCGTGATCGTAATGAAGATGGCCAATCTGACGCGCACCTCGAAACAGTCGGCCGACGGTGAGTCGGACGATGACGAGGAGGTGAGCGATAGCGAGGACGTGAACGAGGACCAAACGCCCATCCTG ]
[+] EMBL CNS092X6 [ GCGTTCTCTTCAGGGGTTTGAATTGCAAGTGTGTCGATTTTACGAATAGTAAGCAAAAAAGCAAGTCTACTCACCATGTCGGAACCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCGAGGACGCCGATCTGGAAAATGCAAGCGACGGGGACGACGATGATGAGGATCT GGAGGAGAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGACGAGGAGCTGGTGTGCGACGAATCCGCCTACATTATGCTGCACCAGGCACATACCGGAGCGCCCTGCCTCAGCTTCGACATTGTAAGCGATCCGCTCGGCGATGATCGGGAAACGTTCCCTCTGACGGCGTATGTCGTCGCCGGTACGCAAGCGGCTCGTACGCACGTGAACAGCGTGATCGTAATGAAGATGGCCAATCTGACGCGCACCTCGAAACAGTCGGCCGATGGTGAGTCCGACGACGACGAGGAGGTGAGCGATAACGAGGACGTGAACGAGGACCAAACGCCCATCCTGACGAGCGTGATGATCAAGCACCCCGGGTGCGTAAACCGGTTGCGTGTGTCCACGTTCGGCAGC TCGCAGTACGTGGCCTCGTGGAGCGAGATGGGCAAGGTGCACATTTACAACATCAACGAACAGCTGGCGGCCATCGACGATAGCAGGGCGCGCAAGACGTACCAGCAGAACAAGACCGGTGACGGGGTGAAGCCAGATTTCACCTTTTCCGGGCACCAGAAGGAAGGCTTCGCGATCGACTGGTGTCCGACGACTCGTGGCATGCTAGCGACGGGCGACTGTCGGCGTGACATTCACATCTGGCGCCCGAACGACAAGGGCGCTTGGAATGTGGACCAGCGGCCGCTCGTGGGACACACGGACTCGGTCGAAGATATACAGTGGAGCCCGAACGAAGCGAATGTGCTCGCCTCCTGCTCGGTGGACAAATCGATCCGCATTTGGGACTGTCGGGCGGCGC ]
[+] EMBL CNS08O9F [ CAGGGGTTTGAATTGCAAGTGTGTCGATTTTACGAATAGTAAGCAAAAAAGCAAGTCTACTCACCATGTCGGAACCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCGAGGACGCCGATCTGGAAAATGCAAGCGACGGGGACGACGATGATGAGGATCT GGAGGAGAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGACGAGGAGCTGGTGTGCGACGAATCCGCCTACATTATGCTGCACCAGGCACATACCGGAGCGCCCTGCCTCAGCTTCGACATTGTAAGCGATCCGCTCGGCGATGATCGGGAAACGTTCCCTCTGACGGCGTATGTCGTCGCCGGTACGCAAGCGGCTCGTACGCACGTGAACAGCGTGATCGTAATGAAGATGGCCAATCTGACGCGCACCTCGAAACAGTCGGCCGATGGTGAGTCCGACGACGACGAGGAGGTGAGCGATAACGAGGACGTGAACGAGGACCAAACGCCCATCCTGACGAGCGTGATGATCAAGCACCCCGGGTGCGTAAACCGGTTGCGTGTGTTCACGTTCGGCAGC TCGCAGTACGTGGCCTCGTGGAGCGAGAAGGGCAAGGTGCACATTTACAACATCAACGAACAGCTGGCGGCCATCGACGATAGCAGGGCGCGCAAGACGTACCAGCAGAACAAGACCGGTGACGGGGTGAAGCCAGAATTCACCTTTTCCGGGCACCAGAAGGAAGGCTTCGCGATCGACTGGTGTCCGACGACTCGTGGCATGCTAGCGACGGGCGACTGTCGGCGTGA ]
[+] EMBL BM589201 [ ccgGGGTTTTGAATTGCAAGTGTGTCGATTTTACGAATAGTAAGCAAAAAAGCAAGTCTACTCACCATGTCGGAAGCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCGAGGACGCCGATCTGGAAAATGCAAGCGACGGGGACGAC GATGAGGATCTGGAGGAGGAGAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGATGAGGAGCTGGTGTGCGACGAATCCGCGTACATTATGCTGCACCAGGCACATACCGGAGCACCCTGCCTCAGCTTCGACATTGTGAGCGATCCGCTCGGCGATGATCGGGAAACGTTCCCCCTGACGGCGTATGTCGTGGCCGGTACGCAAGCGGCTCGTACGCACGTGAACAGCGTGATCGTAATGAAGATGGCCAATCTGACGCGCACCTCGAAACAGTCGGCC ]
[+] EMBL BX607413 [ AACTGCATGTGTGTCGATTTTACGAATAGTAAGCAAAAAAGTAACTCTACTCACCATGTCGGAAGCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCGAGGACGCCGATCTGGAAAATGCAAGCGACGGGGACGATGATGATGAGGATCT GGAGGAGAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGACGAGGAGCTGGTGTGCGACGAGTCCGCCTACATTATGTTGCACCAGGCACATACCGGAGCACCCTGCCTCAGCTTCGACATTGTGAGCGATCCGCTCGGCGATGATCGGGAAACGTTCCCCCTGACGGCGTATGTCGTCGCCGGTACGCAAGCGGCCCGTACGCACGTGAACAGCGTGATCGTAATGAAGATGGCCAATCTGACGCGCACCTCGAAACAGTCGGTCGACGGTGAGTCCGACGACGACGAGGAGGTGAGCGATAGCGAGGACGTGAACGAGGACCAAACGCCCATCCTGACGAGCGTGATGATCAAGCACCCCGGGTGCGTAAACCGGTTGCGTGTGTCCACGTTCGGCAGC TCGCAGTACGTGGCCTCGTGGAGCGAGATGGGCAAGGTGCACATTTACAACATCAACGAACAGCTGGCGGCCATCGACGATAGCAGGGCGCGCAAGACGTACCAGCAGAACAAGACCGGTGACGGGGTGAAGCCAGATTTCACCTTTTCCGGGCACCAGAAGGAAGGCTTCGCGATCGACTGGTGTCCGACGACGCGTGGCATGCTGGCAACGGGCGACTGTCGGCGTGACATTCACATC ]
[+] EMBL BX626945 [ GATGAGGATCTGGAGGAGGAGAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGATGAGGAGCTGGTGTGCGACGAATCCGCGTACATTATGCTGCACCAGGCACATACCGGAGCGCCCTGCCTCAGCTTCGACATTGTAAGCGATCCGCTCGGTGATGATCGGGAAACGTTCCCTCTGACGGCGTATGTCGTCGCCGGTACGCAAGCGGCTCGTACGCACGTGAACAGCGTGATCGTAATGAAGATGGCCAATCTGACGCGCACCTCGAAACAGTCGGCCGATGGTGAGTCCGATGACGACGAGGAGGTGAGCGATAGCGAGGACGTGAACGAGGACCAAACGCCCATCCTGACGAGCGTGATGATCAAGCACCCCGGTTGCGTAAACCGGTTGCGTGTGTCCACGTTCGGCAGC TCGCAGTACGTGGCCTCGTGGAGTGAGATGGGCAAGGTGCACATTTACAACATCAACGAACAGCTGGCGGCCATCGACGATAGCAGGGCGCGCAAGACGTACCAGCAGAACAAGACCGGTGACGGGGTGAAGCCAGATTTCACCTTTTCCGGGCACCAGAANGAANGCTTCGCGATCGACTGGTGTCCGACGACGCGTGGCATGCTGGCGACGGGCGACTGTCNGCGTGATATTCACATCTGGCGCCCGAACGACAANGGCGCGTGGATTGTGGACCANCGGCCGCTCG ]
[-] EMBL CNS092X7 [ GTAACCCGGTTGCGTGTGTCCACGTTCGGCAGC TCGCAGTACGTGGCCTCGTGGAGCGAGATGGGCAAGGTGCACATTTACAACATCAACGAACAGCTGGCGGCCATCGACGATAGCAGGGCGCGCAAGACGTACCAGCAGAACAAGACCGGTGACGGGGTGAAGCCAGATTTCACCTTTTCCGGGCACCAGAAGGAAAGGTTCGCGATCGACTGGTGTCCGACGACTCGTGGCATGCTAGCGACGGGCGACTGTCGGCGTGACATTCACATCTGGCGCCCGAACGACAAGGGCGCTTGGAATGTGGACCAGCGGCCGCTCGTGGGACACACGGACTCGGTCGAAGATATACAGTGGAGCCCGAACGAAGCGAATGTGCTCGCCTCCTGCTCGGTGGACAAATCGATCCGCATTTGGGACTGTC GGCGGCGCCCGCCAAAGCCTGCATGCTGACGGCGGAGAATGCGCACGAAAGCGATGTGAATGTAATTAGCTGGAATCGTAACGAACCGCTCATCGCTAGTGGTGGCGATGACGGTGTGCTGCAGATATGGGATCTGCGTCAGTTCCAGTCGAAAACACCGGTGGCAACGTTTAAGCACCACACCGACCACATAACGACCGTCGAGTGGCATCCGAAGGAATCGACCATCCTGGCGTCCGGTGGTGACGACGATCAGATTGCCCTGTGGGATCTGTCCGTGGAGAAGGACGATGGGGACGATGCGAATGACGATCCGAACTTGAAGGATCTTCCACCCCAGCTGCTGTTCATCCACCAGGGACAGAGCGAGATCAAGGAGCTGCACTGGCATCCGCAGCTGAAGGGTGTGATACTGTCCACGGCACACAGCGGGTTCAACGTTTTCCGTACGATAAGCGTTTAATGGCAATAGGAATACATTCACAGGAGCACAACGACGGTGAG ]
[-] EMBL CNS09OQX [ GGCCTCGTGGAGCGAGATGGGCAAGGTGCACATTAACAACATCAACGAACAGCTGGCGGCCATCGACGATAGCAGGGCGCGCAAGACGTACCAGCAGAACAAGACCGGTGACGGGGTGAAGCCAGATTTCACCTTTTCCGGGCACCAGAAGGAAAGGTTCGCGATCAACTGGTGTCCGACGACTCGTGGCATGCTAGCGACGGGCGACTGTCGGCGTGAAATTCACATCTGGCGCCCGAACGACAAGGGCGCTTGGAATGTGGACCAGCGCCCGCTCGTGGGACACACGGACTCGGTCGAAGATATACAGTGGAGCCCGAACGAAGCGAATGTGCTCGCCTCCTGCTCGGTGGACAAATCGATCCGCATTTGGAACTGTCGGGCGGCGCCCGCCAAAGCCTGCATGCTGACGGCGGAGAATGCGCACGAAAGCGATGTGAATGTAATTAGCTGGAATCGTAACGAACCGCTCATCGCTAGTGGTGGCGATGACGGTGTGCTGCAGATATGGGATCTGCGTCAGTTCCAGTCGAAAACACCGGTGGCAACGTTTAAGCACCACACCGACCACATAACGACCGTCGAGTGGCATCCGAAGGAATCGACCATCCTGGCGTCCGGTGGTGACGACGATCAGATTGCCCTGTGGGATCTGTCCGTGGAGAAGGACGATGGGGACGATGCGAATGACGATCCGAACTTGAAGGATCTTCCACCCCAGCTGCTGTTCATCCACCAGGGACAGAGCGAGATCAAGGAGCTGAACTGGCATCCGCAGCTGAAGGGTGTGATACTGTCCACGGCACACAGCGGGTTCAACGTTTTCCGTACGATAAGCGTTTAATGGCAATAGGAATACATTCACAGGAGCACAACGACGGTGAGTGCTG]
[-] EMBL CNS08O9G [ TGGACCAGCGGCCGCTCGTGGGACACACGGACTCGGTCGAAGATATACAGTGGAGCCCGAACGAAGCGAATGTGCTCGCCTCCTGCTCGGTGGACAAATCGATCCGCATTTGGGACTGTCGGGCGGCGCCCGCCAAAGCCTGCATGCTGACGGCGGAGAATGCGCACGAAAGCGATGTGAATGTAATTAGCTGGAATCGTAACGAACCGCTCATCGCTAGTGGTGGCGATGACGGTGTGCTGCAGATATGGGATCTGCGTCAGTTCCAGTCGAAAACACCGGTGGCAACGTTTAAGCACCACACCGACCACATAACGACCGTCGAGTGGCATCCGAAGGAATCGACCATCCTGGCGTCCGGTGGTGACGACGATCAGATTGCCCTGTGGGATCTGTCCGTGGAGAAGGACGATGGGGACGATGCGAATGACGATCCGAACTTGAAGGATCTTCCACCCCCGCTGCTGTTCATCCACCAGGGACAGAGCGAGATCAAGGAGCTGAACTGGCATCCGCAGCTGAAGGGTGTGATACTGTCCACGGCACACAGCGGGTTCAACGTTTTCCGTACGATAAGCGTTTAATGGCAATAGGAATACATTCACAGGAGCACAACGcgcg ]
[-] EMBL AGA282262 [ GGTGGCGATGACGGTGTGCTGCAGATATGGAATCTGCGTCAGTTCCAGTCGAAAACACCGGTGGCAACGTTTAAGCACCACACCGACCACATAACGACCGTCGAGTGGCATCCGAAGGAATCGACCATCCTGGCGTCCGGTGGTGACGACGATCAGATTGCCCTGTGGGATCTGTCCGTGGAGAAGGACGATGGGGACGATGCGAATGACGATCCGAACTTGAAGGATCTTCCACCCCAGCTGCTGTTCATCCACCAGGGACAGAGCGAGATCAAGGAGCTGCACTGGCATCCGCAGCTGAAGGGTGTGATACTGGGCACGGCACACAGCGGGTT ]
consensusID : consensus_9356#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 928 fasta sequence
[TTCTCTTCAGGGGTTTGAATTGCAAGTGTGTCGATTTTACGAATAGTAGGCAAAAAAGCAAGTCTACTCACCATGTCGGAACCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCGAGGACGCCGATCTGGAAAATGCAAGCGCACGGGGACGACGATGATGAGGATCTGGAGGAGAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGACGAGGAGGTGAGCGATAACGAGGACGTGAACGAGGACCAAACGCCCATCCTGACGAGCGTGATGATCAAGCACCCCGGGTGCGTAAACCGGTTGCGTGTGTCCACGTTCGGCAGCTCGCAGTACGTGGCCTCGTGGAGCGAGATGGGCAAGGTGCACATTTACAACATCAACGAACAGCTGGCGGCCATCGACGATAGCAGGGCGCGCAAGACGTACCAGCAGAACAAGACCGGTGACGGGGTGAAGCCAGATTTCACCTTTTCCGGGCACCAGAAGGAAGGCTTCGCGATCGACTGGTGTCCGACGACTCGTGGCATGCTAGCGACGGGCGACTGTCGGCGTGACATTCACATCTGGCGCCCGAACGACAAGGGCGCTTGGGAATGTGGACCAGCGGCCGCTCGTGGGGACACACGGACTCGGTCGAAGATATACAGTGGAGCCCGAACGAAGCGAATGTGCTCGCCTCCTGCTCGGTGGACAAATCGATCCGCATTTGGGACTGTCGGGCGGCGCCGCCAAAAGCCTGCATGCTGACGGCGGAGAATGCGCACGAAAGCGATGTGAATGTAATTAGCTGGAATCGTAACGAACCGCTCATCGCTAGTGGTGGCGATGACGGTGTGCTGCAGATATGGGATCTGCGTCAGTTCCAGTCGAAAACACCGGGTGGCAACGTTTAAGCACCACACC]
[+] EMBL CNS09OQW [TTCTCTTCAGGGGTTTGAATTGCAAGTGTGTCGATTTTACGAATAGTAGGCAAAAAAGCAAGTCTACTCACCATGTCGGAACCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCGAGGACGCCGATCTGGAAAATGCAAGCGCACGGGGACGACGATGATGAGGATCTGGAGGAGAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGACGAGGAGGTGAGCGATAACGAGGACGTGAACGAGGACCAAACGCCCATCCTGACGAGCGTGATGATCAAGCACCCCGGGTGCGTAAACCGGTTGCGTGTGTCCACGTTCGGCAGCTCGCAGTACGTGGCCTCGTGGAGCGAGATGGGCAAGGTGCACATTTACAACATCAACGAACAGCTGGCGGCCATCGACGATAGCAGGGCGCGCAAGACGTACCAGCAGAACAAGACCGGTGACGGGGTGAAGCCAGATTTCACCTTTTCCGGGCACCAGAAGGAAGGCTTCGCGATCGACTGGTGTCCGACGACTCGTGGCATGCTAGCGACGGGCGACTGTCGGCGTGACATTCACATCTGGCGCCCGAACGACAAGGGCGCTTGGGAATGTGGACCAGCGGCCGCTCGTGGGGACACACGGACTCGGTCGAAGATATACAGTGGAGCCCGAACGAAGCGAATGTGCTCGCCTCCTGCTCGGTGGACAAATCGATCCGCATTTGGGACTGTCGGGCGGCGCCGCCAAAAGCCTGCATGCTGACGGCGGAGAATGCGCACGAAAGCGATGTGAATGTAATTAGCTGGAATCGTAACGAACCGCTCATCGCTAGTGGTGGCGATGACGGTGTGCTGCAGATATGGGATCTGCGTCAGTTCCAGTCGAAAACACCGGGTGGCAACGTTTAAGCACCACACC]
consensusID : consensus_9356#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 801 fasta sequence
[CCCCGCNGGTTAAGCTGGCGGCATCGACGATAGCAGGTGCGCAAGTACGTACCAGCAGAACAAGACCGGTGACGGGGTGAAGCCAGATTTCACCTTTTCCGGGCACCAGAAGGAAGTGCTTCGCGATCGACTGGTGTCCGACGACGCGTGGCATGCTGGCGACGTGGCGACTGTCGGCTGTGATATTCACATCTGGCGCCCGAACGACAAGGGCGCGTGGATTGTGGACCAGCTGGCCGCTCGTGGGACACACGGACTCGGTCGAAGATATACAGTGGAGCCCGAACGAAGCGAATGTGCTCGCCTCCTGCTCGGTGGACAAATCGATCCGCATTTGGGACTGTCGGGCGGCGCCCGCCAAAGCCTGCATGCTGACGGCGGAGCAATGCGCACGAAAGCGATGTGAATGTAATTAGCTGGAATCGTAACGAACCGCTCATCGCTAGTGGTGGCGATGACGGATGTGCTGCAGATATGGGATCTGCGTCAGTTCCAGTCGCAAAACACCGGTGGCAACGTTTAAGCACCACACCGACCACATAACGAACGTCGAGTGGCATCCGAAGGAATCGACATCCTGGCGTCAGGTGGTGACCGACGATCAGATTGCCCTGTGGGGATCTTCCGNGGGAGAAGACCGCATGGGGACNCGNATGCGAAATGACCGATCCCGAACTTGACAGGATCTTCCAACCCCAAGTGCTGTNCATCCACCAGGGAACAGAAGCGAGATCAANGAGCTTGGACTGGCATCCCGCACTGAAAGGGTGTGACACTGTCCAAGGNAACAACANGGGGTCA]
[+] EMBL AL692291 [CCCCGCNGGTTAAGCTGGCGGCATCGACGATAGCAGGTGCGCAAGTACGTACCAGCAGAACAAGACCGGTGACGGGGTGAAGCCAGATTTCACCTTTTCCGGGCACCAGAAGGAAGTGCTTCGCGATCGACTGGTGTCCGACGACGCGTGGCATGCTGGCGACGTGGCGACTGTCGGCTGTGATATTCACATCTGGCGCCCGAACGACAAGGGCGCGTGGATTGTGGACCAGCTGGCCGCTCGTGGGACACACGGACTCGGTCGAAGATATACAGTGGAGCCCGAACGAAGCGAATGTGCTCGCCTCCTGCTCGGTGGACAAATCGATCCGCATTTGGGACTGTCGGGCGGCGCCCGCCAAAGCCTGCATGCTGACGGCGGAGCAATGCGCACGAAAGCGATGTGAATGTAATTAGCTGGAATCGTAACGAACCGCTCATCGCTAGTGGTGGCGATGACGGATGTGCTGCAGATATGGGATCTGCGTCAGTTCCAGTCGCAAAACACCGGTGGCAACGTTTAAGCACCACACCGACCACATAACGAACGTCGAGTGGCATCCGAAGGAATCGACATCCTGGCGTCAGGTGGTGACCGACGATCAGATTGCCCTGTGGGGATCTTCCGNGGGAGAAGACCGCATGGGGACNCGNATGCGAAATGACCGATCCCGAACTTGACAGGATCTTCCAACCCCAAGTGCTGTNCATCCACCAGGGAACAGAAGCGAGATCAANGAGCTTGGACTGGCATCCCGCACTGAAAGGGTGTGACACTGTCCAAGGNAACAACANGGGGTCA]
consensusID : consensus_9356#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 602 fasta sequence
[CCGCCCACGCGTCCGAGCGTTCTCTTCGGGGGGTTTCAATTGAAAGTGTGCCGATTTTACGAATAGTAAGCAAAAAAGCAACTCTACTCACCATGTCGGAAGCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCGAGGACGCCGATCTGGAAAATGCAAGCGACGGGGACGATGATGATGAGGATCTGGAGGAGAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGATGAGGAGCTGGTGTGCGACGAATCCGCGTACATTATGCTGCACCAGGCACATACCGGAGCGCCCTGCCTCAGCTTCGACATTGTAAGCGATCCGCTCGGTGATGATCGGGAAACGTTCCCTCTGACGGCGTATGTCGTCGCCGGTACGCAAGCGGCTCGTACGCACGTGAATAGTGTGATCGTAATGAAGATGGCCAATCTGACGCGCACCTCGAAACAGTCGGCCGACGGTGAGTCGGACGATGACGAGGAGGTGAGCGATAGCGAGGACGTGAACGAGGACCAAACGCCCATCCTGACGAGCGTGATGATCAAGCACCCTGGGTGCGTTAACCGGTTGCGTGTGTCC]
[+] EMBL BM657543 [CCGCCCACGCGTCCGAGCGTTCTCTTCGGGGGGTTTCAATTGAAAGTGTGCCGATTTTACGAATAGTAAGCAAAAAAGCAACTCTACTCACCATGTCGGAAGCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCGAGGACGCCGATCTGGAAAATGCAAGCGACGGGGACGATGATGATGAGGATCTGGAGGAGAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGATGAGGAGCTGGTGTGCGACGAATCCGCGTACATTATGCTGCACCAGGCACATACCGGAGCGCCCTGCCTCAGCTTCGACATTGTAAGCGATCCGCTCGGTGATGATCGGGAAACGTTCCCTCTGACGGCGTATGTCGTCGCCGGTACGCAAGCGGCTCGTACGCACGTGAATAGTGTGATCGTAATGAAGATGGCCAATCTGACGCGCACCTCGAAACAGTCGGCCGACGGTGAGTCGGACGATGACGAGGAGGTGAGCGATAGCGAGGACGTGAACGAGGACCAAACGCCCATCCTGACGAGCGTGATGATCAAGCACCCTGGGTGCGTTAACCGGTTGCGTGTGTCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9356#0 ------------------------------------------------------------
consensus_9356#3 ------------------------------------------------------------
consensus_9356#1 TTCTCTTCAGGGGTTTGAATTGCAAGTGTGTCGATTTTACGAATAGTAGGCAAAAAAGCA 60
consensus_9356#2 ------------------------------------------------------------
consensus_9356#0 ------------------------------------------------------------
consensus_9356#3 ------------------------------------------------------------
consensus_9356#1 AGTCTACTCACCATGTCGGAACCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATC 120
consensus_9356#2 ------------------------------------------------------------
consensus_9356#0 ------------------------------------------------------------
consensus_9356#3 ------------------------------------------------------------
consensus_9356#1 GAGGACGCCGATCTGGAAAATGCAAGCGCACGGGGACGACGATGATGAGGATCTGGAGGA 180
consensus_9356#2 ------------------------------------------------------------
consensus_9356#0 ------------------------------------------------------------
consensus_9356#3 ------------------------------------------------------------
consensus_9356#1 GAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGACGAGGA 240
consensus_9356#2 ------------------------------------------------------------
consensus_9356#0 ------------------------------------------------------------
consensus_9356#3 ------------------------------------------------------------
consensus_9356#1 GGTGAGCGATAACGAGGACGTGAACGAGGACCAAACGCCCATCCTGACGAGCGTGATGAT 300
consensus_9356#2 ------------------------------------------------------------
consensus_9356#0 ------------------------------------------------------------
consensus_9356#3 ------------------------------------------------------------
consensus_9356#1 CAAGCACCCCGGGTGCGTAAACCGGTTGCGTGTGTCCACGTTCGGCAGCTCGCAGTACGT 360
consensus_9356#2 ------------------------------------------------------------
consensus_9356#0 ------------------------------------CCGGGCCAGTCCAC-AGCGTTCTC 23
consensus_9356#3 ------------------------------------CCGCCCACGCGTCCGAGCGTTCTC 24
consensus_9356#1 GGCCTCGTGGAGCGAGATGGGCAAGGTGCACATTTACAACATCAACGAACAGCTGGCGGC 420
consensus_9356#2 ------------------------------------CCCCGCNGGTTAA--GCTGGCGGC 22
* * *
consensus_9356#0 TTCAGGGT-TTTGAAT-TGCAAGTGTGTCGATTTTACGAATAGTA--AGCAAAAAAGCAA 79
consensus_9356#3 TTCGGGGGGTTTCAAT-TGAAAGTGTGCCGATTTTACGAATAGTA--AGCAAAAAAGCAA 81
consensus_9356#1 CATCGACGATAGCAGGGCGCGCAAG-ACGTACCAGCAGAACAAGACCGGTGACGGGGTGA 479
consensus_9356#2 -ATCGACGATAGCAGG-TGCGCAAGTACGTACCAGCAGAACAAGACCGGTGACGGGGTGA 80
* * * * * * *** * * * * * *
consensus_9356#0 GTCTACTCACCATGTCGGAAGCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCG 139
consensus_9356#3 CTCTACTCACCATGTCGGAAGCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCG 141
consensus_9356#1 AGCCAGATTTCACCTTTT---CCGGGCACCAGAAGGAAG-GCTTCGCGATCGAC---TGG 532
consensus_9356#2 AGCCAGATTTCACCTTTT---CCGGGCACCAGAAGGAAGTGCTTCGCGATCGAC---TGG 134
* * ** * *** * **** *** * * **** * * *
consensus_9356#0 AGGACGCCGATCTGGAAAATGCAAGCGACGGGGACGACGATGATGAGGATCTGGAGGAGA 199
consensus_9356#3 AGGACGCCGATCTGGAAAATGCAAGCGACGGGGACGATGATGATGAGGATCTGGAGGAGA 201
consensus_9356#1 TGTCCGACGACTCGTGGCATGCTAGCGACG-GGCGACTGTCGGC-GTGACATTCACATCT 590
consensus_9356#2 TGTCCGACGACGCGTGGCATGCTGGCGACGTGGCGACTGTCGGCTGTGATATTCACATCT 194
* ** *** * **** ****** ** * * ** * *
consensus_9356#0 AGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGATGAGGAGC 259
consensus_9356#3 AGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGATGAGGAGC 261
consensus_9356#1 GGC--GCCCGAACGACAAGGGCGCTTGGGAATGTGGACCAGC-GGCCGCTCGTGGGGA-- 645
consensus_9356#2 GGC--GCCCGAACGACAAGGGCGCGTGG-ATTGTGGACCAGCTGGCCGCTCGTGGG-A-- 248
* * * * * *** ** * * * * * ** ** * *
consensus_9356#0 TGGTGTGCGACGAATCCGCCTACATTATGCTGCACCAGGCACATACCGGAGCACCCTGCC 319
consensus_9356#3 TGGTGTGCGACGAATCCGCGTACATTATGCTGCACCAGGCACATACCGGAGCGCCCTGCC 321
consensus_9356#1 -CACACG-GACTCGGTCGAAGATAT-ACAGTGGAGCCCGAACGAAGCGAATGTGCTCGCC 702
consensus_9356#2 -CACACG-GACTCGGTCGAAGATAT-ACAGTGGAGCCCGAACGAAGCGAATGTGCTCGCC 305
* *** ** * ** * ** * * * ** * ** * * ***
consensus_9356#0 TCAGCTTCGACATTGTGAGCGATCCGC-TCGGCGATGATCGGGAAACGTTCCCCCTGACG 378
consensus_9356#3 TCAGCTTCGACATTGTAAGCGATCCGC-TCGGTGATGATCGGGAAACGTTCCCTCTGACG 380
consensus_9356#1 TCCTGCTCGGTGGACAAATCGATCCGCATTTGGGACTGTCGGGCGGCGCCGCCAAAAGCC 762
consensus_9356#2 TCCTGCTCGGTGGACAAATCGATCCGCATTTGGGACTGTCGGGCGGCGCCCGCCAAAGCC 365
** *** * ******** * * ** ***** ** * *
consensus_9356#0 GCGTATGTCGTCGCCGG-----TACGCAAGCGGCTCGTACGCACGTGAACAG-CGTGATC 432
consensus_9356#3 GCGTATGTCGTCGCCGG-----TACGCAAGCGGCTCGTACGCACGTGAATAG-TGTGATC 434
consensus_9356#1 -TGCATGCTGACGGCGGAG-AATGCGCACGAAAGCGATGTGAATGTAATTAGCTGGAATC 820
consensus_9356#2 -TGCATGCTGACGGCGGAGCAATGCGCACGAAAGCGATGTGAATGTAATTAGCTGGAATC 424
* *** * ** *** * **** * * * * ** * ** * ***
consensus_9356#0 GTAATGAAGATGGCCAATCTGACGCGCACCTCGAAACAGTCGGCCGACGGTGAGTCCGAC 492
consensus_9356#3 GTAATGAAGATGGCCAATCTGACGCGCACCTCGAAACAGTCGGCCGACGGTGAGTCGGAC 494
consensus_9356#1 GTAACGAA--CCGCTCATCGCTAGTGGTGGCGATGACGG-TGTGCTGCAGATATGGGATC 877
consensus_9356#2 GTAACGAA--CCGCTCATCGCTAGTGGTGGCGATGACGGATGTGCTGCAGATATGGGATC 482
**** *** ** *** * * ** * * * * * * *
consensus_9356#0 GACGACGAGG--AGGTGAGCGATAGCGA--GGACGTGAACGAGGACCAAACGCCCATCCT 548
consensus_9356#3 GATGACGAGG--AGGTGAGCGATAGCGA--GGACGTGAACGAGGACCAAACGCCCATCCT 550
consensus_9356#1 TGCGTCAGTTCCAGTCG-AAAACACCGGGTGGCAACGTTTAAGCACCACACC-------- 928
consensus_9356#2 TGCGTCAGTTCCAGTCGCAAAACACCGG-TGGCAACGTTTAAGCACCACACCGACCACAT 541
* * ** * * * ** ** * ** **** **
consensus_9356#0 GACGAGCGTGATGATCAAGCACCCCGGGTGCGTAAACCGGTTGCGTGTGTCCACGTTCGG 608
consensus_9356#3 GACGAGCGTGATGATCAAGCACCCTGGGTGCGTTAACCGGTTGCGTGTGTCC-------- 602
consensus_9356#1 ------------------------------------------------------------
consensus_9356#2 AACGAACGTCGAGTGGCATCCGAAGGAATCGACATCCTGGCGTCAGGTGGTGACCGACGA 601
consensus_9356#0 CAGCTCGCAGTACGTGGCCTCGTGGAGCGAGATGGGCAAGGTGCACATTTACAACATCAA 668
consensus_9356#3 ------------------------------------------------------------
consensus_9356#1 ------------------------------------------------------------
consensus_9356#2 TCAGATTGCCCTGTGGGGATCTTCCGNGGGAGAAGACCGCATGGGGACNCGNATGCGAAA 661
consensus_9356#0 CGAACAGCTGGCGGCCATCGACGATAGCAGGGCGCGCAAGACGTACCAGCAGAACAAGAC 728
consensus_9356#3 ------------------------------------------------------------
consensus_9356#1 ------------------------------------------------------------
consensus_9356#2 TGACCGATCCCGAACTTGACAGGATCTTCCAACCCCAAGTGCTGTNCATCCACCAGGGAA 721
consensus_9356#0 CGGTGACGGGGTGAAGCCAGATTTCACCTTTTCCGGGCACCAGAAGGAAGGCTTCGCGAT 788
consensus_9356#3 ------------------------------------------------------------
consensus_9356#1 ------------------------------------------------------------
consensus_9356#2 CAGAAGCGAGATCAANGAGCTTGGACTGGCATCCCGCACTGAAAGGGTGTGACACTGTCC 781
consensus_9356#0 CGACTGGTGTCCGACGACTCGTGGCATGCTAGCGACGGGCGACTGTCGGCGTGACATTCA 848
consensus_9356#3 ------------------------------------------------------------
consensus_9356#1 ------------------------------------------------------------
consensus_9356#2 AAGGNAACAACANGGGGTCA---------------------------------------- 801
consensus_9356#0 CATCTGGCGCCCGAACGACAAGGGCGCTTGGAATGTGGACCAGCGGCCGCTCGTGGGACA 908
consensus_9356#3 ------------------------------------------------------------
consensus_9356#1 ------------------------------------------------------------
consensus_9356#2 ------------------------------------------------------------
consensus_9356#0 CACGGACTCGGTCGAAGATATACAGTGGAGCCCGAACGAAGCGAATGTGCTCGCCTCCTG 968
consensus_9356#3 ------------------------------------------------------------
consensus_9356#1 ------------------------------------------------------------
consensus_9356#2 ------------------------------------------------------------
consensus_9356#0 CTCGGTGGACAAATCGATCCGCATTTGGGACTGTCGGGCGGCGCCCGCCAAAGCCTGCAT 1028
consensus_9356#3 ------------------------------------------------------------
consensus_9356#1 ------------------------------------------------------------
consensus_9356#2 ------------------------------------------------------------
consensus_9356#0 GCTGACGGCGGAGAATGCGCACGAAAGCGATGTGAATGTAATTAGCTGGAATCGTAACGA 1088
consensus_9356#3 ------------------------------------------------------------
consensus_9356#1 ------------------------------------------------------------
consensus_9356#2 ------------------------------------------------------------
consensus_9356#0 ACCGCTCATCGCTAGTGGTGGCGATGACGGTGTGCTGCAGATATGGGATCTGCGTCAGTT 1148
consensus_9356#3 ------------------------------------------------------------
consensus_9356#1 ------------------------------------------------------------
consensus_9356#2 ------------------------------------------------------------
consensus_9356#0 CCAGTCGAAAACACCGGTGGCAACGTTTAAGCACCACACCGACCACATAACGACCGTCGA 1208
consensus_9356#3 ------------------------------------------------------------
consensus_9356#1 ------------------------------------------------------------
consensus_9356#2 ------------------------------------------------------------
consensus_9356#0 GTGGCATCCGAAGGAATCGACCATCCTGGCGTCCGGTGGTGACGACGATCAGATTGCCCT 1268
consensus_9356#3 ------------------------------------------------------------
consensus_9356#1 ------------------------------------------------------------
consensus_9356#2 ------------------------------------------------------------
consensus_9356#0 GTGGGATCTGTCCGTGGAGAAGGACGATGGGGACGATGCGAATGACGATCCGAACTTGAA 1328
consensus_9356#3 ------------------------------------------------------------
consensus_9356#1 ------------------------------------------------------------
consensus_9356#2 ------------------------------------------------------------
consensus_9356#0 GGATCTTCCACCCCAGCTGCTGTTCATCCACCAGGGACAGAGCGAGATCAAGGAGCTGCA 1388
consensus_9356#3 ------------------------------------------------------------
consensus_9356#1 ------------------------------------------------------------
consensus_9356#2 ------------------------------------------------------------
consensus_9356#0 CTGGCATCCGCAGCTGAAGGGTGTGATACTGTCCACGGCACACAGCGGGTTCAACGTTTT 1448
consensus_9356#3 ------------------------------------------------------------
consensus_9356#1 ------------------------------------------------------------
consensus_9356#2 ------------------------------------------------------------
consensus_9356#0 CCGTACGATAAGCGTTTAATGGCAATAGGAATACATTCACAGGAGCACAACGACGGTGAG 1508
consensus_9356#3 ------------------------------------------------------------
consensus_9356#1 ------------------------------------------------------------
consensus_9356#2 ------------------------------------------------------------
consensus_9356#0 TGCTG 1513
consensus_9356#3 -----
consensus_9356#1 -----
consensus_9356#2 -----
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||