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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9369#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1484 fasta sequence
[CCGCCCACGCGTCCGCGGTTGGTTGTGTGCAACTGGTACAAGTTTTGGTGATCAATTTTTCATCATTTTCTACCGTTTATTAAATTATTGAGTCGCTAAAAATGATTTACTTTTAACGATTCATCCTATCGCCACGCTGCTGCAGTGTTTGAACCGTAGACTTACACGTAAATCTGCATTTAAAACGGTAAGCCCGAAGCAACATTACCCCTCAGTAGCTGTGCGCGCCGAATGACGTGGAGAAAACAGCACAGTCCCAAATACTGCAGCGCTTTTCCGGACGAGTACGGCAAACAAAACTAGATTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGTTTGAAATAACCGACACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATGCTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTGGCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAGGCATCGATTTCGTTCTTCGGCGGCATCGCGATCGTACTGTTCGGCTACCCGCTGATCGGGATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATAAACTTCCTGCGGCGGGTACC-GGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGGACCGTCGACTGGTTGGCGGGCGAATCGGACCGAACGACGGTATGATAGAATTAAGTACCATTTGTTTTTGTTCTTTCTCTCCAACTCCGCTCCGTGATCACGGCGTTCGGCTCACGGTATTTCCCTGGTGGCGGTAGTTAAATGTGTCCGCGGTGTGTGCAATGTTCCACCCGAAACCCTGTTTGCTGGTAGTGTGAACGGCTAGGACT-GGCAAGGGAACGC-AGCAC-CGCTTCCGAAGCTAGGCAATTGTACAGCAGGCAGGCTGATTACTCGAACGTGAGCGTGCTGCCGTTGATGGAAGTATTTTTGCGTTTGCGTTTAGTTAGGTTTACAGGTACCGAACGTACTAGGGGAAGGAGAATACCTTTCCGCTTTCTCGTCTAGTTAAAATCCGTTTTTAGTTTAACAACAACCAGAAAAGTGTAATAACCAAAAACAAAATCCAAAACAAGCTGTATGTATGCACAGAAGCAGAGAAAGTGTGAGAGGAAAAAGCGAGCAGAAAAAAGACAAAGATTTATCAAATCAACTGCTAAGTTAATGTCGCATCGTGGGCGTTGTTTAAATGTTTGTGTTCCTTGTCCGTTGGATCTGTAGGGTGAGGTGTACAAGTGCACGATAGGGTAGCAACAAACAGGGAAGAAAATGCCATTGTTCAAAA-A-ATTATATGTATCATGATTGTGTACTCTACCGCCCACTTCCCTCTCAGCAATATGTACATAAAGCGAATAAATTTTGTATTATCTAAAAAAAAATTTGGAATT]
[+] EMBL BM585633 [CCGCCCACGCGTCCG GGTTGGTTGTGTGCAACTGGTACAAGTTTCGGTGATCAATTTTTCATCATTTTCTACCGTTTATTAAATTATTGAGTCGCTAAAAATGATTCACTATTAACGATCCATGCTATCGCCACGCTGCTGCAGTGTTTGAACCATAGACTTACACGTAAATCTGCATTTAAAACAGTAAGCCCGAAGCAACATTACCCCTCAGTAGCTGTGCCCGCCGAATGACGTGGAGAAAACAGCACAGTCCCAAATACTGCAGCGCTTTTCCGGACGAGTACGGCAAACAAAACTAGATTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGTTTGAAATTACCGACACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATGCTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTGGCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAGGCATCGATTTCGTTCTTCGGCGGTATCGCGATCGTACTGTTCGGCTACCCGCTGATCGGGATGCTCATCGAG ]
[+] EMBL BM610091 [CCGCCCACGCGTCCGCGGTTGGGTGTGTGCAACTGGTACAAGTTTTGGTGATCAATTTTTCATCATTTTCTACCGTTTATTAAATTATTGAGTCGCTAAAAATGATTTACTTTTAACGATTCATCCTATCGCCACGCTGCTGCAGTGTTTGAACCGTAGACTTACACGTAAATCTGCATTTAAAACGGTAAGCCCGAAGCAACATTACCCCTCAGTAGCTGTGCGCGCCGAATGACGTGGAGAAAACAGCACAGTCCCAAATACTGCAGCGCTTTTCCGGACGAGTACGGCAAACAAAACTAGATTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGT ]
[+] EMBL AL692646 [ CCGAGGTT ATTGTGTGC ACTGGTACAAGCTTTGGTGATCAATTTTTCATCATTTTCTACCGTTTATTAAATTATTGAGTCGCTAAAAATGATTTACTTTTAACGATTCATCCTATCGCCACGCTGCTGCAGTGTTTGAACCGTAGACTTACACGTAAATCTGCATTTAAAACGGTAAGCCCGAAGCAACATTACCCCTCAGTAGCTGTGCGCGCCGAATGACGTGGAGAAAACAGCACAGTCCCAAATACTGCAGCGCTTTTCCGGACGAGTACGGCAAACAAAACTAGATTTGGGTGTGATTCAATCGGGCCACTGTAGCGAACAAAATGTTTGAAATAACCGACACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATGCTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTGGCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAGGCATCGATTTCGTTCTTCGGCGGCATCGCGATCGTACTGTTCG ]
[+] EMBL CNS08GYX [ TTGGTTGTGTGCA TGGTACTAGTTTTGGTGATCAATTTTTCATCATTTTCTACCGTTTATTAAATTATTTAGTCGCTAAAAATGATTTACTTTTAACGATTCATCCTATCGCCACGCTGCTGCAGTGTTTGAACCGTAGACTTACACGTAAATCTGCATTTAAAACGGTAAGCCCGAAGCATCATTACCCCTCAGTAGCTGTGCGCGCCGAATGACGTGGAGAAAACAGCACAGTTCCAAATACTGCAGCGCTTTTCCGGACGAGTACGGCAAACAAAACTAGATTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGTTTGAAATAACCGACACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATGCTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTGGCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAGGCATCGATTTCGTTCTTCGGCGGCATTGCGATCGTACTATTCGGCTACCCGCTGATCGGGATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATAAACTTCCTGCGGCGGGTACCGGGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGGACCGTCGACTGGTTGGCGGGCGAATCGGACC ]
[+] EMBL CNS09LOI [ TGTGCA TGGTACTAGTTTTGGTGATCAATTTTTCATCATTTTCTACCGTTTATTAAATTATTTAGTCGCTAAAAATGATTTACTTTTAACGATTCATCCTATCGCCACGCTGCTGCAGTGTTTGAACCGTAGACTTACACGTAAATCTGCATTTAAAACGGTAAGCCCGAAGCATCATTACCCCTCAGTAGCTGTGCGCGCCGAATGACGTGGAGAAAACAGCACAGTTCCAAATACTGCAGCGCTTTTCCGGACGAGTACGGCAAACAAAACTAGATTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGTTTGAAATAACCGACACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATGCTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTGGCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAGGCATCGATTTCGTTCTTCGGCGGCATTGCGATCGTACTATTCGGCTACCCGCTGATCGGGATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATAAACTTCCTGCGGCGGGTACC GGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGGACCGTCGACTGGTTGGCGGGCGAATCGGACCGAACGACGGTATGATAGAATTAAGTACCATTTGTTTTTGTTCTTTCTCTCCAACTCCGCTCCGTGATCACGGCGTTCGGCTCACGGTATTTCCCTGGTGGCGGTAGTTAAATGTGTCCGCGGTGTGTGCAATGTTCCACCCGAAACCCTGTTTGCAAAAAAAGAGAACGGCTA ]
[+] EMBL BM602087 [ ccgGCAACTGGTACAAGTTTTGGTGATCAATTTTTCATCATTTTCTACCGTTTATTAAATTATTGAGTCGCTAAAAATGATTTACTTTTAACGATTCATCCTATCGCCACGCTGCTGCAGTGTTTGAACCGTAGACTTACACGTAAATCTGCATTTAAAACGGTAAGCCCGAAGCAACATTACCCCTCAGTAGCTGTGCGCGCCGAATGACGTGGAGAAAACAGCACAGTCCCAAATACTGCAGCGCTTTTCCGGACGAGTACGGCAAACAAAACTAGATTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGTTTGAAATAACCGACACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATGCTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTGGCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAGGCATCGATTTCGTTCTTCGGCGGCATCGCGATCGTACTGTTCGGCTACCCGCTGATCGGGATGCTCATCGAGATGTACGGGTTCATACTGCTGGTCAGTGGGTTCTTCCCGGTGGCCATAAACTTCCTGCGGC ]
[+] EMBL BX605145 [ GAGTCGCTAAAAATGATTTACTTTTAACGATCCATCCTATCGCCACGCTGCTGCAGTGTTTGAACCGTAGACTTACACGCAAATCTGCATTTAAAACGGTAAGCTCGAAGCAACATTACCCCTCAGTAGCTGTGCGCGCCGAATGACGTGGAGAAAACAGCACAGTCCCAAATACTGCA GCTTTTCCGGACGAGTACGGCAAACAAAACTAGATTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGTTTGAAATTACCGACACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATGCTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTGGCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAGGCATCGATTTCGTTCTTCGGCGGCATCGC ]
[+] EMBL CNS09HPO [ TTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGTTTGAAATTACCGACACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATGCTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTGGCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAGGCATCGATTTCGTTCTTCGGCGGCATCGCGATCGTACTGTTCGGCTACCCGCTGATCGGGATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATAAACTTCCTGCGGCGGGTACC GGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGGACCGTCGACTGGTTGGTGGGCGAATCGGACCGAACGACGGTATGATAGAATTAAGTACCATTTGTTTTTGTTCTTTCTCTCCAACTCCGCTCCGTGATCACGGCGTTCGGCTCACGGTATTTCCCTGGTGGCGGTAGTTAAATGTGTCCGCGGTGTGTGCAATGTTCCACCCGAAACCCTGTTAGCTGGTAGTGTGAACGGCTAGGACT GGCAAGGGAACGC AGCAC CGCTTCCGAAGCTAGGCAATTGTACAGCAGGCAGGCTGATTACTCGAACGTGAGCGTGCTGCCGTTGATGGAAGTATTTTTGCGTTTGCGTTTAGTTAGGTTTACAGGTACCGAACGTACTAGGGGAAGGAGAATACCTTTCCGCTTTCTCGTCTAGTTAAAATCCGTTTTTAGTTTAACAACAACCAGAAAAGTGTAATAACCAAAAACAAAATCCAAAACAAGCTGTATGTATGCACAGAAGCAGAGAAAGTGTGAGAGGAAAAAGCGAGCAGAAAAAAGACAAAGATTTATCAAATCAACTGCTAAGTTAATGTCGCATC ]
[-] EMBL CNS09HPP [ GTGAAGGCATCGATTTCGTTCTTCGGCGGCATCGCGATCGTACTGTTCGGCTACCCGCTGATCGGGATGCTCATCGAGATGTACGGGTTCAAACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATAAACTTCCTGCGGCGGGTACC GGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGGACCGTCGACTGGTTGGTGGGCGAATCGGACCGAACGACGGTATGATAGAATTAAGTACCATTTGTTTTTGTTCTTTCTCTCCAACTCCGCTCCGTGATCACGGCGTTCGGCTCACGGTATTTCCCTGGTGGCGGTAGTTAAATGTGTCCGCGGTGTGTGCAATGTTCCACCCGAAACCCTGTTAGCTGGTAGTGTGAACGGCTAGGACT GGCAAGGGAACGC AGCACGCGCTTCCGAAGCTAGGCAATTGTACAGCAGGCAGGCTGATTACTCGAACGTGAGCGTGCTGCCGTTGATGGAAGTATTTTTGCGTTTGCGTTTAGTTAGGTTTACAGGTACCGAACGTACTAGGGGAAGGAGAATACCTTTCCGCTTTCTCGTCTAGTTAAAATCCGTTTTTAGTTTAACAACAACCAGAAAAGTGTAATAACCAAAAACAAAATCCAAAACAAGCTGTATGTATGCACAGAAGCAGAGAAAGTGTGAGAGGAAAAAGCGAGCAGAAAAAAGACAAAGATTTATCAAATCAACTGCTAAGTTAATGTCGCATCGTGGGCGTTGTTTAAATGTTTGTGTTCCTTGTCCGTTGGATCTGTAGGGTGAGGTGTACAAGTGCACGATAGGGTAGCAACAAACAGGGAAGAAAATGCCATTGTTCAACA A ATTATATGTATCATGATTGTGTACTCTACCGCCCACCTCCCTCTCAGCAATATGTACATAAAGCGAATAAATTTTGTATTATCTAAAAAAAAA ]
[-] EMBL CNS09LOJ [ ATGATAGAATTAAGTACCATTTGTTTTTGTTCTTTCTCTCCAACTCCGCTCCGTGATCACGGCGTTCGGCTCACGGTATTTCCCTGGTGGCGGTAGTTAAATGTGTCCGCGGTGTGTGCAATGTTCCACCCGAAACCCTGTTTGCTGGTAGTGTGAACGGCTAGGACTCGGCAAGGGAATGC GGCGA CGCTTCCGAAGCTAGGCAATTGTACAGCAGGCAGGCTGATTACTCCAACGTGAGCGTGCTGCCGTTGATGGAAGTATTTTTGCGTTTGCGTTTAGTTAGGTTTACAGGTACCGAACGTACTAGGGGAAGGAGAATACCTTTCCGCTTTCTCGTCTAGTTAAAATCCGTTTTTAGTTTAACAACAACCAGAAAAGTGTAGTAACCAAAAACAACATCCAAAACAAGCTGTATGTATGCACAGAAGCAGAGAAAGTGTGAGAGGAAAAAGCGAGCAG TAAAAGACAAAGATTTATCAAATCAACTGCTAAGTTAATGTCGCAACGTGGGCGTTGTTTAAATGTTTGTGTTCCTTGTCCGTTGGATCTGTAGGGTGAGGTGTACAAGTGCACGATAGGGTAGCAACAAACAGGGAAGAAAATGCCATTGTTCAAAAGAGATTATATGTATCATGATTGTGTACTCTACCGCCCACTTCCCTCTCAGCAATATGTACATAAAGCGAATAAATTTTGTATT ]
[-] EMBL CNS08GYY [ CCGCGGTGTGTGCAATGTTCCACCCGAAACCCTGTTTGCTGGTAGTGTGAACGGCTAGAACT GGCAAGGGAATGCGCGCGA CGCTTCCGAAGCTAGGCAATTGTACAGCAGGCAGGCTGATTACTCCAACGTGAGCGTGCTGCCGTTGATGGAAGTATTTTTGCGTTTGCGTTTAGTTAGGTTTACAGGTACCGAACGTACTAGGGGAAGGAGAATACCTTTCCGCTTTCTCGTCTAGTTAAAATCCGTTTTTAGTTTAACAACAACCAGAAAAGTGTAGTAACCAAAAACAACATCCAAAACAAGCTGTATGTATGCACAGAAGCAGAGAAAGTGTGAGAGGAAAAAGCGAGCAG TAAAAGACAAAGATTTATCAAATCAACTGCTAAGTTAATGTCGCAACGTGGGCGTTGTTTAAATGTTTGTGTTCCTTGTCCGTTGGATCTGTAGGGTGAGGTGTACAAGTGCACGATAGGGTAGCAACAAACAGGGAAGAAAATGCCATTGTTCAAAA A ATTATATGTATCATGATTGTGTACTCTACCGCCCACTTCCCTCTCAGCAATATGTACATAAAGCGAATAAATTTTGTATTATCTAGCTCTTTTTTTGGAATT]
consensusID : consensus_9369#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 719 fasta sequence
[CTTTTCCGGACGAGTACGGCAAACAAAACTAGATTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGTTTGAAATAACCGACACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATGCTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTGGCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAGGCATCGATTTCGTTCTTCGGCGGCATCGCGATCGTACTGTTCGGCTACCCGCTGATCGGGATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATAAACTTCCTGCGGCGGGTACCGGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGGACTGTCGACTGGTTGGCGGGCGAATCGGACCGAACGACGGGCAATGGTTACTCCAACTGAAGTAGAAAAGGCACACAATCCCTACTACTGGCCTACTTGACCAGCAATCGAACAAGGTGGAACACGCACTCGAAAGGGATCTACCGGCAGTGACAGTGTGTAAGAGCGAGAGAGAGAGTGTGTGTGTGTGTTTGTGCGTATGCGTGTCTCTGTCTCGTCGTCCTTTTGCTCGACAGTGTGTAGCCTAAAAATAAATGATCACTCGTGCTT]
[+] EMBL BX625148 [CTTTTCCGGACGAGTACGGCAAACAAAACTAGATTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGTTTGAAATAACCGACACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATGCTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTGGCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAGGCATCGATTTCGTTCTTCGGCGGCATCGCGATCGTACTGTTCGGCTACCCGCTGATCGGGATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATAAACTTCCTGCGGCGGGTACCGGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGGACTGTCGACTGGTTGGCGGGCGAATCGGACCGAACGACGGGCAATGGTTACTCCAACTGAAGTAGAAAAGGCACACAATCCCTACTACTGGCCTACTTGACCAGCAATCGAACAAGGTGGAACACGCACTCGAAAGGGATCTACCGGCAGTGACAGTGTGTAAGAGCGAGAGAGAGAGTGTGTGTGTGTGTTTGTGCGTATGCGTGTCTCTGTCTCGTCGTCCTTTTGCTCGACAGTGTGTAGCCTAAAAATAAATGATCACTCGTGCTT]
[+] EMBL BX624687 [ CCACTGTAGCGAACAAAATGTTTGAAATAACCGACACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATGCTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTGGCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAGGCATCGATTTCGTTCTTCGGCGGCATCGCGATCGTACTGTTCGGCTACCCGCTGATCGGGATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATAAACTTCCTGCGGCGGGTACCGGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGGACTGTCGACTGGTTGGCGGGCGAATCGGACCGAACGACGGGCAATGGTTACTCCAACTGAAGTAGAAAAGGCACACAATCCCTACTACTGGCCTACTTGACCAGCAATCGAACAAGGTGGAACACGCACTCGAAAGGGATCTACCGGCAGTGACAGTGTGTAAGAGCGAGAGAGAGAGTGTGTGTGTGTGTTTGTGCGTATGCGTGTCTCTGTCTCGTCGTCCTTTTGCTCGACAGTGTGTAGCCTAAAAATAAATGATCACTCGTGC ]
consensusID : consensus_9369#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 689 fasta sequence
[CCGCCCACGCGTCCGCCCAAATACTGCAGCGCTTTTCCGGACGAGTACGGCAAACAAAACTAGATTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGTTTGAAATAACCGACACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATGCTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTGGCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAGGCATCGATTTCGTTCTTCGGCGGCATCGCGATCGTACTGTTCGGCTACCCGCTGATCGGGATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATAAACTTCCTGCGGCGGGTACCGGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGGACTGTCGACTGGTTGGCGGGCGAATCGGACCGAACGACGGTATGATAGAATTAAGTACCATTTGTTTTTGTTCTTTCTCTCCAACTCCGCTCCGTGATCACGGCGTTCGGCTCACGGTATTTCCCTGGTGGCGGTAGTTAAATGTGTCCGCGGTGTGTGCAATGTTGCACCCGAAACCTGTTTGCTGGTAGTGTGAACGGCTAGGACAG]
[+] EMBL BM616703 [CCGCCCACGCGTCCGCCCAAATACTGCAGCGCTTTTCCGGACGAGTACGGCAAACAAAACTAGATTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGTTTGAAATAACCGACACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATGCTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTGGCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAGGCATCGATTTCGTTCTTCGGCGGCATCGCGATCGTACTGTTCGGCTACCCGCTGATCGGGATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATAAACTTCCTGCGGCGGGTACCGGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGGACTGTCGACTGGTTGGCGGGCGAATCGGACCGAACGACGGTATGATAGAATTAAGTACCATTTGTTTTTGTTCTTTCTCTCCAACTCCGCTCCGTGATCACGGCGTTCGGCTCACGGTATTTCCCTGGTGGCGGTAGTTAAATGTGTCCGCGGTGTGTGCAATGTTGCACCCGAAACCTGTTTGCTGGTAGTGTGAACGGCTAGGACAG]
consensusID : consensus_9369#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 501 fasta sequence
[CCGGATTGATAGCAAAAAAAAAAAAAGGGCGGGTGAAGGCATCGATTTCGTTCTTCGGCGGCATTGCGATCGTACTATTCGGCTACCCGCTGATCGGGATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATAAACTTCCTGCGGCGGGTACCGGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGGACCGTCGACTGGTTGGCGGGCGAATCGGACCGAACGACGGTATGATAGAATTAAGTACCATTTGTTTTTGTTCTTTCTCTCCAACTCCGCTCCGTGATCACGGCGTTCGGCTCACGGTATTTCCCTGGTGGCGGTAGTTAAATGTGTCCGCGGTGTGTGCAATGTTCCACCCGAAACCCTGTTTGCTGGTAGTGTGAACGGCTAGGACTGGCAAGGGAATGCGGCGACGCTTCCGAAGCTAGGCAATTGTACAGCAGGCAGGCTGATTACTCCAACGTGAGCG]
[+] EMBL BM649918 [CCGGATTGATAGCAAAAAAAAAAAAAGGGCGGGTGAAGGCATCGATTTCGTTCTTCGGCGGCATTGCGATCGTACTATTCGGCTACCCGCTGATCGGGATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATAAACTTCCTGCGGCGGGTACCGGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGGACCGTCGACTGGTTGGCGGGCGAATCGGACCGAACGACGGTATGATAGAATTAAGTACCATTTGTTTTTGTTCTTTCTCTCCAACTCCGCTCCGTGATCACGGCGTTCGGCTCACGGTATTTCCCTGGTGGCGGTAGTTAAATGTGTCCGCGGTGTGTGCAATGTTCCACCCGAAACCCTGTTTGCTGGTAGTGTGAACGGCTAGGACTGGCAAGGGAATGCGGCGACGCTTCCGAAGCTAGGCAATTGTACAGCAGGCAGGCTGATTACTCCAACGTGAGCG]
consensusID : consensus_9369#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 154 fasta sequence
[AGCAGAATCGCCCGAGGGNTCTTGGTACAGTTTGGTGATCAATTTTTCATCATTTTCCTTTAACCGGTTTATTAAATTATTGAGTCGCTAAAAATGATTTACTTTTAACGATTCATCCTATCGCCACGCTGCTGCAGTGTTTGAACCGTAGACT]
[+] EMBL AL697264 [AGCAGAATCGCCCGAGGGNTCTTGGTACAGTTTGGTGATCAATTTTTCATCATTTTCCTTTAACCGGTTTATTAAATTATTGAGTCGCTAAAAATGATTTACTTTTAACGATTCATCCTATCGCCACGCTGCTGCAGTGTTTGAACCGTAGACT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9369#1 ------------------------------------------------------------
consensus_9369#2 ------------------------------------------------------------
consensus_9369#3 ------------------------------------------------------------
consensus_9369#0 CCGCCCACGCGTCCGCGGTTGGTTGTGTGCAACTGGTACAAGTTTTGGTGATCAATTTTT 60
consensus_9369#4 ------------------------------------------------------------
consensus_9369#1 ------------------------------------------------------------
consensus_9369#2 ------------------------------------------------------------
consensus_9369#3 ------------------------------------------------------------
consensus_9369#0 CATCATTTTCTACCGTTTATTAAATTATTGAGTCGCTAAAAATGATTTACTTTTAACGAT 120
consensus_9369#4 ------------------------------------------------------------
consensus_9369#1 ------------------------------------------------------------
consensus_9369#2 ------------------------------------------------------------
consensus_9369#3 ------------------------------------------------------------
consensus_9369#0 TCATCCTATCGCCACGCTGCTGCAGTGTTTGAACCGTAGACTTACACGTAAATCTGCATT 180
consensus_9369#4 ------------------------------------------------------------
consensus_9369#1 ------------------------------------------------------------
consensus_9369#2 ------------------------------------------------------------
consensus_9369#3 ------------------------------------------------------------
consensus_9369#0 TAAAACGGTAAGCCCGAAGCAACATTACCCCTCAGTAGCTGTGCGCGCCGAATGACGTGG 240
consensus_9369#4 ------------------------------------------------------------
consensus_9369#1 -------------------------------CTTTTCCGGACGAGTACGGCAAACAAAAC 29
consensus_9369#2 CCGCCCACGCGTCCGCCCAAATACTGCAGCGCTTTTCCGGACGAGTACGGCAAACAAAAC 60
consensus_9369#3 ------------------------------------------------------------
consensus_9369#0 AGAAAACAGCACAGTCCCAAATACTGCAGCGCTTTTCCGGACGAGTACGGCAAACAAAAC 300
consensus_9369#4 ------------------------------------------------------------
consensus_9369#1 TAGATTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGTTTGAAATAACCGAC 89
consensus_9369#2 TAGATTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGTTTGAAATAACCGAC 120
consensus_9369#3 ------------------------------------------------------------
consensus_9369#0 TAGATTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGTTTGAAATAACCGAC 360
consensus_9369#4 ------------------------------------------------------------
consensus_9369#1 ACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATG 149
consensus_9369#2 ACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATG 180
consensus_9369#3 ------------------------------------------------------------
consensus_9369#0 ACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATG 420
consensus_9369#4 ------------------------------------------------------------
consensus_9369#1 CTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTG 209
consensus_9369#2 CTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTG 240
consensus_9369#3 ------------------------------------------------------------
consensus_9369#0 CTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTG 480
consensus_9369#4 ------------------------------------------------------------
consensus_9369#1 GCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAG 269
consensus_9369#2 GCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAG 300
consensus_9369#3 -----CCGGATTGATAGCAAAAAAAAA----------------AAAAGGGCGG-GTGAAG 38
consensus_9369#0 GCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAG 540
consensus_9369#4 ------------------------------------------------------------
consensus_9369#1 GCATCGATTTCGTTCTTCGGCGGCATCGCGATCGTACTGTTCGGCTACCCGCTGATCGGG 329
consensus_9369#2 GCATCGATTTCGTTCTTCGGCGGCATCGCGATCGTACTGTTCGGCTACCCGCTGATCGGG 360
consensus_9369#3 GCATCGATTTCGTTCTTCGGCGGCATTGCGATCGTACTATTCGGCTACCCGCTGATCGGG 98
consensus_9369#0 GCATCGATTTCGTTCTTCGGCGGCATCGCGATCGTACTGTTCGGCTACCCGCTGATCGGG 600
consensus_9369#4 ------AGCAGAATCGCCCGAGGGNTCTTG---GTACAGTTTGGTGATCAATTTTTCATC 51
* ** * * ** * * **** ** ** * * * **
consensus_9369#1 ATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATA 389
consensus_9369#2 ATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATA 420
consensus_9369#3 ATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATA 158
consensus_9369#0 ATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATA 660
consensus_9369#4 ATTTTCCTTTA-----ACCGGTTTATTAAATTATTGAGTCG-------CTAAAAATGATT 99
** ** * * ** **** ** * ** *** * * **
consensus_9369#1 AACTTCCTGCGGCGGGTACCGGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGG 449
consensus_9369#2 AACTTCCTGCGGCGGGTACCGGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGG 480
consensus_9369#3 AACTTCCTGCGGCGGGTACCGGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGG 218
consensus_9369#0 AACTTCCTGCGGCGGGTACCGGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGG 720
consensus_9369#4 TACTTTTAACGATTCATCCTATCGC-------CACGCTG--------CTGCAGTGTTTGA 144
**** ** * * ** ** *** * *** * *
consensus_9369#1 ACTGTCGACTGGTTGGCGGGCGAATCGGACCGAACGACGGGCAATGGTTACTCCAACTGA 509
consensus_9369#2 ACTGTCGACTGGTTGGCGGGCGAATCGGACCGAACGACGG-----------TATGATAGA 529
consensus_9369#3 ACCGTCGACTGGTTGGCGGGCGAATCGGACCGAACGACGG-----------TATGATAGA 267
consensus_9369#0 ACCGTCGACTGGTTGGCGGGCGAATCGGACCGAACGACGG-----------TATGATAGA 769
consensus_9369#4 ACCGTAGACT-------------------------------------------------- 154
** ** ****
consensus_9369#1 AGTAGAAAAGGCACACAATCCCTACTACTGGCCTACTTGACCAGCAATCGAACAAGGTGG 569
consensus_9369#2 ATTAAGTACCATTTGTTTTTGTTCTTTCTCTCCAACT---CCGCTCCGTGATCACGGCGT 586
consensus_9369#3 ATTAAGTACCATTTGTTTTTGTTCTTTCTCTCCAACT---CCGCTCCGTGATCACGGCGT 324
consensus_9369#0 ATTAAGTACCATTTGTTTTTGTTCTTTCTCTCCAACT---CCGCTCCGTGATCACGGCGT 826
consensus_9369#4 ------------------------------------------------------------
consensus_9369#1 AACACGCACTCGAAAGGGATCTACCGGCAGTGACAGTGTGTAAGAGCGAGAGAGAGAGTG 629
consensus_9369#2 TCGGCTCAC------GGTATTTCCCTG--GTGGCGGTAGTTAAA--------------TG 624
consensus_9369#3 TCGGCTCAC------GGTATTTCCCTG--GTGGCGGTAGTTAAA--------------TG 362
consensus_9369#0 TCGGCTCAC------GGTATTTCCCTG--GTGGCGGTAGTTAAA--------------TG 864
consensus_9369#4 ------------------------------------------------------------
consensus_9369#1 TGTGTGTGTGTTTGTGCGTATGCGTGTCTCTGTCTCGTCGTCCT-TTTGCTCGACAGTGT 688
consensus_9369#2 TGTCCGCG-GTGTGTGCA-----ATGTTGCA--CCCGAAACCTG-TTTGCT-GGTAGTGT 674
consensus_9369#3 TGTCCGCG-GTGTGTGCA-----ATGTTCCA--CCCGAAACCCTGTTTGCT-GGTAGTGT 413
consensus_9369#0 TGTCCGCG-GTGTGTGCA-----ATGTTCCA--CCCGAAACCCTGTTTGCT-GGTAGTGT 915
consensus_9369#4 ------------------------------------------------------------
consensus_9369#1 GTAGCCTAAAAATAAATGATCACTCGTGCTT----------------------------- 719
consensus_9369#2 GAACGGCTAGGACAG--------------------------------------------- 689
consensus_9369#3 GAACGGCTAGGACTGGCAAGGGAATGCGGCGACGCTTCCGAAGCTAGGCAATTGTACAGC 473
consensus_9369#0 GAACGGCTAGGACTGGCAAGGGAACGCAGCACCGCTTCCGAAGCTAGGCAATTGTACAGC 975
consensus_9369#4 ------------------------------------------------------------
consensus_9369#1 ------------------------------------------------------------
consensus_9369#2 ------------------------------------------------------------
consensus_9369#3 AGGCAGGCTGATTACTCCAACGTGAGCG-------------------------------- 501
consensus_9369#0 AGGCAGGCTGATTACTCGAACGTGAGCGTGCTGCCGTTGATGGAAGTATTTTTGCGTTTG 1035
consensus_9369#4 ------------------------------------------------------------
consensus_9369#1 ------------------------------------------------------------
consensus_9369#2 ------------------------------------------------------------
consensus_9369#3 ------------------------------------------------------------
consensus_9369#0 CGTTTAGTTAGGTTTACAGGTACCGAACGTACTAGGGGAAGGAGAATACCTTTCCGCTTT 1095
consensus_9369#4 ------------------------------------------------------------
consensus_9369#1 ------------------------------------------------------------
consensus_9369#2 ------------------------------------------------------------
consensus_9369#3 ------------------------------------------------------------
consensus_9369#0 CTCGTCTAGTTAAAATCCGTTTTTAGTTTAACAACAACCAGAAAAGTGTAATAACCAAAA 1155
consensus_9369#4 ------------------------------------------------------------
consensus_9369#1 ------------------------------------------------------------
consensus_9369#2 ------------------------------------------------------------
consensus_9369#3 ------------------------------------------------------------
consensus_9369#0 ACAAAATCCAAAACAAGCTGTATGTATGCACAGAAGCAGAGAAAGTGTGAGAGGAAAAAG 1215
consensus_9369#4 ------------------------------------------------------------
consensus_9369#1 ------------------------------------------------------------
consensus_9369#2 ------------------------------------------------------------
consensus_9369#3 ------------------------------------------------------------
consensus_9369#0 CGAGCAGAAAAAAGACAAAGATTTATCAAATCAACTGCTAAGTTAATGTCGCATCGTGGG 1275
consensus_9369#4 ------------------------------------------------------------
consensus_9369#1 ------------------------------------------------------------
consensus_9369#2 ------------------------------------------------------------
consensus_9369#3 ------------------------------------------------------------
consensus_9369#0 CGTTGTTTAAATGTTTGTGTTCCTTGTCCGTTGGATCTGTAGGGTGAGGTGTACAAGTGC 1335
consensus_9369#4 ------------------------------------------------------------
consensus_9369#1 ------------------------------------------------------------
consensus_9369#2 ------------------------------------------------------------
consensus_9369#3 ------------------------------------------------------------
consensus_9369#0 ACGATAGGGTAGCAACAAACAGGGAAGAAAATGCCATTGTTCAAAAAATTATATGTATCA 1395
consensus_9369#4 ------------------------------------------------------------
consensus_9369#1 ------------------------------------------------------------
consensus_9369#2 ------------------------------------------------------------
consensus_9369#3 ------------------------------------------------------------
consensus_9369#0 TGATTGTGTACTCTACCGCCCACTTCCCTCTCAGCAATATGTACATAAAGCGAATAAATT 1455
consensus_9369#4 ------------------------------------------------------------
consensus_9369#1 -----------------------------
consensus_9369#2 -----------------------------
consensus_9369#3 -----------------------------
consensus_9369#0 TTGTATTATCTAAAAAAAAATTTGGAATT 1484
consensus_9369#4 -----------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||