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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9375#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1599 fasta sequence
[GCGTAGTGCCGATACAGTGAAAAAAGTTTATTTCATGTGCAGTTAAAATGTCTCAATTCAAGAAAACCGATAGTAA-AATCTACGCAAAAACCGCGACGGTACTGTCGCCGGACACAATATATTGGAAAAAGCTAGGGGTGCCCACGCTAGTAAAAGAGTTCGGTGCCATCGACTACATCGACTTTTGTCCGGTAGAACCGTACCTGTTCGCGGTGACTGCCTCGGTCCGCGTGCA-GATCTACAACCCCATTACAAAGCTCGTGGTGAAAAACATAACAAAGTTCCAAGAGGCAGCCCACGGCGGATCGTTTCGCAAGGATGGCAATCTGCTGGTGGCGGGCGACGAACTCGGCAAAGTGCGCCTGTTCGATGTGACCACGCGCACGATCCTACGATACTTCGAGGGTCGGGTACTGGGATATTGCGACGGAAAACCATCTGCACACGTTCACCGGCCACGAGGACTACATTCGGGCCGGTTGCACCAGCCCGGTCAGCCCGAACATAATCCTGTCCGGTGGGTATGACCGTAAAATCCGCATGTACGATACGCGTGTGAAAGAGTGCGTCATGACCGTGGACCACGGGCAGCCGGTAGAATCGTTGGTGTTTCTGCCGAGCGGTGGCATCTTCATCAGTGCCGGCGGTACCTCGGTGAACGTGT-ACGATGCCCTGTCGGGCGGCCGGCAGCTGGCCCAGCTCTCCCAGCACCACAAAACGGTCACCTGCCTGCAGCTGGCCAGCGATGGCAAGCGTCTGTTTTCCGGCAGCTTGGACCGGCACGTGAAGGTGTACGACATAGCCACCTACCAGGTGGTGCACACGATCGACAGCTCGAACGCGATTCTGAGCCTCGGCATCTCGAA-GAACGACGACACGCTCGTGACGGGCATGGTGGACGGTTTGATCGCCATCTATCGGCGCGAGGGCGATCCGCGGGACGAGCAGCCGACCCAGCGGGTGCGCAAGGG-CCACCACCAGCACATCTTCGAGCCGGCCGACCAGCAGGTTGAGGAGTTCAAGTTCGTGCGCTACGAGGGGCACGATCGGGCACTGCGTAAGTACGAGTACAAGAAGGCACTGGATGCGGTCATGGCGGCAAAGGTAAGGGGAATGTGGCCGGAGAAAACCGTGGCCCTCATTAAGGAGCTAATCCGGCGGAAGGGTCTGCACCGGGCGCTGGACGATCGTTCGCCCGAGTCGTTGGTGCACTTCATCAACTTTCTCACGCGCCACATCGGCGACTATCGGTTCACGCCCGTGCTGATCGACGCGGGCAACATTCTGCTGGACGTGTACGAAGATTCGCTCGAAAAGTTTGCCGGCACGATCGTGGGCAAAGCGTTCGTGACGCTCGCGAACAAGCTGCAGACGGAGGAGCAGCTGGTGCAGGAGTTCCTGAACCTGCAGGGTATGCTGGACATGATTTCGGTGGCGGCGGATACGGCGGAACCGGACACCGTGGACGATGCGATCGCACCGTACGACGCCTCGAACAAGGCGAAGAATCAAACGGTCATATCGGTCGACTGACCGGAGCGTGTTTGCACGGGTAGGGATAAACAACGCAAGACAAAATAGAAACTATCAACCCATACA]
[+] EMBL CNS0900E [GCGTAGTGCCGATACAGTGAAAAAAGTTTATTTCATGTGCAGTTAAAATGTCTCAATTCAAGAAAACCGATAGTAA AATCTACGCAAAAACCGCGACGGTACTGTCGCCGGACACAATATATTGGAAAAAGCTAGGGGTGCCCACGCTAGTAAAAGAGTTCGGTGCCATCGACTACATCGACTTTTGTCCGGTAGAACCGTACCTGTTCGCGGTGACTGCCTCGGTCCGCGTGCA GATCTACAACCCCATTACAAAGCTCGTGGTGAAAAACATAACAAAGTTCCAAGAGGCAGCCCACGGCGGATCGTTTCGCAAGGATGGCAATCTGCTGGTGGCGGGCGACGAACTCGGCAAAGTGCGCCTGTTCGATGTGACCACGCGCACGATCCTACGATACTTCGAGGGTCGGGTACTGGGATATTGCGACGGAAAACCATCTGCACACGTTCACCGGCCACGAGGACTACATTCGGGCCGGTTGCACCAGCCCGGTCAGCCCGAACATAATCCTGTCCGGTGGGTATGACCGTAAAATCCGCATGTACGATACGCGTGTGAAAGAGTGCGTCATGACCGTGGACCACGGGCAGCCGGTAGAATCGTTGGTGTTTCTGCCGAGCGGTGGCATCTTCATCAGTGCCGGCGGTACCTCGGTGAACGTGT ACGATGCCCTGTCGGGCGGCCGGCAGCTGGCCCAGCTCTCCCAGCACCACAAAACGGTCACCTGCCTGCAGCTGGCCAGCGATGGCAAGCGTCTGTTTTCCGGCAGCTTGGACCGGCACGTGAAGGTGTACGACATAGCCACCTACCAGGTGGTGCACACGATCGACAGCTCGAACGCGATTCTGAGCCTCGGCATCTCGAA GAACGACGACACGCTCGTGACGGGCATGGTGGACGGTTTGATCGCCATCTATCGGCGCGAGGGCGATCCGCGGGACGAGCAGCCGACCCAGCGGGTGCGCAAGGGCCCACCACCAGCACATCTTCGAG ]
[+] EMBL CNS09HBZ [ AAAAAAGTTTATTTCATGTGCAGTTAAAATGTCTCAATTCAAGAAAACCGATAACAACCATCTACGCAAAAACCGCGACGGTACTGTCGCCGGACACAATATATTGGAAAAAGCTAGGGGTGCCCACGCTAGTAAAAGAGTTCGGTGCCATCGACTACATCGACTTTTGTCCGGTAGAACCGTACCTGTTCGCGGTGACTGCCTCGGTCCGCGTGCACGATCTACAACCCCATTACAAAGCTCGTGGTGAAAAACATAACAAAGTTCCAAGAGGCAGCCCACGGCGGATCGTTTCGCAAGGA ]
[-] EMBL CNS08MEJ [ GGTGGCATCTTCATCAGTGCCGGCGGTACCTCGGTGAACGTGTAACGAT TCCTGTCGGGCGGCCGGCAGCTGGCCCAGCTCTCCCAGCACCACAAAACGGTCACCTGCCTGCAGCTGGCCAGCGATGGCAAGCGTCTGTTTTCCGGCAGCTTGGACCGGCACGTGAAGGTGTACGACATAGCCACCTACCAGGTGGTGCACACGATCGACAGCTCGAACGCGATTCTGAGCCTCGGCATCTCGAA GAACGACGACACGCTCGTGACGGGCATGGTGGACGGTTTGATCGCCATCTATCGGCGCGAGGGCGATCCGCGGGACGAACAGCCGACCCAGCGGGTGCGCAAGGG CCACCACCAGCACATCTTCGAGCCGGCCGACCAGCAGGTTGAGGAGTTCAAGTTCGTGCGCTACGAGGGGCACGATCGGGCACTGCGTAAGTACGAGTACAAGAAGGCACTGGATGCGGTCATGGCGGCAAAGGTAAGGGGAATGTGGCCGGAGAAAACCGTGGCCCTCATTAAGGAGCTAATCCGGCGGAAGGGTCTGCACCGGGCGCTGGACGATCGTTCGCCCGAGTCGTTGGTGCACTTCATCAACTTTCTCACGCGCCACATCGGCGACTATCGGTTCACGCCCGTGCTGATCGACGCGGGCAACATTCTGCTGGACGTGTACGAAGATTCGCTCGAAAAGTTTGCCGGCACGATCGTGGGCAAAGCGTTCGTGACGCTCGCGAACAAGCTGCAGACGGAGGAGCAGCTGGTGCAGGAGTTCCTGAACCTGCAGGGTATGCTGGACATGATTTCGGTGGCGGCGGATACGGCGGAACCGGACACCGTGGACGATGCGATCGCACCGTACGACGCCTCGAACAAGGCGAAGAATCAAACGGTCATATCGGTCGACTGACCGGAGCGTGTTTGCACGGGTAGGTATA ]
[-] EMBL CNS0900F [ GGCAGCTGGCCCAGCTCTCCCAGCACCACAAAACGGTCACCTGCCTGCAGCTGGCCAGCGATGGCAAGCGTCTGTTTTCCGGCAGCTTGGACCGGCACGTGAAGGTGTACGACATAGCCACCTACCAGGTGGTGCACACGATCGACAGCTCGAACGCGATTCTGAGCCTCGGCATCTCGAA GAACGACGACACGCTCGTGACGGGCATGGTGGACGGTTTGATCGCCATCTATCGGCGCGAGGGCGATCCGCGGGACGAGCAGCCGACCCAGCGGGTGCGCAAGGG CCACCACCAGCACATCTTCGAGCCGGGCGACCAGCAGGTGGAGGAGTTCAAGTTCGTGCGCTACGAAGGGCACGATCGGGCACTGCGTAAGTACGAGTACAAGAAGGCACTGGATGCGGTCATGGCGGCAAAGGTAAGGGGAATGTGGCCGGAGAAAACCGTGGCCCTCATCAAGGAGCTAATCCGGCGGAAGGGTCTGCACCGGGCGCTGGACGATCGTTCGCCCGAGTCGTTGGTGCACTTCATCAACTTTCTCACGCGCCACATCGGCGACTATCGGTTCACGCCCGTGCTGATCGACGCGGGCAACATTCTGCTGGACGTGTACGAAGATTCGCTCGAAAAGTTTGCCGGCACGATCGTGGGCAAAGCGTTCGTGACGCTCGCGAACAAGCTGCAGACGGAGGAGCAGCTGGTGCAGGAGTTCCTGAACCTGCAGGGTATGCTGGACATGATTTCGGTGGCGGCGGATACGGCGGAACCGGACACCGTGGACGATGCGATCGCACCGTACGACGCCTCGAACAAGGCGAAGAATCAAACGGTCATATCGGTCGACTGACTGGAGCGTGTTTGCACGGGTAGGGATAAACAACGCAAGACAAAATAGAAACTATCAACCCATACA]
[+] EMBL BX628765 [ gaccgtaaaATC CGAATGTACGACGACACGCTCGTGACGGGCATGGTGGACGGTTTGATCGCCATCTATCGGCGCGAGGGCGATCCGCGGGACGAGCAGCCGACCCAGCGGGTGCGCAAGGG CCACCACCAGCACATCTTCGAGCCGGCCGACCAGCAGGTGGAGGAGTTCAAGTTCGTGCGCTACGAGGGGCACGATCGGGCACTGCGTAAGTACGAGTACAAGAAGGCACTGGATGCGGTCATGGCGGCCAAGGTAAGGGGAATGTGGCCGGAGAAAACCGTGGCCCTCATCAAGGAGCTAATCCGGCGGAAGGGTCTGCACCGGGCGCTGGACGATCGTTCGCCCGAGTCGTTGGTGCACTTCATCAACTTTCTCACGCGCCACATCGGCGACTATCGGTTCACGCCCGTGCTGATCGACGCGGGCAACATTCTGCTGGACGTGTACGAAGATTCGCTCGAAAAGTTTGCCGGCACGATCGTGGGCAAAGCGTTCGTGACGCTCGCGAACAAGCTGCAGACGGAGGAGCAGCTGGTGCTGGAGTTCCTGAACCTGCAGGGTATGCTGGACATGATTTCGGTGGCGGCGGATACGGCGGAACCGGACACCGTGGACGATGCGATCGC ]
[-] EMBL CNS09BFM [ CGACGAAACGCTCGTGACGGGCATGGTGGACGGTTTGATCGCCATCTATCGGCGCGAGGGCGATCCGCGGGACGAACAGCCGACCCAGCGGGTGCGCAAGGG CCACCACCAGCACATCTTCGAGCCGGCCGACCAGCAGGTTGAGGAGTTCAAGTTCGTGCGATACGAGGGGCACGATCGGGCA TGCGTAAGTACGAGTACAAGAAGGCACTGGATGCGGTCATGGCGGCAAAGGTAAGGGGAATGTGGCCGGAGAAAACCGTGGCCCTCATTAAGGAGCTAATCCGGCGGAAGGGTCTGCACCGGGCGCTGGACGATCGTTCGCCCGAGTCGTTGGTGCACTTCATCAACTTTCTCACGCGCCACATCGGCGACTATCGGTTCACGCCCGTGCTGATCGACGCGGGCAACATTCTGCTGGACGTGTACGAAGATTCGCTCGAAAAGTTTGCCGGCACGATCGTGGGCAAAGCGTTCGTGACGCTCGCGAACAAGCTGCAGACGGAGGAGCAGCTGGTGCAGGAGTTCCTGAACCTGCAGGGTATGCTGGACATGATTTCGGTGGCGGCGGATACGGCGGAACCGGACACCGTGGACGATGCGATCGCACCGTACGACGCCTCGAACAAGGCGAAGAATCAAACGGTCATATCGGTCGACTGACCGGAGCGTG TTGCACGGGTA ]
[-] EMBL CNS09EAG [ CGGTCATGGCGGCAAAGGTAAGGGGAATGTGGCCGGAGAAAACCGTGGCCCCCATTAAGGAGCTAATCCGGCGGAAGGGTCTGCACCGGGCGCTGGACGATCGTTCGCCCGAGTCGTTGGTGCACTTCATCAACTTTCTCACGCGCCACATCGGCGACTATCGGTTCACGCCCGTGCTGATCGACGCGGGCAACATTCTGCTGGACGTGTACGAAGATTCGCTCGAAAAGTTTGCCGGCACGATCGTGGGCAAAGCGTTCGTGACGCTCGCGAACAAGCTGCAGACGGAGGAGCAGCTGGTGCAGGAGTTCCTGAACCTGCAGGGTATGCTGGACATGATTTCGGTGGCGGCGGATACGGCGGAACCGGACACCGTGGACGATGCGATCGCACCGTACGACGCCTCGAACAAGGCGAAGAATCAAACGGTCATATCGGTCGACTGACCGGAGCGTGTTTGCACGGGTAGGGATAAACAA ]
[-] EMBL CNS08PND [ TAATCCGGCGGAAGGGTCTGCACCGGGCGCTGAACGATCGTTCGCCCGAGTCGTTGGTGAACTTCATCAACTTTTTAACGCGCCACATCGGCGACTATCGGTTAACGCCCGTGCTGATCGACGCGGGCAACATTCTGCTGGACGTGTACGAAAATTCGCTCGAAAAGTTTGCCGGCACGATCGTGGGCAAAGCGTTCGTAACGCTCGCGAACAAGCTGCAGACGGAGGAGCAGCTGGTGCAGGAGTTCCTGAACCTGAAGGGTATGCTGAACATGATTTCGGTGGCGGCGGATACGGCGGAACCGGACACCGTGGACGATGCGATCGCACCGTACGACGCCTCGAACAAGGCGAAGAATCAAACGGTCATATCGGTCGACTAACTGGAGCGTGTTTGCACGGGTAGGGATAAACAACGCAAGA ]
[-] EMBL CNS09HC0 [ TGCTGATCGACGCGGGCAACATTCTGCTGGACGTGTACGAAGATTCGCTCGAAAAGTTTGCCGGCACGATCGTGGGCAAAGCGTTCGTGACGCTCGCGAACAAGCTGCAGACGGAGGAGCAGCTGGTGCAGGAGTTCCTGAACCTGCAGGGTATGCTGGACATGATTTCGGTGGCGGCGGATACGGCGGAACCGGACACCGTGGACGATGCGATCGCACCGTACGACGCCT ]
consensusID : consensus_9375#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 965 fasta sequence
[CCGAAACGAACGCACGTGCTGGCGTAGGTGCCGATACAGTGAAA-AAAGTTTATTTCATGTGCAGTTAAAATGTCTCAATTCAAGAAAACCGATAGTAAAATCTACGCAAAAACCGCGACGGTACTGTCGCCGGACACAATCTATTGGAAAAAGCTAGGGGTGCCCACGCTAGTAAAAGAGTTCGGTGCCATCGATTACATCGACTTCTGTCCGGTAGAACCGTACCTGTTCGCG-GTGACTGCTTCGGTCCGCGTGCAGATCTACAACCCCATTACAAAGCTCGTGGTGAAAAACATAACAAAGTTCCAAGAGGCAGCCCACGGCGGAACGTTTCGCAAGGATGGCAATCTGCTGGTGGCGGGCGACGAACTCGGCAAAGTGCGCCTGTTCGATGTGACCACGCGCACGATCCTACGATACTTCGAGGGTCACAAGGCTCCGGTGCATCGCACGTTCTTTACCGCGGACGGACACCATGTAGCGAGCTTCTCGGACGATCGTACCGTCGGGTACTGGGATATTGCGACGGAAAACCATCTGCACACGTTCACCGGCCACGAGGACTACATACGGGCCGGTTGCACCAGCCCGGTCAGCCCGAACATAATCCTGTCCGGCGGGTATGACCGTAAAATCCGAATGTACGATACGCGTGTGAAAGAGTGCGTCATGACCGT-GGACCACGGGCAACCGGTAGAATCGTTGGTGTTTCTGCCGAGCGGTGGCATCTTCATCAGTGCCGGCGGTACCTCGGTGAACGTGTACGATGCCCTGTCGGGCGGCCGGCAGCTGGCCCAGCTCTCCCAGCACCACAAAACGGTCACCTGCCTGCAGCTGGCCAGCGATGGCAAGCGTCTGTTTTCCGGCAGCTTGGACCGGCACGTGAAGGTGTACGACATAGCCACCTACCAGGTGGTGCACACGATCGACAGCTCGAACGCGATTCTGAGCCTCGGCATCTCGAA]
[+] EMBL BM640296 [CCGAAACGAACGCACGTGCTGGCGTAGGTGCCGATACAGTGAAACAAAGTTTATTTCATGTGCAGTTAAAATGTCTCAATTCAAGAAAACCGATAGTAAAATCTACGCAAAAACCGCGACGGTACTGTCGCCGGACACAATCTATTGGAAAAAGCTAGGGGTGCCCACGCTGGTAAAAGAGTTCGGTGCCATCGACTACATCGACTTCTGTCCGGTAGAACCGTACCTGTTCGCG GTGACTGCCTCGGTCCGCGTGCAGATCTACAACCCCATTACAAAGCTCGTGGTGAAAAACATAACAAAGTTCCAAGAGGCAGCCCACGGCGGATCGTTTCGCAAGGATGGCAATCTGCTGGTGGCGGGCGACGAACTCGGCAAAGTGCGCCTGTTCGATGTGACCACTCGCACGATCCTACGATACTTCGAGGGTCACAAGGCTCCGGTGCATCGCACGTTCTTTACCGCGGACGGGCACCATGTAGCGAGCTTCTCGGACGATCGTACCGTCGGGTACTGGGATATTGCGACGGAAAACCATCTGCACACGTTCACCGGCCACGAGGACTACATTCGGGCCGGTTGCACCAGCCCGGTCAGCCCGAACATAATCCTGTCCGGCGGGTATGACCGTAAAATCCGAATGTACGATACGCGTGTGAAAGAGTGCGTCATGACCGTGGGACCACGGGCAGCCGGTAAAATCGTTGGTGTTT ]
[+] EMBL CNS09EAF [ CACGTGCTGGCGTAGGTGCCGATACAGTGAAA AAAGTTTATTTCATGTGCAGTTAAAATGTCTCAATTCAAGAAAACCGATAGTAAAATCTACGCAAAAACCGCGACGGTACTGTCGCCGGACACAATCTATTGGAAAAAGCTAGGGGTGCCCACGCTAGTAAAAGAGTTCGGTGCCATCGATTACATCGACTTCTGTCCGGTAGAACCGTACCTGTTCGCG GTGACTGCTTCGGTCCGCGTGCAGATCTACAACCCCATTACAAAGCTCGTGGTGAAAAACATAACAAAGTTCCAAGAGGCAGCCCACGGCGGAACGTTTCGCAAGGATGGCAATCTGCTGGTGGCGGGCGACGAACTCGGCAAAGTGCGCCTGTTCGATGTGACCACGCGCACGATCCTACGATACTTCGAGGGTCACAAGGCTCCGGTGCATCGCACGTTCTTTACCGCGGACGGACACCATGTAGCGAGCTTCTCGGACGATCGTACCGTCGGGTACTGGGATATTGCGACGGAAAACCATCTGCACACGTTCACCGGCCACGAGGACTACATACGGGCCGGTTGCACCAGCCCGGTCAGCCCGAACATAATCCTTTCCGGCGGGTTTGA ]
[+] EMBL CNS09BFL [ CTGTCGCCGGACACAATCTATTGGAAAAAGCTAGGGGTGCCCACGCTAGTAAAAGAGTTCGGTGCCATCGATTACATCGACTTCTGTCCGGTAGAACCGTACCTGTTCGCGCGTGACTGCTTCGGTCCGCGTGCAGATCTACAACCCCATTACAAAGCTCGTGGTGAAAAACATAACAAAGTTCCAAGAGGCAGCCCACGGCGGAACGTTTCGCAAGGATGGCAATCTGCTGGTGGCGGGCGACGAACTCGGCAAAGTGCGCCTGTTCGATGTGACCACGCGCACGATCCTACGATACTTCGAGGGTCACAAGGCTCCGGTGCATCGCACGTTCTTTACCGCGGACGGACACCATGTAGCGAGCTTCTCGGACGATCGTACCGTCGGGTACTGGGATATTGCGACGGAAAACCATCTGCACACGTTCACCGGCCACGAGGACTACATACGGGCCGGTTGCACCAGCCCGGTCAGCCCGAACATAATCCTGTCCGGCGGGTATGACCGTAAAATCCGAATGTACGATACGCGTGTGAAAGAGTGCGTCATGACCGT GGACCACGGGCAACCGGTAGAATCGTTGGTGTTTCTGCCGAGCGGTGGCATCTTCATC ]
[+] EMBL CNS08MEI [ tCTATTAAAATATTTCGGTGCCATCGATTACATCGACTTCTGTCCGGTAGAACCGTACCTGTTCGCG GTGACTGCTTCGGTCCGCGTGCAGATCTACAACCCCATTACAAAGCTCGTGGTGAAAAACATAACAAAGTTCCAAGAGGCAGCCCACGGCGGAACGTTTCGCAAGGATGGCAATCTGCTGGTGGCGGGCGACGAACTCGGCAAAGTGCGCCTGTTCGATGTGACCACGCGCACGATCCTACGATACTTCGAGGGTCACAAGGCTCCGGTGCATCGCACGTTCTTTACCGCGGACGGACACCATGTAGCGAGCTTCTCGGACGATCGTACCGTCGGGTACTGGGATATTGCGACGGAAAACCATCTGCACACGTTCACCGGCCACGAGGACTACATACGGGCCGGTTGCACCAGCCCGGTCAGCCCGAACATAATCCTGTCCGGCGGGTATGACCGTAAAATCCGAATGTACGATACGCGTGTAAAAGAGTGCGTAATGACCGT GGACCACGGGCAACCGGTAGAATCGTTGGTGTTTCTGCCGAGCGGTGGCATCTTCATCAGTGCCGGCGGTACCTCGGTGAACGTGTACGATGCCCTGTCGGGCGGCCGGCAGCTGGCCCAGCTCTCCCAGCACCACAAAACGGTCACCTGCCTGCAGCTGGCCAGCGATGGCAAGCGTCTGTTTTCCGGCAGCTTGGACCGGCACGTGAAGGTGTACGACATAGCCACCTACCAGGTGGTGCACACGATCGACAGCTCGAACGCGATTCTGAGCCTCGGCATCTCGAA]
consensusID : consensus_9375#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 793 fasta sequence
[AAAGTTTATTTCATGTGCAGTTAAAATGTCTCAATTCAAGAAAACCGATAGTAAAATCTACGCAAAAACCGCGACGGTACTGTCGCCGGACACAATATATTGGAAAAAGCTAGGGGTGCCCACGCTAGTAAAAGAGTTCGGTGCCATCGACTACATCGACTTTTGTCCGGTAGAACCGTACCTGTTCGCGGTGACTGCCTCGGTCCGCGTGCAGATCTACAACCCCATTACAAAGCTCGTGGTGAAAAACATAACAAAGTTCCAAGCGTCTGTTTTCCGGCAGCTTGGACCGGCACGTGAAGGTGTACGACATAGCCACCTACCAGGTGGTGCACACGATCGACAGCTCGAACGCGATTCTGAGCCTCGGCATCTCGAAGAACGACGACACGCTCGTGACGGGCATGGTGGACGGTTTGATCGCCATCTATCGGCGCGAGGGCGATCCGCGGGACGAGCAGCCGACCCAGCGGGTGCGCAAGGGCCACCACCAGCACATCTTCGAGCCGGCCGACCAGCAGGTGGAGGAGTTCAAGTTCGTGCGCTACGAAGGGCACGATCGGGCACTGCGTAAGTACGAGTACAAGAAGGCACTGGATGCGGTCATGGCGGCAAAGGTAAGGGGAATGTGGCCGGAGAAAACCGTGGCCCTCATCAAGGAGCTAATCCGGCGGAAGGGTCTGCACCGGGCGCTGGACGATCGTTCGCCCGAGTTGTTGGTGCACTTCATCAACTTTCTCACGCGCCACATCGGCGACTATCGGTTCACGCCCGTACTGATCGACGCGGGCAA]
[+] EMBL CNS08PNC [AAAGTTTATTTCATGTGCAGTTAAAATGTCTCAATTCAAGAAAACCGATAGTAAAATCTACGCAAAAACCGCGACGGTACTGTCGCCGGACACAATATATTGGAAAAAGCTAGGGGTGCCCACGCTAGTAAAAGAGTTCGGTGCCATCGACTACATCGACTTTTGTCCGGTAGAACCGTACCTGTTCGCGGTGACTGCCTCGGTCCGCGTGCAGATCTACAACCCCATTACAAAGCTCGTGGTGAAAAACATAACAAAGTTCCAAGCGTCTGTTTTCCGGCAGCTTGGACCGGCACGTGAAGGTGTACGACATAGCCACCTACCAGGTGGTGCACACGATCGACAGCTCGAACGCGATTCTGAGCCTCGGCATCTCGAAGAACGACGACACGCTCGTGACGGGCATGGTGGACGGTTTGATCGCCATCTATCGGCGCGAGGGCGATCCGCGGGACGAGCAGCCGACCCAGCGGGTGCGCAAGGGCCACCACCAGCACATCTTCGAGCCGGCCGACCAGCAGGTGGAGGAGTTCAAGTTCGTGCGCTACGAAGGGCACGATCGGGCACTGCGTAAGTACGAGTACAAGAAGGCACTGGATGCGGTCATGGCGGCAAAGGTAAGGGGAATGTGGCCGGAGAAAACCGTGGCCCTCATCAAGGAGCTAATCCGGCGGAAGGGTCTGCACCGGGCGCTGGACGATCGTTCGCCCGAGTTGTTGGTGCACTTCATCAACTTTCTCACGCGCCACATCGGCGACTATCGGTTCACGCCCGTACTGATCGACGCGGGCAA]
consensusID : consensus_9375#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 705 fasta sequence
[ATCGCCGAGTTACATGTAGCTGGCCCAGCTCTCCCAGCACACAAAACGGTCACCTGCCTGCAGCTGGCCAGCGATGGCAAGCGTCTGTTTTCCGGCAGCTTGGACCGGCACGTGAAGGTGTACGACATAGCCACCTACCAGGTGGTGCACACGATCGACAGCTCGAACGCGATTCTGAGCCTCGGCATCTCGAAGAACGACGACACGCTCGTGACGGGCATGGTGGACGGTTTGATCGCCATCTATCGGCGCGAGGGCGATCCGCGGGACGAGCAGCCGACCCAGCGGGTGCGCAAGGGCCACACCAGCACATCTTCGCAGCCGGCCGACCAGCAGGTGGAGGAGTTCAAGTTCGTGCGCTACGAGGGGCACGATCGGGCACTGCGTAATGTACGAGTACAAGAAGGCACTGGATGCGGTCATGGCGGCCAAGGTAAGGGGAACTGTGGCCGGAGAAAACCGTGGCCCTCATCAAGGAGCTAATCCGGCGGAAGGGTCTGCACCGGGACGCTGGACGATCGTACGCCCGAGTCGATGGTAGCACTTCATCAACTTTCTCACAGCGCACATCGGGCGACTATCGGTTACACGCCCGTGCTGATCGACGCGGGCAACAATNCCTGCTGGACGTGTACGAAAGATTCGCTCCGANAAAGTTNGCGGGCCNCNANCGTGGGCAAAGCGTACGNGACNCCTCGCAGAANA]
[+] EMBL AL934698 [ATCGCCGAGTTACATGTAGCTGGCCCAGCTCTCCCAGCACACAAAACGGTCACCTGCCTGCAGCTGGCCAGCGATGGCAAGCGTCTGTTTTCCGGCAGCTTGGACCGGCACGTGAAGGTGTACGACATAGCCACCTACCAGGTGGTGCACACGATCGACAGCTCGAACGCGATTCTGAGCCTCGGCATCTCGAAGAACGACGACACGCTCGTGACGGGCATGGTGGACGGTTTGATCGCCATCTATCGGCGCGAGGGCGATCCGCGGGACGAGCAGCCGACCCAGCGGGTGCGCAAGGGCCACACCAGCACATCTTCGCAGCCGGCCGACCAGCAGGTGGAGGAGTTCAAGTTCGTGCGCTACGAGGGGCACGATCGGGCACTGCGTAATGTACGAGTACAAGAAGGCACTGGATGCGGTCATGGCGGCCAAGGTAAGGGGAACTGTGGCCGGAGAAAACCGTGGCCCTCATCAAGGAGCTAATCCGGCGGAAGGGTCTGCACCGGGACGCTGGACGATCGTACGCCCGAGTCGATGGTAGCACTTCATCAACTTTCTCACAGCGCACATCGGGCGACTATCGGTTACACGCCCGTGCTGATCGACGCGGGCAACAATNCCTGCTGGACGTGTACGAAAGATTCGCTCCGANAAAGTTNGCGGGCCNCNANCGTGGGCAAAGCGTACGNGACNCCTCGCAGAANA]
consensusID : consensus_9375#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 294 fasta sequence
[CCAGGTTAAGCCACGGCGGATCGTTCGCAAGATGGCATCTGCTGGTGGCGGGCGACGAACTCGGCAAAGTGCGCCTGTTCGATGTGACCACTCGCACGATCCTACGATACTTCGAGGGTCACAAGGCTCCGGTGCATCGCACGTTCTTTACCGCGGACGGGCACCATGTAGCGAGCTTCTCGGACGATCGTACCGTCGGGTACTGGGATATTGCGACGGAAAACCATCTGGACACGTTCACCGGCACGAGGACTACATTCGGGCCGGTTGGACCAGCCGGGTCAGCCGAACATA]
[+] EMBL AL693189 [CCAGGTTAAGCCACGGCGGATCGTTCGCAAGATGGCATCTGCTGGTGGCGGGCGACGAACTCGGCAAAGTGCGCCTGTTCGATGTGACCACTCGCACGATCCTACGATACTTCGAGGGTCACAAGGCTCCGGTGCATCGCACGTTCTTTACCGCGGACGGGCACCATGTAGCGAGCTTCTCGGACGATCGTACCGTCGGGTACTGGGATATTGCGACGGAAAACCATCTGGACACGTTCACCGGCACGAGGACTACATTCGGGCCGGTTGGACCAGCCGGGTCAGCCGAACATA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9375#2 ------------------------------------------------------------
consensus_9375#3 ------------------------------------------------------------
consensus_9375#0 GCGTAGTGCCGATACAGTGAAAAAAGTTTATTTCATGTGCAGTTAAAATGTCTCAATTCA 60
consensus_9375#1 ------------------------------------------------------------
consensus_9375#4 ------------------------------------------------------------
consensus_9375#2 ------------------------------------------------------------
consensus_9375#3 ------------------------------------------------------------
consensus_9375#0 AGAAAACCGATAGTAAAATCTACGCAAAAACCGCGACGGTACTGTCGCCGGACACAATAT 120
consensus_9375#1 ------------------------------------------------------------
consensus_9375#4 ------------------------------------------------------------
consensus_9375#2 ------------------------------------------------------------
consensus_9375#3 ------------------------------------------------------------
consensus_9375#0 ATTGGAAAAAGCTAGGGGTGCCCACGCTAGTAAAAGAGTTCGGTGCCATCGACTACATCG 180
consensus_9375#1 ------------------------------------------------------------
consensus_9375#4 ------------------------------------------------------------
consensus_9375#2 ------------------------------------------------------------
consensus_9375#3 ------------------------------------------------------------
consensus_9375#0 ACTTTTGTCCGGTAGAACCGTACCTGTTCGCGGTGACTGCCTCGGTCCGCGTGCAGATCT 240
consensus_9375#1 ------------------------------------------------------------
consensus_9375#4 ------------------------------------------------------------
consensus_9375#2 ------------------------------------------------------------
consensus_9375#3 ------------------------------------------------------------
consensus_9375#0 ACAACCCCATTACAAAGCTCGTGGTGAAAAACATAACAAAGTTCCAAGAGGCAGCCCACG 300
consensus_9375#1 ------------------------------------------------------------
consensus_9375#4 ------------------------------------------------------------
consensus_9375#2 ------------------------------------------------------------
consensus_9375#3 ------------------------------------------------------------
consensus_9375#0 GCGGATCGTTTCGCAAGGATGGCAATCTGCTGGTGGCGGGCGACGAACTCGGCAAAGTGC 360
consensus_9375#1 ------------------------------------------------------------
consensus_9375#4 ------------------------------------------------------------
consensus_9375#2 ------------------------------------------------------------
consensus_9375#3 ------------------------------------------------------------
consensus_9375#0 GCCTGTTCGATGTGACCACGCGCACGATCCTACGATACTTCGAGGGTCGGGTACTGGGAT 420
consensus_9375#1 ------------------------------------------------------------
consensus_9375#4 ------------------------------------------------------------
consensus_9375#2 ------------------------------------------------------------
consensus_9375#3 ------------------------------------------------------------
consensus_9375#0 ATTGCGACGGAAAACCATCTGCACACGTTCACCGGCCACGAGGACTACATTCGGGCCGGT 480
consensus_9375#1 ----------------------------CCGAAACGAACGCACGTGCTGGCGTAGGTGCC 32
consensus_9375#4 ------------------------------------------------------------
consensus_9375#2 ------------AAAGTTTATTTCATGTGCAGTTAAAATGTCTCAATTCAAGAAAACCGA 48
consensus_9375#3 ------------------------------------------------------------
consensus_9375#0 TGCACCAGCCCGGTCAGCCCGAACATAATCCTGTCCGGTGGGTATGACCGTAAAATCCGC 540
consensus_9375#1 GATACAGTGAAAAAAGTTTATTTCATGTGCAGTTAAAATGTCTCAATTCAAGAAAACCGA 92
consensus_9375#4 ------------------------------------------------------------
consensus_9375#2 TAGTAAAATCTACGCAAAAACCGCGACGGTACTGTCGCCGGACACAATATATTGGAAAAA 108
consensus_9375#3 ------------------------------------------------------------
consensus_9375#0 ATGTACGATACGCGTGTGAAAGAGTGCGTCATGACCGTGGACCACGGGCAGCCGGTAGAA 600
consensus_9375#1 TAGTAAAATCTACGCAAAAACCGCGACGGTACTGTCGCCGGACACAATCTATTGGAAAAA 152
consensus_9375#4 ------------------------------------------------------------
consensus_9375#2 GCTAGGGGTGCCCACGCTAGTAAAAGAGT-----TCGGTGCCATCGACTACATCGACTTT 163
consensus_9375#3 ------------------------------------------------------------
consensus_9375#0 TCGTTGGTGTTTCTGCCGAGCGGTGGCATCTTCATCAGTGCCGGCGG-TACCTCGGTGAA 659
consensus_9375#1 GCTAGGGGTGCCCACGCTAGTAAAAGAGT-----TCGGTGCCATCGATTACATCGACTTC 207
consensus_9375#4 ------------------------------------------------------------
consensus_9375#2 TGTCCGGTAGAACCGTACCTGTTCGCGGTGACTGCCTCGGTCCGCGTGCAGATCTACAAC 223
consensus_9375#3 -----------ATCGC-CGAGTTACATGTAGCTGGCCCAGCTCTC---CCAGCACACAAA 45
consensus_9375#0 CGTGTACGATGCCCTGTCGGGCGGCCGGCAGCTGGCCCAGCTCTCC--CAGCACCACAAA 717
consensus_9375#1 TGTCCGGTAGAACCGTACCTGTTCGCGGTGACTGCTTCGGTCCGCGTGCAGATCTACAAC 267
consensus_9375#4 ------------------------------------------------------------
consensus_9375#2 CCCATTACAAAGCTCGTGGTGAAAAACATAACAAAGTTCCAAGCGTCTGTTTTCCGGCAG 283
consensus_9375#3 ACGGTCACCTGCCTGCAGCTGGCCAGCG-------ATGGCAAGCGTCTGTTTTCCGGCAG 98
consensus_9375#0 ACGGTCACCTGCCTGCAGCTGGCCAGCG-------ATGGCAAGCGTCTGTTTTCCGGCAG 770
consensus_9375#1 CCCATTACAAAGCTCGTGGTGAAAAACATAACAAAGTTCCAAGAGG-CAGCCCACGGC-- 324
consensus_9375#4 --------------------------------------CCAGG--T-TAAGCCACGGC-- 17
** * ****
consensus_9375#2 CTTGGACCGGCACGTGAAGGTGTACGACATAGCCACCTACCAGGTGGTGCACACGATCGA 343
consensus_9375#3 CTTGGACCGGCACGTGAAGGTGTACGACATAGCCACCTACCAGGTGGTGCACACGATCGA 158
consensus_9375#0 CTTGGACCGGCACGTGAAGGTGTACGACATAGCCACCTACCAGGTGGTGCACACGATCGA 830
consensus_9375#1 ---GGAACGTTTCGCAAGGATG------GCAATCTGCTGGTGGCGGGCG-ACGAACTCGG 374
consensus_9375#4 ---GGATCGTT-CGCAAG-ATG------GCA-TCTGCTGGTGGCGGGCG-ACGAACTCGG 64
*** ** ** * ** * * ** * ** * ** ***
consensus_9375#2 CAGCTCGAACGCGATTCTGAGCCTCGGCATCTCGAAGAACGACGACACGCTCGTGACGGG 403
consensus_9375#3 CAGCTCGAACGCGATTCTGAGCCTCGGCATCTCGAAGAACGACGACACGCTCGTGACGGG 218
consensus_9375#0 CAGCTCGAACGCGATTCTGAGCCTCGGCATCTCGAAGAACGACGACACGCTCGTGACGGG 890
consensus_9375#1 CAA----AGTGCGCCTGTTCGATGTGACCACGCGCACGATCCTACGATACTT-CGAGGGT 429
consensus_9375#4 CAA----AGTGCGCCTGTTCGATGTGACCACTCGCACGATCCTACGATACTT-CGAGGGT 119
** * *** * * * * * * ** * * * ** ** **
consensus_9375#2 CATGGTGGACGGTTTGATCGC-CATCTATCGGCGCGAGGGCGATCCGCGGGACGAGCAGC 462
consensus_9375#3 CATGGTGGACGGTTTGATCGC-CATCTATCGGCGCGAGGGCGATCCGCGGGACGAGCAGC 277
consensus_9375#0 CATGGTGGACGGTTTGATCGC-CATCTATCGGCGCGAGGGCGATCCGCGGGACGAGCAGC 949
consensus_9375#1 CACAAGGCTCCGGTGCATCGCACGTTCTTTACCGCGGACGGACACCATGTAGCGAGCTT- 488
consensus_9375#4 CACAAGGCTCCGGTGCATCGCACGTTCTTTACCGCGGACGGGCACCATGTAGCGAGCTT- 178
** * * * * ***** * * * **** * ** * *****
consensus_9375#2 CGACCCAGCGGGTGCGCAAGGGCCACCACCAGCACATCTTCG-AGCCGGCCGACCAGCAG 521
consensus_9375#3 CGACCCAGCGGGTGCGCAAGGGCCAC-ACCAGCACATCTTCGCAGCCGGCCGACCAGCAG 336
consensus_9375#0 CGACCCAGCGGGTGCGCAAGGGCCACCACCAGCACATCTTCG-AGCCGGCCGACCAGCAG 1008
consensus_9375#1 ---CTCGGACGAT-CGTACCGTCGGGTACTGGGATATTGCGA----CGGAAAACCATCTG 540
consensus_9375#4 ---CTCGGACGAT-CGTACCGTCGGGTACTGGGATATTGCGA----CGGAAAACCATCTG 230
* * * * * ** * * * ** * * ** *** **** * *
consensus_9375#2 GTGGAGGAGTTCAAGTTCGTGCGCTACGAAGGGCACGATCGGGC--ACTGCGTAA-GTAC 578
consensus_9375#3 GTGGAGGAGTTCAAGTTCGTGCGCTACGAGGGGCACGATCGGGC--ACTGCGTAATGTAC 394
consensus_9375#0 GTTGAGGAGTTCAAGTTCGTGCGCTACGAGGGGCACGATCGGGC--ACTGCGTAA-GTAC 1065
consensus_9375#1 CACACGTTCACCGGCCACGAGGACTACATACGGGCCGGTTGCACCAGCCCGGTCA-GCCC 599
consensus_9375#4 GACACGTTCACCGGC-ACGAGGACTACATTCGGGCCGGTTGGACCAGCCGGGTCA-GCC- 287
* * ** * **** ** ** * * * * ** * *
consensus_9375#2 GAGTACAAGAAGGCACTGGATGCGGTCATGGCGGCAAAGGTAAGGGGAA-TGTGGCCGGA 637
consensus_9375#3 GAGTACAAGAAGGCACTGGATGCGGTCATGGCGGCCAAGGTAAGGGGAACTGTGGCCGGA 454
consensus_9375#0 GAGTACAAGAAGGCACTGGATGCGGTCATGGCGGCAAAGGTAAGGGGAA-TGTGGCCGGA 1124
consensus_9375#1 GAACATAATCCTGTCCGGCGGGTATGACCGTAAAATCCGAATGTACGATACGCGTGTGAA 659
consensus_9375#4 GAACATA----------------------------------------------------- 294
** * *
consensus_9375#2 GAAAACCGTGGCCCTCATCAAGGAGCTAATCCGGCGGAAGGGTCTGCACCGGG-CGCTGG 696
consensus_9375#3 GAAAACCGTGGCCCTCATCAAGGAGCTAATCCGGCGGAAGGGTCTGCACCGGGACGCTGG 514
consensus_9375#0 GAAAACCGTGGCCCTCATTAAGGAGCTAATCCGGCGGAAGGGTCTGCACCGGG-CGCTGG 1183
consensus_9375#1 AGAGTGCGTCATGACCGTGGACCACGGGCAACCGGTAGAATCGTTGGTGTTTCTGCCGAG 719
consensus_9375#4 ------------------------------------------------------------
consensus_9375#2 ACGATCGTTCGCCCGAGTTGTTGGT-GCACTTCATCAACTTTCTCACGCGCCACATCGG- 754
consensus_9375#3 ACGATCGTACGCCCGAGTCGATGGTAGCACTTCATCAACTTTCTCACAGCGCACATCGGG 574
consensus_9375#0 ACGATCGTTCGCCCGAGTCGTTGGT-GCACTTCATCAACTTTCTCACGCGCCACATCGG- 1241
consensus_9375#1 CGGTGGCATCTTCATCAGTGCCGGCGGTACCTCGGTGAACGTGTACGATGCCCTGTCGGG 779
consensus_9375#4 ------------------------------------------------------------
consensus_9375#2 CGACTATCGGTT-CACGCCCGTACTGATCGACGCGGGCAA-------------------- 793
consensus_9375#3 CGACTATCGGTTACACGCCCGTGCTGATCGACGCGGGCAACAATNCCTGCTGGACGTGTA 634
consensus_9375#0 CGACTATCGGTT-CACGCCCGTGCTGATCGACGCGGGCAACA--TTCTGCTGGACGTGTA 1298
consensus_9375#1 CGGCCGGCAGCTGGCCCAGCTCTCCCAGCACCACAAAACGGTCACCTGCCTGCAGCTGGC 839
consensus_9375#4 ------------------------------------------------------------
consensus_9375#2 ------------------------------------------------------------
consensus_9375#3 CGAAAGATTCGCTCCGANAAAGTTNGCGGGCCNCNANCGTGGGCAAAGCGTACGNGACNC 694
consensus_9375#0 CGAA-GATTCGCTC--GAAAAGTTTGCCGGC-ACGATCGTGGGCAAAGCGTTCGTGACGC 1354
consensus_9375#1 CAGCGATGGCAAGCGTCTGTTTTCCGGCAGCTTGGACCGGCACGTGAAGGTGTACGACAT 899
consensus_9375#4 ------------------------------------------------------------
consensus_9375#2 ------------------------------------------------------------
consensus_9375#3 CTCGCAGAANA------------------------------------------------- 705
consensus_9375#0 TCGCGAACAAGCTGCAGACGGAGGAGCAGCTGGTGCAGGAGTTCCTGAACCTGCAGGGTA 1414
consensus_9375#1 AGCCACCTACCAGGTGGTGCACACGATCGACAGCTCGAACGCGATTCTGAGCCTCGGCAT 959
consensus_9375#4 ------------------------------------------------------------
consensus_9375#2 ------------------------------------------------------------
consensus_9375#3 ------------------------------------------------------------
consensus_9375#0 TGCTGGACATGATTTCGGTGGCGGCGGATACGGCGGAACCGGACACCGTGGACGATGCGA 1474
consensus_9375#1 CTCGAA------------------------------------------------------ 965
consensus_9375#4 ------------------------------------------------------------
consensus_9375#2 ------------------------------------------------------------
consensus_9375#3 ------------------------------------------------------------
consensus_9375#0 TCGCACCGTACGACGCCTCGAACAAGGCGAAGAATCAAACGGTCATATCGGTCGACTGAC 1534
consensus_9375#1 ------------------------------------------------------------
consensus_9375#4 ------------------------------------------------------------
consensus_9375#2 ------------------------------------------------------------
consensus_9375#3 ------------------------------------------------------------
consensus_9375#0 CGGAGCGTGTTTGCACGGGTAGGGATAAACAACGCAAGACAAAATAGAAACTATCAACCC 1594
consensus_9375#1 ------------------------------------------------------------
consensus_9375#4 ------------------------------------------------------------
consensus_9375#2 -----
consensus_9375#3 -----
consensus_9375#0 ATACA 1599
consensus_9375#1 -----
consensus_9375#4 -----
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||