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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9376#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1445 fasta sequence
[CGTCCGCACACAACCGGGCGACGTTCGTCGTGCATTTTCTGCTCAATGTTTTCGTACTTCAGGCGTGCTTTAGCAATTTCCATAGATTTTCACCGTGCCACAGCACAGCTCACGCAACAGTGCGCACGGAAGCTGTGCACAGCGCCCGCAATAGACGACGGTGTGAGGCAACGTTTTGCGGCCGAACTTGCGGCCGCGGTGGAAGTGAAACTAGCGGCCAAAAAGCAAGAGGCACAGAAGCGAATGGAATCGCGCAAAACCAAACAGGAGGTGCAGCAGCGGTACAATGGTGCGGTCAAGCGGCGCAAGTGGGAAGATCCGCCCGAGGATCCGGAGGCGGTGAAAAACTTCGATCCCGCGTCGCGGTCAAGCGGCGCAAGAGCATCATCCTGCTCGGGTACTCGGGCGTGAACTACTTCGGCATGCAGCGCAATCCGGGTACGAAAACGATCGAGGAGGATCTGCTGCGGGCGATGCAGAAGCGGGAGTGGATCAATGACGAAGGGTTCCGGCAGCCGCAGCAGATCCAGTTCCAGCGAGCGGCCCGCACCGATAAAGGCGTGTCGGCGGCCATGCAGGTCGTGTCGATCAAGCTGCCTGACAATCTGGACATTGAGGCACTTAACTCCGAGCTGCCCGAGGACATCCGGGTGTATGCGGTGAAGCGCGTGACGAAAGGATTCAATTCCAAGACGAACTGCGATGCCCGTACCTACACGTACACGCTGCCGACGATAGCGTTCGCACCGAACGAGGAAAAGGTCGACATTCAAACGTACCGTCTGCCCGCGGAACGGCTGGCTCGGGTCAACGAA-TGCTTTGCCCTGTACGTGGGTACGAAGAACTTTCACAACTTTACCAGCCGCAAGGAGTTTCTCGATCCATCCGTGAAGCGGTTCATCATGTCGTTCGAGTGTGATCCACCCTTCCTGCCGGA-AGGATCAAC-GGCAGAGTTTGCTACGATTAAAATCAAAGGGCAAAGCTTCATGCTGCATCAGATACGGAAGATGGTGGGCCTCACCATAGCGGTCGTGCGCGGCCTCGCGGAAAGCGACATTATCGAGAAAGCGTTCGGCCAGGAGCGGTACGGCATCCCGACGGCACCCGGGTTGGGGCTAGTGCTGAGCAGAATTCACTACGACAAGTACAACAAGCGGTACGGCGAGGACGGTTGCCACGAGACGCTCGAGTTTGAGAAGGAGGAGCCATTGATACAGGAGTTTTTCAAGCGCCACATCGCATCGACCATCGTCGAGACGGAGCTGAAGACGAACTCGATGGTCGAGTGGCTGGAGAAGCTGCCGCTGCACAGCTACGAACCGAGGGACGAGAGTGAACCGAGCGAGTGGAAACCACGGAATAGGAAAGCTTCCGACGATCAGGATGACGATGACGAAT--AAACCACTGGCCTTGTTATATTGCATTAGGCAAACGCTAAAAAAAAA]
[+] EMBL CNS08ZYE [CGTCCGCACACAACCGGGCGACGTTCGTCGTGCATTTTCTGCTCAATGTTTTCGTACTTCAGGCGTGCTTTAGCAATTTCCATAGATTTTCACCGTGCCACAGCACAGCTCACGCAACAGTGCGCACGGAAGCTGTGCACAGCGCCCGCAATAGACGACGGTGTGAGGCAACGTTTTGCGGCCGAACTTGCGGCCGCGGTGGAAGTGAAACTAGCGGCCAAAAAGCAAGAGGCACAGAAGCGAATGGAATCGCGCAAAACCAAACAGGAGGTGCAGCAGCGGTACAATGGTGCGGTCAAGCGGCGCAAGTGGGAAGATCCGCCCGAGGATCCGGAGGCGGTGAAAAACTTCGATCCCGCGTCGCGGTCAAGCGGCGCAAGAGCATCATCCTGCTCGGGTACTCGGGCGTGAACTACTTCGGCATGCAGCGCAATCCGGGTACGAAAACGATCGAGGAGGATCTGCTGCGGGCGATGCAGAAGCGGGAGTGGATCAATGACGAAGGGTTCCGGCAGCCGCAGCAGATCCAGTTCCAGCGAGCGGCCCGCACCGATAAAGGCGTGTCGGCGGCCATGCAGGTCGTGTCGATCAAGCTGCCTGACAATCTGGACATTGAGGCACTTAACTCCGAGCTGCCCGAGGACATCCGGGTGTATGCGGTGAAGCGCGTGACGAAAGGATTCAATTCCAAGACGAACTGCGATGCCCGTACCTACACGTACACGCTGCCGACGATAGCGTTCGCACCGAACGAGGAAAAGGTCGACATTCAAACGTACCGTCTGCCCGCGGAACGGCTGGCTCGGGTCAACGAA TGCTTTGCCCTGTACGTGGGTACGAAGAACTTTCACAACTTTACCAGCCGCAAGGAGTTTCTCGATCCATCCGTGAAGCGGTTCATCATGTCGTTCGAGTGTGATCCACCCTTCCTGCCGGA AGGATCAAC GGCAGAGTTTGCTACGATCAAAATCAAAGGACAAAGCTTCATGCTGCATCAGATACGGAAGATGGTGGGCCT ]
[-] EMBL CNS08N37 [ AGGTCGTGTCGATCAAGTTTTTTGACAATCTGGACATCGAGGCACTTAACTCCGAGCTGCCCGAGGACATCCGGGTGTATGCGGTGAAGCGCGTGACGAAAGGATTCAATTCCAAGACGAACTGCGACGCCCGTACCTACACGTACACGCTGCCGACGATAGCGTTCGCACCGAACGAGGAAAAGGTTGACATTCAAACGTACCGTCTGCCCGCGGAACGGCTGGCTCGGGTCAACGAAGTGC TTGCCCTGTACGTGGGCACGAAGAACTTTCACAACTTTACCAGCCGCAAGGAGTTTCTCGATCCATCCGTGAAGCGGTTCATCATGTCGTTCGAGTGTGATCCACCCTTCCTCCCGGACGGGGTCAACGGGCAGAGTTTGCTACGATTAAAATCAAAGGGCAAAGCTTCATGCTGCATCAGATACGGAAGATGGTGGGCCTCACCATAGCGGTCGTGCGCGGCCTCGCGGAAAGCGACATTATCGAGAAAGCGTTCGGCCAGGAGCGGTACGGCATCCCGACGGCACCCGGGTTGGGGCTAGTGCTGAGCAGAATTCACTACGACAAGTACAACAAGCGGTACGGCGAGGACGGTTGCCACGAGACGCTCGAGTTTGAGAAGGAGGAGCCATTGATACAGGAGTTTTTCAAGCGCCACATTGCATCGACCATCGTCGAGACGGAGCTGAAGACGAACTCGATGGTCGAGTGGCTGGAGAAG TGCCGCTGAACAGCTACGAACCGAGGGAC ]
[-] EMBL CNS08F9G [ TGCTACGATTAAAATCAAAGGGCAAAGCTTCATGCTGCATAAGATACGGAAGATGGTGGGCCTCACCATAGCGGTCGTGCGCGGCCTCGCGGAAAGCGACATTATCGAGAAAGCGTTCGGCCAGGAGCGGTACGGCATCCCGACGGCACCCGGGTTGGGGCTTGTGCTGAGCAGAATTCACTACGACAAGTACAACAAGCGGTACGGCGAGGACGGTTGCCACGAAACGCTCGAGTTTGAGAAGGAGGAGCCAATGATACAGGAGTTTTTCAAGCGCCACATCGCATCGACCATCGTTGAGACGGAGCTGAAGACAAACTCGATGGTTGAGTGGCTGGAGAAGCTGCCGCTGAACAGCTACGAACCGAGGGACGAGAGTGAACCGAGCGAGTGGAAACCACGGAATAGGAAAGCTTCCGACGATCAGGATGACGATGACGAATAAAAACCACTGGCCTTGTTATATTGCATTAGGCAAACG ]
[-] EMBL AGA285019 [ GCATCAGATACGGAAGATGGTGGGCCTAACCATAGCGGTCGTTCGCGACCTCGCGGAAAGCGACATTATCGAGAAAGCGTTCGGCCAGGAGCGGTACGGCATCCCGACGGCACCCGGGTTGGGGCTAGTGCTGAGCAGAATTCACTACGACAAGTACAACAAGCGGTACGGCGAGGACGGTTGCCACGAGACGCTCGAGTTTGAGAAGGAGGAACCAATGATACAGGAGTTTTTCAAGCGCCACATCGCATCGACCATCGTCGAGACGGAGCTGAAGACGAACTCGATGGTCGAGTGGCTGGAGAAGCTGCCGCTGCACAGCTACGAACCGAGGGACGAGAATGAACCGAGCGAGTGGAAACCACGGAATAGGAAAGCTTCCGACGAT ]
[-] EMBL CNS09EN4 [ AAAGCGTTCGGCCAGGAGCGGTACGGCATCCCGACGGCACCCGGGTTGGGGCTAGTGCTGAGCAGAATTCACTACGACAAGTACAACAAGCGGTACGGCGAGGACGGTTGCCACGAGACGCTCGAGTTTGAGAAGGAGGAGCCATTGAAAAAGGAGTTTTTCAAGCGCCACATCGCATCGACCATCGTCGAGACGGAGCT ]
[-] EMBL CNS099FB [ GAATTCACTACGACAAG ACAACAAGCGGTACGGCGAGGACGGTTGCCACGAGACGCTCGAGTTTGAGAAGGAGGAGCCATTGATACAGGAGTTTTTCAAGCGCCACATCGCATCGACCATCGTCGAGACGGAGCTGAAGACGAACTCGATGGTCGAGTGGCTGGAGAAGCTGCCGCTGCACAGCTACGAACCGAGGGACGAGAGTGAACCGAGCGAGTGGAAACCACGGAATAGGAAAGCTTCCGACGATCAGGATGACGATGACGAAT AAACAACTGGCCTTGTTATAATGC ]
[-] EMBL CNS08NM9 [ GGAAGGTTGCCAAAAAAAGCTCGAGTTTGAGAAGGAGGAGCCAATGATACAGGAGTTTTTCAAGCGCCACATCGCATCGACCATCGTTGAGACGGAGCTGAAGACAAACTCGATGGTTGAGTGGCTGGAGAAGCTGCCGCTGCACAGCTACGAACCGAGGGACGAGAGTGAACCGAGCGAGTGGAAACCACGGAATAGGAAAGCTTCCGACGATCAGGATGACGATGACGAATAAAAACCACTGGCCTTGTTTTATTGCATTAGGCAAACGCTAAAAAAAAA]
consensusID : consensus_9376#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1020 fasta sequence
[AAAAAACATCCGTCTCCCCCACGCACCGGCACACGACTGGGCGATCGTTCACCGTGCATTTTCCGCTCAATGTTTTCGTGCTTCAGGCGTGCCGTTGCAGTAGCAGTAGATTTTCACTGTGCCACA-GCACAGCTCACGGAACAGTGCGCACGGAAGCTGTGCACACTGCCAACCGCGGCTCGCAGCCCAGCGCCCGCAATAGACGACGGTGTGAGGCA--ACGTTTTGCGGCCGAACTTGCGGCCGCGGTGGAAGTGAAACTAGCGGCCAAAAAGCAAGAGGCACAGAAGCGAATGGAATCGCGCAAAACC-AAACAGGAGGTGCAGCAGCGGTACAATGGTGCGGTCAAGCGGCGCAAGT-GGGA-AGATCCGCCCGAGGATCCGGAGGCGGTGAAAAACTTCGATCCCGCGTCGCGGGTCAAGCGGCGCAAGAGCATCATCCTGCTCGGGTACTCGGGCGTGAACTACTTCGGCATGCAGCGCAATCCGGGTACGAAAACGATCGAGGAGGATCTGCTGCGGGCGATGCAGAAGCGGGAGTGGATCAATGACGAAGGGTTCCGGCAGCCGCAGCAGATACA-GTTCCAGCGAGCGGCCCGCACCGATAAAGGCGTGTCCGCGGCCATGCAGGTCGTGTCTATCAAGCTGCCTGACAATCTGGACATCGAGGCACTTAACTCCGAGCTGCCCGAGGACATCCGGGTGTATGCGGTGAAGCGCGTGACGAAAGGATTCAATTCCAAGACGAACTGCGACGCCCGTACCTACACGTACACGCTGCCGACGATAGCGTTCGCACCGAACGAGGAAAAGGTTGACATTCAAACGTACCGTCTGCCCGCGGAACGGCTGGCTCGGGTCAACGAATCCTTGCCCTGTACGTGGGCACGAAGAACTTTCACAACTTTACCAGCCGCAAGGAGTTTCTCGATCCATCTGTGAAGCGGTTCATCATGTCGTTCGAGTGTCATCCACCCTTCCTGCCGGACGGGTCAACGGCAGAATTTGCTACGATTAAAATCA]
[+] EMBL CNS08NM8 [AAAAAACATCCGTCTCCCCCACGCACCGGCACACGACTGGGCGATCGTTCACCGTGCATTTTCCGCTCAATGTTTTCGTGCTTCAGGCGTGCCGTTGCAGTAGCAGTAGATTTTCACTGTGCCACA GCACAGCTCACGGAACAGTGCGCACGGAAGCTGTGCACACTGCCAACCGCGGCTCGCAGCCCAGCGCCCGCAATAGACGACGGTGTGAGGCA ACGTTTTGCGGCCGAACTTGCGGCCGCGGTGGAAGTGAAACTAGCGGCCAAAAAGCAAGAGGCACAGAAGCGAATGGAATCGCGCAAAACC AAACAGGAGGTGCAGCAGCGGTACAATGGTGCGGTCAAGCGGCGCAAGT GGGA AGATCCGCCCGAGGATCCGGAGGCGGTGAAAAACTTCGATCCCGCGTCGCGGTTCAAGCGGCGCAAGAGCATCATCCTGCTCGGGTACTCGGGCGTGAACTACTTCGGCATGCAGCGCAATCCGGGTACGAAAACGATCGAGGAGGATCTGCTGCGGGCGATGCAGAAGCGGGAGTGGATCAATGACGAAGGGTTCCGGCAGCCGCAGCAGATACA GTTCCAGCGAGCGGCCCGCACCGATAAAGGCGTGTCCGCGGCCATGCAGGTCGTGTCTATCAAGCTGCCTGACAATCTGGACATCGAGGCACTTAACTCCGAGCTGCCCGAGGACATCCGGGTGTATGCGGTGAAGCGCGTGACGAAAGGATTCAATTCCAAGACGAACTGCGACGCCCGTACCTACACGTACACGCTGCCGACGATAGCGTTCGCACCGAACGAGGAAAAGGTTGACATTCAA ]
[+] EMBL CNS08F9F [ CGTCT CCCCACGCACCGGCACACGACTGGGCGATCGTTCACCGTGCATTTTCCGCTCAATGTTTTCGTGCTTCAGGCGTGCCGTTGCAGTAGCAGTAGATTTTCACTGTGCCACA GCACAGCTCACGGAACAGTGCACACGGAAGCTGTGCACACTGCCAACCGCGGCTCGCAGCCCAGCGCCCGCAATAGACGACGGTGTGAGGCA ACGTTTTGCGGCCGAACTTGCGGCCGCGGTGGAAGTGAAACTAGCGGCCAAAAAGCAAGAGGCACAGAAGCGAATGGAATCGCGCAAAACC AAACAGGAGGTGCAGCAGCGGTACAATGGTGCGGTCAAGCGGCGCAAGT GGGA AGATCCGCCCGAGGATCCGGAGGCGGTGAAAAACTTCGATCCCGCGTCGC GGTCAAGCGGCGCAAGAGCATCATCCTGCTCGGGTACTCGGGCGTGAACTACTTCGGCATGCAGCGCAATCCGGGTACGAAAACGATCGAGGAGGATCTGCTGCGGGCGATGCAGAAGCGGGAGTGGATCAATGACGAAGGGTTCCGGCAGCCGCAGCAGATACA GTTCCAGCGAGCGGCCCGCACCGATAAAGGCGTGTTCGCGGCCATGCAGGTCGTGTCTATCAAGCTGCCTGACAATCTGGACATCGAGGCACTTAACTCCGAGCTGCCCGAGGACATCCGGGTGTATGCGGTGAAGCGCGTCACGAAAGGATTCAATTCCAAGACGAACTGCGACGCCCGTACCTACACGTACACGCTGCCGACGATAGCGTTCGCACCGAACGAGGAAAAGGTTGACATTCAAACGTACCGTCTGCCCGCGGAACGGCTGGCTCGGGTCAACGAATCCTTGCCCTGTACGTGGGCACGAAGAACTTTCACAACTTTACCAGCCGCAAGGAGTTTCTCGATCCATCTGTGAAGCGGTTCATCATGTCGTTCGAGTGTCATCCACCCTTCCTGCCGGACGGGTCAACGGCAGAATTTGCTACGATTAAAATCA]
[+] EMBL CNS08N36 [ TCACCGTGCCACATGCACAGCTCACGGAACAGTGCGCACGGAAGCTGTGCACACTGCCAACCGCGGCTCGCAGCCCAGCGCCCGCAATAGACGACGGTGTGAGGCA ACGTTTTGCGGCCGAACTTGCGGCCGCGGTGGAAGTGAAACTAGCGGCCAAAAAGCAAGAGGCACAGAAGCGAATGGAATCGCGCAAAACCAAAACAGGAGGTGCAGCAGCGGTACAATGGTGCGGTCAAGCGGCGCAAGTGGGGATAGATCCGCCCGAGGATCCGGAGGCGGTGAAAAACTTCGATCCCGCGTCGCGGTTCAAGCGGCGCAAGAGCATCATCCTGCTCGGGTACTCGGGCGTGAACTACTTCGGCATGCAGCGCAATCCGGGTACGAAAACGATCGAGGAGGATCTGCTGCGGGCGATGCTGAAGCGGGAGTGGATCAATGACGAAGGGTTCCGGCAGCCGCAGCAGATACATGTTCCAGCGAGCGGCCCGCACCGATAAAGGCGTGTCCGCGGCCATGCAGGTCGTGTCGATCAAGCTGCCTGACAATCTGGACATCGAGGCACTTAACTCCGAGCTGCCCGAGGACATCCGGGTGTATGCGGTGAAGCGCGTGACGAAAGGATTCAATTCCAAGACGAACTGCGACGCCCGTACCTACACGTACACGCTGCCGACGATAGCGTTCGCACCGAACGAGGAAAAGGTTGACATTCAAACGTACCGTCTGCCCGCGGAACGGCTGGCTCGGGTCAACGAATGCTTGCCCTGTACGTGG ]
[+] EMBL CNS099FA [ CACA GCACAGCTCACGGAACAGTG GCACGGAAGCTGTGCACACTGCCAACCGCGGCTCGCAGCCCAGCGCCCGCAATAGACGACGGTGTGAGGCA ACGTTTTGCGGCCGAACTTGCGGCCGCGGTGGAAGTG AACTAGCGGCCAAAAAGCAAGAGGCACAGAA ]
[+] EMBL BX601850 [ CAGCCCAGCGCCCGCAATAGACGACGGTGTGAGGCA ACGTTTTGCGGCCGAACTTGCGGCCGCGGTGGAAGTGAAACTAGCGGCCAAAAAGCAAGAGGCACAGAAGCGAATGGAATCGCGCAAAACC AAACAGGAGGTGCAGCAGCGGTACAATGGTGCGGTCAAGCGGCGCAAGT GGGA AGATCCGCCCGAGGATCCGGAGGCGGTGAAAAACTTCGATCCCGCGTCGCGGGTCAAGCGGCGCAAGAGCATCATCCTGCTCGGGTACTCGGGCGTGAACTACTTCGGCATGCAGCGCAATCCGGGTACGAAAACGATCGAGGAGGATCTGCTGCGGGCGATGCTGAAGCGGGAGTGGATCAATGACGAAGGGTTCCGGCAGCC GCAGATACA GTTCCAGCGAGCGGCCCGCACCGATAAAGGCGTGTCCGCGGCCA ]
[+] EMBL BX467813 [ ccagaattcGGCACGATGGTTTGCGGCCGAACTTGCGGCCGCGGTGGAAGTGAAACTAGCGGCCAAAAAGCAAGAGGCACAGAAGCGAATGGAATCGCGCAAAACC AAACAGGAGGTGCAGCAGCGGTACAATGGTGCGGTCAAGCGGCGCAAGT GGGA AGATCCGCCCGAGGATCCGGAGGCGGTGAAAAACTTCGATCCCGCGTCGCGGGTCAAGCGGCGCAAGAGCATCATCCTGCTCGGGTACTCGGGCGTGAACTACTTCGGCATGCAGCGCAATCCGGGTACGAAAACGATCGAGGAGGATCTGCTGCGGGCGATGCAGAAGCGGGAGTGGATCAATGACGAAGGGTTCCGGCAGCCGCAG ]
[+] EMBL CNS09EN3 [ AAGCAAGAGGCACAGAAGCGAATGGAATCGCGCAAAACC AAACAGGAGGTGCAGCAGCGGTACAATGGTGCGGTCAAGCGGCGCAAGT GGGA AGATCCGCCCGAGGATCCGGAGGCGGTGAAAAACTTCGATCCCGCGTCGC GGTCAAGCGGCGCAAGAGCATCATCCTGCTCGGGTACTCGGGCGTGAACTACTTCGGCATGCAGCGCAATCCGGGTACGAAAACGATCGAGGAGGATCTGCTGCGGGCGATGCTGAAGCGGGAGTGGATCAATGACGAAGGGTTCCGGCAGCCGCAGCAGATACA GTTCCAGCGAGCGGCCCGCACCGATAAAGGCGTGTCCGCGGCCATGCAGGTCGTGTCGATCAAGCTGCCTGACAATCTGGACATCGAGGCACTTAACTCCGAGCTGCCCGAGGACATCCGGGTGTATGCGGTGAAGCGCGTGACGAAAGGATTCAATTCCAAGACGAACTGCGACGCCCGTACCTACACGTACACGCTGCCGACGATAGCGTTCGCACCGAACGAGGAAAAGGTTGACATTCAAACGTACCGTCTGCCCGCGGAACGGCTGGCTCGGGTCAACGAAT ]
consensusID : consensus_9376#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 593 fasta sequence
[GAATTGCCCGAGGTTGTGGCATGCAGGTCGTGTCGATCAAGCTGCCTGACAATCTGGACATTGAGGCACTTAACTCCGAGCTGCCCGAGGACATCCTGGGTGTATGCGGTGAAGCGCGTGACGAAAGGATTCAATTCCAAGACGAACTGCTGATGCCCTGTACCTACACTGTACACTGCTGCCTGACTGATATGCTGTTCNGCACCTGAACTGATGGAAAATGTGTCTGACATTCAAACTGTACCTGTCTGCCCTGCTGTGAACTGGCTGGCTCTGTGGTCAACGAAGTGCTTGCCCTGTACGTGGGTACGAATGAACTTTCACAACTTTACCAGCCTGCAATGGAGTTTCTCGATCCATCCTGTGAAGCTGGTTCATCATGTCGTATCCGAGTGTGATCCACCCTTCCTGCCTGGAAGGATCAACGGCAGAGTTTGCTACGATCAAAATCAAAGGACAAAGCTTCATGCTGCATCAGATACGGAAGATGGTGGGCCTCACCATAGCGGTCGTGCGCGGCCTCGCGGCAAAGCGACCATCTACTCGAGCAAAGCGTTCGGCAGGATCGGTACGCGCATCCCGCACGGCACCCG]
[+] EMBL AL931047 [GAATTGCCCGAGGTTGTGGCATGCAGGTCGTGTCGATCAAGCTGCCTGACAATCTGGACATTGAGGCACTTAACTCCGAGCTGCCCGAGGACATCCTGGGTGTATGCGGTGAAGCGCGTGACGAAAGGATTCAATTCCAAGACGAACTGCTGATGCCCTGTACCTACACTGTACACTGCTGCCTGACTGATATGCTGTTCNGCACCTGAACTGATGGAAAATGTGTCTGACATTCAAACTGTACCTGTCTGCCCTGCTGTGAACTGGCTGGCTCTGTGGTCAACGAAGTGCTTGCCCTGTACGTGGGTACGAATGAACTTTCACAACTTTACCAGCCTGCAATGGAGTTTCTCGATCCATCCTGTGAAGCTGGTTCATCATGTCGTATCCGAGTGTGATCCACCCTTCCTGCCTGGAAGGATCAACGGCAGAGTTTGCTACGATCAAAATCAAAGGACAAAGCTTCATGCTGCATCAGATACGGAAGATGGTGGGCCTCACCATAGCGGTCGTGCGCGGCCTCGCGGCAAAGCGACCATCTACTCGAGCAAAGCGTTCGGCAGGATCGGTACGCGCATCCCGCACGGCACCCG]
consensusID : consensus_9376#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 426 fasta sequence
[GAAACTATCGGCCAGAAAGCACAGAAGCGAATGGAATCGCGCAAAACCAAACAGGAGGTGCAGCAGCGGTACAATGGTGCGGTCAAGCGCGTGACGAAAGGATTCAATTCCAAGACGAACTGCGACGCCCGTACCTACACGTACACGCTGCCGACGATAGCGTTCGCACCGAACGAGGAAAAGGTTGACATTCAAACGTACCGTCTGCCCGCGGAACGGCTGGCTCGGGTCAACGAAGTGCTTGCCCTGTACGTGGGCACGAAGAACTTTCACAACTTTACCAGCCGCAAGGAGTTTCTCGATCCATCCGTGAAGCGGTTCATCATGTCGTTCGAGTGTGATCCACCCTTCCTGCCGGACGGGTCAACGGCAGAGTTTGCTACGATTAAAATCAAAGGGCAAAGCTTCATGCTGCATCAGATACGG]
[+] EMBL AGA283730 [GAAACTATCGGCCAGAAAGCACAGAAGCGAATGGAATCGCGCAAAACCAAACAGGAGGTGCAGCAGCGGTACAATGGTGCGGTCAAGCGCGTGACGAAAGGATTCAATTCCAAGACGAACTGCGACGCCCGTACCTACACGTACACGCTGCCGACGATAGCGTTCGCACCGAACGAGGAAAAGGTTGACATTCAAACGTACCGTCTGCCCGCGGAACGGCTGGCTCGGGTCAACGAAGTGCTTGCCCTGTACGTGGGCACGAAGAACTTTCACAACTTTACCAGCCGCAAGGAGTTTCTCGATCCATCCGTGAAGCGGTTCATCATGTCGTTCGAGTGTGATCCACCCTTCCTGCCGGACGGGTCAACGGCAGAGTTTGCTACGATTAAAATCAAAGGGCAAAGCTTCATGCTGCATCAGATACGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9376#2 ------------------------------------------------------------
consensus_9376#3 ------------------------------------------------------------
consensus_9376#0 -----------------------CGTCCGCACACAACCGGGCGA-CGTTCGTCGTGCATT 36
consensus_9376#1 AAAAAACATCCGTCTCCCCCACGCACCGGCACACGACTGGGCGATCGTTCACCGTGCATT 60
consensus_9376#2 ------------------------------------------------------------
consensus_9376#3 ------------------------------------------------------------
consensus_9376#0 TTCTGCTCAATGTTTTCGTACTTCAGGCGTGCTTTAGCAATTTCCATAGATTTTCACCGT 96
consensus_9376#1 TTCCGCTCAATGTTTTCGTGCTTCAGGCGTGCCGTTGCAGTAGCAGTAGATTTTCACTGT 120
consensus_9376#2 ------------------------------------------------------------
consensus_9376#3 ------------------------------------------------------------
consensus_9376#0 GCCACAGCACAGCTCACGCAACAGTGCGCACGGAAGCTGTGCACA--------------- 141
consensus_9376#1 GCCACAGCACAGCTCACGGAACAGTGCGCACGGAAGCTGTGCACACTGCCAACCGCGGCT 180
consensus_9376#2 ------------------------------------------------------------
consensus_9376#3 ------------------------------------------------------------
consensus_9376#0 ---------GCGCCCGCAATAGACGACGGTGTGAGGCAACGTTTTGCGGCCGAACTTGCG 192
consensus_9376#1 CGCAGCCCAGCGCCCGCAATAGACGACGGTGTGAGGCAACGTTTTGCGGCCGAACTTGCG 240
consensus_9376#2 ------------------------------------------------------------
consensus_9376#3 ------------------------------------------------------------
consensus_9376#0 GCCGCGGTGGAAGTGAAACTAGCGGCCAAAAAGCAAGAGGCACAGAAGCGAATGGAATCG 252
consensus_9376#1 GCCGCGGTGGAAGTGAAACTAGCGGCCAAAAAGCAAGAGGCACAGAAGCGAATGGAATCG 300
consensus_9376#2 ------------------------------------------------------------
consensus_9376#3 ------------------------------------------------------------
consensus_9376#0 CGCAAAACCAAACAGGAGGTGCAGCAGCGGTACAATGGTGCGGTCAAGCGGCGCAAGTGG 312
consensus_9376#1 CGCAAAACCAAACAGGAGGTGCAGCAGCGGTACAATGGTGCGGTCAAGCGGCGCAAGTGG 360
consensus_9376#2 ------------------------------------------------------------
consensus_9376#3 ------------------------------------------------------------
consensus_9376#0 GAAGATCCGCCCGAGGATCCGGAGGCGGTGAAAAACTTCGATCCCGCGTCGCGG-TCAAG 371
consensus_9376#1 GAAGATCCGCCCGAGGATCCGGAGGCGGTGAAAAACTTCGATCCCGCGTCGCGGGTCAAG 420
consensus_9376#2 ------------------------------------------------------------
consensus_9376#3 ------------------------------------------------------------
consensus_9376#0 CGGCGCAAGAGCATCATCCTGCTCGGGTACTCGGGCGTGAACTACTTCGGCATGCAGCGC 431
consensus_9376#1 CGGCGCAAGAGCATCATCCTGCTCGGGTACTCGGGCGTGAACTACTTCGGCATGCAGCGC 480
consensus_9376#2 ------------------------------------------------------------
consensus_9376#3 ------------------------------------------------------------
consensus_9376#0 AATCCGGGTACGAAAACGATCGAGGAGGATCTGCTGCGGGCGATGCAGAAGCGGGAGTGG 491
consensus_9376#1 AATCCGGGTACGAAAACGATCGAGGAGGATCTGCTGCGGGCGATGCAGAAGCGGGAGTGG 540
consensus_9376#2 ------------------------------------------------------------
consensus_9376#3 ------------------------------------------------------------
consensus_9376#0 ATCAATGACGAAGGGTTCCGGCAGCCGCAGCAGATCCAGTTCCAGCGAGCGGCCCGCACC 551
consensus_9376#1 ATCAATGACGAAGGGTTCCGGCAGCCGCAGCAGATACAGTTCCAGCGAGCGGCCCGCACC 600
consensus_9376#2 GAATTGCCCGAGGTTGTGGC-ATGCAGGTCGTGTCGATCAAGCTGCCTGACAATCTGGAC 59
consensus_9376#3 --------------------------GAAACTATCGGCCAGAAAGCACAGAAGC----GA 30
consensus_9376#0 GATAAAGGCGTGTCGGCGGCCATGCAGGTCGTGTCGATCAAGCTGCCTGACAATCTGGAC 611
consensus_9376#1 GATAAAGGCGTGTCCGCGGCCATGCAGGTCGTGTCTATCAAGCTGCCTGACAATCTGGAC 660
* * ** ** ** *
consensus_9376#2 ATTGAGGCACTTAACTCCGAGCTGCCCGAGGACATCCTGGGTGTA----TGCGGTGAAGC 115
consensus_9376#3 ATGGAATCGCGCAAAACCAAACAGG--AGGTGCAGCAGCGGTACAATGGTGCGGTCAAGC 88
consensus_9376#0 ATTGAGGCACTTAACTCCGAGCTGCCCGAGGACATCCG-GGTGTA----TGCGGTGAAGC 666
consensus_9376#1 ATCGAGGCACTTAACTCCGAGCTGCCCGAGGACATCCG-GGTGTA----TGCGGTGAAGC 715
** ** * * ** ** * * * * ** * *** * ****** ****
consensus_9376#2 GCGTGACGAAAGGATTCAATTCCAAGACGAACTGCTGATGCCCTGTACCTACACTGTACA 175
consensus_9376#3 GCGTGACGAAAGGATTCAATTCCAAGACGAACTGC-GACGCCC-GTACCTACAC-GTACA 145
consensus_9376#0 GCGTGACGAAAGGATTCAATTCCAAGACGAACTGC-GATGCCC-GTACCTACAC-GTACA 723
consensus_9376#1 GCGTGACGAAAGGATTCAATTCCAAGACGAACTGC-GACGCCC-GTACCTACAC-GTACA 772
*********************************** ** **** ********** *****
consensus_9376#2 CTGCTGCCTGACTGATATGCTGTTCNGCACCTGAACTGATGGAAAATGTGTCTGACATTC 235
consensus_9376#3 C-GCTGCC-GACG---ATAGCGTTCG-CACC-GAACGA--GGAAAAGGT---TGACATTC 193
consensus_9376#0 C-GCTGCC-GACG---ATAGCGTTCG-CACC-GAACGA--GGAAAAGGT---CGACATTC 771
consensus_9376#1 C-GCTGCC-GACG---ATAGCGTTCG-CACC-GAACGA--GGAAAAGGT---TGACATTC 820
* ****** *** ** **** **** **** ****** ** *******
consensus_9376#2 AAACTGTACCTGTCTGCCCTGCTGTGAACTGGCTGGCTCTGTGGTCAACGAAGTGCTTGC 295
consensus_9376#3 AAAC-GTACC-GTCTGCCC----GCGGAACGGCTGGCTCGG--GTCAACGAAGTGCTTGC 245
consensus_9376#0 AAAC-GTACC-GTCTGCCC----GCGGAACGGCTGGCTCGG--GTCAACGAATGCTTTGC 823
consensus_9376#1 AAAC-GTACC-GTCTGCCC----GCGGAACGGCTGGCTCGG--GTCAACGAAT-CCTTGC 871
**** ***** ******** * * * ********* * ********* ****
consensus_9376#2 CCTGTACGTGGGTACGAATGAACTTTCACAACTTTACCAGCCTGCAATGGAGTTTCTCGA 355
consensus_9376#3 CCTGTACGTGGGCACGAA-GAACTTTCACAACTTTACCAGCC-GCAA-GGAGTTTCTCGA 302
consensus_9376#0 CCTGTACGTGGGTACGAA-GAACTTTCACAACTTTACCAGCC-GCAA-GGAGTTTCTCGA 880
consensus_9376#1 CCTGTACGTGGGCACGAA-GAACTTTCACAACTTTACCAGCC-GCAA-GGAGTTTCTCGA 928
************ ***** *********************** **** ************
consensus_9376#2 TCCATCCTGTGAAGCTGGTTCATCATGTCGTATCCGAGTGTGATCCACCCTTCCTGCCTG 415
consensus_9376#3 TCCATCC-GTGAAGC-GGTTCATCATGTCGT--TCGAGTGTGATCCACCCTTCCTGCC-G 357
consensus_9376#0 TCCATCC-GTGAAGC-GGTTCATCATGTCGT--TCGAGTGTGATCCACCCTTCCTGCC-G 935
consensus_9376#1 TCCATCT-GTGAAGC-GGTTCATCATGTCGT--TCGAGTGTCATCCACCCTTCCTGCC-G 983
****** ******* *************** ******* **************** *
consensus_9376#2 GAAGGATCAACGGCAGAGTTTGCTACGATCAAAATCAAAGGACAAAGCTTCATGCTGCAT 475
consensus_9376#3 GACGGGTCAACGGCAGAGTTTGCTACGATTAAAATCAAAGGGCAAAGCTTCATGCTGCAT 417
consensus_9376#0 GAAGGATCAACGGCAGAGTTTGCTACGATTAAAATCAAAGGGCAAAGCTTCATGCTGCAT 995
consensus_9376#1 GACGGGTCAACGGCAGAATTTGCTACGATTAAAATCA----------------------- 1020
** ** *********** *********** *******
consensus_9376#2 CAGATACGGAAGATGGTGGGCCTCACCATAGCGGTCGTGCGCGGCCTCGCGGCAAAGCGA 535
consensus_9376#3 CAGATACGG--------------------------------------------------- 426
consensus_9376#0 CAGATACGGAAGATGGTGGGCCTCACCATAGCGGTCGTGCGCGGCCTCGCGGAAAGCGAC 1055
consensus_9376#1 ------------------------------------------------------------
consensus_9376#2 CCATCTACTCGAGCAAAGCGTTCGGCAGGATCGGTACGCGCATCCCGCACGGCACCCG-- 593
consensus_9376#3 ------------------------------------------------------------
consensus_9376#0 ATTATCGAGAAAGCGTTCGGCCAGGAGCGGTACGGCATCCCGACGGCACCCGGGTTGGGG 1115
consensus_9376#1 ------------------------------------------------------------
consensus_9376#2 ------------------------------------------------------------
consensus_9376#3 ------------------------------------------------------------
consensus_9376#0 CTAGTGCTGAGCAGAATTCACTACGACAAGTACAACAAGCGGTACGGCGAGGACGGTTGC 1175
consensus_9376#1 ------------------------------------------------------------
consensus_9376#2 ------------------------------------------------------------
consensus_9376#3 ------------------------------------------------------------
consensus_9376#0 CACGAGACGCTCGAGTTTGAGAAGGAGGAGCCATTGATACAGGAGTTTTTCAAGCGCCAC 1235
consensus_9376#1 ------------------------------------------------------------
consensus_9376#2 ------------------------------------------------------------
consensus_9376#3 ------------------------------------------------------------
consensus_9376#0 ATCGCATCGACCATCGTCGAGACGGAGCTGAAGACGAACTCGATGGTCGAGTGGCTGGAG 1295
consensus_9376#1 ------------------------------------------------------------
consensus_9376#2 ------------------------------------------------------------
consensus_9376#3 ------------------------------------------------------------
consensus_9376#0 AAGCTGCCGCTGCACAGCTACGAACCGAGGGACGAGAGTGAACCGAGCGAGTGGAAACCA 1355
consensus_9376#1 ------------------------------------------------------------
consensus_9376#2 ------------------------------------------------------------
consensus_9376#3 ------------------------------------------------------------
consensus_9376#0 CGGAATAGGAAAGCTTCCGACGATCAGGATGACGATGACGAATAAACCACTGGCCTTGTT 1415
consensus_9376#1 ------------------------------------------------------------
consensus_9376#2 ------------------------------
consensus_9376#3 ------------------------------
consensus_9376#0 ATATTGCATTAGGCAAACGCTAAAAAAAAA 1445
consensus_9376#1 ------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||