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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9387#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1026 fasta sequence
[GGCAAAAAAACAAACACAAAACCATCTGTGGTGGTCGTTTTTTATTCGTGGCCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCA-ATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC--GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC-AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTGAGAAGACGATGTA-GGGGGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTAACTCAGTTGGATGAAGTTATGAGTCATGACCGATTAAATATCGATTCATGCCTAGCGGGCAGCACAGCAAAAACTGCCACTTTCCCGAACCGTGTGATAACCGATGGAGCCGTTGGTTACAGTTGCCATTAGCAAATAGCGGTGAATCAAGCTTTTGTTCAAGTTTCATTTCGATTAAAAGGAGCGTTTAAATTTTAAATACATTCGTACAGCCCCCGCAAACCAAAA]
[+] EMBL CNS094GT [GGCAAAAAAACAAACACAAAACCATCTGTGGTGGTCGTTTTTTATTCGTGGCCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACACAACCGGAAAGAGAGCAACGACCGCCGCGC GTGAAGGAAACGACAACCTTCCA ATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTG ]
[+] EMBL BX621060 [ AAACACAAAACCATCTGTGGTGGTTGTTTTTTATTCGTGGCCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCA ATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACNATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACT ]
[+] EMBL CNS09JPE [ AAACCATCTGTGGTGGTCGTTTTTTATTCGTGGCCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACACAACCGGAAAGAGAGCAACGACCGCCGCGC GTGAAGGAAACGACAACCTTCCA ATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTGAGAAGACGATGTA GGGGGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTAACTCAGTTGGATGAAGTTATGAGTCATGACCGATTAAATATCGATTCATGCCTAGCGGGCAGCACAGCAAAAACTGCCACTTTCCCGAACCGTGTGATAACCGATGGAGCCGTTGGTTACAGTTGCCATTAGCAAATAGCGGTGAATCAAGCTTTTGTTCAAGTTTCATTTCGATTAAAAGGAGCGTTTAAATT ]
[+] EMBL BM599149 [ ccgAAACCATCTGTGGTGGTCGTTTTTTATTCGTGGCCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGATTACGGTCCTGTGTTGTCTAATATATCAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGACAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCA ATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATAATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCGGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAG ]
[+] EMBL CNS08II8 [ CCATCTGTGGTGGTCGTTTTTTATTCGTGGCCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTG AGGCAACACAACCGGAAAGAGAGCAACGACCGCCGCGC GTGAAGGAAACGACAACCTTCCACATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCAAAAAAAGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTGAGAAGACGATGTA GGGGGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTAACTCAGTTGGATGAAGTTATGAGTCATGACCGATTAAATATCGATTCATGCCTAGCGGGCAGCACAGCAAAAACTGCCACTTTCCCGAACCGTGTGATAACCGATGGAGCCGTTGGTTACAGTTGCCATTAGCAAATAGCGGTGAATCAAGCTTT ]
[+] EMBL BM590933 [ ccgGTGGTGGTCGTTTTTTATTCGTGGCCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATCAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGACAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCA ATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATAATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCGGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGCAAAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATG ]
[+] EMBL BM654113 [ ccGGTCGTTTTTTATTCGTGGCCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATCAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGACAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCA ATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATAATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCCCGGGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGGGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCGGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTG ]
[+] EMBL BX617874 [ CATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAATCCAAATGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCA ATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC AA ]
[-] EMBL CNS08II9 [ GTGTTGTCTAATATATAAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTG AGGCAAAACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCA TTCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGATTAGAAGGATGCGGACGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC GGGGGGGTGTGCCGGTGGGCAGGCAAGAAAACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTGAGAAGACGATGTA GGGGGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTAACTCAGTTGGATGAAGTTATGAGTCATGACCGATTAAATATCGATTCATGCCTAGCGGGCAGCACAGCAAAAACTGCCACTTTCCCGAACCGTGTGATAACCGATGGAGCCGTTGGTTACAGTTGCCATTAGCAAATAGCGGTGAATCAAGCTTTTGTTCAAGTTTCATTTCGATTAAAAGGAGCGTTTAAATTTTA ]
[+] EMBL BM642708 [ ccgGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCA ATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTGAGAAGACGATGTAGGGGGGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTAACTCAGTT ]
[+] EMBL BM655278 [ cCGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCC GGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGC AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTGAGAAGACGATGTAGGGGGGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTAACTCAGTTGGATGAAGTTATGAGTCATGACCGATTAAATATCGATTCATGCCTAGCGGGCAGCACAGCAAAAACTGCCACTTTCCCGAACCGTGTGATAACCGATGGAGCCGTTGGTTGCAGTTGCCATTAGCAAATAGCGGTGAAT ]
[-] EMBL CNS09JPF [ aCGCCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAAAATCCCCAAACCCCCCGTTCCTGGACTAGC AAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTGAGAAGACGATGTA GGGGGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTAACTCAGTTGGATGAAGTTTTGAGTCATGACCGATTAAATATCGATTCATGCCTAGCGGGCAGCACAGCAAAAACTGCCACTTTCCCGAACCGTGTGATAACCGATGGAGCCGTTGGTTACAGTTGCCATTAGCAAATAGCGGTGAATCAAGCTTTTGTTCAAGTTTCATTTCGATTAAAAGGAGCGTTTAAATTTTAAATACATTCGTACAGCCCCCGCAAACCAAAA]
[-] EMBL CNS094GU [ GGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTTACTCAGTTGGATGAAGTTTTGAGTCATGACCGATTAAATATCGATT ]
consensusID : consensus_9387#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 827 fasta sequence
[CCCCCCGGTTTNTGTGGTGGTTGTTTTTTATTCGTGGCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCAATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCCGGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGCATTTACCTTGGCTCGACTTAAACGATNCCCAAACCCCCGGTTCCTGGACTAGCAAACGCATCGGTGGCCTGCACCGCATCTGTTGCGCATATGTATTTTCATGTTGCTCNCCGNATGAGTCATCNTACCGGTGACCTACCCTATGCTGAGCCATTTAGCGGGTGTTGAAGTGAGAAGCACCGCATGTCACGGGGGCGCCGACCGGAAACCACATACNGCNACCATTTGCANAGGCNATCCAAACCCGACTAATTAGTAACTCAAGGTTGGTGAAGCTCNTGAG]
[+] EMBL AL695012 [CCCCCCGGTTTNTGTGGTGGTTGTTTTTTATTCGTGGCATTCTGCAGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCAATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGAACATGATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCCGGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCGGTCACGACCCGGTGGGCCCGACGGTTGCCGCCGATACCGCAACTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGAAGACGCTATAGATAGACTCGATGGTCGCATTTACCTTGGCTCGACTTAAACGATNCCCAAACCCCCGGTTCCTGGACTAGCAAACGCATCGGTGGCCTGCACCGCATCTGTTGCGCATATGTATTTTCATGTTGCTCNCCGNATGAGTCATCNTACCGGTGACCTACCCTATGCTGAGCCATTTAGCGGGTGTTGAAGTGAGAAGCACCGCATGTCACGGGGGCGCCGACCGGAAACCACATACNGCNACCATTTGCANAGGCNATCCAAACCCGACTAATTAGTAACTCAAGGTTGGTGAAGCTCNTGAG]
consensusID : consensus_9387#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 708 fasta sequence
[CCGCCCACGCGTCCGTATCAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGACAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCAATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATAATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCCGGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCGGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGCAAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTGAGAAGACGATGTAGGGGGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTAACTCAGGTTGGA]
[+] EMBL BM587215 [CCGCCCACGCGTCCGTATCAATCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGACAACACAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCAATCTCACACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTGTGGCACAAGTTCGTGCAGCCGATCCTGCTCAAGTACTGGAACCCCTGGGAGAAGAAGGATGCGGACGGCAACATAATCAAGACGGAGCCGAAAAATCCGTTCGACTGTGCCGGGGGGGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGGCCCGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCGGCAAGAAGACGCTATAGATAGACTCGATGGTCGATTTACTTGCTCGACTTAAACATCCCCAAACCCCCCGTTCCTGGACTAGCAAACGCATCGGTGGCTGCACCGCATCTGTGCGCATATGTATTTTCATGTGCTCACCGCATGAGTCATCTACCGCGTGCCTACCTATGCTGAGCATTAGCGGGTGTTTGAAGTGAGAAGACGATGTAGGGGGGCGACCGGAAACCACATACAGCAACATTTGAAAGCAATCAAACCGACTATTAGTAACTCAGGTTGGA]
consensusID : consensus_9387#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 565 fasta sequence
[ATGCAGAATCGCCCGAGGTAAAANGCTGGCAAACAAAACACAAAACATCTGTGGTGGTTGTTTTCTATTCGTGGCCATTCTGCAGCTTCCACCCATNTCGACTAGCTGTCCTTCGACTACGTGTCCTGTGTTGTCTAATATATAAATCCAAAGTGACTGCGGATTGCTTGCATCGATCTGCAAACTGTACCACTTGAGTAAGTGAGTATTCGGTGTAATTCTCCAGCAGCCCACACCTGCCTCATGCTCGTAACACTCATTCTCAAGNGGCAAGCACAACCGGAACAGAGAGCAACGACCGCNCGCGCGGTGAAGTGAAACTGACGAACTNTCCAATCTCACACCCGGAAGGAAAGAATGGTGTTGCGTGCCGCTGCTTCATTTGTTGGCCGTGCTTGGTCTACTGTGGCACAAATGTTCGGTGCCAGCGATCCTGGCTACAAGTACCTTGGAACCCCTGGGAGAAGAAGTGATTGCGGACGGGAACCATGATCAAGACTGGAGCCGAAAACAATCCTGTTCGAACTGTGCCCGGGCGGGGTGTGCCGGGTGGGGCAGGCAAGAA]
[+] EMBL AL933209 [ATGCAGAATCGCCCGAGGTAAAANGCTGGCAAACAAAACACAAAACATCTGTGGTGGTTGTTTTCTATTCGTGGCCATTCTGCAGCTTCCACCCATNTCGACTAGCTGTCCTTCGACTACGTGTCCTGTGTTGTCTAATATATAAATCCAAAGTGACTGCGGATTGCTTGCATCGATCTGCAAACTGTACCACTTGAGTAAGTGAGTATTCGGTGTAATTCTCCAGCAGCCCACACCTGCCTCATGCTCGTAACACTCATTCTCAAGNGGCAAGCACAACCGGAACAGAGAGCAACGACCGCNCGCGCGGTGAAGTGAAACTGACGAACTNTCCAATCTCACACCCGGAAGGAAAGAATGGTGTTGCGTGCCGCTGCTTCATTTGTTGGCCGTGCTTGGTCTACTGTGGCACAAATGTTCGGTGCCAGCGATCCTGGCTACAAGTACCTTGGAACCCCTGGGAGAAGAAGTGATTGCGGACGGGAACCATGATCAAGACTGGAGCCGAAAACAATCCTGTTCGAACTGTGCCCGGGCGGGGTGTGCCGGGTGGGGCAGGCAAGAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9387#0 GGCAAAAAAACAAACACAAAACCATCTGTGGTGGTCGTTTTTTATTCGTGGCCATTCTGC 60
consensus_9387#2 ------------------------------------------------------------
consensus_9387#1 ---------------CCCCCCGGTTTNTGTGGTGGTTGTTTTTTATTCGTGGCATTCTGC 45
consensus_9387#3 ------------------------------------------------------------
consensus_9387#0 AGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAA 120
consensus_9387#2 ---------------------------------------CCGCCCACGCGTCCGTATCAA 21
consensus_9387#1 AGCTTCCACCCATTCGACTAGTGTCCTTCGACTACGGTCCTGTGTTGTCTAATATATAAA 105
consensus_9387#3 ------------------------------------------------------------
consensus_9387#0 TCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACA 180
consensus_9387#2 TCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTG----AGACAACA 77
consensus_9387#1 TCCAAAGGACTGCGGATTGCTTGCATCGATCTGCAAACGTACCACTTGAGTAAGGCAACA 165
consensus_9387#3 ------------------------------ATGCAGAATCGCCCGAGGTAAAANGCTGGC 30
**** * ** * * *
consensus_9387#0 CAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCAATCTCA 240
consensus_9387#2 CAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCAATCTCA 137
consensus_9387#1 CAACCGGAAAGAGAGCAACGACCGCCGCGCGGTGAAGGAAACGACAACCTTCCAATCTCA 225
consensus_9387#3 AAACAAAACACAAAACATCTGTGGTGGTTGTTTTCTATTCGTGGCCATTCTGCAGCTTC- 89
*** * * * * ** * * * * * * * * ** **
consensus_9387#0 CACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTG 300
consensus_9387#2 CACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTG 197
consensus_9387#1 CACCCGGAAGAAAGAATGGTGTGCGTGCCGTGCTTCATTGTGCCCGTGCTGCTCTACCTG 285
consensus_9387#3 CACCCATNTCGACTAGCTGTCCTTCGACTACGTGTC-CTGTGTTGTCTAATATATAAATC 148
***** * * ** * * ** **** * ** *
consensus_9387#0 TGGCACAAGTTCGTGCAGCCGATCCTGCTCAA-GTACTGGAACCCCTGGGAGAAGAAGGA 359
consensus_9387#2 TGGCACAAGTTCGTGCAGCCGATCCTGCTCAA-GTACTGGAACCCCTGGGAGAAGAAGGA 256
consensus_9387#1 TGGCACAAGTTCGTGCAGC-GATCCTGCTCAA-GTACTGGAACCCCTGGGAGAAGAAGGA 343
consensus_9387#3 CAAAGTGACTGCGGATTGCTTGCATCGATCTGCAAACTGTACCACTTGAGTAAGTGAGTA 208
* * ** ** * ** **** * * * ** * * ** *
consensus_9387#0 TGCGGACGGCAACATGATCAAGACGGAGCCGAAAAATCCGTTCGAC---TGTGCCGGGGG 416
consensus_9387#2 TGCGGACGGCAACATAATCAAGACGGAGCCGAAAAATCCGTTCGAC---TGTGCCGGGGG 313
consensus_9387#1 TGCGGACGG-AACATGATCAAGACGGAGCCGAAAAATCCGTTCGAC---TGTGCCGGGGG 399
consensus_9387#3 TTCGGTGTAATTCTCCAGCAGCCCACACCTGCCTCATGCTCGTAACACTCATTCTCAAGN 268
* *** * * ** * * * * ** * ** * * *
consensus_9387#0 GGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGG-CC 475
consensus_9387#2 GGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCCCGGTCACGACCCGGTGGGGCC 373
consensus_9387#1 GGTGTGCCGGTGGGCAGGCAAGAAGACAGCTGTGCCGCC-GGTCACGACCCGGTGGG-CC 457
consensus_9387#3 GGCAAGC--ACAACCGGAACAGAGAGCAACGA--CCGCNCG--CGCGGTGAAGTGAA-AC 321
** ** * * *** ** * **** * * ** *** *
consensus_9387#0 CGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCAGCAAGA 535
consensus_9387#2 CGACGGTTGCCGCCGATACCGCAACCTCCGACGCTGTCGACGATGCTGCCAGCGGCAAGA 433
consensus_9387#1 CGACGGTTGCCGCCGATACCGCAAC-TCCGACGCTGTCGACGATGCTGCCAGCAGCAAGA 516
consensus_9387#3 TGACGAACTNT-CCAATCTCACACC--CGGAAGGAAAGAATGGTGTTGC----------- 367
**** ** ** * ** * * ** * * * ** ***
consensus_9387#0 AGACGCTATAGATAGACTCGATGGTCG-ATTTACTT--GCTCGACTTAAAC-ATCCCCAA 591
consensus_9387#2 AGACGCTATAGATAGACTCGATGGTCG-ATTTACTT--GCTCGACTTAAAC-ATCCCCAA 489
consensus_9387#1 AGACGCTATAGATAGACTCGATGGTCGCATTTACCTTGGCTCGACTTAAACGATNCCCAA 576
consensus_9387#3 --GTGCCGCTGCTTCATTTGTTGGCCGTGCTTGGTCTACTGTGGCACAAAT---GTTCGG 422
** * * * * * *** ** ** * * *** *
consensus_9387#0 ACCCCCCGTTCCTGGACTAGCAAACGCATCGGTGGC----TGCACCGCATCTGT-GCGCA 646
consensus_9387#2 ACCCCCCGTTCCTGGACTAGCAAACGCATCGGTGGC----TGCACCGCATCTGT-GCGCA 544
consensus_9387#1 ACCCCCGGTTCCTGGACTAGCAAACGCATCGGTGGCC---TGCACCGCATCTGTTGCGCA 633
consensus_9387#3 TGCCAGCGATCCTGG-CTA-CAAGTACCTTGGAACCCCTGGGAGAAGAAGTGATTGCGGA 480
** * ****** *** *** * * ** * * * * * *** *
consensus_9387#0 TATGTATTTTCATGT-GCTCACCGCATGAGTCATCT-ACCGCGTGCCTACC-TATGCTGA 703
consensus_9387#2 TATGTATTTTCATGT-GCTCACCGCATGAGTCATCT-ACCGCGTGCCTACC-TATGCTGA 601
consensus_9387#1 TATGTATTTTCATGTTGCTCNCCGNATGAGTCATCNTACCGGTGACCTACCCTATGCTGA 693
consensus_9387#3 CGGGAACCATGATCAAGACTGGAGCCGAAAACAATCCTGTTCGAACTGTGCCCGGGCGGG 540
* * * ** * * * ** * * ** *
consensus_9387#0 GCA--TTAGCGGGTGTTTGAAGTGAGAAG------ACGATGTAGGGGGGC-GACCGGAAA 754
consensus_9387#2 GCA--TTAGCGGGTGTTTGAAGTGAGAAG------ACGATGTAGGGGGGC-GACCGGAAA 652
consensus_9387#1 GCCATTTAGCGGGTGTT-GAAGTGAGAAGCACCGCATGTCACGGGGGCGCCGACCGGAAA 752
consensus_9387#3 GTG---TGCCGGGTGGGGCAGGCAAGAA-------------------------------- 565
* * ****** * * ****
consensus_9387#0 CCACATACAGCAAC-ATTTG--AAAGCAATCAAA--CCGACTA-TTAGTAACTCA-G-TT 806
consensus_9387#2 CCACATACAGCAAC-ATTTG--AAAGCAATCAAA--CCGACTA-TTAGTAACTCA-GGTT 705
consensus_9387#1 CCACATACNGCNACCATTTGCANAGGCNATCCAAACCCGACTAATTAGTAACTCAAGGTT 812
consensus_9387#3 ------------------------------------------------------------
consensus_9387#0 GGATGAAGTTATGAGTCATGACCGATTAAATATCGATTCATGCCTAGCGGGCAGCACAGC 866
consensus_9387#2 GGA--------------------------------------------------------- 708
consensus_9387#1 GGTGAAGCTCNTGAG--------------------------------------------- 827
consensus_9387#3 ------------------------------------------------------------
consensus_9387#0 AAAAACTGCCACTTTCCCGAACCGTGTGATAACCGATGGAGCCGTTGGTTACAGTTGCCA 926
consensus_9387#2 ------------------------------------------------------------
consensus_9387#1 ------------------------------------------------------------
consensus_9387#3 ------------------------------------------------------------
consensus_9387#0 TTAGCAAATAGCGGTGAATCAAGCTTTTGTTCAAGTTTCATTTCGATTAAAAGGAGCGTT 986
consensus_9387#2 ------------------------------------------------------------
consensus_9387#1 ------------------------------------------------------------
consensus_9387#3 ------------------------------------------------------------
consensus_9387#0 TAAATTTTAAATACATTCGTACAGCCCCCGCAAACCAAAA 1026
consensus_9387#2 ----------------------------------------
consensus_9387#1 ----------------------------------------
consensus_9387#3 ----------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||