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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9389#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1328 fasta sequence
[TGGATGTTCCCCCCTTCTATCGTCACGGTTCGGAGTGAACAGAAAAGCAATCGTTTCGCCGCTGCCTATTACACGGTTCAGTTCTGGTCCATACCATTGCATAAG-TTGCAAAGCCCCCGTATTAGTAGGCCCCACCAATGGGTAAATTAAATATCGCAACTATAACCTCACACGACACCGAACAACCGGCCGATTCGATCGAATGGTGTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACCAGCACGAGCGCGATGAAGAACCGTCCTCCGCAAATCGAGTAGGCCGAATACTATTGTACCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAAAATGGAACCCACGGACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCCCTGTCCGACACATCCGGACAGCTTCAGCTCGAACCACAGATAACGGCAACGCTTG-CGGGCGATGAAACCGAGGAGCGTAATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACGG-ATCGCTGTAAG-ATATTCGCACGGTTGCATCCAGCTGTTGAACGTTGAGGATGGTCTCCAGCCCGTGCACAGCTGGAAGGTGCACGGGTTTGAAGCGTGGACGTGTGCGTTTAGTCGGCATAACGAAAATATCGTCTTCAGTGGTAAGTGAATGGAATTGCTTACCGACGGTTCCGCCGCCTTCAAATTACTCACACAGATGGAATCTATTTGG-CAGGTGGCGACGATTGCTTTCTGTGTGCGCACGACGTACGCTGTCCGGGCGAACCGATCATGAAGGGTAAAAATAAAACTCACTCGGCGGGAGTCACCTCTTTACTGTCCTTTGCCGGGCGGGATCACATTCTACTCACCGGAAGCTACGATGAAAACGTACGTCTGTTTGACGAACGGCAGCTGAAGTGTAGCGTTTCCGAACTGCCGCTGCACGGTGGCGTCTGGCGCTTGCGGTCGAATCCACTCCGCGAGCCGGATGCAATTCTGTGCGCCTGCATGTATCATAACTTTAGCGTGGTTCAGCTTAATGCAGACGATTCGTTCGAGCTGGTTGGAGTGTACGGGGAACATGAGAGCATCTGCTATGGTTGTGATTGGCAACAGGTGGGGAAAGGCTACGTTCCGGTAGAAACGTGATAGCGACTTGCTCGTTTTACGATCATAAACTATGCGTATCGGAGGTAACTGTAGCTTAGCTAGGTTAATAAATATACGAACGGGGCGCAGAAAAAAAAAAAAA]
[+] EMBL CNS08L19 [TGGATGTTCCCCCCTTCTATCGTCACGGTTCGGAGTGAACAGAAAAGCAATCGTTTCGCCGCTGCCTATTACACGGTTCAGTTCTGGTCCATACCATTGCATAAG TTGCAAAGCCCCCGTATTAGTAGGCCCCACCAATGGGTAAATTAAATATCGCAACTATAACCTCACACGACACCGAACAACCGGCCGATTCGATCGAATGGTGTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACCAGCACGAGCGCGATGAAGAACCGTCCTCCGCAAATCGAGTAGGCCGAATACTATTGTACCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAAAATGGAACCCACGGACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCCCTGTCCGACACATCCGGACAGCTTCAGCTCGAACCACAGATAACGGCAACGCTTG CGGGCGATGAAACCGAGGAGCGTAATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACGGTATCGCTGTAAG ATGTCCGCACGGTTGCATCCAGCTGTTGAACGTTGAGGATGGTCTCCAGCCCGTGCACAGCTGGAAGGTGCACGGGTTTGAAGCGTGGACGTGTGCGTTTAGTCGGCATAACGAAAATATCGTCTTCAGTGGTAAGTGAATGGAATTGCTTACCGACGGTTCCGCCGCCTTCAAATTACTCACACAGATGGAATCTATTTGG CAGGTGGCGACGATTGCTTTCTGTGTGCGCACGACGTACGCTGTCCGGGCGAACCGATCATGAAGGGTAAAAATAAAACTCACTCGGCGGGAGTCA CTCTTTACTGTCCTTTGCCGGGCGGGATCACATTCTACTCACCGGAAGCTACGATGAAAACGTACGTCTGTGTGACGAACGGCAGCT ]
[+] EMBL CNS09OTH [ CACGGTTCGGAGTGAACAGAAAAGCAATCGTTTCGCCGCTGCCTATTACACGGTTCAGTTCTGGTCCATACCATTGCATAAG TTGCAAAGCCCCCGTATTAGTAGGCCCCACCAATGGGTAAATTAAATATCGCAACTATAACCTCACACGACACCGAACAACCGGCCGATTCGATCGAATGGTGTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACCAGCACGAGCGCGATGAAGAACCGTCCTCCGCAAATCGAGTAGGCCGAATACTATTGTACCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAAAATGGAACCCACGGACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCCCTGTCCGACACATCCGGACAGCTTCAGCTCGAACCACAGATAACGGCAACGCTTG CGGGCGATGAAACCGAGGAGCGTAATCTGTGAGCGTTGGGGCTTGATTGGTCGCCCGATGGAAAACGG ATCGCTGTAAG ATATACGCACGGTTGCATCCAGCTGTTGAACGTTGAGGATGGTCTCCAGCCCGTGCACAGCTGGAAGGTGCACGGGTTTGAAGCGTGGACGTGTGCGTGTAGTCGGCATAACGAAAATATCGT ]
[+] EMBL CNS09GD4 [ TTC GAATGAACAGAAAAGCAATCGTTTCGCCGCTGCCTATTACGCGGTTCAGTTCTGGTCCATACCATTGCATAAG TTGCAAAGCCCCCGTATTAGTAGGCCCCACCAATGGGTAAATTAAATATCGCAACTATAACCTCACACGACACCGAGCAACCGGCCGATTCGATCGAATGGTGTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACCAGCACGAGCGCGATGAAGAACCGTCCTCCGCAAATCGAGTAGGCCGAATACTATTGTACCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAAAATGGAACCCACGGACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCCCTGTCCGACACATCCGGACAGCTTCAGCTCGAACCACAGATAACGGCAACGCTTG CGGGCGATGAAACCGAGGAGCGTAATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACGG ATCGCTGTA ]
[+] EMBL CNS08CEK [ AGTGAACAGAAAAGCAATCGTTTCACCGCTGCCTATTACACGGTTCAGTTCTGATCCATACCATTGCATCAG TTGCAAAGCCCCCATATAAGAAGACCCCACCAATGGGTAAATTAAATATCGAAACTATAACCTCACACGACACCGAACAACCGGCCGATTCGATCGAATGGTGTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACCAGCACGAGCGCGATGAAGAACCGTCCTCCGCAAATCGAGTAGGCCGAATACTATTGTACCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAAAATGGAACCCACGGACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTATCACTCTACGCCCTGTCCGACACATCCGGACAGCTTCAGCTCGAACCACAGACAACGGCAACGCTTG CGGGCGATGAAACCGAGGAGCGTAATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACGG ATCGCTGTAAGCAT TTCGCACGGTTGCATCCAGCTGTTTAACGTTGAG ]
[+] EMBL CNS08LDO [ TGAACAGAAAAGCAATCGTTTCGCCGCTGCCTATTACACGGTTCAGTTCTGGTCCATACCATTGCATAAGCTTGCAAAGCCCCCGTATTAGTAGGCCCCACCAATGGGTAAATTAAATATCGCAACTATAACCTCACACGACACCGAACAACCGGCCGATTCGATCGAATGGTGTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACCAGCACGAGCGCGATGAAGAACCGTCCTCCGCAAATCGAGTAGGCCGAATACTATTGTACCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAAAATGGAACCCACGGACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCCCTGTCCGACGTATCCGGACAGCTTCAGCTCGAACCACAGATAACGGCAACGCTTGCCCGGCGATGAAACCGAGGAGCGTAA ]
[+] EMBL CNS08MLU [ ATTAAATATCGCAACTATAACCTCACACGACACCGAACAACCGGCCGATTCGATCGAATGGTGTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACCAGCACGAGCGCGATGAAGAACCGTCCTCCGCAAATCGAGTAGGCCGAATACTATTGTACCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAAAATGGAACCCACGGACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAACACTCTACGCCCTGTCCGACACATCCGGACAGCTTCAGCTCGAACCACAGATAACGGCAACGCTTG CGGGCGATGAAACCGAGGAGCGTAATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACGG ATCGCTGTAAG ATTCGCACGGTTGCATCCAGCTGTTGAACGTTGA ]
[-] EMBL CNS08L1A [ GTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCCCTGTCCGAAACATCCGGACAGCTTCAGCTCGAACCACAGATAACGGCAACGCTTG CGGGCGATGAAACCGAGGAGCGTAATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACGG ATCGCTGTAAG CGATTCGCACGGTTGCATCCAGCTGTTGAACGTTGAGGATGGTCTCCAGCCCGTGCACAGCTGGAAGGTGCACGGGTTTGAAGCGTGGACGTGTGCGTTTAGTCGGCATAACGAAAATATCGTCTTCAGTGGTAAGTGAATGGAATTGCTTACCGACGGTTCCGCCGCCTTCAAATTACTCACACAGATGGAATCTATTTGG CAGGTGGCGACGATTGCTTTCTGTGTGCGCACGACGTACGCTGTCCGGGCGAACCGATCATGAAGGGTAAAAATAAAACTCACTCGGCGGGAGTCACCTCTTTACTGTCCTTTGCCGGGCGGGATCACATTCTACTCACCGGAAGCTACGATGAAAACGTACGTCTGTTTGACGAACGGCAGCTGAAGTGTAGCGTTTCCGAACTGCCGCTGCACGGTGGCGTCTGGCGCTTGCGGTCGAATCCACTCCGCGAGCCGGATGCAATTCTGTGCGCCTGCATGTATCATAACTTTAGCGTGGTTCAGCTTAATGCAGACGATTCGTTCGAGCTGGTTGGAGTGTACGGGGAACATGAGAGCATCTGCTATGGTTGTGATTGGCAACAGGTGGGGAAAGGCTACGTTCCGGTAGAAACGTGATAGCGACTTGCTCGTTTTACGATCATAAACTATGCGTATCGGAGGTAACTGTAGCTTAGCTAGGTTAATAAATATACGAACGGGGCGCAGAAAAAAAAAAAAA]
[-] EMBL CNS08LDP [ GCATCCAGCTGTTGAACGTTGAGGATGGTCTCCAGCCCGTGCACAGCTGGAAGGTGCACGGGTTTGAAGCGTGGACGTGTGCGTTTAGTCGGCATAACGAAAATATCGTCTTCAGTGGTAAGTGAATGGAATTGCTTACCGACGGTTCCCCCGCCTTCAAATAACTCACACAGATGGAATCTATTTGG CAGGTGGCGACGATTGCT ]
[-] EMBL CNS08MLV [ agCGGTTCCGCCGCCTTCAAATTACTCACACAGATGGAATCTATTTGGTCAGGTGGCGACGATTGCTTTCTGTGTGCGCACGACGTACGCTGTCCGGGCGAACCGATCATGAAGGGTAAAAATAAAACTCACTCGGCGGGAGTCACCTCTTGACTGTCCTTTGCCGGGCGGGATCACATTCTACTCACCGGAAGCTACGATGAAAACGTACGTCTGTTTGACGAACGGCAGCTGAAGTGTAGCGTTTCCGAACTGCCGCTGCACGGTGGCGTCTGGCGCTTGCGGTCGAATCCACTCCGCGAGCCGGATGCAATTCTGTGCGCCTGCATGTATCATAACTTTAGCGTGGTTCAGCTTAATGCAGACGATTCGTTCGAGCTGGTTGGAGTGTACGGGGAACATGAGAGCATCTGC ]
consensusID : consensus_9389#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1326 fasta sequence
[TTGAACAGAAAAGCAATCGTTTCGCCGCTGCCTATTACACCGTTCAGATCTGGTAAGTGATCTTGCAAAAGTCTATGGGCAATCAGCTAATGAATGGCACCATCCGATGATGAGCTGGCTCAATTACACATCCTAACAAAAAGAACCGTAAAACACGTGTTCCGTCACCATTAGGCCATACCATTGCATCCATTGCATCAGTTGCAAAGCCCCCGTATTAGTAGGCCCCACCAATGGGTAAATTAAATATCGAAACTATAACCTCACACGACACCGAACAACCGGCCGATTCGATCGAATGGTGTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACCAGCACGAGCGCGATAAAGATCCGTCCTCCGCAAATCGAGTAGGCCGAATACTATTGTACCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAAAATGGAACCCACGGACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCCCTGTCCGACACATCCGGACAGCTTCAGCTCGAACCACAGACAACNGGCAACGCTTGCGGGCGATGAAACCGAGGAGCGTAATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACGGATCGCTGTAAGCGATTCGCACGGTTGCATCCAGCTGTTGAACGTTGAGGATGGTCTCCAGCCCGTGCACAGCTGGAAGGTGCACGGGTTTGAAGCGTGGACGTGTGCGTTTAGTCGGCATAACGAAAATATCGTCTTCAGTGGTGGCGACGATTGCTTTCTGTGTGCGCACGACGTACGCTGTCCGGGCGAACCGATCATGAAGGGTAAAAATAAAACTCACT-CGGCGGGAGTCAC-CTCTTTACTGTCCTTTGCCGGGCGGGATCACATTCTACTCACCGGAAGCTACGATGAAAACGTACGTCTGTTTGACGAACGGCAGCTGAAGTGTAGCGTTTCCGAACTGCCGCTGCACGGTGGCGTCTGGCGCTTGCGGTCGAATCCACTCCGCGAGCCGGATGCAATTCTGTGCGCCTGCATGTATCATAACTTTAGCGTGGTTCAGCTTAATGCAGACGATTCGTTCGAGCTGGTTGGAGTGTACGGGGAACATGAGAGCATCTGCTATGGTTGTGATTGGCAACAGGTGGGGAAAGGCTACGTTCCGGTAGAAACGTGATAGCGACTTGCTCGTTTTACGATCATAAACTATGCGTATCGGAAGTAACTGTAGCTTAGCTAGGTTAATAAATATACG]
[+] EMBL BX628347 [TTGAACAGAAAAGCAATCGTTTCGCCGCTGCCTATTACACCGTTCAGATCTGGTAAGTGATCTTGCAAAAGTCTATGGGCAATCAGCTAATGAATGGCACCATCCGATGATGAGCTGGCTCAATTACACATCCTAACAAAAAGAACCGTAAAACACGTGTTCCGTCACCATTAGGCCATACCATTGCATCCATTGCATCAGTTGCAAAGCCCCCGTATTAGTAGGCCCCACCAATGGGTAAATTAAATATCGAAACTATAACCTCACACGACACCGAACAACCGGCCGATTCGATCGAATGGTGTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACCAGCACGAGCGCGATAAAGATCCGTCCTCCGCAAATCGAGTAGGCCGAATACTATTGTACCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAAAATGGAACCCACGGACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCCCTGTCCGACACATCCGGACAGCTTCAGCTCGAACCACAGACAACNGGCAACGCTTGCGGGCGATGAAACCGAGGAGCGTAATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACng ]
[+] EMBL AGA281959 [ CATCCTAACAAAAAGAACCGTCAAACACGTGTTCCGTCACCATTAGGCCATACCATTGCATCCATTGCATCAGTTGCAAAGCCCCCGTATTAGTAGGCCCCACCAATGGGTAAATTAAATATCGAAACTATAACCTCACACGACACCGAACAACCGGGCGATTCGATCGAATGGTGTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACCAGCACGAGCGCGATAAAGATCCGTCCTCCGCAAATCGAGTAGGCCGAATACTATTGTACCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACAAA ]
[-] EMBL CNS08CEL [ caAACCACAGACAAC GGCAACGCTTGCGGGCGATGAAACCGAGGAGCGTAATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACGGATCGCTGTAAGCGATTCGCACGGTTGCATCCAGCTGTTGAACGTTGAGGATGGTCTCCAGCCCGTGCACAGCTGGAAGGTGCACGGGTTTGAAGCGTGGACGTGTGCGTTTAGTCGGCATAACGAAAATATCGTCTTCAGTGGTGGCGACGATTGCTTTCTGTGTGCGCACGACGTACGCTGTCCGGGCGAACCGATCATGAAGGGTAAAAATAAAACTCACTCCGGCGGGAGTTAC CTCTCTACTGTCCTTTGCCGGGCGGGATCACATTCTACTCACCGGAAGCTACGATGAAAACGTACGTCTGTTTGACGAACGGCAGCTGAAGTGTAGCGTTTCCGAACTGCCGCTGCACGGTGGCGTCTGGCGCTTGCGGTCGAATCCACTCCGCGAGCCGGATGCAATTCTGTGCGCCTGCATGTATCATAACTTTAGCGTGGTTCAGCTTAATGCAGACGATTCGTTCGAGCTGGTTGGAGTGTACGGGGAACATGAGAGCATCTGTTACGGTTGTGATTGGCAACAGGTAGAGAAAGGCTACGTTCCGGTAGAAACGTGATAGCGACATGCTCGTTTTACGATCATAAACTATGCGTATCGGAAGTAACTGTAGCTTA ]
[-] EMBL CNS09GD5 [ GCTTGCGGGCGATGAAACCGAGGAGCGTAATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACGGATCGCTGTAAGCGATTCGCACGGTTGCATCCAGCTGTTGAACGTTGAGGATGGTCTCCAGCCCGTGCACAGCTGGAAGGTGCACGGGTTTGAAGCGTGGACGTGTGCGTTTAGTCGGCATAACGAAAATATCGTCTTCAGTGGTGGCGACGATTGCTTTCTGTGTGCGCACGACGTACGCTGTCCGGGCGAACCGATCATGAAGGGTAAAAATAAAACTCACT CGGCGGGAGTCAC CTCTTTACTGTCCTTTGCCGGGCGGGATCACATTCTACTCACCGGAAGCTACGATGAAAACGTACGTCTGTTTGACGAACGGCAGCTGAAGTGTAGCGTTTCCGAACTGCCGCTGCACGGTGGCGTCTGGCGCTTGCGGTCGAATCCACTCCGCGAGCCGGATGCAATTCTGTGCGCCTGCATGTATCATAACTTTAGCGTGGTTCAGCTTAATGCAGACGATTCGTTCGAGCTGGTTGGAGTGTACGGGGAACATGAGAGCATCTGCTATGGTTGTGATTGGCAACAGGTGGGGAAAGGCTACGTTCCGGTAGAAACGTGATAGCGACTTGCTCGTTTTACGATCATAAACTATGCGTATCGG ]
[-] EMBL CNS09A3J [ GCCCGAGGGAAAACGGAGCGCGGGAAGCGATTCGCACGGTTGCATCCAGCTGTTGAACGTTGAGGATGGTCTCCAGCCCGTGCACAGCTGGAAGGTGCACGGGTTTGAAGCGTGGACGTGTGCGTTTAGTCGGCATAACGAAAATATCGTCTTCAGTGGTGGCGACGATTGCTTTCTGTGTGCGCACGACGTACGCTGTCCGGGCGAACCGATCATGAAGGGTAAAAATAAAACTCACT CGGCGGGAGTCACACTCTTTACTGTCCTTTGCCGGGCGGGATCACATTCTACTCACCGGAAGCTACGATGAAAACGTACGTCTGTTTGACGAACGGCAGCTGAAGTGTAGCGTTTCCGAACTGCCGCTGCACGGTGGCGTCTGGCGCTTGCGGTCGAATCCACTCCGCGAGCCGGATGCAATTCTGTGCGCCTGCATGTATCATAACTTTAGCGTGGTTCAGCTTAATGCAGACGATTCGTTCGAGCTGGTTGGAGTGTACGGGGAACATGAGAGCATCTGCTATGGTTGTGATTGGCAACAGGTGGGGAAAGGCTACGTTCCGGTAGAAACGTGATAGCGACTTGCTCGTTTTACGATCATAAACTATGCGTATCGGAGGTAACTGTAGCTTAGCTAGGTTAATAAATATACG]
consensusID : consensus_9389#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 868 fasta sequence
[CCCTGTTCTCTGTTCTATCGTCACGGTTCGGAGTGAACAGAAAAGCAATCGTTTCGCCGCTGCCTATTACACGGTTCAGTTCTGGTCCATACCATTGCATAAGTTGCAAAGCCCCCGTATTAGTAGGCCGAATACTATTGTACCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAAAATGGAACCCACGGACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCCCTGTCCGACACATCCGGACAGCTTCAGCTCGAACCACAGATAACGGCAACGCTTGCGGGCGATGAAACCGAGGAGCGTAATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACGGATCGCTGTAAGATCTCGCACGGTTGCATCCAGCTGTTGAACGTTGAGGATGGTCTCCAGCCCGTGCACAGCTGGAAGGTGCACGGGTTTGAAGCGTGGACGTGTGCGTTTAGTCGGCATAACGAAAATATCGTCTTCAGTGGTGGCGACGATTGCTTTCTGTGTGCGCACGACGTACGCTGTCCGGGCGAACCGATCATGAAGGGTAAAAATAAAACTCACTCGGCGGGAGTCACCTCTTTACTGTCCTTTGCCGGGCGGGATCACATTCTACTCACCGGAAGCTACGATGAAAACGTACGTCTGTTTGACGAACGGCAGCTGAAGTGTAGCGTTTCCGAACTGCCGCTGCACGGTGGCGTCTGGCGCTTGCGGTCGAATCCACTCCGCGAGCCGGATGCAATTCTGTGCGCCTGCATGTATCATAACTTTAGCGTGGTTCAG]
[+] EMBL CNS09A3I [CCCTGTTCTCTGTTCTATCGTCACGGTTCGGAGTGAACAGAAAAGCAATCGTTTCGCCGCTGCCTATTACACGGTTCAGTTCTGGTCCATACCATTGCATAAGTTGCAAAGCCCCCGTATTAGTAGGCCGAATACTATTGTACCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAAAATGGAACCCACGGACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCCCTGTCCGACACATCCGGACAGCTTCAGCTCGAACCACAGATAACGGCAACGCTTGCGGGCGATGAAACCGAGGAGCGTAATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACGGATCGCTGTAAGATCTCGCACGGTTGCATCCAGCTGTTGAACGTTGAGGATGGTCTCCAGCCCGTGCACAGCTGGAAGGTGCACGGGTTTGAAGCGTGGACGTGTGCGTTTAGTCGGCATAACGAAAATATCGTCTTCAGTGGTGGCGACGATTGCTTTCTGTGTGCGCACGACGTACGCTGTCCGGGCGAACCGATCATGAAGGGTAAAAATAAAACTCACTCGGCGGGAGTCACCTCTTTACTGTCCTTTGCCGGGCGGGATCACATTCTACTCACCGGAAGCTACGATGAAAACGTACGTCTGTTTGACGAACGGCAGCTGAAGTGTAGCGTTTCCGAACTGCCGCTGCACGGTGGCGTCTGGCGCTTGCGGTCGAATCCACTCCGCGAGCCGGATGCAATTCTGTGCGCCTGCATGTATCATAACTTTAGCGTGGTTCAG]
consensusID : consensus_9389#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 493 fasta sequence
[AGAATCCCCCCGAGGTTGATTTGGATTGAACAGAAAAGCAATCGTTTCGCCGCTGCCTATTACACCGTTCAGATCTGGTCACCATTAGGCCATACCATTGCATCCATTGCATCAGTTGCAAAGCCCCCGTATTAGTAGGCCCCACCAATGGGTAAATTAAATATCGAAACTATAACCTCACACGACACCGAACAACCGGCCGATTCGATCGAATGGTGTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACCAGCACGAGCGCGATAAAGATCCGTCCTCCGCAAATCGAGTAGGCCGAATACTATTGTACCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAAAATGGAACCCACGGACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCCCTGTCCGACACAT]
[+] EMBL AL694667 [AGAATCCCCCCGAGGTTGATTTGGATTGAACAGAAAAGCAATCGTTTCGCCGCTGCCTATTACACCGTTCAGATCTGGTCACCATTAGGCCATACCATTGCATCCATTGCATCAGTTGCAAAGCCCCCGTATTAGTAGGCCCCACCAATGGGTAAATTAAATATCGAAACTATAACCTCACACGACACCGAACAACCGGCCGATTCGATCGAATGGTGTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACCAGCACGAGCGCGATAAAGATCCGTCCTCCGCAAATCGAGTAGGCCGAATACTATTGTACCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAAAATGGAACCCACGGACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCCCTGTCCGACACAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9389#0 ------------------------------------------------------------
consensus_9389#3 ------------------------------------------------------------
consensus_9389#1 TTGAACAGAAAAGCAATCGTTTCGCCGCTGCCTATTACACCGTTCAGATCTGGTAAGTGA 60
consensus_9389#2 ------------------------------------------------------------
consensus_9389#0 ---------------TGGATGTTCCCCCCTTCTATCGTCACGGTTCGGAGTGAACAGAA- 44
consensus_9389#3 ------------------AGAATCCCCCC----GAGGT--TGATTTGGATTGAACAGAA- 35
consensus_9389#1 TCTTGCAAAAGTCTATGGGCAATCAGCTAATGAATGGCACCATCCGATGATGAGCTGGCT 120
consensus_9389#2 -----------------CCCTGTTCTCTGTTCTATCGTCACGGTTCGGAGTGAACAGAA- 42
* * * *** * *
consensus_9389#0 -AAGCAATCGTTTCGCCGCTGCCTATTACACGGTTCAGTTCTGGTC----------CATA 93
consensus_9389#3 -AAGCAATCGTTTCGCCGCTGCCTATTACACCGTTCAGATCTGGTCACCATTAGGCCATA 94
consensus_9389#1 CAATTACACATCCTAACAAAAAGAACCGTAAAACACGTGTTCCGTCACCATTAGGCCATA 180
consensus_9389#2 -AAGCAATCGTTTCGCCGCTGCCTATTACACGGTTCAGTTCTGGTC----------CATA 91
** * * * * * * * * *** ****
consensus_9389#0 CCATTGCATA---------AGTTGCAAAGCCCCCGTATTAGTAGGCCC--CACCAATGGG 142
consensus_9389#3 CCATTGCATCCATTGCATCAGTTGCAAAGCCCCCGTATTAGTAGGCCC--CACCAATGGG 152
consensus_9389#1 CCATTGCATCCATTGCATCAGTTGCAAAGCCCCCGTATTAGTAGGCCC--CACCAATGGG 238
consensus_9389#2 CCATTGCATA---------AGTTGCAAAGCCCCCGTATTAGTAGGCCGAATACTATTGTA 142
********* **************************** ** * **
consensus_9389#0 TAAATTAAATATCGCAAC---------TATAACCTCACACGACACCGAACAACCGGCCGA 193
consensus_9389#3 TAAATTAAATATCGAAAC---------TATAACCTCACACGACACCGAACAACCGGCCGA 203
consensus_9389#1 TAAATTAAATATCGAAAC---------TATAACCTCACACGACACCGAACAACCGGCCGA 289
consensus_9389#2 CCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACA 202
** * * * * * * * * * ** ** * *
consensus_9389#0 TTCGATCGAATGGT-GTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACC 252
consensus_9389#3 TTCGATCGAATGGT-GTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACC 262
consensus_9389#1 TTCGATCGAATGGT-GTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACC 348
consensus_9389#2 AACGATTGACAGGTCGGCCGTTTTAGATCAAAAATGGAACCCACGGACAAACCATCAACT 262
**** ** *** * *** * * * * ** * ** * **
consensus_9389#0 AGCACGAGCGCGATGAAGAACCGTCCTCCGCAAATCGAGTAG-GCCGAATACTATTGTAC 311
consensus_9389#3 AGCACGAGCGCGATAAAGATCCGTCCTCCGCAAATCGAGTAG-GCCGAATACTATTGTAC 321
consensus_9389#1 AGCACGAGCGCGATAAAGATCCGTCCTCCGCAAATCGAGTAG-GCCGAATACTATTGTAC 407
consensus_9389#2 GGCGGTGGC-CGGTGCCGATGGAACGCTAGCACTCTACGCCCTGTCCGACACATCCGGAC 321
** ** ** * ** * *** * * * * ** * **
consensus_9389#0 CGGTTCGGTGCTGGAC-CGGACGGTGGTGG-ACCTACGGATGATACGCTC---------- 359
consensus_9389#3 CGGTTCGGTGCTGGAC-CGGACGGTGGTGG-ACCTACGGATGATACGCTC---------- 369
consensus_9389#1 CGGTTCGGTGCTGGAC-CGGACGGTGGTGG-ACCTACGGATGATACGCTC---------- 455
consensus_9389#2 AGCTTCAGCTCGAACCACAGATAACGGCAACGCTTGCGGGCGATGAAACCGAGGAGCGTA 381
* *** * * * * ** ** * * *** *** *
consensus_9389#0 --TCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAA--AATGGAACCCACG 415
consensus_9389#3 --TCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAA--AATGGAACCCACG 425
consensus_9389#1 --TCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAA--AATGGAACCCACG 511
consensus_9389#2 ATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACGGATCGCTGTAAGATCTC 441
* * ** **** ***** *** * * * * * ** **
consensus_9389#0 GACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCC-CTGT 474
consensus_9389#3 GACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCC-CTGT 484
consensus_9389#1 GACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCC-CTGT 570
consensus_9389#2 GCACGGTTGCATCCAGCTGTTGAACGTTGAGGATGGT-CTCCAGC-CCGTGCACAGCTGG 499
* * * * ** ** ** ***** * * *** * * * * ***
consensus_9389#0 CCGACACATCCGGACAGCTTCAGCTCGAACCACAGATAACGG-CAACGCTTGCGGGCGAT 533
consensus_9389#3 CCGACACAT--------------------------------------------------- 493
consensus_9389#1 CCGACACATCCGGACAGCTTCAGCTCGAACCACAGACAACNGGCAACGCTTGCGGGCGAT 630
consensus_9389#2 AAGGTGCACGGGTTTGAAGCGTGGACGTGTGCGTTTAGTCGGCATAACGAAAATATCGTC 559
* **
consensus_9389#0 GAAACCGAGGAGCGTAATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACGG 593
consensus_9389#3 ------------------------------------------------------------
consensus_9389#1 GAAACCGAGGAGCGTAATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACGG 690
consensus_9389#2 TTCAGTGGTGGCGACGATTGCTTTCTGTGTGCGCACGACGTACGCTGTCCGGGCGAACCG 619
consensus_9389#0 ATCGCTGTAAGATATTCGCACGGTTGCATCCAGCTGTTGAACGTTGAGGATGGTCTCCAG 653
consensus_9389#3 ------------------------------------------------------------
consensus_9389#1 ATCGCTGTAAGCGATTCGCACGGTTGCATCCAGCTGTTGAACGTTGAGGATGGTCTCCAG 750
consensus_9389#2 ATCATGAAGGGTAAAAATAAAACTCACTCGGCGGGAGTCACCTCTTTACTGTCCTTTGCC 679
consensus_9389#0 CCCGTGCACAGCTGGAAGGTGCACGGGTTTGAAGCGTGGACGTGTGCGTTTAGTCGGCAT 713
consensus_9389#3 ------------------------------------------------------------
consensus_9389#1 CCCGTGCACAGCTGGAAGGTGCACGGGTTTGAAGCGTGGACGTGTGCGTTTAGTCGGCAT 810
consensus_9389#2 GGGCGGGATCACATTCTACTCACCGGAAGCTACGATGAAAACGTACGTCTGTTTGACGAA 739
consensus_9389#0 AACGAAAATATCGTCTTCAGTGGTAAGTGAATGGAATTGCTTACCGACGGTTCCGCCGCC 773
consensus_9389#3 ------------------------------------------------------------
consensus_9389#1 AACGAAAATATCGTCTTCAGTGGTGGCGACGATTGCTTTCTGTGTGCGCACGACGTACGC 870
consensus_9389#2 CGGCAGCTGAAGTGTAGCGTTTCCGAACTGCCGCTGCACGGTGGCGTCTGGCGCTTGCGG 799
consensus_9389#0 TTCAAATTACTCACACAGATGGAATCTATTTGGCAGGTGGCGACGATTGCTTTCTGTGTG 833
consensus_9389#3 ------------------------------------------------------------
consensus_9389#1 TGTCCGGGCGAACCGATCATGAAGGGTAAAAATAAAACTCACTCGGCGGGAGTCACCTCT 930
consensus_9389#2 TCGAATCCACTCCGCGAGCCGGATGCAATTCTGTGCGCCTGCATGTATCATAACTTTAGC 859
consensus_9389#0 CGCACGACGTACGCTGTCCGGGCGAACCGATCATGAAGGGTAAAAATAAAACTCACTCGG 893
consensus_9389#3 ------------------------------------------------------------
consensus_9389#1 TTACTGTCCTTTGCCGGGCGGGATCACATTCTACTCACCGGAAGCTACGATGAAAACGTA 990
consensus_9389#2 GTGGTTCAG--------------------------------------------------- 868
consensus_9389#0 CGGGAGTCACCTCTTTACTGTCCTTTGCCGGGCGGGATCACATTCTACTCACCGGAAGCT 953
consensus_9389#3 ------------------------------------------------------------
consensus_9389#1 CGTCTGTTTGACGAACGGCAGCTGAAGTGTAGCGTTTCCGAACTGCCGCTGCACGGTGGC 1050
consensus_9389#2 ------------------------------------------------------------
consensus_9389#0 ACGATGAAAACGTACGTCTGTTTGACGAACGGCAGCTGAAGTGTAGCGTTTCCGAACTGC 1013
consensus_9389#3 ------------------------------------------------------------
consensus_9389#1 GTCTGGCGCTTGCGGTCGAATCCACTCCGCGAGCCGGATGCAATTCTGTGCGCCTGCATG 1110
consensus_9389#2 ------------------------------------------------------------
consensus_9389#0 CGCTGCACGGTGGCGTCTGGCGCTTGCGGTCGAATCCACTCCGCGAGCCGGATGCAATTC 1073
consensus_9389#3 ------------------------------------------------------------
consensus_9389#1 TATCATAACTTTAGCGTGGTTCAGCTTAATGCAGACGATTCGTTCGAGCTGGTTGGAGTG 1170
consensus_9389#2 ------------------------------------------------------------
consensus_9389#0 TGTGCGCCTGCATGTATCATAACTTTAGCGTGGTTCAGCTTAATGCAGACGATTCGTTCG 1133
consensus_9389#3 ------------------------------------------------------------
consensus_9389#1 TACGGGGAACATGAGAGCATCTGCTATGGTTGTGATTGGCAACAGGTGGGGAAAGGCTAC 1230
consensus_9389#2 ------------------------------------------------------------
consensus_9389#0 AGCTGGTTGGAGTGTACGGGGAACATGAGAGCATCTGCTATGGTTGTGATTGGCAACAGG 1193
consensus_9389#3 ------------------------------------------------------------
consensus_9389#1 GTTCCGGTAGAAACGTGATAGCGACTTGCTCGTTTTACGATCATAAACTATGCGTATCGG 1290
consensus_9389#2 ------------------------------------------------------------
consensus_9389#0 TGGGGAAAGGCTACGTTCCGGTAGAAACGTGATAGCGACTTGCTCGTTTTACGATCATAA 1253
consensus_9389#3 ------------------------------------------------------------
consensus_9389#1 AAGTAACTGTAGCTTAGCTAGGTTAATAAATATACG------------------------ 1326
consensus_9389#2 ------------------------------------------------------------
consensus_9389#0 ACTATGCGTATCGGAGGTAACTGTAGCTTAGCTAGGTTAATAAATATACGAACGGGGCGC 1313
consensus_9389#3 ------------------------------------------------------------
consensus_9389#1 ------------------------------------------------------------
consensus_9389#2 ------------------------------------------------------------
consensus_9389#0 AGAAAAAAAAAAAAA 1328
consensus_9389#3 ---------------
consensus_9389#1 ---------------
consensus_9389#2 ---------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||