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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9390#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1041 fasta sequence
[TATTTGAGCTAGCTTTATGTCTTACCTTACTTTAAAAACCGTACAACCCGCTTGCCGGCCGGGTCATCGGTCACCCCTGAGTAGATAGGCCC-AGAAAGCGTACTTGGCGAACAGTACCACGGCAACGCA-TCCCGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCGCTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTGTGTAGGCCACGAGCAGCTTGC-GGTTCATTCAACCCGTTCGTTGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACTACCGCCGGCAGTTGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCACAATCTTGCCCGTGTCCTTTATGCTCGCCTCG-A-AGCGCTGCGCAATGTCCTCCTGCTTGGCCTTGTTGCCTGCCCCGTCGCCCGTTACCACGATACGCACCTCGTACGATTTGCTGAGCCACTTCAGCACGTTCTGGATCTTTGAGGCGAGATCGTGCTCGGCGATGCGGGCACTGATCGTCAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTCTGTACACTGGACGTTGCGTTTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCCGGCCTCATCTAAGTTTACAATCGAGATGGATTCGTCCGCAGCGATGAGCGTTACTTTTGGTGATGTTTTTGCCTTTTTGTTGTGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTTTCGATGTTTTCGTAGAATAAAATGGCACATTCCCTGGGGAAACCAATGCAGCACGGTTCCAGCTAGCAGGTGGATGGGCCAAGGGAAGCCGCCTTAGCTGTGGAACCACTAATCGGGTGATGAAATTCATTTTTTACTCGTTTTTTCGTCGTACAGAAAGAGAAGCGATGGAGATTTTTCGTAGATGCGGACGCGTGGGCGG]
[+] EMBL CNS08VN9 [TATTTGAGCTAGCTTTATGTCTTACCTTACTTTAAAAACCGTACAACCCGCTTGCCGGCCGGGTCATCGGTCACCCCTGAGTAGATAGGCCC AGAAAGCGTACTTGGCGAACAGTACCACGGCAACGCA TCCCGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCGCTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTTTGTAGGCCACGAGCAGCTTGCGGGTTCATTCAACCCGTTCGTTGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACTACCGCCGGCAGTGGGCAGGATGTTAAACCGTAAGTTGTTGTCCCGCAGCCGTTTCTGCACAATCTTGCCCGTTTCCTTTATGCTCGCCTCG A AGCGCTGCGCAATGTCCTCCTACTTGGCCTTGTTGCCTGCCCCGTCGCCCGTAACCACGATACGCACCTTGTACGATTTGCTGAGCCACTTCAGCACGTTCTGGATCTTTGAGGCGAGATCGTGCTCGGCGATGCGGGCACTGATCGTCAGCAGCTTGTTTTTTTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTCCGTTTAGGTATACCGAACCGGTCATCAGTTTGTACACTGGACGTTGCGTTTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCCGGCCTCATCTAAGTTTACAATCGAGATGGATCAATCCGCAGCGATGAGCGTTACTTTTGGTGATGTTTTTGCCTTTTTGTTGTGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTTTCGATGTTTTCGTAGAATAAAATGGCACATTCCCTGGGGAAACCAATGCAGCACGGTTCCAGCTAGCAGGTGGATGGGCCAAGGGAAGCCGC ]
[-] EMBL BX621983 [ CATCGGTCACCCCTGAGTAGATAGGCCC AGAAAGCGTACTTGGCGAACAGTACCACGGCAACGCA TCCCGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCGCTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTGTGTAGGCCACGAGCAGCTTGC GGTTCATTCAACCCGTTCGTTGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACTACCGCCGGCAGTTGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCACAATCTTGCCTGTGTCCTTTATGCTCGCCTCG A AGCGCTGCGCAATGTCCTCCTGCTTGGCCTTGTTGCCTGCCCCGTCGCCCGTTACCACGATACGCACCTCGTACGATTTGCTGAGCCACTTCAGCACGTTCTGGATCTTCGAGGCGAGATCGTGCTCGGCGATGCGGGCACTGATCGTCAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTTCGTTTAAATATTCCGAACCGGTCATCAGTCTGTACACCGGACGTTGCGTTTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCCG ]
[-] EMBL CNS08VN8 [ CCCCTGAGTAGATAGGCCC AGAAAGCGTACTTGGCGAACAGTACCACGGCAACGCA TCCCGTCACCTTTTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCGCTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTGTGTAGGCCACGAGCAGCTTGC GGTTCATTTTTTCCGTTCGTTGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACTACCGCCGGCAGTTGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCACAATCTTGCCCGTGTCCTTTATGCTCGCCTCG AGAGCG TGCGCAATGTCCTCCTACTTGGCCTTGTTGCCTGCCCCGTCGCCCAAAAACACGATACGCACCTCGTACGATTTGCTGAGCCACTTCAGCACGTTCTGGATCTTTGAGGCGAGATCGTGCTCGGCGATGCGGGCACTGATCGTCAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTCTGTACACTGGACGTTGCGTTTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCCGGCCTCATCTAAGTTTACAATCGAGATGGATCCGTCCGCAGCGATGAGCGTTACTTTTGGTGATGTTTTTGCCTTTTTGTTGTGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTTTCGATGTTTTCGTAGAATAAAATGGCACATTCCCTGGGGAAACCAATGCAGCACGGTTCCAGCTAGCAGGTGGATGGGCCAAGGGAAGCCGCCTTAGCTGTGGAACCACTAATCGGGTGATGAAATTCATTTTTTACTCGTTTTTTCGTCGTACAGAAAG ]
[+] EMBL CNS08V7X [ GCCCAAGAAAGCG ACTTGGCGAACAGTACCACGGCAACGCACTCCCGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCGCTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTGTGTAGGCCACGAGCAGCTTGC GGTTCATTCAACCCGTTCGTTGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACTACCGCCGGCAGTGGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCACAATCTTGCCCGTGTCCTTTATGCTCGCCTCG A AGCGCTGCGCAATGTCCTCCTGCTTGGCCTTGTTGCCTGCCCCGTCGCCCGTCACCACGATATGCACCTCGTACGATTTGCTGAGCCACTCCAGCACGTTCTGGATCTTTGAGGCGAGACCGTGC ]
[-] EMBL BX620912 [ GTACTTGGCGAACAGTACCACGGCAACGCA TCCNGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCGCTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTGTGTAGGCCACGAGCAGCTTGC GGTTCATTCAACCCGTTCGTTGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACTACCGCCGGCAGTTGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCACAATCTTGCCTGTGTCCTTTATGCTCGCCTCG A AGCGCTGCGCAATGTCCTCCTGCTTGGCCTTGTTGCCTGCCCCGTCGCCCGTTACCACGATACGCACCTCGTACGATTTGCTGAGCCACTTCAGCACGTTCTGGATCTTCGAGGCGAGATCGTGCTCGGCGATGCGGGCACTGATCGTCAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTTCGTTTAAATATTCCGAACCGGTCATCAGTCTGTACACCGGACGTTGCGTTTTCGTGT AAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCCGGCTTCATCTAAATTCACAATCGAGANGGATTCGTCCGCAGCGAT ]
[-] EMBL CNS08SEF [ CGAACAGTACCACGGCAACGCA TCCCGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCGCTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTGTGTAGGCCACGAGCAGCTTGC GGTAAATTCAACCCGTTCGTTTTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGAACTACCGCCGGCAGTTGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCACAATCTTGCCCGTGTCCTTTATGCTCGCCTCGAA AGCG TGCGCAATGTCCTCCTGCTTGGCCTTGTTGCCTGCCCCGTCGCCCGTTACCACGATATGCACCTCGTACGATTTGCTGAGCCACTTCAGCACGTTCTGGATCTTTGAGGCGAGATCGTGCTCGGCGATGCGGGCACTGATCGTCAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTCTGTACACTGGACGTTGCGTTTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCCGGCCTCATCTAAGTTTACAATCGAGATGGATTCGTCCGCAGCGATGAGCGTTACTTTTGGTGATGTTTTTGCCTTTTTGTTGTGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTTTCGATGTTTTCGTAGAATAAAATGGCACATTCCCTGGGGAAACCAATGCAGCACGGTTCCAGCTAGCAGGTGGATGGGCCAAGGGAAGCCGCCTTAGCTGTGGAACCACTAATCGGGTGATGAAATTCATTTTTTACTCGTTTTTTCGTCGTACAGAAAGAGAAGCGATGGA ]
[+] EMBL CNS08SEG [ TTGTCCCGCAGCCGTTTCTGCACAATCTTGCCCGTTTCCTTTATGCTCGCCTCG A AGCGCTGCGCAATGTCCTCCTGCTTGGCCTTGTTGCCTGCCCCGTCGCCCGTTACCACGATATGCACCTCGTACGATTTGCTGAGCCACTTCAGCACGTTCTGGATCTTTGAGGCGAGAACGTTCTCGGCGATGCGGGCACTGATCGTCAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTTTTTACACTGGACGTTGCGTTTTCGTGTAAAGGTCAGTTATCTTTACCAGCTTCAAATTGCGTTGATTCGCTATCTTTCCGGCCTCATCTAAGTTTACAATCGAGAAGGATTCGTCCGCAGCGATTTGCGTAACTTTTGGTGATGTTTTTGCCTTTTTGTTGTGGT ]
[-] EMBL CNS08V7W [ ATCTTGCCCGTGTCCTTTATGCTCGCCTCG A AGCG TGCGCAATGTCCTCCTGCTTGGCCTTGTTGCCTGCCCCGTCGCCCGTTACCACGATATGCACCTCGTACGATTTGCTGAGCCACTTCAGCACGTTCTGGATCTTTGAGGCGAGATCGTGCTCGGCGATGCGGGCACTGATCGTCAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTCTGTACACTGGACGTTGCGTTTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCCGGCCTCACCTAAGTTTACAATCGAGATGGATTCGTCCGCAGCGATGAGCGTTACTTTTGGTGATGTTTTTGCCTTTTTGTTGTGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTTTCGATGTTTTCGTAGAATAAAATGGCACATTCCCTGGGGAAACCAATGCAGCACGGTTCCAGCTAGCAGGTGGATGGGCCAAGGGAAGCCGCCTTAGCTGTGGAACCACTAATCGGGTGATGAAATTCATTTTTTACTCGTTTTTTCGTCGTACAGAAAGAGAAGCGATGGAGATTTTTCGTAGAT ]
[-] EMBL BX618714 [ g AGCGCTGCGCCATGTCCTCCTGCTTGGCCTTGTTGCCTGCCCCGTCGCCCGTTACCCCGGTACGCCCCTCGTACGATTTGCTGAGCCACTTCAGCACGTTCTGGTTCTTCGAGGCGAGTTCGTGCTCGGCGATGCGGGCACTGTTCGTCAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTACTCGCGGCGCTTTAGGTCTTCGTTTACATATTCCGAACCGGTCATCAGTCTGTACCCCGGACGTTGCGTTTTCGTGT ]
[-] EMBL BM612963 [ CAATGTCCTCCTGCTTGGCCTTGTTGCCTGCCCCGTCGCCCGTTACCACGATACGCACTTCGTACGATTTGCTGAGCCACTTCAGCACGTTCTGGATCTTCGAGGCGAGATCGTGCTCGGCGATGCGGGCACTGATCGTCAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTCTGTACACCGGACGTTGCGTTTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCCGGCCTCATCTAAATTCACAATCGAGATGGATTCGTCCGCAGCGATGAGCGTTACTTTTGGTGATGTTTTTGCCTTTTTGTTGTGGTTCGCAGCACCGGCAACTGCTGGCTCCTGGGGTTTCGATGTTTTCGTAGAATAAAATGGCACATTCCCTGGGGAAACCAATGCAGCACGGTTCCAGCTAGCAGGTGGATGGGCCAAGGGAAGCCGCCTTAGCTGTGGAACCACTAATCGGGTGATGAAATTCATTTTTTACTCGTTTTTTCGTCGTACAGAAAGAGAAGCGATGGAGATTTTTCGAAAGTGCGGACGCGTGGGCGG]
consensusID : consensus_9390#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 855 fasta sequence
[CGGGTCATCGGTCACCCCTGAGTAGATAGGCCCAGAAAGCGTACTTGGCGAACAGTACCACGGCAACGCATCCCGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCGCTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTGTGTAGGCCACGAGCAGCTTGCGGTTCATTCAACCCGTTCGTTGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACTACCGCCGGCAGTTGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCACAATCTTGCCCGTGTCCTTTATGCTCGCCTCGAAGCG-TGCGCAATGTCCTCCTGTTTGGCCTTGTTGCCTGCCCCGTCGTCAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTCTGTACACTGGACGTTGCGTTTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCCGGCCTCATCTATAGTTTACAATCGAGATGGATTCGTCCGCAGCGATGAGCGTTACTTTTGGTGATG-TTTTTGCC-TTTTTGTTG-TGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTTTCGATGTTTTCGTAGAATAAAATGGCACATTCCCTGGGGAAACCAATGCAGCACGGTTCCAGCTAGCAGGTGGATGGGCCAAGGGAAGCCGCCTTAGCTGTGGAACCACTAATCGGGTGATGAAATTCA-TTTTTTACTCGTTTTTTCGTCGTACAGAAAGAGAAGCGTTTGTTTT]
[-] EMBL CNS08OEC [CGGGTCATCGGTCACCCCTGAGTAGATAGGCCCAGAAAGCGTACTTGGCGAACAGTACCACGGCAACGCATCCCGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCGCTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTGTGTAGGCCACGAGCAGCTTGCGGTTCATTCAACCCGTTCGTTGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACTACCGCCGGCAGTTGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCACAATCTTGCCCGTGTCCTTTATGCTCGCCTCGAAGCG TGCGCAATGTCCTCCTGTTTGGCCTTGTTGCCTGCCCCGTCGTCAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTCTGTACACTGGACGTTGCGTTTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCCGGCCTCATCTATAGTTTACAATCGAGATGGATTCGTCCGCAGCGATGAGCGTTACTTTTGGTGATG TTTTTGCC TTTTTGTTG TGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTTTCGATGTTTTCGTAGAATAAAATGGCACATTCCCTGGGGAAACCAATGCAGCACGGTTCCAGCTAGCAGGTGGATGGGCCAAGGGAAGCCGCCTTAGCTGTGGAACCACTAATCGGGTGATGAAATTCA TTTTTTACTCGTTTTTTCGTCGTACAGAAAGAGAAGCGTTTGTTTT]
[+] EMBL CNS08OED [ TCCTTTCGCTGTTATTTTCACGCCGCCGAGCGGGCCTGAGTTTTTAGGCCACGAGCAGCTTGCGGTTCATTCAACCCGTTCGATGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACTCCCGCCGGCAGTGGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCACAATCTTGCCCGTTTCCTTTATGCTCGCCTCGAAGCGCTGCGCAATGTCCTCCTGTTTGGCCTTGTTGCCTGCCCCGTCGTCAGCAGCTTGTCGCCCTTAACCGAGGGGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTTTGTACACTGGACGTTGCGTTTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCCGGCCTCATCTA AGTTTACAATCGAGAGGGATTCGTCCGCAGCGATGAGCGTTACTTTTGGTGATG TTTTTGCC TTTTTGTTG TGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTTTCGATGTTTT ]
[-] EMBL CNS09MHB [ TGATGTTTTTTGCCTTTTTTGTTGTTGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTTTCGATGTTTTCGTAGAATAAAATGGCACATTCCCTGGGGAAACCAATGCAGCACGGTTCCAGCTAGCAGGTGGATGGGCCAAGGGAAGCCGCCTTAGCTGTGGAACCACTAATCGGGTGATGAAATTCATTTTTTTACTCGTTTTTTCGTCGTACAGAAAGAGAAGC ]
consensusID : consensus_9390#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 760 fasta sequence
[TCTAACCTTACTTTAAAAACCGTACAACCCGCTTGCCGGCCGGGTCATCGGTCACCCCTGATTAGATAGGCCCAGAAAGCGTACTTGGCGAACAGTACCACGGCAACGCATCCCGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCGCTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTTTTTAGGCCAC-GAGCAGCTTGCGGTT-CATTCAACCCGTTCGTTGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACTACCGCCGGCAGTTGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCACAATCTTGCCCGTGTCCTTTATGCTCGGCGATGCGGGCACTGATCGTCAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTCTGTACACTGGACGTTGCGTTTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCCGGCCTCATCTAAGTTTACAATCGAGATGGATTCGTCCGCAGCGATGAGCGTTACTTTTGGTGATGTTTTTGCCTTTTTGTTGTGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTTTCGATGTTTTCGTAGAATAAAATGGCACATTCCCTGGGGAAACCAATGCAGCACGGTTCCAGCTAGCAGGTGGA]
[+] EMBL CNS09MHC [TCTAACCTTACTTTAAAAACCGTACAACCCGCTTGCCGGCCGGGTCATCGGTCACCCCTGATTAGATAGGCCCAAAAAGCGTACTTGGCGAACAGTACCACGGCAACGCATCCCGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCGCTGTTATTTTCACGCCGCCGAGCGGGCCTGAATTTTTAGGCCACAGAGCAGCTTGCGGTTCCATTCAACCCGTTCGTTGTCT ]
[-] EMBL CNS09E3X [ CTTACTTTAAAAACCGTACAACCCGCTTGCCGGCCGGGTCATCGGTCACCCCTGAGTAGATAGGCCCAGAAAGCGTACTTGGCGAACAGTACCACGGCAACGCATCCCGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCGCTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTGTGTAGGCCAC GAGCAGCTTGCGGTT CATTCAACCCGTTCGTTGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACTACCGCCGGCAGTTGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCACAATCTTGCCCGTGTCCTTTATGCTCGGCGATGCGGGCACTGATCGTCAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTCTGTACACTGGACGTTGCGTTTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCCGGCCTCATCTAAGTTTACAATCGAGATGGATTCGTCCGCAGCGATGAGCGTTACTTTTGGTGATGTTTTTGCCTTTTTGTTGTGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTTTCGATGTTTTCGTAGAATAAAATGGCACATTCCCTGGGGAAACCAATGCAGCACGGTTCCAGCTAGCAGGTGGA]
[+] EMBL CNS09E3Y [ AGGCCCAGAAAGCGTACTTGGCGAACAGTACCACGGCAACGCATCCCGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCGCTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTTTTTAGGCCAC GAGCAGCTTGCGGTT CATTCAACCCGTTCGTTGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACTACCGCCGGCAGTGGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCACAATCTTGCCCGTGTCCTTTATGCTCGGCGATGCGGGCACTGATCGTCAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCGCTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTCTGTACACTGGACGTTGCGTTTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCCGGCCTCATCTAAGTTTACAATCGAGAGGGATTCGTCCGCAGCGATGAGCGTTACTTTTGGTGATGTTTTTGCCTTTTTGTTGTGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTTTCGATGTTTTCGTAGAAAAAAATGGC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9390#0 TATTTGAGCTAGCTTTATGTCTTACCTTACTTTAAAAACCGTACAACCCGCTTGCCGGCC 60
consensus_9390#2 -------------------TCTAACCTTACTTTAAAAACCGTACAACCCGCTTGCCGGCC 41
consensus_9390#1 -----------------------------------------------------------C 1
*
consensus_9390#0 GGGTCATCGGTCACCCCTGAGTAGATAGGCCCAGAAAGCGTACTTGGCGAACAGTACCAC 120
consensus_9390#2 GGGTCATCGGTCACCCCTGATTAGATAGGCCCAGAAAGCGTACTTGGCGAACAGTACCAC 101
consensus_9390#1 GGGTCATCGGTCACCCCTGAGTAGATAGGCCCAGAAAGCGTACTTGGCGAACAGTACCAC 61
******************** ***************************************
consensus_9390#0 GGCAACGCATCCCGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCG 180
consensus_9390#2 GGCAACGCATCCCGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCG 161
consensus_9390#1 GGCAACGCATCCCGTCACCGTGTACCGTTTCGTGACGGTTTGCGCTTCCCGATCCTTTCG 121
************************************************************
consensus_9390#0 CTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTGTGTAGGCCACGAGCAGCTTGCGGTTC 240
consensus_9390#2 CTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTTTTTAGGCCACGAGCAGCTTGCGGTTC 221
consensus_9390#1 CTGTGATTGTCACGCCGCCGAGCGGGCCTGAGTGTGTAGGCCACGAGCAGCTTGCGGTTC 181
********************************* * ************************
consensus_9390#0 ATTCAACCCGTTCGTTGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACT 300
consensus_9390#2 ATTCAACCCGTTCGTTGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACT 281
consensus_9390#1 ATTCAACCCGTTCGTTGTCTCCTTCGCATCCAGCAGGCCTTTTTTACCGCCCACGGCACT 241
************************************************************
consensus_9390#0 ACCGCCGGCAGTTGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCAC 360
consensus_9390#2 ACCGCCGGCAGTTGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCAC 341
consensus_9390#1 ACCGCCGGCAGTTGGCAGGATGTTAAACCGTAAGTCGTTGTCCCGCAGCCGTTTCTGCAC 301
************************************************************
consensus_9390#0 AATCTTGCCCGTGTCCTTTATGCTCGCCTCGAAGCGCTGCGCAATGTCCTCCTGCTTGGC 420
consensus_9390#2 AATCTTGCCCGTGTCCTTTATGCTCG---------------------------------- 367
consensus_9390#1 AATCTTGCCCGTGTCCTTTATGCTCGCCTCGAAGCGTGCGCAATGTCCTCCTGTTTGGCC 361
**************************
consensus_9390#0 CTTGTTGCCTGCCCCGTCGCCCGTTACCACGATACGCACCTCGTACGATTTGCTGAGCCA 480
consensus_9390#2 ------------------------------------------------------------
consensus_9390#1 ------------------------------------------------------------
consensus_9390#0 CTTCAGCACGTTCTGGATCTTTGAGGCGAGATCGTGCTCGGCGATGCGGGCACTGATCGT 540
consensus_9390#2 ----------------------------------------GCGATGCGGGCACTGATCGT 387
consensus_9390#1 ----------------------------------------TTGTTGCCTGCCCCG-TCGT 380
* *** ** * * ****
consensus_9390#0 CAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCG 600
consensus_9390#2 CAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCG 447
consensus_9390#1 CAGCAGCTTGTCGCCCTTAACCGAGGCGTCCTGTTTGGATTTCTTCTTTTCCTCGCGGCG 440
************************************************************
consensus_9390#0 CTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTCTGTACACTGGACGTTGCGT 660
consensus_9390#2 CTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTCTGTACACTGGACGTTGCGT 507
consensus_9390#1 CTTTAGGTCTTCGTTTAGGTATTCCGAACCGGTCATCAGTCTGTACACTGGACGTTGCGT 500
************************************************************
consensus_9390#0 TTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCC 720
consensus_9390#2 TTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCC 567
consensus_9390#1 TTTCGTGTCAAGGTCAGTAATCTTTACCAGCTTCAAATTGCGTCGATTCGCTATCTTTCC 560
************************************************************
consensus_9390#0 GGCCTCATCTA-AGTTTACAATCGAGATGGATTCGTCCGCAGCGATGAGCGTTACTTTTG 779
consensus_9390#2 GGCCTCATCTA-AGTTTACAATCGAGATGGATTCGTCCGCAGCGATGAGCGTTACTTTTG 626
consensus_9390#1 GGCCTCATCTATAGTTTACAATCGAGATGGATTCGTCCGCAGCGATGAGCGTTACTTTTG 620
*********** ************************************************
consensus_9390#0 GTGATGTTTTTGCCTTTTTGTTGTGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTT 839
consensus_9390#2 GTGATGTTTTTGCCTTTTTGTTGTGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTT 686
consensus_9390#1 GTGATGTTTTTGCCTTTTTGTTGTGGTTCGCAGCACCGGCAACTGCTGGGTTCTGGGGTT 680
************************************************************
consensus_9390#0 TCGATGTTTTCGTAGAATAAAATGGCACATTCCCTGGGGAAACCAATGCAGCACGGTTCC 899
consensus_9390#2 TCGATGTTTTCGTAGAATAAAATGGCACATTCCCTGGGGAAACCAATGCAGCACGGTTCC 746
consensus_9390#1 TCGATGTTTTCGTAGAATAAAATGGCACATTCCCTGGGGAAACCAATGCAGCACGGTTCC 740
************************************************************
consensus_9390#0 AGCTAGCAGGTGGATGGGCCAAGGGAAGCCGCCTTAGCTGTGGAACCACTAATCGGGTGA 959
consensus_9390#2 AGCTAGCAGGTGGA---------------------------------------------- 760
consensus_9390#1 AGCTAGCAGGTGGATGGGCCAAGGGAAGCCGCCTTAGCTGTGGAACCACTAATCGGGTGA 800
**************
consensus_9390#0 TGAAATTCATTTTTTACTCGTTTTTTCGTCGTACAGAAAGAGAAGCGATGGAGATTTTTC 1019
consensus_9390#2 ------------------------------------------------------------
consensus_9390#1 TGAAATTCATTTTTTACTCGTTTTTTCGTCGTACAGAAAGAGAAGCGTTTGTTTT----- 855
consensus_9390#0 GTAGATGCGGACGCGTGGGCGG 1041
consensus_9390#2 ----------------------
consensus_9390#1 ----------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||