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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9407#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1434 fasta sequence
[GAATCGGCNGAGGATAGTAAACCAATTTTATTATTCTTTCCTCTTCCGCTCACAGCTCAAGCTAGTTTCGTGTTATTTTGCGCAAAATAGCAATGGCTATATCAACAAGCGTACTTCGCACCCAACTGGTGGCGCTCACC-AACTCGTCTGGCATACACAAGG-AACAGGTGGACAAGTATCGGTCACTGTTGGACCAGATATTGCTCAACACCGGCAACGAGCTCGTCGACACCTTGAAGCTCTTCATCGAGGCGATCCTGAACGAACATGTCAGCTTGGTCATCTCGCGTCAGCTGCTGTCCGACG-TTAGCACCCACCTCACCAAGCTGCCCGACGATATCTCCAAATCGGTGGCACACTTCACACTGGACAAGGTGCAACCGA-GGGTGATTT-CG-TTCG-AGGAG-CAGGTCGCCTGCATTCG-GCAGCATTTGGCACAGATCTACGAACGCAATCAAAACTGGAAAGAGGCGGCAAACGTACTCG-GCGGTATCCCGCTGG-AAACTGGACAGAAACCTTATCCG-TTGGACTACAAACTCGAAACTTACCTGAAGATTGCACGTCTCTACCTGGAAGATGAGGATCC-GGTGCAGGCGGAAGCGTTCATCAA-CCGTGCCTCGAT-CCTGCAGGCCGATACGAAGGATGAGAAGCTACAGATTCTGTACAAGGTGTGCTACGCCCGTGTG-CTCGACTATCGTCGCAAGTTCATCGAAGCGGCCCAGCGATACAACGAGCTGTCCTACCGTACGATCGTGGACGAGGGTGAACGTATGACGGCACTGAAGAAAGCGCTCATCTGCACAGTACTGGCGTCGGCCGGTCAGCAGCGGTCGCGCATGCTGGCGACCCTATTC-AAGGACGAACGCTGCCAGCATCTG-CCGGCCTACTCGATCCTGGAGAAGATGTATCTCGATCGTATCATCCGTCGATCGGAGCTGCAAGAGTTCGAAGCGCTGCTGCAGATGCACCAGAAGGCGAGCACGCTCGATGGATCCTCCATACTGGATCGGG-CCGTGTTTGAGCACAACCTGCTATCGGCCAGCAAGCTGTACAACAACATAACGTTCGAGGAGCTGGGCGCATTGCTAGAGATTCCACCACCGAAAGCGGAACGTATCGCCAGCCAAATGATCACCGAGGGCCGCATGAATGGGTACATCGATCAGATCGACGGTGTGGTGCACTTTGAAACTCGGGAAGTACTGCCACAATGGGACAAGCAGATCCAGGGACTTTGCTACCAGCTGAACGGACTGATCGAGAAGATCGGTGCAGCGGAACCGGACTGGATGGCCAAAATCATGGA-GGAAGAAATGTGCACATGAATTGTTTCTCATCGGGACACAAGCACTCGGGGAAAAACATACGTCGTGGTGGATGAGATTGATAAAATTTAAAATATGCACGAAATAAATACTTTGTGATTTGATACACTTA]
[+] EMBL BX469535 [GAATCGGCNGAGGATAGTAAACCAATTTTATTATTCTTTCCTCTTCCGCTCACAGCTCAAGCTAGTTTCGTGTTATTTTGCGCAAAATAGCAATGGCTATATCAACAAGCGTACTTCGCACCCAGCTGGTGGCTCTCACCAAACTCGTCTGGCATACACAAGG AACAGGTGGACAAGTATCGGTCACTGTTGGACCAGATATTGCTCAACACCGGCAACGAGCTCGTCGACACCTTGAAGCTCTTCATCGAGGCGATCCTGAACGAACATGTCAGCTTGGTCATCTCGCGTCAGCTGCTGTCCGACG TTAGCACCCACCTCACCAAGCTGCCCGACGATATCTCCAAATCGGTGGCACACTTCACACTGGACAAGGTGCAACCGA GGGTGATTTACG TTCG AGGAGACAGGTCGCCTGCATTCG GCAGCATTTGGCACAGATCTACGAACGCAATCAAAACTGGAAGGAGGCGGCAAACGTACTCGCGCGGTATTCCGCTGG AAACTGGACAGAAACCTTATCCGTTTGGACTACAAACTCGAAACTTACCTGAAGATTGCACGTCTCTACCTGGAAGATGAGGATCCGGGTGCAGGCGGAAGCGTTCATCAAGCCGTGCCTCGATACCTGCAG ]
[+] EMBL CNS08X03 [ ATTTTATTATTCTTTCCTCTTCCGCTCACAGCTCAAGCTAGTTTCGTGTTATTTTGCGCAAAATAGCAATGGCTATATCAACAAGCGTACTTCGCACCCAGCTGGTGGCTCTCACC AACTCGTCTGGCATACACAAGG AACAGGTGGACAAGTATCGGTCACTGTTGGACCAGATATTGCTCAACACCGGCAACGAGCTCGTCGACACCTTGAAGCTCTTCATCGAGGCGATCCTGAACGAACATGTCAGCTTGGTCATCTCGCGTCA CTGCTGTCCGACG TTAGCACCCACCTCACCAAGCTGCCCGACGATATCTCCAAATCGGTGGCACACTTCACACTGGACAAGGTGCAACCGACGGGTGATTT CG TTCG AGGAG CAGGTCGCCTGCATTCG GCAGCATTTGGCACAGATCTACGAACGCAATCAAAACTGGAAGGAGACGGCAAACGTACTCG GCGGTATTCCGCTGG AAACTGGACAGAAACCTTATCCG TTGGACTACAAACTCGAAACTTACCTGAAGATTGCACGTCTCTACCTGGAAGATGAGGATCC GGTGCAGGCGGAAGCGTTCATCAA CCGTGCCTCGAT CCTGCAGGCCGATACGAAGGACGAGAAGCTACAGATTCTGTACAAGGTGTGCTACGCCCGTGTG CTCGACTATCGTCGCAAGTTCATCGAAGCGGCCCAGCGATACAACGAGCTGTCCTACCGTACGATCGTGGACGAGGGTGAACGTATGACGGCACTGAAGAAAGCGCTCATCTGCACAGTACTGGCGTCGGCCGGTCAGCAGCGGTCGCGCATGCTGGCGACCCTATTC AAGGACGAACGCTGCCAGCATCTG CCGGCCTACTCGATCCTGGAGAAGATGTATCTCGATCGTATC ]
[+] EMBL BM581983 [ ccgCTTTCCTCTTCCGCTCACAGCTCAAGCTAGTTTCGTGTTATTTTGCGCAAAATAGCAATGGCTATATCAACAAGCGTACTTCGCACCCAACTGGTGGCGCTCACC AACTCGTCTGGCATACACAAGG AACAGGTGGACAAGTATCGGTCACTGTTGGACCAGATATTGCTCAACACCGGCAACGAGCTCGTCGACACCTTGAAGCTCTTCATCGAGGCGATCCTGAACGAACATGTCAGCTTAGTCATCTCGCGTCAGCTGCTGTCCGACG TTAGCACCCACCTCACCAAGCTGCCCGACGATATCTCCAAATCGGTGGCACACTTCACACTGGACAAGGTGCAACCGA GGGTGATTT CG TTCG AGGAG CAGGTCGCCTGCATTCG GCAGCATTTGGCACAGATCTACGAACGCAATCAAAACTGGAAAGAGGCGGCAAACGTACTCG GCGGTATCCCGCTGG AAACTGGACAGAAACCTTATCCG TTGGACTACAAACTCGAAACTTACCTGAAGATTGCACGTCTCTACCTGGAAGATGAGGATCC GGTGCAGGCGGAAGCGTTCATCAA CCGTGCCTCGAT CCTGCAGGCCGATACGAAGGATGAGAAGCTACAGATTCTGTACAAGGTGTGCTACGCCCGTGTG CTCGACTATCGTCGCAAGTTCATCGAAGCGGCCCAGCGATACAACGAGCTGTCCT ]
[+] EMBL CNS09QDD [ TTCCGCTCACAGCTCAAGCTAGTTTCGTGTTATTTTGCGCAAAATAGCAATGGCTATATCAACAAGCGTACTTCGCACCCAACTGGTGGCGCTCACC AACTCGTCTGGCATACACAAGG AACAGGTGGACAAGTATCGGTCACTGTTGGACCAGATATTGCTCAACACCGGCAACGAGCTCGTCGACACCTTGAAGCTCTTCATCGAGGCGATCCTGAACGAACATGTCAGCTTGGTCATCTCGCGTCA CTGCTGTCCGACGTTTAGCACCCACCTCACCAAGCTGCCCGACGATATCTCCAAATCGGTGGCACACTTCACACTGGACAAGGTGCAACCGAGGGGTGATTT CGCTTCA AGGAG CAGGTCGCCTGCATTCGCGCAGCATTTGGCACAGATCTACGAACGCAATCAAAATTGGAAAGAGGCGGCAAACGTACTCG GCGGTATCCCGCTGG AAACTGGACAGAAACCTTATCCG TTGGACTACAAACTCGAAACTTACCTGAAGATTGCACGTCTCTACCTGGAAGATGAGGATCC GGTGCAGGCGGAAGCGTTCATCAA CCGTGCCTCGAT CCTGCAGGCCGATACGAAGGATGAGAAGCTACAGATTCTGTACAAGGTGTGCTACGCCCGTGTG CTCGACTATCGTCGCAAGTTCATCGAAGCGGCCCAGCGATACAACGAGCTG ]
[+] EMBL BM575746 [ ccgCACAGCTCAAGCTAGTTTCGTGTTATTTTGCGCAAAATAGCAATGGCTATATCAACAAGCGTACTTCGCACCCAACTGGTGGCGCTCACC AACTCGTCTGGCATACACAAGG AACAGGTGGACAAGTATCGGTCACTGTTGGACCAGATATTGCTCAACACCGGCAACGAGCTCGTCGACACCTTGAAGCTCTTCATCGAGGCGATCCTGAACGAACATGTCAGCTTAGTCATCTCGCGTCAGCTGCTGTCCGACG TTAGCACCCACCTCACCAAGCTGCCCGACGATATCTCCAAATCGGTGGCACACTTCACACTGGACAAGGTGCAACCGA GGGTGATTT CG TTCG AGGAG CAGGTCGCCTGCATTCG GCAGCATTTGGCACAGATCTACGAACGCAATCAAAACTGGAAAGAGGCGGCAAACGTACTCG GCGGTATCCCGCTGG AAACTGGACAGAAACCTTATCCG TTGGACTACAAACTCGAAACTTACCTGAAGATTGCACGTCTCTACCTGGAAGATGAGGATCC GGTGCAGGCGGAAGCGTTCATCAA CCGTGCCTCGAT CCTGCAGGCCGATACGAAGGATGAGAAGCTACAGATTCTGTACAAGGTGTGCTACGCCCGTGTG CTCGACTATCGTCGCAAGTTCATCGAAGCGGCCCAGCGATACAACGAGCTGTC ]
[+] EMBL CNS08P45 [ TTTGCGCAAAATAGCAATGGCTATATCAACAAGCGTACTTCGCACCCAACTGGTGGCGCTCACC AACTCGTCTGGCCTACACAAGG AACAGGTGGACAAGTATCGGTCACTGTTGGACCAGATATTGCTCAACACCGGCAACGAGCTCGTCGACACCTTGAAGCTCTTCATCGAGGCGATCCTGAACGAACATGTCAGCTTGGTCATCTCGCGTCAG TGCTGTCCGACG TTAGCACCCACCTCACCAAGCTGCCCGACGATATCTCCAAATCGGTGGCACACTTCACACTGGACAAGGTGCAACCGAGGGGTGATTT CG TTCG AGGAG CAGGTCGCCTGCATTCG GCAGCATTTGGCACAGATCTACGAACGCAATCAAAACTGGAAAGAGGCGGCAAACGTACTCG GCGGTATCCCGCTGG AAACTGGACAGAAACCTTATCCG TTGGACTACAAACTCGAAACTTACCTGAAGATTGCACGTCTCTACCTGGAAGATGAGGATCC GGTGCAGGCGGAATTTTTTTTTTT CCGTGCCTCGAT CCTGCAGGCCGATACGAAGGATGAGAAGCTACAGATTCTGTACAAGGTGTGCTACGCCCGTGTG CTCGACTATCGTCGCAAGTTCATCGAAGCGGCCCAGCGATACAACGAGCTGTCCTACCGTACGATCGTGGACGAGGGTGAACGTATGACGGCACTGAAGAAAGCGCTCATCTGCACGGTACTGGCGTCGGCCGGTCAGCAGCGGTCGCGCATGCTGGCGACCCTATTC AAGGACGAACGCTGCCAGCATCTG CCGGCCTACTCGATCCTGGAGAAGATGTACCTCGATCGTTTTTTCCGTCGATCGGAGCTGCAAGAGTTCGAAGCGCTGCTGCAGATGCACCAGAAGGCGAGCACGCTCGATGGATCCTCCATACTGGATCGGG CCGTGTTTGAGCACAACCTGCTATCGGCCAGCAAGCTGTACAACAACATAACGTTCGAG ]
[+] EMBL BX611772 [ TATATCAACAAGCGTACTTCGCACCCAGCTGGTGGCTCTCACC AACTCGTCTGGCATACACAAGG AACAGGTGGACAAGTATCGGTCACTGTTGGACCAGATATTGCTCAACACCGGCAACGAGCTCGTCGACACCTTGAAGCTCTTCATCGAGGCGATCCTGAACGAACATGTCAGCTTGGTCATCTCGCGTCAGCTGCTGTCCGACG TTAGCACCCACCTCACCAAGCTGCCCGACGATATCTCCAAATCGGTGGCACACTTCACACTGGACAAGGTGCAACCGA GGGTGATTT CG TTCG AGGAG CAGGTCGCCTGCATTCG GCAGCATTTGGCACAGATCTACGAACGCAATCAAAACTGGAAGGAGGCGGCAAACGTACTCG GCGGTATTCCGCTGG AAACTGGACAGAAACCTTATCCG TTGGACTACAAACTCGAAACTTACCTGAAGATTGCACGTCTCTACCTGGAAGATGAGGATCC GGTGCAGGCGGAAGCGTTCATCAA CCGTGCCTCGAT CCTGCAGGCCGATACGAAGGACGAGAAGCTACAGATTCTGTACAAGGTGTGCTACGCCCGTGTG CTCGACTATCGTCGCAAGTTCATCGAAGCGGCCCAGCGATACAACGAGCTGTCCTACCGTACGATCGTGGACGAGGGTGAACGTATGACGGCACTGAAGAAAGCGCTCATCTGCACAGTACT ]
[+] EMBL BM612179 [ CTGGTGGCGCTCACC AACTCGTCTGGCATACACAAGGCAACAGGTGGACAAGTATCGGTCACTGTTGGACCAGATATTGCTCAACACCGGCAACGAGCTCGTCGACACCTTGAAGCTCTTCATCGAGGCGATCCTGAACGAACATGTCAGCTTAGTCATCTCGCGTCAGCTGCTGTCCGACG TTAGCACCCACCTCACCAAGCTGCCCGACGATATCTCCAAATCGGTGGCAC ]
[-] EMBL CNS09QDE [ ACCCACCTCACCAAGCTGCCCGACGATATCTCCAAATCGGTGGCACACTTCACACTGGACAAGGTGCAACCGA GGGTGATTT CG TTCA AGGAG CAGGTCGCCTGCATTCG GCAGCATTTGGCACAGATCTACGAACGCAATCAAAATTGGAAAGAGGCGGCAAACGTACTCG GCGGTATCCCGCTGGAAAACTGGACAGAAACCTTATCCG TTGGACTACAAACTCGAAACTTACCTGAAGATTGCACGTCTCTACCTGGAAGATGAGGATCC GGTGCAGGCGGAAGCGTTCATCAA CCGTGCCTCGAT CCTGCAGGCCGATACGAAGGATGAGAAGCTACAGATTCTGTACAAGGTGTG TACGCCCGTGTG CTC ACTATCGTCGCAAGTTCATCGAAGCGGCCCAGCGATACAACGAGCTGTCCTACCGTACGATCGTGGACGAGGGTGAACGTATGACGGCACTGAAGAAAGCGCTCATCTGCACGGTACTGGCGTCGGCCGGTCAGCAGCGGTCGCGCATGCTGGCGACCCTATTC AAGGACGAACGCTGCCAGCATCTGCCCGGCCTACTCGATCCTGGAGAAGATGTACCTCGATCGTATCATCCGTCGATCGGAGCTGCAAGAGTTCGAAGCGCTGCTGCAGATGCACCAGAAGGCGAGCACGCTCGATGGATCCTCCATACTGGATCGGGCCCGTGTTTGAGCACAACCTGCTATCGGCCAGCAAGCTGTACAACAACATAACGTTCGAGGAGCTGGGCGCATTGCTAGAGATTCCACCACCGAAAGCGGAACGTATCGCCAGCCAA ]
[+] EMBL CNS09DO1 [ CAAGCTGCCCGACGATATCTCCAAATCGGTGGCACACTTCACACTGGACAAGGTGCAACGAA GGGTGATTT CG TTCGAAGGAG CAGGTCGCCTGCATTCG GCAGCATTTGGCACAGATCTACGAACGCAATCAAAACTGGAAGGAGGCGGCAAACGTACTCG GCGGTATTCCGCTGG AAACTGGACAGAAACCTTATCCG TTGGACTACAAACTCGAAACTTACCTGAAGATTGCACGTCTCTACCTGGAAGATGAGGATCC GGTGCAGGCGGAAGCGTTCATCAA CCGTGCCTCGAT CCTGCAGGCCGA ]
[+] EMBL BM641942 [ ccgGTCTCTACCTGGAAGATGAGGATCC GGTGCAGGCGGAAGCGTTCATCAA CCGTGCCTCGAT CCTGCAGGCCGATACGAAGGATGAGAAGCTACAGATTCTGTACAAGGTGTGCTACGCCCGTGTG CTCGACTATCGTCGCAAGTTCATCGAAGCGGCCCAGCGATACAACGAGCTGTCCTACCGTACGATCGTGGACGAGGGTGAACGTATGACGGCACTGAAGAAAGCGCTCATCTGCACGGTACTGGCGTCGGCCGGTCAGCAGCGGTCGCGCATGCTGGCGACCCTATTC AAGGACGAACGCTGCCAGCATCTG CCGGCCTACTCGATTCTGGAGAAGATGTATCTCGATCGTATCATCCGTCGATCGGAGCTGCAAGAGTTCGAAGCGCTGCTGCAGATGCACCAGAAGGCGAGCACGCTCGATGGATCCTCCATACTGGATCGGG CCGTGTTTGAGCACAATCTGCTGTCGGCCAGCAAGCTGTACAACAACATAACGTTCGAGGAGCTGGGCGCATTGCTAGAGATTCCACCACCGAAAGCGGAACGTATCGCCAGCCAAATGATCACCGAGGGCCGCATGAATGGGTACATCGATCAGATCGACGGTGTGGTGCACTTTGAAACTCGGGAAGTACTGCCACAATGGGACAAG ]
[-] EMBL CNS08X04 [ GTTCATCAA CCGTGCCTCGAT CCTGCAGGCCGATACGAAGGACGAGAAGCTACAGATTCTGTACAAGGTGTG TACGCCCGTGTGCCTC ACTATCGTCGCAAGTTCATCGAAGCGGCCCAGCGATACAACGAGCTGTCCTACCGTACGATCGTGGACGAGGGTGAACGTATGACGGCACTGAAGAAAGCGCTCATCTGCACAGAACTGGCGTCGGCCGGTCAGCAGCGGTCGCGCATGCTGGCGACCCTATTC AAGGACGAACGCTGCCAGCATCTG CCGGCCTACTCGATCCTGGAGAAGATGTTTCTCGATCGTTTCATCCGTCGATCGGAGCTGCAAGAGTTCGAAGCGCTGCTGCAGATGCACCAGAAGGCGAGAACGCTCGGTGGATCCTCCATACTGGATCGGG CCGTGTTTGAGCACAACCTGCTATCGGCCAGCAAGCTGTACAACAAAATAACGTTCGAGGAGCTGGGCGCATTGCTAGAGATTCCACCACCGAAAGCGGAACGTATCGCCAGCCAAATGATCACTGAGGGCCGCATGAATGGGTACATCGATCAGATCGACGGTGTGGTGCACTTTGAAACTCGGGAAGTACTGCCACAATGGGACAAGCAGATCCAGGGACTTTGCTACCAGCTGAACGGACTGATCGAGAAGATCGGTGCAACGGAACCGGACTGGATGGCCAAAATCATGGA GGAAGAAATGTGCACATGAATTGTTTCTCATCGGGACACAAGCACTCGGGGAAAAACATACGTCGTGGTGGATGAGATTGATAAAATTTAAAATATGCACGAAATAAATACTTTGTGATTTGATACACTTA]
[-] EMBL BX611771 [ G CTCGACTATCGTCGCAAGTTCATCGAAGCGGCCCAGCGATACAACGAGCTGTCCTACCGTACGATCGTGGACGAGGGTGAACGTATGACGGCACTGAAGAAAGCGCTCATCTGCACAGTACTGGCGTCGGCCGGTCAGCAGCGGTCGCGCATGCTGGCGACCCTATTCAAAGGACGAACGCTGCCAGCATCTG CCGGCCTACTCGATCCTGGAGAAGATGTATCTCGATCGTATCATCCGTCGATCGGAGCTGCAAGAGCTCGAAGCGCTGCTGCAGATGCACCAGAAGGCGAGCACGCTCGATGGATCCTCCATACTGGATCGGG CCGTGTTTGAGCACAACCTGCTATCGGCCAGCAAGCTGTACAACAACATAACGTTCGAGGAGCTGGGCGCATTGCTAGAGATTCCACCACCGAAAGCGGAACGTATCGCCAGCCAAATGATCACTGAGGGCCGCATGAATGGGTACATCGATCAGATCGACGGTGTGGTGCACTTTGAAACTCGGGAAGTACTGCCACAATGGGACAAGCAGATCCAGGGACTTTGCTACCAGCTGAACGGACTGATCGAGAAGATCGGTGCAGCGGAACCGGACTGGATGGCCAAAATCATGGAGGGAAGAAATGTGCACATGAATTGTTTCTCATCG ]
[-] EMBL CNS08P46 [ GTACCTCGATCGTATCATCCGTCGATCGGAGCTGCAAGAGTTCGAAGCGCTGCTGCAGATGCACCAGAAGGCGAGCACGCTCGATGGATCCTCCATACTGGATCGGG CCGTGTTTGAGCACAACCTGCTATCGGCCAGCAAGCTGTACAACAAAATAACGTTCGAGGAGCTGGGCGCATTGCTAGAGATTCCACCACCGAAAGCGGAACGTATCGCCAGCCAAATGATCACCGAGGGCCGCATGAATGGGTACATCGATCAAATCGACGGTGTGGTGCACTTTGAAACTCGGGAAGTACTGCCACAATGGGACAAGCAGATCCAGGGACTTTGCTACCAGCTGAACGGACTGATCGAGAAGATCGGTGCAGCGGAACCGGA ]
consensusID : consensus_9407#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 614 fasta sequence
[ATCGCCAGAGGTTATAGTTTCGTGTTATTTTGCGCAAAATAGCAATGGCTATATCAACAAGCGTACTTCGCACCCAGCTGGTGGCTCTCACCAACTCGTCTGGCATACACAAGGAACAGGTGGACAAGTATCGGTCACTGTTGGACCAGATATTGCTCAACACCGGCAACGAGCTCGTCGACACCTTGAAGCTCTTCATCGAGGCGATCCTGAACGAACATGTCAGCTTGGTCATCTCGCGTCAGCTGCTGTCCGACGTTAGCACCCACTCACCAAGCTGGCCGACGATATCTCCAAATCGGTGGCACACTTCACACTGGACAAGGTGCAACCGAGGGTGATTTCGTTCGAGGAGCAGGTCGCCTGCATTCGGCAGGCCATTTGGCACAGATCTACGAACGCAATCAAAACTGGAANGAGCGCGGCAAACGTACTCGCGCGGTATTCCGCTGGAAACTGGACAGAAACCTTATCCGTTGGACTACAAACTCGAAAACTTACCTGAACNNATTNGCACGTCTCTACCTGGANAGACTGAGGATCCCGGTTGCAGGCGGGAAGCGTTCATCAACCGTGCCTCGATCCTGCAGGCCGCAATACNACCAGCGACGAGA]
[+] EMBL AL696194 [ATCGCCAGAGGTTATAGTTTCGTGTTATTTTGCGCAAAATAGCAATGGCTATATCAACAAGCGTACTTCGCACCCAGCTGGTGGCTCTCACCAACTCGTCTGGCATACACAAGGAACAGGTGGACAAGTATCGGTCACTGTTGGACCAGATATTGCTCAACACCGGCAACGAGCTCGTCGACACCTTGAAGCTCTTCATCGAGGCGATCCTGAACGAACATGTCAGCTTGGTCATCTCGCGTCAGCTGCTGTCCGACGTTAGCACCCACTCACCAAGCTGGCCGACGATATCTCCAAATCGGTGGCACACTTCACACTGGACAAGGTGCAACCGAGGGTGATTTCGTTCGAGGAGCAGGTCGCCTGCATTCGGCAGGCCATTTGGCACAGATCTACGAACGCAATCAAAACTGGAANGAGCGCGGCAAACGTACTCGCGCGGTATTCCGCTGGAAACTGGACAGAAACCTTATCCGTTGGACTACAAACTCGAAAACTTACCTGAACNNATTNGCACGTCTCTACCTGGANAGACTGAGGATCCCGGTTGCAGGCGGGAAGCGTTCATCAACCGTGCCTCGATCCTGCAGGCCGCAATACNACCAGCGACGAGA]
consensusID : consensus_9407#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 388 fasta sequence
[CCGCGGACGCGTGGGCGGACGCGTGGGGGCGCATTGCTAGAGATTCCACCACCGAAAGCGGAACGTATCGCCAGCCAAATGATCACCGAGGGCCGCATGAATGGGTACATCGATCAGATCGACGGTGTGGTGCACTTTGAAACTCGGGAAGTACTGCCACAGTGGGACAAGCAGATCCAGGGACTGTGCTACCAGCTGAACGGACTGATCGAGAAGATCGGTGCAGCGGAACCGGACTGGATGGCCAAAATCATGGAGGAAGAAATGTGCACATGAATTGTTTCTCATCGAGACACAAGCACTTCGGCACACACTTACGTCGTGGTGGATGAGATTGATAAAATTTAAAATATGCACGAAATAAATACTTTGTGATTTGATACACTTG]
[+] EMBL BM600728 [CCGCGGACGCGTGGGCGGACGCGTGGGGGCGCATTGCTAGAGATTCCACCACCGAAAGCGGAACGTATCGCCAGCCAAATGATCACCGAGGGCCGCATGAATGGGTACATCGATCAGATCGACGGTGTGGTGCACTTTGAAACTCGGGAAGTACTGCCACAGTGGGACAAGCAGATCCAGGGACTGTGCTACCAGCTGAACGGACTGATCGAGAAGATCGGTGCAGCGGAACCGGACTGGATGGCCAAAATCATGGAGGAAGAAATGTGCACATGAATTGTTTCTCATCGAGACACAAGCACTTCGGCACACACTTACGTCGTGGTGGATGAGATTGATAAAATTTAAAATATGCACGAAATAAATACTTTGTGATTTGATACACTTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9407#0 GAATCGGCNGAGGATAGTAAACCAATTTTATTATTCTTTCCTCTTCCGCTCACAGCTCAA 60
consensus_9407#1 --------------------------------------------ATCGC-CAGAGGTTA- 14
consensus_9407#2 ------------------------------------------------------------
consensus_9407#0 GCTAGTTTCGTGTTATTTTGCGCAAAATAGCAATGGCTATATCAACAAGCGTACTTCG-C 119
consensus_9407#1 --TAGTTTCGTGTTATTTTGCGCAAAATAGCAATGGCTATATCAACAAGCGTACTTCG-C 71
consensus_9407#2 ------------------------------CCGCGGACGCGTGGGCGGACGCGTGGGGGC 30
* ** * * ** * *
consensus_9407#0 ACCCAACTGGTGGCGCTCACCAACTCGTCTGGCATACACAAGGAACAGGTGGACAAGTAT 179
consensus_9407#1 ACCCAGCTGGTGGCTCTCACCAACTCGTCTGGCATACACAAGGAACAGGTGGACAAGTAT 131
consensus_9407#2 GCATTGCTAGAGATTC-CACCACCGAAAGCGGAACGTATCG---CCAGCCAAATGATCAC 86
* ** * * * ***** * ** * * *** * * *
consensus_9407#0 CGGTCACTGTTGGACCAGATATTGCTCAACACCGGCAACGAGCTCGTCGACACCTTGAAG 239
consensus_9407#1 CGGTCACTGTTGGACCAGATATTGCTCAACACCGGCAACGAGCTCGTCGACACCTTGAAG 191
consensus_9407#2 CGAGGGCCGCATGAATGGGTAC--ATCGATCAGATCGACGGTGTGGT--GCACTTTGAAA 142
** * * ** * ** ** * * *** * ** *** *****
consensus_9407#0 CTCTTCATCGAGGCGATCCTGAACGAACATGTCAGCTTGGTCATCTCGCGTCAGCTGCTG 299
consensus_9407#1 CTCTTCATCGAGGCGATCCTGAACGAACATGTCAGCTTGGTCATCTCGCGTCAGCTGCTG 251
consensus_9407#2 CTC-------GGGAAGTACTGCCACAGTGGGACAAGCAG---ATCCAGGGACTG-TGCTA 191
*** ** * *** * * ** * *** * * * * ****
consensus_9407#0 TCCGACGTTAGCACCCACCTCACCAAGCTGCCCGACGATATCTCCAAATCGGTGGCACAC 359
consensus_9407#1 TCCGACGTTAGCACCCAC-TCACCAAGCTGGCCGACGATATCTCCAAATCGGTGGCACAC 310
consensus_9407#2 CCAGCTGAACGGACTGAT--CGAGAAGATCGGTGCAGCGGAACCGGACTGGATGGCCAAA 249
* * * * ** * * *** * * * * * * * **** *
consensus_9407#0 TTCACACTGGACAAGGTGCAACCGAGGGTGATTTCGT-TCGAGGAGCAGGTCGCCTGCAT 418
consensus_9407#1 TTCACACTGGACAAGGTGCAACCGAGGGTGATTTCGT-TCGAGGAGCAGGTCGCCTGCAT 369
consensus_9407#2 ATCATGGAGGAAGAAATGTGCACATGAATTGTTTCTCATCGAGACACAAG-CAC-----T 303
*** *** * ** * * * **** ***** ** * * * *
consensus_9407#0 TCGGCAG--CATTTGGCACAGATCTACGAACGCAATCAAAACTGGAAAGAG-GCGGCAAA 475
consensus_9407#1 TCGGCAGGCCATTTGGCACAGATCTACGAACGCAATCAAAACTGGAANGAGCGCGGCAAA 429
consensus_9407#2 TCGGCACACACTTACGTCGTGGTGGATGAGATTGATAAAATTTAAAATATGCACGAAATA 363
****** ** * * * * ** ** *** * ** * ** * *
consensus_9407#0 CGTACTC-G-GCGGTATCCCGCTGGAAACTGGACAGAAACCTTATCCGTTGGACTACAAA 533
consensus_9407#1 CGTACTC-GCGCGGTATTCCGCTGGAAACTGGACAGAAACCTTATCCGTTGGACTACAAA 488
consensus_9407#2 AATACTTTGTGATTTGATACACTTG----------------------------------- 388
**** * * * * ** *
consensus_9407#0 CTCGAAA-CTTACCTGAAGAT---TGCACGTCTCTACCTGGAAGA--TGAGGATCCGG-- 585
consensus_9407#1 CTCGAAAACTTACCTGAACNNATTNGCACGTCTCTACCTGGANAGACTGAGGATCCCGGT 548
consensus_9407#2 ------------------------------------------------------------
consensus_9407#0 TGCAGGCGG-AAGCGTTCATCAACCGTGCCTCGATCCTGCAGGCCG--ATACGAAGGATG 642
consensus_9407#1 TGCAGGCGGGAAGCGTTCATCAACCGTGCCTCGATCCTGCAGGCCGCAATACNACCAGCG 608
consensus_9407#2 ------------------------------------------------------------
consensus_9407#0 AGAAGCTACAGATTCTGTACAAGGTGTGCTACGCCCGTGTGCTCGACTATCGTCGCAAGT 702
consensus_9407#1 ACGAGA------------------------------------------------------ 614
consensus_9407#2 ------------------------------------------------------------
consensus_9407#0 TCATCGAAGCGGCCCAGCGATACAACGAGCTGTCCTACCGTACGATCGTGGACGAGGGTG 762
consensus_9407#1 ------------------------------------------------------------
consensus_9407#2 ------------------------------------------------------------
consensus_9407#0 AACGTATGACGGCACTGAAGAAAGCGCTCATCTGCACAGTACTGGCGTCGGCCGGTCAGC 822
consensus_9407#1 ------------------------------------------------------------
consensus_9407#2 ------------------------------------------------------------
consensus_9407#0 AGCGGTCGCGCATGCTGGCGACCCTATTCAAGGACGAACGCTGCCAGCATCTGCCGGCCT 882
consensus_9407#1 ------------------------------------------------------------
consensus_9407#2 ------------------------------------------------------------
consensus_9407#0 ACTCGATCCTGGAGAAGATGTATCTCGATCGTATCATCCGTCGATCGGAGCTGCAAGAGT 942
consensus_9407#1 ------------------------------------------------------------
consensus_9407#2 ------------------------------------------------------------
consensus_9407#0 TCGAAGCGCTGCTGCAGATGCACCAGAAGGCGAGCACGCTCGATGGATCCTCCATACTGG 1002
consensus_9407#1 ------------------------------------------------------------
consensus_9407#2 ------------------------------------------------------------
consensus_9407#0 ATCGGGCCGTGTTTGAGCACAACCTGCTATCGGCCAGCAAGCTGTACAACAACATAACGT 1062
consensus_9407#1 ------------------------------------------------------------
consensus_9407#2 ------------------------------------------------------------
consensus_9407#0 TCGAGGAGCTGGGCGCATTGCTAGAGATTCCACCACCGAAAGCGGAACGTATCGCCAGCC 1122
consensus_9407#1 ------------------------------------------------------------
consensus_9407#2 ------------------------------------------------------------
consensus_9407#0 AAATGATCACCGAGGGCCGCATGAATGGGTACATCGATCAGATCGACGGTGTGGTGCACT 1182
consensus_9407#1 ------------------------------------------------------------
consensus_9407#2 ------------------------------------------------------------
consensus_9407#0 TTGAAACTCGGGAAGTACTGCCACAATGGGACAAGCAGATCCAGGGACTTTGCTACCAGC 1242
consensus_9407#1 ------------------------------------------------------------
consensus_9407#2 ------------------------------------------------------------
consensus_9407#0 TGAACGGACTGATCGAGAAGATCGGTGCAGCGGAACCGGACTGGATGGCCAAAATCATGG 1302
consensus_9407#1 ------------------------------------------------------------
consensus_9407#2 ------------------------------------------------------------
consensus_9407#0 AGGAAGAAATGTGCACATGAATTGTTTCTCATCGGGACACAAGCACTCGGGGAAAAACAT 1362
consensus_9407#1 ------------------------------------------------------------
consensus_9407#2 ------------------------------------------------------------
consensus_9407#0 ACGTCGTGGTGGATGAGATTGATAAAATTTAAAATATGCACGAAATAAATACTTTGTGAT 1422
consensus_9407#1 ------------------------------------------------------------
consensus_9407#2 ------------------------------------------------------------
consensus_9407#0 TTGATACACTTA 1434
consensus_9407#1 ------------
consensus_9407#2 ------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||