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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9412#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1314 fasta sequence
[CCGCGGACGCGTCCGCGGACGCGTCGGCACTGGTCGAGTTCGGCACGGCAGCACTAGCAGCAGCAGTAGTAGCAGCATCCCGGAAGTTATCACTAGCGGTCCTACAGCAGCATCCTGACACGATCGCTGATCGCTGGGCAATAGAGAGATCCTGCAAGAGGCAACTGCTACCGACGCGTGCACTACTACTCCACACCTGCGACAGTTTCGACAGCAAAATGCTGAACGGTGCAAAGATCCTTTCCGGCACGGATGTGGCCAAAGAAATTCGCGAACGGCTGAAGAAGGAGGTGGCCGAAATCCGACGCCAGGTACCGACGCTTGTGCCCGGGCTCGCGATCGTTCAGGTCGGTGGGCGCGAAGACTCGAACGTGTACATCCGGATGAAGATCAAGGCGGCGGAAGAGATCGGCATGTACGCCGAGCACGTGCAGCTGCCCCGTTCCACTACGCAGGATGAGCTGTTGGCAACGGTCAAACGACTTAACGAGGATCCTTGCTTCCATGGCATTATCGTGCAGATGCCACTCGACTCGGAAACGCCGATCGATGCACATCTCATTACCGATGCCGTCTCGCCGGAAAAGGACGTTGATGGCCTGAACACGATCAACGAGGGACGCGTCGCAACGGGCGACATGTCCGGCTTTTTGCCCTGCACGCCGAACGGTTGCATGGAGCTGATCAAGCGCACC-GGCACACCGATCGCCGGCTCGTACGCCGTTGTGATCGGGCGCAGCAAGATCGTCGGTACGCCGATGTCGGAGCTGCTCAAGTGGGCCGATGCCACCGTCACGGTGGCCCACTCGAAGACGAAGAACCTCAACTTGCTGATTAAGAAGGCGGACATTCTGGTGGTTGCCGTCGGGCGTCCGGAGATGGTACGGGGCGCCTGGATAAAGCCCGGTGCCGTCGTCATCGACTGTGGCATCAACTCCATCCCGGACCCGAACG-AGAAGAGTGGCCAGCGGTTGGTGGGAGACGTAAAGTACGAGGAGGCACTCCCCGTTGCGTCGCACGTTACGCCGGTACCTGGAGGCGTCGGGCCGATGACGGTGGCGATGCTGATGCAGAACACCGTTCAGTCTGCCCAGAGAGTTGCCCGGAGATTGATCGAGATGGAGTTCCGCTGGTGCCTGAAGCCGCTGCCACTGAAGCTTACCGAACCGGTTCCGAGTGACATCGAGATCGCTCGTGCCCAGGAGCCGAGGGATGTGGCGGTGCTGGCGCAGGAGATTGGGCTAATACCCGTCGGACGGTTTCGCTGTACGGCACCAAGAAGGCGAACGTATCGCTGAAGGTGCTGCAGCGGCT]
[+] EMBL BM612763 [CCGCGGACGCGTGGGCGGACGCGTGGGCACTGGTCGAGTTCGGCACGGCAGCACTAGCAGCAGCAGCAGTAGCAGCATCCTGGAAGTTATCACTAGCGGTCCTACAGCAGCATCCTGACGCGATCGCTGATCGCTGGGCAATAGAGAGATCCTGCAAGAGGCAACTGCTACCGACGCGTGCACTACTACTCCACACCTGCGACAGTTTCGACAGCAAAATGCTGAACGGTGCAAAGATCCTTTCCGGCACGGATGTGGCCAAAGAAATTCGCGAACGGCTGAAGAAGGAGGTGGCCGAAATCCGACGCCAGGTACCGACGCTTGTGCCCGGGCTCGCGATCGTTCAGGTCGGTGGGCGCGAAGACTCGAACGTGTACATCCGGATGAAGATCAAGGCGGCGGAAGAGATCGGCATGTACGCCGAGCACGTGCAGCTGCCCCGTTCCACTACGCAGGATGAGCTGTTGGCAACGGTCAAACGACTTAACGAGGATCCTTGCTTCCATGGCATTATCGTGCAGATGCCACTCGACTCGGAAACGCCGATCGATGCACATCTCATTACCGATGCCGTCTCGCCGGAAAAGGACGTTGATGGCCTGAACACGATCAACGAGGGACGCGTCGCAACGGGCGACATGTCCGGCTTTTTGCCCTGCACGCCGAACGG ]
[+] EMBL BM654384 [ CCGCCCACGCGTCCGCCC ACGCGTCCGGCACGGCAGCACTAGCAGCAGCAGTAGTAGCAGCATCCCGGAAGTTATCACTAGCGGTCCTACAGCAGCATCCTGACACGATCGCTGATCGCTGGGCAATAGAGAGATCCTGCAAGAGGCAACTGCTACCGACGCGTGCACTACTACTCCACACCTGCGACAGTTTCGACAGCAAAATGCTGAACGGTGCAAAGATCCTTTCCGGCACGGATGTGGCCAAAGAAATTCGCGAACGGCTGAAGAAGGAGGTGGCCGAAATCCGACGCCAGGTACCGACGCTTGTGCCCGGGCTCGCGATCGTTCAGGTCGGTGGGCGCGAAGACTCGAACGTGTACATCCGGATGAAGATCAAGGCGGCGGAAGAGATCGGCATGTACGCCGAGCACGTGCAGCTGCCCCGTTCCACTACGCAGGATGAGCTGTTGGCAACGGTCAAACGACTTAACGAGGATCCTTGCTTCCATGGCATTATCGTGCAGATGCCACTCGACTCGGAAACGCCGATCGATGCACATCTCATTACCGATGCCGTCTCGCCGGAAAAGGACGTTGATGGCCTGAACACGATCAACGAGGGACGCGTCGCAACGGGCGACATGTCCGGCTTTTTGCCCTGCACGCCGAACGGTTGCATGGAGCTGATCAAGCGCACCGGGCACA ]
[+] EMBL BM628700 [ CCGCGGACGCGTGGGCACTGGTCGAGTTCGGCACGGCAGCACTAGCAGCAGCAGTAGTAGCAGCATCCCGGAAGTTATCACTAGCGGTCCTACAGCAGCATCCTGACACGATCGCTGATCGCTGGGCAATAGAGAGATCCTGCAAGAGGCAACTGCTACCGACGCGTGCACTACTACTCCACACCTGCGACAGTTTCGACAGCAAAATGCTGAACGGTGCAAAGATCCTTTCCGGCACGGATGTGGCCAAAGAAATTCGCGAACGGCTGAAGAAGGAGGTGGCCGAAATCCGACGCCAGGTACCGACGCTTGTGCCCGGGCTCGCGATCGTTCAGGTCGGTGGGCGCGAAGACTCGAACGTGTACATCCGGATGAAGATCAAGGCGGCGGAAGAGATCGGCATGTACGCCGAGCACGTGCAGCTGCCCCGTTCCACTACGCAGGATGAGCTGTTGGCAACGGTCAAACGACTTAACGAGGATCCTTGCTTCCATGGCATTATCGTGCAGATGCCACTCGACTCGGAAACGCCGATCGATGCACATCTCATTACCGATGCCGTCTCGCCGGAAAAGGACGTTGATGGCCTGAACACGATCAACGAGGGACGCGTCGCAACGGGCGACATGTCCGGCTTTTTGCCCTGCACGCCGAACGGTTGCATGGAGCTGATCAAGCGCACCGGGCACACCGATCGCCGGCTC ]
[+] EMBL BM629317 [ cCGGCACTGGTCGAGTTCGGCACGGCAGCACTAGCAGCAGCAGCAGTAGCAGCATCCTGGAAGTTATCACTAGCGGTCCTACAGCAGCATCCTGACGCGATCGCTGATCGCTGGGCAATAGAGAGATCCTGCAAGAGGCAACTGCTACCGACGCGTGCACTACTACTCCACACCTGCGACAGTTTCGACAGCAAAATGCTGAACGGTGCAAAGATCCTTTCCGGCACGGATGTGGCCAAAGAAATTCGCGAACGGCTGAAGAAGGAGGTGGCCGAAATCCGACGCCAGGTACCGACGCTTGTGCCCGGGCTCGCGATCGTTCAGGTCGGTGGGCGCGAAGACTCGAACGTGTACATCCGGATGAAGATCAAGGCGGCGGAAGAGATCGGCATGTACGCCGAGCACGTGCAGCTGCCCCGTTCCACTACGCAGGATGAGCTGTTGGCAACGGTCAAACGACTTAACGAGGATCCTTGCTTCCATGGCATTATCGTGCAGATGCCACTCGACTCGGAAACGCCGATCGATGCACATCTCATTACCGATGCCGTCTCGCCGGAAAAGGACGTTGATGGCCTGAACACGATCAACGAGGGACGCGTCGCAACGGGCGACATGTCCGGCTTTTTGCCCTGCACGCCGAACGGTTGCATGGAGCTGATCAAGCGCACC GGCACACCGATCGCCGGCTCGTACGCCGTTGTGA ]
[+] EMBL BM604003 [ ccGCACTGGTCGAGTTCGGCACGGCAGCACTAGCAGCAGCAGTAGTAGCAGCATCCCGGAAGTTATCACTAGCGGTCCTACAGCAGCATCCTGACACGATCGCTGATCGCTGGGCAATAGAGAGATCCTGCAAGAGGCAACTGCTACCGACGCGTGCACTACTACTCCACACCTGCGACAGTTTCGACAGCAAAATGCTGAACGGTGCAAAGATCCTTTCCGGCACGGATGTGGCCAAAGAAATTCGCGAACGGCTGAAGAAGGAGGTGGCCGAAATCCGACGCCAGGTACCGACGCTTGTGCCCGGGCTCGCGATCGTTCAGGTCGGTGGGCGCGAAGACTCGAACGTGTACATCCGGATGAAGATCAAGGCGGCGGAAGAGATCGGCATGTACGCCGAGCACGTGCAGCTGCCCCGTTCCACTACGCAGGATGAGCTGTTGGCAACGGTCAAACGACTTAACGAGGATCCTTGC ]
[+] EMBL BM575412 [ ccGCACTGGTCGAGTTCGGCACGGCAGCACTAGCAGCAGCAGTAGTAGCAGCATCCCGGAAGTTATCACTAGCGGTCCTACAGCAGCATCCTGACACGATCGCTGATCGCTGGGCAATAGAGAGATCCTGCAAGAGGCAACTGCTAC ]
[+] EMBL BM626938 [ ccgGGCACGGCAGCACTAGCAGCAGCAGTAGTAGCAGCATCCCGGAAGTTATCACTAGCGGTCCTACAGCAGCATCCTGACACGATCGCTGATCGCTGGGCAATAGAGAGATCCTGCAAGAGGCAACTGCTACCGACGCGTGCACTACTACTCCACACCTGCGACAGTTTCGACAGCAAAATGCTGAACGGTGCAAAGATCCTTTCCGGCACGGATGTGGCCAAAGAAATTCGCGAACGGCTGAAGAAGGAGGTGGCCGAAATCCGACGCCAGGTACCGACGCTTGTGCCCGGGCTCGCGATCGTTCAGGTCGGTGGGCGCGAAGACTCGAACGTGTACATCCGGATGAAGATCAAGGCGGCGGAAGAGATCGGCATGTACGCCGAGCACGTGCAGCTGCCCCGTTCCACTACGCAGGATGAGCTGTTGGCAACGGTCAAACGACTTAACGAGGATCCTTGCTTCCATGGCATTATCGTGCAGATGCCACTCGACTCGGAAACGCCGATCGATGCACATCTCATTACCGATGCCGTCTCGCCGGAAAAGGACGTTGATGGCCTGAACACGATCAACGAGGGACGCGTCGCAACGGGCGACATGTCCGGCTTTTTGCCCTGCACGCCGAACGGTTGCATGGAGCTGATCAAGCGCACCGGGCACACCGATCGCCGGCTCGTACGCCGTTGTGA ]
[+] EMBL BM632613 [ ccgCACGATCGCTGATCGCTGGGCAATAGAGAGATCCTGCAAGAGGCAACTGCTACCGACGCGTGCACTACTACTCCACACCTGCGACAGTTTCGACAGCAAAATGCTGAACGGTGCAAAGATCCTTTCCGGCACGGATGTGGCCAAAGAAATTCGCGAACGGCTGAAGAAGGAGGTGGCCGAAATCCGACGCCAGGTACCGACGCTTGTGCCCGGGCTCGCGATCGTTCAGGTCGGTGGGCGCGAAGACTCGAACGTGTACATCCGGATGAAGATCAAGGCGGCGGAAGAGATCGGCATGTACGCCGAGCACGTGCAGCTGCCCCGTTCCACTACGCAGGATGAGCTGTTGGCAACGGTCAAACGACTTAACGAGGATCCTTGCTTCCATGGCATTATCGTGCAGATGCCACTCGACTCGGAAACGCCGATCGATGCACATCTCATTACCGATGCCGTCTCGCCGGAAAAGGACGTTGATGGCCTGAACACGATCAACGAGGGACGCGTCGCAACGGGCGACATGTCCGGCTTTTTGCCCTGCACGCCGAACGGTTGCATGGAGCTGATCAAGCGCACC GGCACACCGATCGCCGGCTCGTACGCCGTTGTGATCGGGCGCAGC ]
[+] EMBL BM607166 [ cCGGCTGAAGAAGGAGGTGGCCGAAATCCGACGCCAGGTACCGACGCTTGTGCCCGGGCTCGCGATCGTTCAGGTCGGTGGGCGCGAAGACTCGAACGTGTACATCCGGATGAAGATCAAGGCGGCGGAAGAGATCGGCATGTACGCCGAGCACGTGCAGCTGCCCCGTTCCACTACGCAGGATGAGCTGTTGGCAACGGTCAAACGACTTAACGAGGATCCTTGCTTCCATGGCATTATCGTGCAGATGCCACTCGACTCGGAAACGCCGATCGATGCACATCTCATTACCGATGCCGTCTCGCCGGAAAAGGACGTTGATGGCCTGAACACGATCAACGAGGGACGCGTCGCAACGGGCGACATGTCCGGCTTTTTGCCCTGCACGCCGAACGGTTGCATGGAGCTGATCAAGCGCACC GGCACACCGATCGCCGGCTCGTACGCCGTTGTGATCGGGCGCAGCAAGATCGTCGGTACGCCGATGTCGGAGCTGCTCAAGTGGGCCGATGCCACCGTCACGGTGGCCCACTCGAAGACGAAGAACCTCAACTTGCTGATTAAGAAGGCGGACATTCTGGTGGTTGCCGTCGGGCGTCCGGAGATGGTACGGGGCGCCTGGATAAAGCCCGGTGCCGTCGTCATCGACTGTGGCATCAACTCCATCCCGGACCCGAACG ]
[+] EMBL BM634113 [ ccgCGGTTGCATGGAGCTGATCAAGCGCACC GGCACACCGATCGCCGGCTCGTACGCCGTTGTGATCGGGCGCAGCAAGATCGTCGGTACGCCGATGTCGGAGCTGCTCAAGTGGGCCGATGCCACCGTCACGGTGGCCCACTCGAAGACGAAGAACCTCAACTTGCTGATTAAGAAGGCGGACATACTGGTGGTTGCCGTCGGGCGTCCGGAGATGGTACGGGGTGCATGGATAAAGCCCGGTGCCGTCGTCATCGACTGTGGCATTAACTCCATCCCGGACCCG ACGAAGAAGAGTGGCCAGCGGTTGGTGGGAGACGTAAAGTACGAGGAGGCACTCCCCGTTGCGTCGCACGTTACGCCGGTACCTGGAGGCGTCGGGCCGATGACGGTGGCGATGCTGATGCAGAACACCGTTCAGTCTGCCCAGAGAGTTGCCCGGAGATTGATCGAGATGGAGTTCCGCTGGTGCCTGAAGCCGCTGCCACTGAAGCTTACCGAACCGGTTCCGAGTGACATCGAGATCGCTCGTGCCCAGGAGCCGAGGGATGTGGCGGTGCTGGCGCAGGAGATTGGGCTAATACCCGTCGGACGGTTTCGCTGTACGGCACCAAGAAGGCGAACGTATCGCTGAAGGTGCTGCAGCGGCT]
consensusID : consensus_9412#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1060 fasta sequence
[GCCTACTGGNGATTTTANTTTCCGACCCCGTGAAGGTTGCTCCAATTGCACCAGGACGTACAGGGAAGATTCCCGTAAAACAACACATTCACTTATTGCCACTGGAAGAAGGCAGACCAGCTGAAACAAACATTCGGCTGAGGGTGTAAAACTGCAAGACAAAATGAAGGGACTGCTTCTGCTAGCAGCCTTGTTGTCGGTAGCCATATCGGCCACCGTTGCTGATCGGGCAGAGACGCTCAATCTCTTCAACCAGTTAAAGCGCGTGAAGAAGGGTCGCATGCTTGGTGCTGATGAGGACTTTGTATCGCTCGTCCAGTCACAGCTATTGCTGGCCGAAGAAGAGTACGTCCGCTCGTCCATAAATGGGGAGTCGTCGATTCTGCAGGAGCTGTCCACCGCGGAAGCACAGGCAAGTGGCCCGAACTGTGTAGACTTTATCCGCCAGAAGACGGCACTGATGCTGAATCTAGCTGGTGTATCGTATGCGTCCTGCCTGAGCCGTGTCGATGATGCGTTGTTTGAAAAGCTGTACGATGCAACGAATGGTGTGGTATCGCGCGAACAGTACGATCAGGCCAACATGCTTAACGCTTTCCGGGGTGAGAACATCTTTGTGGACATGGACCGTATTCGGGGCAAGCTGCAGGAGCGAATGCGTGCCACGTTCAAGCTGCCGACGTTGACTGCGGAATCGTTGCAGGAAATTCGCAGTGAGCTGGGTGAGGTGAAAGAACAGTTTGCAGAGTGCATGAAGGTGGCACGGGCCACACTGGATACTTCGCTCGAAAGCACTTCGAAGCAGTACAAGTCCATCGAGCTTCCCGAACGGGAGGATATGCATTCATGCATCTACATCCAGGTGTGTACGTTCCGATCTGCCATAGCAATTGGTGATACAGCTTTTTCCATCTCTAAAAAGAGGACAAATCAATAGAACATCGCTGGTGTGTCCATCTACAGGTTAATGAGGAAGAGAAGGGCAACATAACCGCTTCTTGCAGGATACCTACCCATGAGTGTGTTTGTTCTAATTGGCTACAGCAACAAAACGATACGC]
[+] EMBL CNS091SR [GCCTACTGGNGATTTTANTTTCCGACCCCGTGAAGGTTGCTCCAATTGCACCAGGACGTACAGGGAAGATTCCCGTAAAACAACACATTCACTTATTGCCACTGGAAGAAGGCAGACCAGCTGAAACAAACATTCGGCTGAGGGTGTAAAACTGCAAGACAAAATGAAGGGACTGCTTCTGCTAGCAGCCTTGTTGTCGGTAGCCATATCGGCCACCGTTGCTGATCGGGCAGAGACGCTCAATCTCTTCAACCAGTTAAAGCGCGTGAAGAAGGGTCGCATGCTTGGTGCTGATGAGGACTTTGTATCGCTCGTCCAGTCACAGCTATTGCTGGCCGAAGAAGAGTACGTCCGCTCGTCCATAAATGGGGAGTCGTCGATTCTGCAGGAGCTGTCCACCGCGGAAGCACAGGCAAGTGGCCCGAACTGTGTAGACTTTATCCGCCAGAAGACGGCACTGATGCTGAATCTAGCTGGTGTATCGTATGCGTCCTGCCTGAGCCGTGTCGATGATGCGTTGTTTGAAAAGCTGTACGATGCAACGAATGGTGTGGTATCGCGCGAACAGTACGATCAGGCCAACATGCTTAACGCTTTCCGGGGTGAGAACATCTTTGTGGACATGGACCGTATTCGGGGCAAGCTGCAGGAGCGAATGCGTGCCACGTTCAAGCTGCCGACGTTGACTGCGGAA ]
[+] EMBL BX608151 [ GATTCTGCAGGAGCTGTCCACCGCGGAAGCACAGGCAAGTGGCCCGAACTGTGTAGACTTTATCCGCCAGAAGACGGCACTGATGCTGAATCTAGCTGGTGTATCGTATGCGTCCTGCCTGAGCCGTGTCGATGATGCGTTGTTTGAAAAGCTGTACGATGCAACGAATGGTGTGGTATCGCGCGAACAGTACGATCAGGCCAACATGCTTAACGCTTTCCGGGGTGAGAACATCTTTGTGGACATGGACCGTATTCGGGGCAAGCTGCAGGAGCGAATGCGTGCCACGTTCAAGCTGCCGACGTTGACTGCGGAATCGTTGCAGGAAATTCGCAGTGAGCTGGGTGAGGTGAAAGAACAGTTTGCAGAGTGCATGAAGGTGGCACGGGCCACACTGGATACTTCGCTCGAAAGCACTTCGAAGCAGTACAAGTCCATCGAGCTTCCCGAACGGGAGGATATGCATTCATGCATCTACATCCAGGTGTGTACGTTCCGATCTGCCATAGCAATTGGTGATACAGCTTTTTCCATCTCTAAAAAGAGGACAAATCAATAGAACATCGCTGGTGTGTCCATCTACAGGTTAATGAGGAAGAGAAGGGCAACATAACCGCTTCTTGCAGGATACCTACCCATGAGTGTGTTTGTTCTAATTGGCTACAGCAACAAAACGATACGC]
consensusID : consensus_9412#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 852 fasta sequence
[TCTTCACTCGCGCTTTTTTATTGTTGGGGATTCCATTATAAATGTACACACGATTTACTGCGCTTAAATACGCGACGGGTAAAGCATGATTCTGATGCGATGGCCCATGGCGTGTCCGGGCAGGTTGGTGCGGAATCGTGCGCGAACGCTGCCACTGTTACCGTGCGAACGGGTAATCTTGCCCCAGATGGCGCGGATGGTGGACTTCTTGTTGCTTCCCGGGTGGTTCTGCTTGGACTTACCGCGGTACACGTACACGCACCGCTTGCCGATGTAGAACAGGACGTTCTTGCGGTTGCGGCAACCTTCAATCTTCAGCAGAGCGTGCTTCTCGTGCTGGTTGCGGACCCACGCTTGTAGCCGGTGAACACAGCCTTGGCCCACAGACGGCCGAAGCTCTTCTTCGGGCGCGGCAGGTTCGGTTTCGGGGTGCGCACTCCTTCGCACGCTTGACACGGGCACGGATCGCTTCCGGAGTTTGACGCGATTTGCGCGTCTCCCTTCGGGGCAGCCTTCGCGGCGTCACCTTGGCACCAGCCAATGTTCGACACGTCCACCTTGTCGTTCTGCATCTTGAAGTACACGCCGCAGCACGATCAGCGCACGCGCCCATGATGAAGCTGCTCTGCACAGCCAGTATCCGGCGGCCCGCCTTGTCGATCAGCACGGAGGAGGCGAGCGTCATTACGACCTGCACGACACCGACCACAATCGAGCAGACGGCCGGGTCCATGGTGCTGCCGGCCGACTGGAAGATTGGCGCCGTGTAGAAGATGACCGCATTGATGCCCGAGAACTGCTGGAAGAACATCAGCAGCAGCGAGATGAAGAGTGCCGCCCGGTTGGTTGGGT]
[+] EMBL CNS097CD [TCTTCACTCGCGCTTTTTTATTGTTGGGGATTCCATTATAAATGTACACACGATTTACTGCGCTTAAATACGCGACGGGTAAAGCATGATTCTGATGCGATGGCCCATGGCGTGTCCGGGCAGGTTGGTGCGGAATCGTGCGCGAACGCTGCCACTGTTACCGTGCGAACGGGTAATCTTGCCCCAGATGGCGCGGATGGTGGACTTCTTGTTGCTTCCCGGGTGGTTCTGCTTGGACTTACCGCGGTACACGTACACGCACCGCTTGCCGATGTAGAACAGGACGTTCTTGCGGTTGCGGCAACCTTCAATCTTCAGCAGAGCGTGCTTCTCGTGCTGGTTGCGGACCCACGCTTGTAGCCGGTGAACACAGCCTTGGCCCACAGACGGCCGAAGCTCTTCTTCGGGCGCGGCAGGTTCGGTTTCGGGGTGCGCACTCCTTCGCACGCTTGACACGGGCACGGATCGCTTCCGGAGTTTGACGCGATTTGCGCGTCTCCCTTCGGGGCAGCCTTCGCGGCGTCACCTTGGCACCAGCCAATGTTCGACACGTCCACCTTGTCGTTCTGCATCTTGAAGTACACGCCGCAGCACGATCAGCGCACGCGCCCATGATGAAGCTGCTCTGCACAGCCAGTATCCGGCGGCCCGCCTTGTCGATCAGCACGGAGGAGGCGAGCGTCATTACGACCTGCACGACACCGACCACAATCGAGCAGACGGCCGGGTCCATGGTGCTGCCGGCCGACTGGAAGATTGGCGCCGTGTAGAAGATGACCGCATTGATGCCCGAGAACTGCTGGAAGAACATCAGCAGCAGCGAGATGAAGAGTGCCGCCCGGTTGGTTGGGT]
consensusID : consensus_9412#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 838 fasta sequence
[CCGCCCACGCGTCCGCATCAAGTGCTTCACCAAGATCCTGAACGGTGAGCTCGACCATCTGCCGGAGGTGGCCTTCTACATGGTCGGCCCGATCGAGGAGGTCGTCGAGAAGGCGGAGCGTCTGGCCAAGGAGGCTGCCTAAGGTGGCTGAGCCCTCTTCACAGCAAACGCCTGCTGCCATTATCGAATTTCGAACGGTGCGCAGCTA-ACCAACACCACCACCACCACCACCACCAACAACCTGTACTGCTGCCATTCGTCAAAGCAAAAAAGCGGTTCCAAAACTGGCCGTTAGATTTTACTTAGAGAAGAGAATGCGTTTTGACCAGCGAAGAGAAAACCATCAGAAATCGTGGAGCACGAAAGTCGGTTTAAAGCAACTCAATCCCGTCACCACCAACACACACCACCACCATCTCTTACGAAACAACTCGAGCTGCGATTCTAACGTGCGCGCGTAACGACTGCCTTTCAAGACAAATCAGTGTGTGTGTGTGTGGAATGAGCTGACCAGCGTGAAATCCGGCAATGCACCTCCTCCCAAACACTACCATCCATCGCAGCGGATTTTGCAGCGGGTCACCACATTCGGTCATAATCGTTGTTAGAAAAAAAGCAGCCAATCGAATCGAAGAACATCCTAATCTATGAACGACGAACGAAAGAGAGAGAGAGCAAAGAACACGACTCTTAAGGTTCGGTTTTTTGTCGGTGCAAGAGTGTGGGGTAAATGTAGTGTGTATTTGTTGCTTTAAATTCGTTCGAAAATACACGTAATCGATAACAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAAGGTCCCCGGGGGG]
[+] EMBL BM652517 [CCGCCCACGCGTCCGCATCAAGTGCTTCACCAAGATCCTGAACGGTGAGCTCGACCATCTGCCGGAGGTGGCCTTCTACATGGTCGGCCCGATCGAGGAGGTCGTCGAGAAGGCGGAGCGTCTGGCCAAGGAGGCTGCCTAAGGTGGCTGAGCCCTCTTCACAGCAAACGCCTGCTGCCATTATCGAATTTCGAACGGTGCGCAGCTA ACCAACACCACCACCACCACCACCACCAACAACCTGTACTGCTGCCATTCGTCAAAGCAAAAAAGCGGTTCCAAAACTGGCCGTTAGATTTTACTTAGAGAAGAGAATGCGTTTTGACCAGCGAAGAGAAAACCATCAGAAATCGTGGAGCACGAAAGTCGGTTTAAAGCAACTCAATCCCGTCACCACCAACACACACCACCACCATCTCTTACGAAACAACTCGAGCTGCGATTCTAACGTGCGCGCGTAACGACTGCCTTTCAAGACAAATCAGTGTGTGTGTGTGTGGAATGAGCTGACCAGCGTGAAATCCGGCAATGCACCTCCTCCCAAACACTACCATCCATCGCAGCGGATTTTGCAGCGGGTCACCACATTCGGTCATAATCGTTGTTAGAAAAAAAGCAGCCAATCGAATCGAAGAACATCCTAATCTATGAACGACGAACGAAAGAGAGAG ]
[+] EMBL CNS08P85 [ ctggCGAATTTAAAACGGTGCGCA TAGACCAACACCACCACCACCACCAC CAACCTGTACTGCTGCCATTCGTCAAAGCAAAAAAGCGGTTCCAAAACTGGCCGTTAGATTTTACTTAGAGAAGAGAATGCGTTTTGACCAGCGAAGAGAAAACCATCAGAAATCGTGGAGCACGAAAGTCGATTTAAAACAACTCAATCCCGTCACCACCAACACACACCACCACCATCTCTTACGAAACAACTCGAGCTGCGATTCTAACGTGCGCGCGTAACGACTGCCTTTCAAGACAAATCA GTGTGTGTGTGTGGAATGAGCTGACCAGCGTGAAATCCGGCAATGCACCTCCTCCCAAACACTACCATCCATCGCAGCGGATTTTGCAGCGGGTCACCACATTCGGTCATAATCGTTGTTAGAAAAAAAGCAGCCAATCGAATCGAAGAACATCCTAATCTATGAACGACGAACGAAAGAAAGAGAGAGCAAAGAACACGACTCTTAAGGTTCGGTTTTTTGTCGGTGCAAGAGTGTGGGGTAAATGTAGTGTGTATTTGTTGCTTTAAATTCGTTCGAAAATACACGTAATCGATAACAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAAGGTCCCCGGGGGG]
consensusID : consensus_9412#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 664 fasta sequence
[CCGGCCCGATAAGTGTGCGTGTTTTCGTCGACGCCGGTTTTCCACTTGAACACTACAGCCACCAAACTTACCTCAAGCATCATGACCACCTACTTCAACTACCCACCAAAGGAGATTCAGGAGGAGCTGGCCCGCATCGCCAAGCAGATTGTTGCCCCCGGTAAGGGTATTTTGGCCGCCGTGCCCGGCGTCACCTTCCTGTCGGGCGGCCAGTCCGAGGAGGAGGCGTCCGTGAACCTGAGCGCCATCAACCAGGTGCCGCTGCTGAGACCGTGGGCCCTGACCTTCTCGTACGGTCGCGCCCTGCAGGCCTCGGTGCTGCGCGCCTGGGGCGGCAAGAAGGAGAACGTGAAGGCCGCCCAGGAGGAGCTGATCAAGCGCGCAAAGGCCAACAGCGATGCCGCCCTCGGCAAGTACGGCGGTGGTGTGGAGGGTGCCGCCGGTGCTGGCAGCCTGTTCGTCGCCAACCACGCTTACTAAGGCGTTCGTTCGCTCCGCTCTGCATCTACATGAACTTGCATCCCACTAGAACACAACCCTTTAGTACCACCCCACCACCCCCTGTCCCTCGTCCCGCCACATGCACACACACTCGCACAGTGGCAAACAACACTCCCGGAGCGGCAATCTTCGCATTCGGTTACTATGCTGAGTGTAAGTGAAG]
[+] EMBL BM656779 [CCGGCCCGATAAGTGTGCGTGTTTTCGTCGACGCCGGTTTTCCACTTGAACACTACAGCCACCAAACTTACCTCAAGCATCATGACCACCTACTTCAACTACCCACCAAAGGAGATTCAGGAGGAGCTGGCCCGCATCGCCAAGCAGATTGTTGCCCCCGGTAAGGGTATTTTGGCCGCCGTGCCCGGCGTCACCTTCCTGTCGGGCGGCCAGTCCGAGGAGGAGGCGTCCGTGAACCTGAGCGCCATCAACCAGGTGCCGCTGCTGAGACCGTGGGCCCTGACCTTCTCGTACGGTCGCGCCCTGCAGGCCTCGGTGCTGCGCGCCTGGGGCGGCAAGAAGGAGAACGTGAAGGCCGCCCAGGAGGAGCTGATCAAGCGCGCAAAGGCCAACAGCGATGCCGCCCTCGGCAAGTACGGCGGTGGTGTGGAGGGTGCCGCCGGTGCTGGCAGCCTGTTCGTCGCCAACCACGCTTACTAAGGCGTTCGTTCGCTCCGCTCTGCATCTACATGAACTTGCATCCCACTAGAACACAACCCTTTAGTACCACCCCACCACCCCCTGTCCCTCGTCCCGCCACATGCACACACACTCGCACAGTGGCAAACAACACTCCCGGAGCGGCAATCTTCGCATTCGGTTACTATGCTGAGTGTAAGTGAAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9412#0 CCGCGGACGCGTCCGCGGACGCGTCGGCACTGGTCGAGTTCGGCACGGCAGCACTAGCAG 60
consensus_9412#3 ------------------------------------------------------------
consensus_9412#4 ------------------------------------------------------------
consensus_9412#1 ------------------------------------------------------------
consensus_9412#2 ------------------------------------------------------------
consensus_9412#0 CAGCAGTAGTAGCAGCATCCCGGAAGTTATCACTAGCGGTCCTACAGCAGCATCCTGACA 120
consensus_9412#3 ------------------------------------------------------------
consensus_9412#4 ------------------------------------------------------------
consensus_9412#1 ------------------------------------------------------------
consensus_9412#2 ------------------------------------------------------------
consensus_9412#0 CGATCGCTGATCGCTGGGCAATAGAGAGATCCTGCAAGAGGCAACTGCTACCGACGCGTG 180
consensus_9412#3 ------------------------------------------------------------
consensus_9412#4 ------------------------------------------------------------
consensus_9412#1 ------------------------------------------------------------
consensus_9412#2 ------------------------------------------------------------
consensus_9412#0 CACTACTACTCCACACCTGCGACAGTTTCGACAGCAAAATGCTGAACGGTGCAAAGATCC 240
consensus_9412#3 ------------------------------------------------------------
consensus_9412#4 ------------------------------------------------------------
consensus_9412#1 ------------------------------------------------GCCTACTGGNGA 12
consensus_9412#2 ------------------------------------------------------------
consensus_9412#0 TTTCCGGCACGGATGTGGCCAAAGAAATTCGCGAACGGCTGAAGAAGGAGGTGGCCGAAA 300
consensus_9412#3 ------------------------------------------------------------
consensus_9412#4 ------------------------------------------------------------
consensus_9412#1 TTTTANTTTCCGACCCCGTGAAGGTTGCTC-CAATTGCACCAGGACGTACAGGGAAGATT 71
consensus_9412#2 ------------------------------------------------------------
consensus_9412#0 TCCGACGCCAGGTACCGACGCTTGTGCCCGGGCTCGCGATCGTTCAGGTCGGTGGGCGCG 360
consensus_9412#3 ------------------------------------------------------------
consensus_9412#4 ------------------------------------------------------------
consensus_9412#1 CCCGTAAAACAACACATTCACTTATTGCCA---CTGGAAGAAGGCAGACCAGCTGAAACA 128
consensus_9412#2 ------------------------------------------------------------
consensus_9412#0 AAGACTCGAACGTGTACATCCGGATGAAGATCAAGGCGGCGGAAG---AGATCGGCATGT 417
consensus_9412#3 -CCGCCCACGCGTCCGCATCAAGTGCTTCACCAAGATCCTGAACGGTGAGCTCGAC-CAT 58
consensus_9412#4 ------------------------------------------------------------
consensus_9412#1 AACATTCGGCTGAGGGTGTAAAACTGCAAGACAAAATGAAGGGACT--GCTTCTGCTAGC 186
consensus_9412#2 -----------------------------------------------TCTTCACTCGCGC 13
consensus_9412#0 ACGCCGAGCACGTGCAGCTGCCCCGTTCCACTACGCAGGATGAGCTGTTGGCAACGGTCA 477
consensus_9412#3 CTGCCGGAGGTGGCCTTCTACATGGT--CGGCCCGATCGAGGAGGTCGTCGAGAAGGCGG 116
consensus_9412#4 ------------------------------------------------------------
consensus_9412#1 AGCCTTGTTGTCGGTAGCCATATCG----GCCACCGTTGCTGATCGGGCAGAGACGCTCA 242
consensus_9412#2 TTTTTTATTGTTGGGGATTCCATTATAAATGTACACACGATTTACTGCGCTTAAATACGC 73
consensus_9412#0 AACGACTTAACGAGGATCCTTGCTTCCATGGCATTATCGTGCAGATGCCACTCGACTCGG 537
consensus_9412#3 AGCGTCTGGCCAAGGAGGCTGCCTAAGGTGGCT----------GAGCCCTCTTCACA-GC 165
consensus_9412#4 ----------------------------------------------CCGGCCCGATAAGT 14
consensus_9412#1 ATCTCTTCAACCAGTTAAAGCGCGTGAAGAAGG-------GTCGCATGCTTGGTGCTGAT 295
consensus_9412#2 GACGGGTAAAGCATGATTCTGATGCGATGGCCCAT--------GGCGTGTCCGGGCAGGT 125
consensus_9412#0 AAACGCCGATCGATGCACATCTCATTACCGATGCCGTCTCGCCGGAAAAGGACGTTGATG 597
consensus_9412#3 AAACGCCTGCTGCCAT-TATCGAATTTCGAACGGTG---CGCAGCTAACCAACACCACCA 221
consensus_9412#4 GTGCGTGTTTTCGTCGACGCCGGTTTTCCACTTGAACACTACAGCCACCAAAC-TTACCT 73
consensus_9412#1 GAGGACTTTGTATCGCTCGTCCAGTCACAGCTATTGC-TGGCCGAAGAAGAGT-ACGTCC 353
consensus_9412#2 TGGTGCGGAATCGTGCGCGA-ACGCTGCCACTGTTACCGTGCGAACGGGTAATCTTGCCC 184
* *
consensus_9412#0 GCCTGAACACGATCAACGAGGGAC--GCGTCGCAACGGGCGAC-ATG-TCCGGCTTTTTG 653
consensus_9412#3 CCACCACCACCACCAACAACCTGT--ACTGC-TGCCATTCGTC-AAA-GCAAAAAAGCGG 276
consensus_9412#4 CAAGCATCATGACCACCTACTTCA--ACTACCCACCAAAGGAG-ATT-CAGGAGGAGCTG 129
consensus_9412#1 GCTCGTCCATAAATGGGGAGTCGTCGATTCTGCAGGAGCTGTCCACC-GCGGAAGCACAG 412
consensus_9412#2 CAGATGGCGCGGATGGTGGACTTCTTGTTGCTTCCCGGGTGGTTCTGCTTGGACTTACCG 244
* * *
consensus_9412#0 CCCTGCA-CGCCGAACG-GTTGCATGGAGCTGATCAAGCGCACCGGCACACCGATCGCCG 711
consensus_9412#3 TTCCA-A-AACTGGCCG-TTAGATTTTACTTAGAGAAGAGAAT--GCGTTTTGACCAGCG 331
consensus_9412#4 GCCCGCATCGCCAAGCA-GATTGTTGCCCCCGGT-AAGGGTATTTTGGCCGCCGTGCCCG 187
consensus_9412#1 GCAAGTGGCCCGAACTGTGTAGACTTTATCCGCCAGAAGACGGCACTGATGCTGAATCTA 472
consensus_9412#2 CGGTACACGTACACGCACCGCTTGCCGATGTAGAACAGGACGTTCTTGCGGTTGCGGCAA 304
*
consensus_9412#0 GCTCGTACGCCGT-TGTGATCGGGCGCAGCAAGATCGTCGGTACGCCGATGTCGGAGCTG 770
consensus_9412#3 AAGAGAAAACCAT-CA-GAAATCGTGGAGCACGAAAGTCGGT---------TTAAAGCAA 380
consensus_9412#4 GCGTCACCTTCCT-GTCGGGCGGCCAGTCCGAGGAGGA-GGCGTCCGTGAACCTGAGCGC 245
consensus_9412#1 GCTGGTGTATCGTATGCGTCCTGCCTGAGCCGTGTCGATGATGCGTTGTTTGAAAAGCTG 532
consensus_9412#2 CCTTCAATCTTCAGCA-GAGCGTGCTTCTCGTGCTGGTTGCGGACCCACGCTTGTAGCCG 363
* * * * ***
consensus_9412#0 CTCAAGTGGGCCGATGCC-ACCGTCACGGTGG-CCCACTCGAAGACGAAGAACCTCAACT 828
consensus_9412#3 CTCAATCCCGTCACCACC-AACA-CACACCAC-CACCATCTCTTACGAAACAACTCGAGC 437
consensus_9412#4 CATCAACCAGGTGCCGCT-GCTGAGACCGTGGGCCCTGACCTTCTCGTACGGTCGCGCCC 304
consensus_9412#1 TACGATGCAACGAATGGT-GTGG-TATCGCGCGAACAGTACGAT-CAGGCCAACATGCTT 589
consensus_9412#2 GTGAACACAGCCTTGGCCCACAGACGGCCGAAGCTCTTCTTCGGGCGCGGCAGGTTCGGT 423
* * *
consensus_9412#0 TGCTGATTAAGAAG----GCGGACATTCT-GGTGGTTGCCGTCGGGCGTCCGGAGATGGT 883
consensus_9412#3 TGCGATTCTAACGT----GCGCGCGT----AACGACTGCC--------TTTCAAGACAAA 481
consensus_9412#4 TGCAGGCCTCGGTG----CTGCGCGCC---TGGGGCGGCAA-------GAAGGAGAACGT 350
consensus_9412#1 AACGCTTTCCGGGGT---GAGAACATCTT-TGTGGACATGGACCG-TATTCGGGGCAAGC 644
consensus_9412#2 TTCGGGGTGCGCACTCCTTCGCACGCTTGACACGGGCACGGATCGCTTCCGGAGTTTGAC 483
* * * *
consensus_9412#0 ACGGGGCGCCTGGATAAAGCCCGGTGCCGTCGTCATCG----ACTGTGGCATCA-ACTCC 938
consensus_9412#3 TCAGTGTGTGTGTGTGTGGAATGAGCTGACCAGCGTGA----AATCCGGCAATGCACCTC 537
consensus_9412#4 GAAGGCCGCCCAGGAGGAGC-TGATCAAGC--GCGCAA----AGGCCAACAGCG-ATGCC 402
consensus_9412#1 TGCAGGAGCGAATGCGTGCCACGTTCAAGC---TGCCG----ACGTTGACTGCGGAATCG 697
consensus_9412#2 GCGATTTGCGCGTCTCCCTT-CGGGGCAGCCTTCGCGGCGTCACCTTGGCACCA--GCCA 540
* * * *
consensus_9412#0 ATCCCGGACCCGAACGAGAAGAGTGGCCAGCGGTTGG-TGGGAGACGTAAAGTACGAGGA 997
consensus_9412#3 CTCCCAAACACTA-------------CCATCCATCG--CAGCGGATTT----TGCAGCGG 578
consensus_9412#4 GCCCTCGGCAAGTA-------------CGGCGGTGGTGTGGAGGGTGC----CGCCGGTG 445
consensus_9412#1 TTGCAGGAAATTCGCAGTGAGCTGGGTGAGGTGAAAG-AACAGTTTGCAGAGTGCATGAA 756
consensus_9412#2 ATGTTCGACACGTCC----ACCTTGTCGTTCTGCATCTTGAAGTACACGCCGCAGCACGA 596
consensus_9412#0 GGCACTCCCCGTTGCGTCGCACGTTACGCCGGTACCTGGAGGCGTCGGGCCGATGACGGT 1057
consensus_9412#3 GTCAC--CACATTCGGTCATAATCGTTGTTAGAA--AAAAAGCAGCCAATCGA-ATCGAA 633
consensus_9412#4 CTGGCAGCCTGTT-CGTCGCCAACCACGCTTACT----AAGGCGTTCGTTCGC-TCCGCT 499
consensus_9412#1 GGTGGCACGGGCCACACTGGATACTTCGCTCG------AAAGCACTTCGAAGCAGTACAA 810
consensus_9412#2 TCAGC-GCACGCGCCCATGATGAAGCTGCTCTGCACAGCCAGTATCCGGCGGCCCGCCTT 655
* * * *
consensus_9412#0 GGCGATGCTGATGCA-GAAC--ACCGTTCAGTCTGCCCAGAGAGTTGCCCGGAGATTGAT 1114
consensus_9412#3 GAACATCCTAATCTATGAAC--GACGAACGAAAGAGAGAGAGAGCAAAGAACACGACTCT 691
consensus_9412#4 CTGCATCTACATG---AACT--TGCATCCCACTAGAACACAACCCTTTAGTACCACCCCA 554
consensus_9412#1 GTCCATCGAGCTTCCCGAAC--GGGAGGATATGCATTCATGCATCTACATCCAGGTGTGT 868
consensus_9412#2 GTCGATCAGCACGGAGGAGGCGAGCGTCATTACGACCTGCACGACACCGACCACAATCGA 715
** *
consensus_9412#0 CGAGAT----GGAGTTCCGCTGGTGCCTGAAGCCGCTGCCACTG-AAGCTTACCGAACCG 1169
consensus_9412#3 TAAGGT--TCGGTTTTTTGTCGGTGCAAGAGTGTGGGGTAAATG-TAGTGTGTATTTGTT 748
consensus_9412#4 CCACCC--CCTGTCCCTCGTCC-CGCCACATGCACACACACTCG-CACAGTGGCAAACAA 610
consensus_9412#1 --ACGT--TCCGATCTGCCATAGCAATTGGTGATACAGCTTTTT-CCATCTCTAAAAAGA 923
consensus_9412#2 GCAGACGGCCGGGTCCATGGTGCTGCCGGCCGACTGGAAGATTGGCGCCGTGTAGAAGAT 775
* * *
consensus_9412#0 GTTCCGAGTGA-CATCGAGATCGCT--CGTGCCCAGGAGCCGAGGGATGTGGCGGTGCTG 1226
consensus_9412#3 GCTTTAAATTC-GTTCGAAAATACA--CGTAATCGATAACAGAAAAAAAAAAAAAAAAAA 805
consensus_9412#4 CACTC---CCG-GAGCGGCAATCTT--CGCATTCGGTTACTATGCTGAGTGTAAGTGAAG 664
consensus_9412#1 GGA-CAAATCA-ATAGAACATCGCTGGTGTGTCCATCTACAGGTTAATGAGGAAGAGAAG 981
consensus_9412#2 GACCGCATTGATGCCCGAGAACTGCTGGAAGAACATCAGCAGCAGCGAGATGAAGAGTGC 835
* * *
consensus_9412#0 GCGCAGGAGATTGGGCT------AATACCCGTCGGACGGTTTCGCTGTACGGCACCAAGA 1280
consensus_9412#3 AAAAAAAAAAAAAGGCC------AAAGGTCCCCGGGGGG--------------------- 838
consensus_9412#4 ------------------------------------------------------------
consensus_9412#1 GGCAACATAACCGCTTCTTGCAGGATACCTACCCATGAGTGTGTTTGTTCTAATTGGCTA 1041
consensus_9412#2 CGCCCGGTTGGTTGGGT------------------------------------------- 852
consensus_9412#0 AGGCGAACGTATCGCTGAAGGTGCTGCAGCGGCT 1314
consensus_9412#3 ----------------------------------
consensus_9412#4 ----------------------------------
consensus_9412#1 CAGCAACAAAACGATACGC--------------- 1060
consensus_9412#2 ----------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||