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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9415#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1487 fasta sequence
[CGCCCGAGGTTTAATACATGCTACGATTGAGTCATATAGACACACCACCAGTGAAGGAAGCATCGAAAAGAGTGCGTGCGACGTCTGTGTGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGCAAGTTCCTTAAAAGGGGTAAATTTTGCGGATCTGCCGTCGA-TTGGAGAGGCACAGTTTTCG-TTGAGCAAG-TATAACACATTCCACCGGAAGGTGAAA-CGGCCAACGCCAAAGGCAACGAATTTGCACAACCTCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAG-AGTAACGCAGCTGCACTTGTGAGGATTTAATCACACAAAGATGACTAAAGATGGACCACCACCGTACGGGTTCGTGCCGCCACAATCGGCACCACCGAGCTATGCGCAAGCCGTAGGAGGTGTTCCTCCGTCGAGCCCGTTCACACCGCAGCAACCGGTACTGACCGGAGCACAGATCGTTACCACGGTCGTGCCGATCGGGCCCCAGTCGACACACATGATATGCCCCAGTTGCCATGCAGAAGTGAATACTAAGACGACAACATCGCCAGGAATGATTGCCTATGTGTCCGGGTTTCTGATCGCATTGTTCGGATGCTGGTTAGGATGCTGCCTAATACCTTGCTGCATTGACGAATGTATGGATGTACATCATACGTGCCCACACTGTAAAGCATATTTGGGACGGCACAGGCGATAAACCTGCGCGACAGCTATAACAGAACTTACCCCGTCTGTGTGGGTGTGTAACAGATGGTCTGATAATTGTTTGGCCTATGATAGTAAAACACATTTTTTGGCTAACTTTTGTTTTCTCTATGCAAAATATATCGATTCAAGATATACCAATTAAAGTGATTTTATTTTGGCCATTGGTTCTCACTGATTTGTGACCCAACAACTCTTTGTTTTTGGTCCAATGTGAGCTCGCATAGAGCTTTCTCACATCCAAATATTTGTGAACGATATAAGCAAAATATTATTTTGATATCTTTCTGGATCAACTTCACTTAACGGTTGTTTTTCATTAATTTGTGGATTTTTTATGTTTTCGTCGGTATCTTCTAGTAGTACTATCTATGCGATAGGCCGAACAATAATCAGCCCACCTGTTAGTTCAATCCATCGATAAATGTCGAAGGACATTGCACTGCCCAGACGGAAGTAAACAATGAGCGAACGAAGAGAAATTGTATCGTATGTGTGTGTGCTTAACAATTCCAAATCCAATATGCTTCAAAGGAGACTATCGACTACTTGTGTTCTTGAAACTTGAGCTACTCTATCATCACTACCCAGTACTACGTGCATGACGAATTAGCACCGATCTTCAGTGTTAGGGCAAATGTAGGGCTAATTGGGGCGTCGAATTGATTTTAGCAGCGGGCGGTGAAATTACATAAACGCGATAAAGTCCAAAGATCAAAAAAAAAAAAAAAA]
[+] EMBL AL930596 [CGCCCGAGGTTTAATACATGCTACGATTGAGTCATATAGACACACCACCATTGAAGGAAGCATCGAAAAGAGTGCGTGCGACGTCTGTGTGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGCAAGTTCCTTAAAAGGGGTAAATTTTGCGGATCTGCCGTCGACTTGGAGAGGCACAGTTTTCGCTTGAGCAAGCTATAACACATTCCACCGGAAGGTGAAA CGGCCAACGCCAAAGGCAACGAATTTGCACAACCTCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAGCAGTAACGCAGCTGCACTTGTGAGGATTTAATCACACAAAGATGACTAAAGATGGACCACCACCGTACGGGTTCGTGCCG CACAATCGG ACCACCGAGCTATGCGCAAGCCGTAGGAGGTGTTCCTCCGTCGAGCCCGTTCACACCGCAGCAACCGGTACTGACCGGAGCACAGATCGTTACCACGGTCGTGCCGATCGGGCCCCAGTCGACACATATGATATGCCCCAGTTGCCATGCAGAAGTGAAT ]
[+] EMBL BX603612 [ GATTGAGTCATATAGACACACCACCAGTGAAGGAAGCATCGAAAAGAGTGCGTGCGACGGCTGTGTGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGTAAGTTCCTTAAAAGGGGTAAATTTTGCGGATCTGCCGTCGA TTGGAGAGGCACAGTTTTCG TTGAGCAAG TATAACACATTCCACCGGAAGGTGAAA CGGCCAACGCCAAAGGCAACGAATTTGCACAACCTCCGACAATAAGCGTCATTGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAG AGTAACGCAGCTGCACTTGTGAGGATTTAATCACACAAAGATGACTAAAGATGGACCACCACCGTACGGGTTCGTGCCGCCACAATCGGCACCACCGAGCTATGCGCAAGCCGTAGGAGGTTTTCCTCCGTCGAGCCCGTTCACACCGCAGCAACCGGTACTGACCGGAGCACAGATCGTTACCACGGTCGTGCCGATCGGGCCCCAGTCGACACACATGATATGCCCCAGTTGCCATGCAGAAGTGAATACTAAGACGACAACATCGCCAGGAATGATTGCCTACGTGTCCGGGTTTCTGATCGCATTGTTCGGATGCTGGTTAGGATGCTGCCTAATACCTTGCTGCATTGACGAATGTATGGATGTACATCATACGTGCCCACACTGTAAAGCATATTTGGGACGGCACAGGCGATAAACCTGCGCGACAGCTATAACAGAACTTACCCCGTCTGTGTGGG ]
[+] EMBL CNS09DSC [ TATAGACACACCACCAGTGAAGGAAGCATCGAAAAGAGTGCGTGCGACGTCTGTGTGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGTAAGTTCCTTAAAAGGGGTAAATTTTGCGGATCTGCCGTCGA TTGGAGAGGCACAGTTTTCG TGGAGCAAG TATAACAAATTCCACCGGAAGG GAAACCGGCCAACGCCAAAGGCAACGAATTTGCACAACCTCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAG AGTAACGCAGCTGCACTTGTGAGGATTTAATCACACAAAGATGACTAAAGATGGACCACCACCGTACGGGTTCGTGCCGCCACAATCGGCACCACCGAGCTATGCGCAA CCGTA GAGGTGTTCCTCCGTCGAGCCCGTTCACACCGCAGCAACCGGTACTGACCGGAGCACAGATCGTTACCACGGTCGTGCCGATCGGGCCCCAGTCGACACACATGATATGCCCCAGTTGCCATGCAGAAGTGAATACTAAGACGACAACATCGCCAGGAATGATTGCCTATGTGTCCGGGTTTCTGATCGCATTGTTCGGATGCTGGTTAGGATGCTGCCTAATACCTTGCTGCATTGACGAATGTATGGATGTACATCATACGTGCCCACACTGTAAAGCATATTTGGGACGGCACAGGCGATAAACCTGCGCGACA CTATAACAGAACTTACCCCGTCTGTGTGGGTGTGT ACAGATGGTCTGATAATTGTTTGGCCTATGATAGTAAAACACATTTTTTGGCTAACTTTTGTTTTCTCTATGCAAAATATATCGATTCAAGATATACCAATTAAAGTGATTTTATTTTGGCCATTGGTTCTCACTGATTTGTGACCCAACAACTCTTTGTTTTTGGTCCAATGTGAGCTCGCATAGAGCTTTCTCACAT ]
[+] EMBL BM615868 [ CCGGTGAAGGAAGCATCGAAAAGAGTGCGTGCGACGTCTGTGTGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGCAAGTTCCTTAAAAGGGGTAAATTTTGCGGATCTGCCGTCGA TTGGAGAGGCACAGTTTTCG TTGAGCAAG TATAACACATTCCACCGGAAGGTGAAA CGGCCAACGTCAAAGGCAACGAATTTGCACAACCTCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAG AGTAACGCAGCTGCACTTGTGAGGATTTAATCACACAAAGATGACTAAAGATGGACCACCACCGTACGGGTTCATGCCGCCACAATCGGCACCACCGAGCTATGCGCAAGCCGTAGGAGGTGTTCCTCCGTCGAGCCCGTTCACACCGCAGCAACCGGTACTGACCGGAGCACAGATCGTTACCACGGTCGTGCCGATCGGGCCCCAGTCGACACACATGATATGCCCCAGTTGCCATGCAGAAGT ]
[+] EMBL BM654362 [ ccgATCGAAAAGAGTGCGTGCGACGTCTGTGTGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGCAAGTTCCTTAAAAGGGGTAAATTTTGCGGATCTGCCGTCGA TTGGAGAGGCACAGTTTTCG TTGAGCAAG TATAACACATTCCACCGGAAGGTGAAA CGGCCAACGCCAAAGGCAACGAATTTGCACAACCTCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAG AGTAACGCAGCTGCACTTGTGAGGATTTAATCACACAAAGATGACTAAAGATGGACCACCACCGTACGGGTTCGTGCCGCTACAATCGGCACCACCGAGCTATGCGCAAGCCGTAGGAGGTGTTCCTCCGTCGAGCCCGTTCACACCGCAGCAACCGGTACTGACCGGAGCACAGATCGTTACCACGGTCGTGCCGATCGGGCCCCAGTCGACACATATGATATGCCCCAGTTGCCATGCAGAAGTGAATACTAAGACGACAACATCGCCAGGAATGATTGCCTATGTGTCCGGGTTTCTGATCGCATTATTCGGATGCTGGTTAGGATGCTGCCTAATACCTTGCTGCATTGACGAATGTATGGATGTACATCATACGTGCCCACACTGTAAAGCATATTTGGGACGG ]
[+] EMBL BX602503 [ GAAAAGAGTGCGTGCGACGGCTGTGTGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGTAAGTTCCTTAAAAGGGGTAAATTTTGCGGATCTGCCGTCGA TTGGAGAGGCACAGTTTTCG TTGAGCAAG TATAACACATTCCACCGGAAGGTGAAA CTGCCAACGCCAAAGGCAACGAATTTGCACAACCTCCGACAATAAGCGTCATTGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAG AGTAACGCAGCTGCACTTGTGAGGATTTAATCACACAAAGATGACTAAAGATGGACCACCACCGTACGGGTTCGTGCCGCCACAATCGGCACCACCGAGCTATGCGCAAGCCGTAGGAGGTGTTCCTCCGTCGAGCCCGTTCACACCGCAGCAACCGGTACTGACCGGAGCACAGATCGTTACCACGGTCGTGCCGATCGGGCCCCAGTCGACACACATGATATGCCCCAGTTGCCATGCAGAAGTGAATACTAAGACGACAACATCGCCAGGAATGATTGCCTACGTGTCCGGGTTTCTGATCGCATTGTTCGGATGCTGGTTAGGATGCTGCCTAATACCTTGCTGCATTGACGAATGTATGGATGTACATCATACGTGCCCACACTGTAAAGCATATTTGGGACGGCACAGGCGATAAACCTGCGCGACAGCTA ]
[+] EMBL BM595017 [ ccgGAAAAGAGTGCGTGCGACGTCTGTGTGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGCAAGTTCCTTAAAAGGGGTAAATTTTGCGGATCTGCCGTCGA TTGGAGAGGCACAGTTTTCG TTGAGCAAG TATAACACATTCCACCGGAAGGTGAAA CGGCCAACGCCAAAGGCAACGAATTTGCACAACCTCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAG AGTAACGCAGCTGCACTTGTGAGGATTTAATCACACAAAGATGACTAAAGATGGACCACCACCGTACGGGTTCGTGCCGCCACAATCGGCACCACCGAGCTATGCGCAAGCCGTAGGAGGTGTTCCTCCGTCGAGCCCGTTCACACCGCAGCAACCGGTACTGACCGGAGCACAGATCGTTACCACGGTCGTGCCGATCGGGCCCCAGTCGACACACATGATATGCCCCATTTGCCATGCAGAAGTGAATACTAAGACGACTACATCGCCAGGAATGATTGCCTATGTGTCCGGGTATCTGATCGCATTGTTCGGATGCTGGTTAGGATGCTGCCTAATACCTTGCTGCATTGACGAATGTATGGATGTACATCATACGTGCCCACACTGTAAAGCATATTTGGGACGG ]
[+] EMBL BM578151 [ ccgGAAAAGAGTGCGTGCGACGTCTGTGTGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGCAAGTTCCTTAAAAGGGGTAAATTTTGCGGATCTGCCGTCGA TTGGAGAGGCACAGTTTTCG TTGAGCAAG TATAACACATTCCACCGGAAGGTGAAA CGGCCAACGCCAAAGGCAACGAATTTGCACAACCTCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAG AGTAACGCAGCTGCACTTGTGAGGATTTAATCACACAAAGATGACTAAAGATGGACCACCACCGTACGGGTTCGTGCCGCCACAATCGGCACCACCGAGCTATGCGCAAGCCGTAGGAGGTGTTCCTCCGTCGAGCCCGTTCACACCGCAGCAACCGGTACTGACCGGAGCACAGATCGTTACCACGGTCGTGCCGATCGGGCCCCAGTCGACACACATGATATGCCCCAGTTGCCATGCAGAAGTGAATACTAAGACGACAACATCGCCAGGAATGATTGCCTATGTGTCCGGGTTTCTGATCGCATTGTTCGGATGCTGGTTAGGATGCTGCCTAATACCTTGCTGCATTGACGAATGTATGGATGTACATCATACGTGCCCACACTG ]
[+] EMBL BX607823 [ AGTTCCTTAAAAGGGGTAAATTTTGCGGATCTGCCGTCGA TTGGAGAGGCACAGTTTTCG TGGAGCAAG TATAACAAATTCCACCGGAAGGTGAAA CGGCCAACGCCAAAGGCAACGAATTTGCACAACCTCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAG AGTAACGCAGCTGCACTTGTGAGGATTTAATCACACAAAGATGACTAAAGATGGACCACCACCGTACGGGTTCGTGCCGCCACAATCGGCACCACCGAGCTATGCGCAAGCCGTAGGAGGTGTTCCTCCGTCGAGCCCGTTCACACCGCAGCAACCGGTACTGACCGGAGCACAGATCGTTACCACGGTCGTGCCGATCGGGCCCCAGTCGACACACATGATATGCCCCAGTTGCCATGCAGAAGTGAATACTAAGACGACAACATCGCCAGGAATGATTGCCTATGTGTCCGGGTTTCTGATCGCATTGTTCGGATGCTGGTTAGGATGCTGCCTAATACCTTGCTGCATTGACGAATGTATGGATGTACATCATACGTGCCCACACTGTAAAGCATATTTGGGACGGCACAGGCGATAAACCTGCGCGACAGCTATAACAGAACTTACCCCGTCTGTGTGGGTGTGTAACAGATGGTCTGATAATTGTTTGGCCTATGATAGTAAAACACATTTTTTGGCTAACTTTTGTTTTCTCTATGC ]
[+] EMBL AGA281933 [ CATTCCACCGGAAGGTGAAA CGGCCAACGCCAAAGGCAACGAATTTGCACAACCTCCGACAATAAGCGTCATTGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAG AGTAACGCAGCTGCACTTGTGAGGATTTAATCACACAAAGATGACTAAAGATGGACCACCACCGTACGGGTTCGTGCCGCCACAATCGGCACCACCGAGCTATGCGCAAGCCGTAGGAGGTGTTCCTCCGTCGAACCCGTTCACACCGCAGCAACCGGTACTGACCGGAGCACAGATCGTTACCACGGTCGTGCCGA ]
[-] EMBL CNS09DSD [ CCAGGAATGATTGCCTATGTGTCCGGGTTTCTGATCGCATTGTTCGGATGCTGGTTAGGATGCTGCCTAATACCTTGCTGCATTGACGAATGTATGGATGTACATCATACGTGCCCACACTGTAAAGCATATTTGGGACGGAACAGGCGATAAACCTGCGCGACAGCTATAACAGAACTTACCCCGTCTGTGTGGGTGTGTAACAGATGGTCTGATAATTGTTTGGCCTATGATAGTAAAACACATTTTTTGGCTAACTTTTGTTTTCTCTATGCAAAATATATCGATTCAAGATATACCAATTAAAGTGATTTTATTTTGGCCATTGGTTCTCACTGATTTGTGACCCAACAACTCTTTGTTTTTGGTCCAATGTGGGCTCGCATAGAGCTTTCTCACATCCAAATATTTGTGAACGATATAAGCAAAATATTATTTTGATATCTTTCTGGATCAACTTCACTTAACGGTTGTTTTTCATTAATTTGTGGATTTTTTATGTTTTCGTCGGTATCTTCTAGTAGTACTATCTATGCGATAGGCCGAACAATAATCAGCCCACCTGTTAGTTCAATCCATCGATAAATGTCGAAGGACATTGCACTGCCCAGACGGAAGTAAACAATGAGCGAACGAAGAGAAATTGTATCGTATGTGTGTGTGCTTAACAATTCCAAATCCAATATGCTTCAAAGGAGACTATCGACTACTTGTGTTCTTGAAACTTGAGCTACTCTATCATCACTACCCAGTACTACGTGCATGACGAATTAGCACCGATCTTCAGTGTTAGGGCAAATGTAGGGCTAATTGGGGCGTCGAATTGATTTTAGCAGCGGGCGGTGAAATTACATAAACGCGATAAAGTCCAAAGATCAAAAAAAAAAAAAAAA]
[-] EMBL AGA280237 [ TTCTCACTGATTTGTGACCCAACAACTCTTTGTTTTTGGTCCAATGTGAGCTCGCATAGAACTTTCTCATATCCAAATATTTGTGAACGATATAAGCAAAATATTATTGTGATATCTTTCTGGATCAACTTCACTTAACGGTTGTTTTTCATTAATTTGTGGATTTTTTATGTTTTCGTCGGTATCTTCTAGTAGTACTATCTATGTGATA CCGAcgaaa ]
consensusID : consensus_9415#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 800 fasta sequence
[TTGCACTGCCCAGACGGAAGTAAACAATGAACGAACGAAGAGAAATTGTATCGTATGTGTGTGTGCTTAACAATTCCAAATCCAATATGCTTCAAAGGAGACTATCGACTACTTGTGTTCTTGAAACTTGAGCTACTCTATCATCATTACCCAGTACTACGTGCATGACGAAATAGCACCGATCTTCAGTGTTAGGGCAAATGTAGGGCTAATTGGGGCGTCGAATTGATTTTAGCAGCGGGCGGTGAAATTACATAAACGCGATAAAGTCCAAAAATCAAAATTTTATCGATGCACTTCGAATTCTCACATTAATAATATGTGTGTGTGTAACGAAAAGCTTAGAATGTGGTTAACATTAGCATTGTATGCATACTAAATTCTTCGTTATTATTCATAATTATTACTACCGTTATCATTAATTATTATGCACGACTTAACTTTACTGTAGTTCTCCACTTTTTGTTAATGCTTCCGTTAGATTCAAACGACAAAAAAGCGTTACAAATCGTGTAAGTGGTTTGGTAAATGGTTATATTGTTTACAGTTATCTTTCTGCTTTGTACCGGGGAGTAATTGATCGTGTTGCGTGCATCTATTTTCTATATTAACACACAATGTTCGGAAACAAGAGTTGGTTTATGCTCTCGCCAAGGGTATGTGCCATGAGCGTTGGCCATCGTTTTGATTGCGAGGATGATATTTTACGAAGGATTGCTTTAATGGTGATCTGAGTTGAANCCTCCCGTATACATTTTATAAAACGCTAGGTCAAATTCATCTAATAAATAAACCGAAAT]
[+] EMBL BX623777 [TTGCACTGCCCAGACGGAAGTAAACAATGAACGAACGAAGAGAAATTGTATCGTATGTGTGTGTGCTTAACAATTCCAAATCCAATATGCTTCAAAGGAGACTATCGACTACTTGTGTTCTTGAAACTTGAGCTACTCTATCATCATTACCCAGTACTACGTGCATGACGAAATAGCACCGATCTTCAGTGTTAGGGCAAATGTAGGGCTAATTGGGGCGTCGAATTGATTTTAGCAGCGGGCGGTGAAATTACATAAACGCGATAAAGTCCAAAAATCAAAATTTTATCGATGCACTTCGAATTCTCACATTAATAATATGTGTGTGTGTAACGAAAAGCTTAGAATGTGGTTAACATTAGCATTGTATGCATACTAAATTCTTCGTTATTATTCATAATTATTACTACCGTTATCATTAATTATTATGCACGACTTAACTTTACTGTAGTTCTCCACTTTTTGTTAATGCTTCCGTTAGATTCAAACGACAAAAAAGCGTTACAAATCGTGTAAGTGGTTTGGTAAATGGTTATATTGTTTACAGTTATCTTTCTGCTTTGTACCGGGGAGTAATTGATCGTGTTGCGTGCATCTATTTTCTATATTAACACACAATGTTCGGAAACAAGAGTTGGTTTATGCTCTCGCCAAGGGTATGTGCCATGAGCGTTGGCCATCGTTTTGATTGCGAGGATGATATTTTACGAAGGATTGCTTTAATGGTGATCTGAGTTGAANCCTCCCGTATACATTTTATAAAACGCTAGGTCAAATTCATCTAATAAATAAACCGAAAT]
[+] EMBL BX616471 [ GAAGTAAACAATGAACGAACGAAGAGAAATTGTATCGTATGTGTGTGTGCTTAACAATTCCAAATCCAATATGCTTCAAAGGAGACTATCGACTACTTGTGTTCTTGAAACTTGAGCTACTCTATCATCACTACCCAGTACTACGTGCATGACGAATTAG ACCGATCTTCAGTGTTAGGGCAAATGTAGGGCTAATTGGGGCGTCGAATTGATTTTAGCAGCGGGCGGTGAAATTACATAAACGCGATAAAGTCCAAAAATCAAAATTTTATCGATGCACTTCGAATTCTCACATTAATAATATGTGTGTGTGTAACGAAAAGCTTAGAATGTGGTTAACATTAGCATTGTATGCATA ]
consensusID : consensus_9415#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 608 fasta sequence
[CCGCCCACGCGTCCGGAAAGAGTGCGTGCGACGTCTGTGTGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGCAAGTTCCTTAAAAGGGGTAAATTTTGCGGATCTGCCGTCGATTGGAGAGGCACAGTTTTCGTTGAGCAAGTATAACACATTCCACCGGAAGGTGAAACGGCCAACGTCAAAGGCAACGAATTTGCACAACCTCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAGAGTAACGCAGCTGCACTTGTGAGGATTTAATCACACAAAGATGACTAAAGATGGACCACCACCGTACGGGTTCATGCCGCCACAATCGGCACCACCGAGCTATGCGCAAGCCGTAGGAGGTGTTCCTCCGTCGAGCCCGTTCACACCGCAGCAACCGGTACTGACCGGAGCACAGATCGTTACCACGGTCGTGCCGATCGGGCCCCAGTCGACACACATGATATGCCCCAGTTGCCATGCAGAAGTGAATACTAAGACGACAACATCGCCAGGAAATGATTGCCTATGTGTCCGGGTTTCTGATCGCATTGTTCGGATGCTGGTTAGGATGC]
[+] EMBL BM587260 [CCGCCCACGCGTCCGGAAAGAGTGCGTGCGACGTCTGTGTGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGCAAGTTCCTTAAAAGGGGTAAATTTTGCGGATCTGCCGTCGATTGGAGAGGCACAGTTTTCGTTGAGCAAGTATAACACATTCCACCGGAAGGTGAAACGGCCAACGTCAAAGGCAACGAATTTGCACAACCTCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAGAGTAACGCAGCTGCACTTGTGAGGATTTAATCACACAAAGATGACTAAAGATGGACCACCACCGTACGGGTTCATGCCGCCACAATCGGCACCACCGAGCTATGCGCAAGCCGTAGGAGGTGTTCCTCCGTCGAGCCCGTTCACACCGCAGCAACCGGTACTGACCGGAGCACAGATCGTTACCACGGTCGTGCCGATCGGGCCCCAGTCGACACACATGATATGCCCCAGTTGCCATGCAGAAGTGAATACTAAGACGACAACATCGCCAGGAAATGATTGCCTATGTGTCCGGGTTTCTGATCGCATTGTTCGGATGCTGGTTAGGATGC]
consensusID : consensus_9415#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 516 fasta sequence
[ATGGCTCAGGCAGAATCGCCNGCAGGGTTAACATCGAAAAGAGTGCGTGCGACGTCTGTGTGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGCAAGTTCCTTAAAAGGGGTAAATTTTGCGGATCTGCCGTCGATTGGAGAGGCACAGTTTTCGTTGAGCAAGTATAACACATTCCACCGGAAGGTGAAACGGCAACGCCAAAGGCAACGAATTTGCACAACTCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAGAGTAACGCAGCTGCACTTGTGAGGATTTTAATCACACAAAGCATGACTAAAGATGGACCACACGTACGGGTTCGTGCCGCACAATCGGCGACACCGAGCTATGCGCAAGCCGTAAGGANGGTGTTCCTCCGTCGAGCCCCGTTCAACCGCAGAAACCGGTACTGACCGGGAGCACAGNATCGTTAACACAGGTACGTGCCCGATCGGGCCCCCAAGTCGAC]
[+] EMBL AL697252 [ATGGCTCAGGCAGAATCGCCNGCAGGGTTAACATCGAAAAGAGTGCGTGCGACGTCTGTGTGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGCAAGTTCCTTAAAAGGGGTAAATTTTGCGGATCTGCCGTCGATTGGAGAGGCACAGTTTTCGTTGAGCAAGTATAACACATTCCACCGGAAGGTGAAACGGCAACGCCAAAGGCAACGAATTTGCACAACTCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCCAAGCTGCCACCGAACGCAGAGAGTAACGCAGCTGCACTTGTGAGGATTTTAATCACACAAAGCATGACTAAAGATGGACCACACGTACGGGTTCGTGCCGCACAATCGGCGACACCGAGCTATGCGCAAGCCGTAAGGANGGTGTTCCTCCGTCGAGCCCCGTTCAACCGCAGAAACCGGTACTGACCGGGAGCACAGNATCGTTAACACAGGTACGTGCCCGATCGGGCCCCCAAGTCGAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9415#2 ------------------------------------------------------------
consensus_9415#3 -------------------------------------------------------ATGGC 5
consensus_9415#0 -----------------------------CGCCCGAGGTTTAATACATGCTACGATTGAG 31
consensus_9415#1 TTGCACTGCCCAGACGGAAGTAAACAATGAACGAACGAAGAGAAATTGTATCGTATGTGT 60
consensus_9415#2 -------------CCGCCCACGCG------TCCGGAA-AGAGTGCGTGCGACGTCTGTG- 39
consensus_9415#3 TCAGGCAGA---ATCGCCNGCAGGGTTAACATCGAAA-AGAGTGCGTGCGACGTCTGTG- 60
consensus_9415#0 TCATATAGACACACCACCAGTGAAGGAAGCATCGAAA-AGAGTGCGTGCGACGTCTGTG- 89
consensus_9415#1 GTGTGCTTAACAATTCCAAATCCAATATGCTTCAAAGGAGACTATCGACTACTTGTGTTC 120
* * * *** * * ** * ***
consensus_9415#2 -TGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGCAAGTTCCTTAAAAGGGGTAAATTTT 98
consensus_9415#3 -TGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGCAAGTTCCTTAAAAGGGGTAAATTTT 119
consensus_9415#0 -TGTTGCCTCGGCTGCTGTGTGTTTTTATTAGCGCAAGTTCCTTAAAAGGGGTAAATTTT 148
consensus_9415#1 TTGAAACTTGAGCTACTCTA--TCATCATTACCCAGTACTACGTGCATGACG-AAATAGC 177
** * * *** ** * * * **** * * * * * * * ****
consensus_9415#2 GCGGATCTGCCGTCGATTGGAGAGGCACAGTTTTCGTTGAGCAAGTATAACACATTC--- 155
consensus_9415#3 GCGGATCTGCCGTCGATTGGAGAGGCACAGTTTTCGTTGAGCAAGTATAACACATTC--- 176
consensus_9415#0 GCGGATCTGCCGTCGATTGGAGAGGCACAGTTTTCGTTGAGCAAGTATAACACATTC--- 205
consensus_9415#1 ACCGATCTTCAGT-GTTAGGGCAAATGTAGGGCTAATTGGG-GCGTCGAATTGATTTTAG 235
* ***** * ** * * ** * ** * *** * ** ** ***
consensus_9415#2 CACCGGAAGGTGAAACGGCC--AACGT--CAAAGGCAACGAATT-------------TGC 198
consensus_9415#3 CACCGGAAGGTGAAACGGC---AACGC--CAAAGGCAACGAATT-------------TGC 218
consensus_9415#0 CACCGGAAGGTGAAACGGCC--AACGC--CAAAGGCAACGAATT-------------TGC 248
consensus_9415#1 CAGCGGGCGGTGAAATTACATAAACGCGATAAAGTCCAAAAATCAAAATTTTATCGATGC 295
** *** ******* * **** **** * * *** ***
consensus_9415#2 AC---AACCTCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCC 255
consensus_9415#3 AC---AAC-TCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCC 274
consensus_9415#0 AC---AACCTCCGACAATAAGCGTCATCGAGTGCGAAACACACCAGTCTGAGGATCGCCC 305
consensus_9415#1 ACTTCGAATTCTCACATTAATAATATGTGTGTGTGTAACGAAAAGCTTAGAATGTGGTTA 355
** * ** *** *** * * *** * *** * * ** * *
consensus_9415#2 AAGCTGCCACCGAACGCAGA--GAGTAACGCAGCTGCACTTGTGAGGATTT-AATCA--- 309
consensus_9415#3 AAGCTGCCACCGAACGCAGA--GAGTAACGCAGCTGCACTTGTGAGGATTTTAATCA--- 329
consensus_9415#0 AAGCTGCCACCGAACGCAGA--GAGTAACGCAGCTGCACTTGTGAGGATTT-AATCA--- 359
consensus_9415#1 ACATTAGCATTGTATGCATACTAAATTCTTCGTTATTATTCATAATTATTACTACCGTTA 415
* * ** * * *** * * * * * * * * *** * *
consensus_9415#2 -CACAAAG-ATGACTAAAGATGGACCACCACCGTA-----CGGGTTCATGCCGCCACAAT 362
consensus_9415#3 -CACAAAGCATGACTAAAGATGGACCACA--CGTA-----CGGGTTCGTGCCGC-ACAAT 380
consensus_9415#0 -CACAAAG-ATGACTAAAGATGGACCACCACCGTA-----CGGGTTCGTGCCGCCACAAT 412
consensus_9415#1 TCATTAATTATTATGCACGACTTAACTTTACTGTAGTTCTCCACTTTTTGTTAATGCTTC 475
** ** ** * * ** * * *** * ** ** *
consensus_9415#2 CGGCACCACCGAGCTATGCGCAAGCCGTAGG--AGGTGT---TCCTCCGTCGAGC--CCG 415
consensus_9415#3 CGGCGACACCGAGCTATGCGCAAGCCGTAAGGANGGTGT---TCCTCCGTCGAGC--CCC 435
consensus_9415#0 CGGCACCACCGAGCTATGCGCAAGCCGTAGG--AGGTGT---TCCTCCGTCGAGC--CCG 465
consensus_9415#1 CGTTAGATTCAAACGACAAAAAAGCGTTACAAATCGTGTAAGTGGTTTGGTAAATGGTTA 535
** * * * * **** ** **** * * * *
consensus_9415#2 TTCACACCGCAGCAACCGGTACTGACCGG-AGCACAGA-TCGTTACCACGGTCGTG---C 470
consensus_9415#3 GTTCAACCGCAGAAACCGGTACTGACCGGGAGCACAGNATCGTTAACACAGGTACGTGCC 495
consensus_9415#0 TTCACACCGCAGCAACCGGTACTGACCGG-AGCACAGA-TCGTTACCACGGTCGTG---C 520
consensus_9415#1 TATTGTTTACAGTTATCT-TTCTGCTTTGTACCGGGGAGTAATTGATCGTGTTGCG---T 591
*** * * * *** * * * * * ** * *
consensus_9415#2 CGATCGGGCCCC--AGTCGACACACATGATATGCCCCAGTTGCCATGCAGAAGTGAATAC 528
consensus_9415#3 CGATCGGGCCCCCAAGTCGAC--------------------------------------- 516
consensus_9415#0 CGATCGGGCCCC--AGTCGACACACATGATATGCCCCAGTTGCCATGCAGAAGTGAATAC 578
consensus_9415#1 GCATCTATTTTCTATATTAACACACAATGT-----TCGGAAACAAGAGTTGGTTTATGCT 646
*** * * **
consensus_9415#2 TAAGACGACAACATCGCCAGGAAATGATTGCCTATGTGTCCGGGTTTCTGATCGCATTGT 588
consensus_9415#3 ------------------------------------------------------------
consensus_9415#0 TAAGACGACAACATCGCCAGGAA-TGATTGCCTATGTGTCCGGGTTTCTGATCGCATTGT 637
consensus_9415#1 CTCGCCAAGGGTATGTGCCATGAGCGTTGGCCATCGTTTTGATTGCGAGGATGATATTTT 706
consensus_9415#2 TCGGATGCTGGTTAGGATGC---------------------------------------- 608
consensus_9415#3 ------------------------------------------------------------
consensus_9415#0 TCGGATGCTGGTTAGGATGCTGCCTAATACCTTGCTGCATTGACGAATGTATGGATGTAC 697
consensus_9415#1 ACGAAGGATTGCTTTAATGGTGATCTGAGTTGAANCCTCCCGTATACATTTTATAAAACG 766
consensus_9415#2 ------------------------------------------------------------
consensus_9415#3 ------------------------------------------------------------
consensus_9415#0 ATCATACGTGCCCACACTGTAAAGCATATTTGGGACGGCACAGGCGATAAACCTGCGCGA 757
consensus_9415#1 CTAGGTCAAATTCATCTAATAAATAAACCGAAAT-------------------------- 800
consensus_9415#2 ------------------------------------------------------------
consensus_9415#3 ------------------------------------------------------------
consensus_9415#0 CAGCTATAACAGAACTTACCCCGTCTGTGTGGGTGTGTAACAGATGGTCTGATAATTGTT 817
consensus_9415#1 ------------------------------------------------------------
consensus_9415#2 ------------------------------------------------------------
consensus_9415#3 ------------------------------------------------------------
consensus_9415#0 TGGCCTATGATAGTAAAACACATTTTTTGGCTAACTTTTGTTTTCTCTATGCAAAATATA 877
consensus_9415#1 ------------------------------------------------------------
consensus_9415#2 ------------------------------------------------------------
consensus_9415#3 ------------------------------------------------------------
consensus_9415#0 TCGATTCAAGATATACCAATTAAAGTGATTTTATTTTGGCCATTGGTTCTCACTGATTTG 937
consensus_9415#1 ------------------------------------------------------------
consensus_9415#2 ------------------------------------------------------------
consensus_9415#3 ------------------------------------------------------------
consensus_9415#0 TGACCCAACAACTCTTTGTTTTTGGTCCAATGTGAGCTCGCATAGAGCTTTCTCACATCC 997
consensus_9415#1 ------------------------------------------------------------
consensus_9415#2 ------------------------------------------------------------
consensus_9415#3 ------------------------------------------------------------
consensus_9415#0 AAATATTTGTGAACGATATAAGCAAAATATTATTTTGATATCTTTCTGGATCAACTTCAC 1057
consensus_9415#1 ------------------------------------------------------------
consensus_9415#2 ------------------------------------------------------------
consensus_9415#3 ------------------------------------------------------------
consensus_9415#0 TTAACGGTTGTTTTTCATTAATTTGTGGATTTTTTATGTTTTCGTCGGTATCTTCTAGTA 1117
consensus_9415#1 ------------------------------------------------------------
consensus_9415#2 ------------------------------------------------------------
consensus_9415#3 ------------------------------------------------------------
consensus_9415#0 GTACTATCTATGCGATAGGCCGAACAATAATCAGCCCACCTGTTAGTTCAATCCATCGAT 1177
consensus_9415#1 ------------------------------------------------------------
consensus_9415#2 ------------------------------------------------------------
consensus_9415#3 ------------------------------------------------------------
consensus_9415#0 AAATGTCGAAGGACATTGCACTGCCCAGACGGAAGTAAACAATGAGCGAACGAAGAGAAA 1237
consensus_9415#1 ------------------------------------------------------------
consensus_9415#2 ------------------------------------------------------------
consensus_9415#3 ------------------------------------------------------------
consensus_9415#0 TTGTATCGTATGTGTGTGTGCTTAACAATTCCAAATCCAATATGCTTCAAAGGAGACTAT 1297
consensus_9415#1 ------------------------------------------------------------
consensus_9415#2 ------------------------------------------------------------
consensus_9415#3 ------------------------------------------------------------
consensus_9415#0 CGACTACTTGTGTTCTTGAAACTTGAGCTACTCTATCATCACTACCCAGTACTACGTGCA 1357
consensus_9415#1 ------------------------------------------------------------
consensus_9415#2 ------------------------------------------------------------
consensus_9415#3 ------------------------------------------------------------
consensus_9415#0 TGACGAATTAGCACCGATCTTCAGTGTTAGGGCAAATGTAGGGCTAATTGGGGCGTCGAA 1417
consensus_9415#1 ------------------------------------------------------------
consensus_9415#2 ------------------------------------------------------------
consensus_9415#3 ------------------------------------------------------------
consensus_9415#0 TTGATTTTAGCAGCGGGCGGTGAAATTACATAAACGCGATAAAGTCCAAAGATCAAAAAA 1477
consensus_9415#1 ------------------------------------------------------------
consensus_9415#2 ----------
consensus_9415#3 ----------
consensus_9415#0 AAAAAAAAAA 1487
consensus_9415#1 ----------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||