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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9445#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1038 fasta sequence
[GGATGACAGTTCGCTCAGGGCATGAACATTGTTTAGCGTCCTTTCTGGCGGAGGGAAATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAGCAGCGAAAATGGACATCCGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCACTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAA-CTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAGCTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAACGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCAAGGAGGTGC-GGCTGGTGCCGAACCGGCACG-ACATTGCGTTCGTAGAGTTTGCGACGGAACTGCAGAGCGGAG-G-G-C-CCGGG-AAGCGCTGCAAGGGTTCAAGATTACGCCGACGCACGCGATGAAGATTTCGTTTGCGAAGAAGTAGAGGGAGGAGGCGATGGTATCCGTCGTTACACAAGGATATGCTGCCGCTTTTACACTGGACGGAGATCGAGT-GGAGTCATTCGGTTGTCGAGGCAGCCACAGGTAAATTTTGAAGCTG-----TAACTTTGAACTCAATTGAACTGAAACCAATAAACCATGCATTAAGCATTGCACTTCCGCTATCATGGTATTGTCGGTTAGGTGATTGCTTAGTATTTAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CNS093ZD [GGATGACAGTTCGCTCAGGGCATGAACATTGTTTAGCGTCCTTTCTGGCGGAGGGAAATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAGCAGCGAAAATGGACATCCGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCACTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAA CTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAGCTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAACGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCAAGGAGGTGC GGCTGGTGCCGAACCGGCACG ACATTGCGTTCGTAGAGTTTGCGACGGAACTGCAGAGCGGAG G A CTCCGGG AAGCGCTGCAAGGGTTCAAGATTACGCCGACGCACGCGATGAAGATTTCGTTTGCGAAGAAGTAAAG GGAGGCGATGGCATCCGTCGTTACCCAAGGATATGCTGCCGCTTTTACACTGGACGGAGATCGAGT GGGGTCATTCGGTTGTCGAGGCAGCCACAGGTAAATTTTGAAGCTGTACGATAATTTTGAACTCAATTGAACTGAAACCAATAAACCATGCATTAAGCATTGCACTTCCGCTATCATGGTATTGTCGGTTAGGTGATTG ]
[+] EMBL CNS09FG4 [ CTCAGGGCATGAACATTGTTTAGCGTCCTTTCTGGCGGAGGGAAATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAGCAGCGAAAATGGACATCCGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCACTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAA GTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTTAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAGCTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAACGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCAAGGAGGTGC GGCTGGTGCCGAACCGGCACG ACATTGCGTTCGTAGAGTTTGCGACGGAACTGCAGAGCGGAG GCG C CCGGG AAGCGCTGCAAGGGTTCAAGATTACGCCGACGCACGCGATGAAGATTTCGTTTGCGAAGAAGTAAAG GGAGGCGATGGCATCCGTCGTTACCCAAGGATATGCTGCCGCTTTTACACTGGACGGAGATCGAGT GGGGTCATTCGGTTGTCGAGGCAGCCACAGGTAAATTTTGAAGCTGTACGATAATTTTGAACTCAATTGAACTGAAACCAATAAACCATGCATTAAGCATTGCACTTCCGCTATCATGGTATTGTCGGTTAGGTGA ]
[+] EMBL CNS09MUJ [ GGCATGAACATTGTTTAGCGTCCTTTCTGGCGGAGGGAAATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAGCAGCGAAAATGGACATCCGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCACTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAA CTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAGCTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAACGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCAAGGAGGTGC GGCTGGTGCCGAACCGGCACG ACATTGCGTTCGTAGAGTTTGCGACGGAACTGCAGAGCGGAG G G CGCCGGG AAGCGCTGCAAGGGTTCAAGATTACGCCGACGCACGCGATGAAGATTTCGTTTGCGGAGAAGTAAAG GGAGGCGATGGCATCCGTCGTTACCCAAGGATATGCTGCCGCTTTTACACTGGACGGAGATCGAGTGGGGGTCATTCGGTTGTCGAGGCAGCCACAGGTAAATTTTGAAGCTGTACGATAATTTTGAACTCAATTGAACTGAAACCAATAAACCATGCATTAAaaaaa ]
[+] EMBL CNS093X2 [ ATGAACATTGTTTAGCGTCCTTTCTGGCGGAGGGAAATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAGCAGCGAAAATGGACATCCGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCACTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAA CTGAAGGGCACGTTCCAG ]
[+] EMBL CNS099K9 [ tCTTTCTGGCGGAGGGAAATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAACAGCGAAAATGGACATCAGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCGCTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAA CTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAGCTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAACGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCAAGGAGGTGC GGCTGGTGCCGAACCGGCACG ACATTGCGTTCGTAGAGTTTGCGACGGAACTGCAGAGCGGAG G GCC CCGGG AAGCGCTGCAAGGGTTCAAGATTACGCCGACGCACGCGATGAAGATTTCGTTTGCGAAGAAGTAGAGGGAGGAGGCGATGGTATCCGTCGTTACACAAGGATATGCTGCCGCTTTTACACTGGACGGAGATCGAGT GGAGTCATTCGGTTGTCGGGGCAGCCACAGGTAAATTTTGAAGCTG TAACTTTGAACTCAATTGAACTGAAACCAATAAACCATGCATTAAGCATTGCAC ]
[+] EMBL CNS097P3 [ TCTGGCGGAGGG AATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAACAGCGAAAATGGACATCAGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCGCTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAA GTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAGCTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAACGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCAAGGAGGTGC GGCTGGTGCCGAACCGGCACGAACATTGCGTTCGTAGAGTTTGCGACGGAACTGCAGAGCGGAG GAC C CCGGG AAGCGCTGCAAGGGTTCAAGATTACGCCGACGCACGCGATGAAGATTTCGTTTGCGAAGAAGTAGAGGGAGGAGGCGATGGTATCCGTCGTTACACAAGGATATGCTGCCGCTTTTACACTGGACGGAGATCGAGT GGAGTCATTCGGTTGTCGAGGCAGCCACAGGTAAATTTTGAAGCTG TAACTTTGAACTCAATTGAACTGAAACCAATAAACCATGCATTAAGC ]
[+] EMBL CNS098P6 [ CGGAGGGAAATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAACAGCGAAAATGGACATCAGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCGCTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAA CTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAGCTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAACGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCAAGGAGGTGC GGCTGGTGCCGAACCGGCACG ACATTGCGTTCGTAGAGTTTGCGACGGAACTGCAGAGCGGAG G G C CCGGG AAGCGCTGCAAGGGTTCAAGATTACGCCGACGCACGCGATGAAGATTTCGTTTGCGAAGAAGTAGAGGGAGGAGGCGATGGTATCCGTCGTTACACAAGGATATGCTGCCGCTTTTACACTGGACGGAGATCGAGT GGAGTCATTCGGTTGTCGAGGCAGCCACAGGTAAATTTTGAAGCTG TAACTTTGAACTCAATTGAACTGAAACCAATAAACCATGCATTAAGCATTGCACTTCCGCTATCAT ]
[-] EMBL CNS093ZE [ AAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAGCAGCGAAAATGGACATCCGACCCAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCACTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAAACGCTCAAAATGCGGGGCCAGGCGTTTTTCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAAAACTCCAAAACCGACAGCGACATGATAGCGAAGCTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAGCTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAACGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCAAGGAGGTGC GGCTGG GCCGAACCGGCACG ACATTGCGTTCGTAGAGTTTGCGACGGAACTGCAGAGCGGAGCG G C CCGGG AAGCGCTGCAAGGGTTCAAGATTACGCCCACGCACGCGATGAAGATTTCGTTTGCGAAGAAGTAAAG GGAGGCGATGGCATCCGTCGTTACCCAAGGATATGCTGCCGCTTTTACACTGGACGGAGATCGAGT GGGGTCATTCGGTTGTCGAGGCAGCCACAGGTAAATTTTGAAGCTGTACGATAATTTTGAACTCAATTGAACTGAAACCAATAAACCATGCATTAAGCATTGCACTTCCGCTATCATGGTATTGTCGGTTAGGTGATTGCTTAGTATTTAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BX621803 [ AATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAGCAGCGAAAATGGACATCCGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCACTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAAGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAAGCTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAGCTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAACGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCAAGGAGGTGC GGCTGGTGCCGAACCGGCACG ACATTGCGTTCGTGGAGTTTGCGACGGAACTGCAGAGCGGGGCG G C CCGGGAAAGCGCTGCAAGGGTTCAAGATTACGCCGACGCACGCGATGAAG ]
[-] EMBL CNS097P4 [ ACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAACAGCGAAAATGGACATCAGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCGCTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAAACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGTTCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAAGCTTAAGGGCACGTTCCAGGAGCGGCCAAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAGCTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAACGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCAAGGAGGTGC GGCT GTGCCGAACCGGCACG ACATTGCGTTCGTAGAGTTTGCGACGGGACTGCAGAGCGGAGCG G C CCGGG AAGCGCTGCAAGGGTTCAAGATTACGCCTACGCACGCGATGAAGATTTCGTTTGCGAAGAAGTAGAGGGAGGAGGCGATGGTATCCGTCGTTACACAAGGATATGCTGCCGCTTTTACACTGGACGGAGATCGAGT GGAGTCATTCGGTTGTCGAGGCAGCCACAGGTAAATTTTGAAGCTG TAACTTTGAACTCAATTGAACTGAAACCAATAAACCATGCATTAAGCATTGCACTTCCGCTATCAT GTATTGTC GTTAGGg ]
[-] EMBL CNS098P7 [ TTTTAGTGCAAAACTAGTGTAGTGTGCGCACAGCGAAAATGGACATCAGACCCAATTACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCGCTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCCACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGTTCTCGAGCGCCACCAATGCGATGCGCACGATGCAA GGTTCCCCTTCTACGACAAGCCCATGCGCATCAAATACTCCAAAACCCACAGCGACATGATAGCGAAGCTGAAGGGCACGTTCCAGGAGCGGCCCAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAGCTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAACGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCAAGGAGGTGC GGCTGGTGCCGAACCGGCACG ACATTGCGTTCGTAGAGTTTGCGACGGGACTGCAGAGCGGAGCG G C CCGGG AAGCGCTGCAAGGGTTCAAGATTACGCCCACGCACGCGATGAAGATTTCGTTTGCGAAGAAGTAGAGGGAGGAGGCGATGGTATCCGTCGTTACACAAGGATATGCTGCCGCTTTTACACTGGACGGAGATCGAGT GGAGTCATTCGGTTGTCGAGGCAGCCACAGGTAAATTTTGAAGCTG TAACTTTGTACTCAATTGAACTGAAACCAATAAACCATGCATTAAGCATTGCACTTCCGCTATCATGGTATTGTCa ]
[-] EMBL CNS099KA [ TCAGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCGCTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGTTCTCGAGCGCCACCAATGCGATGCGCACGATGCAA GGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAAGCTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAGCTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAACGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCAAGGAGGTGC GGCTGGTGCCGAACCGGCACG ACATTGCGTTCGTAGAGTTTGCGACGGAACTGCAGAGCGGAGCG G C CCGGG AAGCGCTGCAAGGGTTCAAGATTACGCCCACGCACGCGATGAAGATTTCGTTTGCGAAGAAGTAGAGGGAGGAGGCGATGGTATCCGTCGTTACACAAGGATATGCTGCCGCTTTTACACTGGACGGAGATCGAGT GGAGTCATTCGGTTGTCGGGGCAGCCACAGGTAAATTTTGAAGCTG TAACTTTGTACTCAATTGAACTGAAACCAATAAACCATGCATTAAGCATTGCACTTCCGCTATCATGGTATTGTCGGTTAGGTGATTGCT ]
[-] EMBL CNS09FG5 [ ATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCAAGGAGGTGCGGGCTGGTGCCGAACCGGCACG ACATTGCGTTCGTAGAGTTTGCGACGGAACTGCAGAGCGGAGCG G C CCGGG AAGCGCTGCAAGGGTTCAAGATTACGCCCACGCACGCGATGAAGATTTCGTTTGCGAAGAAGTAAAG GGAGGCGATGGCATCCGTCGTTACCCAAGGATATGCTGCCGCTTTTACACTGGACGGAGATCGAGT GGGGTCATTCGGTTGTCGAGGCAGCCACAGGTAAATTTTGAAGCTG TAc ]
consensusID : consensus_9445#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 698 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGGTCCTTTCTGGCGGAGGGAAATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAGCAGCGAAAATGGACATCCGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCACTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAAGCTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAACTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAATGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCACGGAGGTGCGGCTGGTGCCGAACCGGCACGACATTGCGTTCGTGGAGTTTGCGAC]
[+] EMBL BM592252 [CCGCCCACGCGTCCGCCCACGCGTCCGGTCCTTTCTGGCGGAGGGAAATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAGCAGCGAAAATGGACATCCGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCACTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAAGCTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAACTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAATGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTCACGGAGGTGCGGCTGGTGCCGAACCGGCACGACATTGCGTTCGTGGAGTTTGCGAC]
consensusID : consensus_9445#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 629 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGCATTGTTTAGCGTCCTTTCTGGCGGAGGGAAATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAGCAGCGAAAATGGACATCCGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCACTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAAGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAAGCTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAGCTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAACGAGATGATGCTGTCGATG]
[+] EMBL BM589291 [CCGCCCACGCGTCCGCCCACGCGTCCGCATTGTTTAGCGTCCTTTCTGGCGGAGGGAAATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAGCAGCGAAAATGGACATCCGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCACTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAAGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAAGCTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGAAGGCGAAGAAGCTGAAGAATGCGGGCGAGGTGGGTGCGACAAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAACCTGCCGGAGGAAACGAACGAGATGATGCTGTCGATG]
consensusID : consensus_9445#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 555 fasta sequence
[GGCAGAATCCGGCACNGAGGGGCATGAACATTGTTTAGCGTCCTTTCTGGCGGAGGGAAATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAACAGCGAAAATGGACATCAGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCGCTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAAGCTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGACAGGCGAAGGAAGCTGAAAGAATGCGGGCGAGGTGGGGTGCGACGNAACAAGTTCG]
[+] EMBL BX468347 [GGCAGAATCCGGCACNGAGGGGCATGAACATTGTTTAGCGTCCTTTCTGGCGGAGGGAAATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGTGCAAAACTAGTGTAGTGTGCGAACAGCGAAAATGGACATCAGACCGAATCACACCATCTACATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCGCTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGGCCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCAAGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACATGATAGCGAAGCTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACCCATCCAGACGGAGGATAAGACAGGCGAAGGAAGCTGAAAGAATGCGGGCGAGGTGGGGTGCGACGNAACAAGTTCG]
[+] EMBL BX615123 [ AAACTAGTGTAGTGTGCGAACAGCGAAAATGGACATCAGACCGAATCACACCATCTATATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCGCTCTACGCCATCTTCTCCCAGTTCGGCCAGATACTCca ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9445#1 CCGCCCACGCGTCCGCCCACG--CGTCCG-----------GTCCTTTCTGGCGGAGGGAA 47
consensus_9445#2 CCGCCCACGCGTCCGCCCACG--CGTCCGCATTGTTTAGCGTCCTTTCTGGCGGAGGGAA 58
consensus_9445#0 -GGATGACA-GTTCGCTCAGGG-CATGAACATTGTTTAGCGTCCTTTCTGGCGGAGGGAA 57
consensus_9445#3 -GGCAGAATCCGGCACNGAGGGGCATGAACATTGTTTAGCGTCCTTTCTGGCGGAGGGAA 59
* * * * * * * * ********************
consensus_9445#1 ATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGT 107
consensus_9445#2 ATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGT 118
consensus_9445#0 ATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGT 117
consensus_9445#3 ATTTTTCACACATTGCCGTAAAATTGAACATAATTTACAGAAAAGCTACTGTATTTTAGT 119
************************************************************
consensus_9445#1 GCAAAACTAGTGTAGTGTGCGAGCAGCGAAAATGGACATCCGACCGAATCACACCATCTA 167
consensus_9445#2 GCAAAACTAGTGTAGTGTGCGAGCAGCGAAAATGGACATCCGACCGAATCACACCATCTA 178
consensus_9445#0 GCAAAACTAGTGTAGTGTGCGAGCAGCGAAAATGGACATCCGACCGAATCACACCATCTA 177
consensus_9445#3 GCAAAACTAGTGTAGTGTGCGAACAGCGAAAATGGACATCAGACCGAATCACACCATCTA 179
********************** ***************** *******************
consensus_9445#1 CATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCACTCTACGCCAT 227
consensus_9445#2 CATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCACTCTACGCCAT 238
consensus_9445#0 CATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCACTCTACGCCAT 237
consensus_9445#3 CATCAACAACCTGAACGAGAAGATCAACAAGGTGGAGTTGAAAAAGTCGCTCTACGCCAT 239
************************************************ ***********
consensus_9445#1 CTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGG 287
consensus_9445#2 CTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGG 298
consensus_9445#0 CTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGG 297
consensus_9445#3 CTTCTCCCAGTTCGGCCAGATACTCGACATTGTCGCGTACAAGACGCTCAAAATGCGGGG 299
************************************************************
consensus_9445#1 CCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCA 347
consensus_9445#2 CCAAGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCA 358
consensus_9445#0 CCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCA 357
consensus_9445#3 CCAGGCGTTTATCATCTTCAAGGAGATCTCGAGCGCCACCAATGCGATGCGCACGATGCA 359
*** ********************************************************
consensus_9445#1 AGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACAT 407
consensus_9445#2 AGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACAT 418
consensus_9445#0 AGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACAT 417
consensus_9445#3 AGGGTTCCCCTTCTACGACAAGCCGATGCGCATCAAATACTCCAAAACCGACAGCGACAT 419
************************************************************
consensus_9445#1 GATAGCGAAGCTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACC 467
consensus_9445#2 GATAGCGAAGCTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACC 478
consensus_9445#0 GATAGCGAA-CTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACC 476
consensus_9445#3 GATAGCGAAGCTGAAGGGCACGTTCCAGGAGCGGCCGAAGCGCGTCAAGCAACCGAAACC 479
********* **************************************************
consensus_9445#1 CATCCAGACGGAGGATAAGA-AGGCGAAG-AAACTGAA-GAATGCGGGCGAGGTGGG-TG 523
consensus_9445#2 CATCCAGACGGAGGATAAGA-AGGCGAAG-AAGCTGAA-GAATGCGGGCGAGGTGGG-TG 534
consensus_9445#0 CATCCAGACGGAGGATAAGA-AGGCGAAG-AAGCTGAA-GAATGCGGGCGAGGTGGG-TG 532
consensus_9445#3 CATCCAGACGGAGGATAAGACAGGCGAAGGAAGCTGAAAGAATGCGGGCGAGGTGGGGTG 539
******************** ******** ** ***** ****************** **
consensus_9445#1 CGAC-AAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAAC 582
consensus_9445#2 CGAC-AAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAAC 593
consensus_9445#0 CGAC-AAACAATTCGGCGACGGCCGAGCAGCCGCCCAACCAGATCCTCTTCCTGACCAAC 591
consensus_9445#3 CGACGNAACAAGTTCG-------------------------------------------- 555
**** ***** * *
consensus_9445#1 CTGCCGGAGGAAACGAATGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTC 642
consensus_9445#2 CTGCCGGAGGAAACGAACGAGATGATGCTGTCGATG------------------------ 629
consensus_9445#0 CTGCCGGAGGAAACGAACGAGATGATGCTGTCGATGTTGTTCAACCAGTTCCCGGGCTTC 651
consensus_9445#3 ------------------------------------------------------------
consensus_9445#1 ACGGAGGTGCGGCTGGTGCCGAACCGGCACGACATTGCGTTCGTGGAGTTTGCGAC---- 698
consensus_9445#2 ------------------------------------------------------------
consensus_9445#0 AAGGAGGTGCGGCTGGTGCCGAACCGGCACGACATTGCGTTCGTAGAGTTTGCGACGGAA 711
consensus_9445#3 ------------------------------------------------------------
consensus_9445#1 ------------------------------------------------------------
consensus_9445#2 ------------------------------------------------------------
consensus_9445#0 CTGCAGAGCGGAGGGCCCGGGAAGCGCTGCAAGGGTTCAAGATTACGCCGACGCACGCGA 771
consensus_9445#3 ------------------------------------------------------------
consensus_9445#1 ------------------------------------------------------------
consensus_9445#2 ------------------------------------------------------------
consensus_9445#0 TGAAGATTTCGTTTGCGAAGAAGTAGAGGGAGGAGGCGATGGTATCCGTCGTTACACAAG 831
consensus_9445#3 ------------------------------------------------------------
consensus_9445#1 ------------------------------------------------------------
consensus_9445#2 ------------------------------------------------------------
consensus_9445#0 GATATGCTGCCGCTTTTACACTGGACGGAGATCGAGTGGAGTCATTCGGTTGTCGAGGCA 891
consensus_9445#3 ------------------------------------------------------------
consensus_9445#1 ------------------------------------------------------------
consensus_9445#2 ------------------------------------------------------------
consensus_9445#0 GCCACAGGTAAATTTTGAAGCTGTAACTTTGAACTCAATTGAACTGAAACCAATAAACCA 951
consensus_9445#3 ------------------------------------------------------------
consensus_9445#1 ------------------------------------------------------------
consensus_9445#2 ------------------------------------------------------------
consensus_9445#0 TGCATTAAGCATTGCACTTCCGCTATCATGGTATTGTCGGTTAGGTGATTGCTTAGTATT 1011
consensus_9445#3 ------------------------------------------------------------
consensus_9445#1 ---------------------------
consensus_9445#2 ---------------------------
consensus_9445#0 TAAAAAAAAAAAAAAAAAAAAAAAAAA 1038
consensus_9445#3 ---------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||