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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9471#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1400 fasta sequence
[GCAAGATTCGGCACGNTGGACAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAAAATCATCAAGGAAGCTATCGAGACGACGATCGGAGGTAATGCTTACCAGCATGACAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATCGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATCGTGTCGGTGTTTGGACTTTCCATCTAAAGAAAATCTTTCGACTAAGGGTCATGCACAGGCACGCATTGGCGAGTGAACGAGCAATGATGTCTACTAATTTCCATAAAAAATACCGTCAATTTGGTTGATCTATAGCTGTATGAATGTTTTAAACGTCGTATTTCTTTCCCGCATTCGGTTGCTGCGTATGGGGTTTCTTACAGAATTAGACGCGCGATGCTGTATGAATTTGCGTATCTTGTGCTTCTTTCTGCCGCTGGTGGATTAACTTTTGAATGTTAGAAATCGCCTTAGCCTGTGAGCTGATTTAATTTATTTTTATTCGATAATACTATTACAATTAATAGGAACTATCTGTCCGCTGACAGCATTAAGAATCGTATGGCAGTCTTGTGCCCCTTGTATGAAAGTTTTTCTCACCCTCAGCAGCAGTTATAGTGTAAACATCAGCTATTTTGGAAGAGAAAATTGTAGAAATAACAGGCTCGGCAGCCCACAATGTTGCACTTTTCCCTTTTAATAATCCTTTTGGTAGCCAGTTTTCGATAAAATAGTGTGATATGTCCAATGCAAAAATTAAATTGCAATGTAAGCCATAGCAATTAGGATAGCACAGGGCCCTACCCTCTATATCGTACGAGGCTGTGCAGCTGTCGGAAGGAAGCACTGTGTGGTGGAACGCTCCGAAACATGGAAGAAGAGAACAGTAGCAACTTATTGTGGTAGTACAGCAATTACCGACAATTGCTGTAGCACAATTTAGCAAGAAACGACACACAACAGACACAATTCATCGCGCTGTAAGTGATTGGGCTCCACGTGATGATAGGAAAGCATGGTTGGCAATACAAGTTTTGTAAATTTTCGTGCTCACACAGCGAAACCGGAAGTAAGAAATGGGAGGAAACACTAAGAATTAGGATTATGACAGGTGTACGCTTTACAAAGGAAAAACGCATTGTTTTCGTTGAGTTAACTGATAGAAGACGCGTTGATTAAACAACCATGTGTGAAGGATACACAATAGACGTAGAATATAAGAATTGATA-CACGGAAAAAAAA]
[+] EMBL BX467814 [GCAAGATTCGGCACGNTGGACAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAAAATCATCAAGGAAGCTATCGAGACGACGATCGGAGGTAATGCTTACCAGCATGACAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATCGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATCGTGTCGGTGTTTGGACTTTC ]
[+] EMBL CNS09H5F [ AAG AGAGCA CAATTCGTCGTGGACGATGTGAGCAAAATCATCAAGGAAGCTATCGAGACGACGATCGGAGGTAATGCTTACCAGCATGACAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATCGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATCGTGTCGGTGTTTGGACTTTCCATCTAAAGAAAATCTTTCGACTAAGGGTCATGCACAGGCACGCATTGGCGAGTGAACGAGCAATGATGTCTACTAATTTCCATAAAAAATACCGTCAATTTGGTTGATCTATAGCTGTATGAATGTTTTAAACGTCGTATTTCTTTCCCGCATTCGGTTGCTGCGTATGGGGTTTCTTACAGAATTAGACGCGCGATGCTGTATGAATTTGCGTATCTTGTGCTTCTTTCTGCCGCTGGTGGATTAACTTTTGAATGTTAGAAATCGCCTTAGCCTGTGAGCTGATTTAATTTATTTTTATTCGATAATACTATTACAATTAATAGGAACTATCTGTCCGCTGACAGCATTAAGAATCGTATGGCAGTCTTGTGCCCCTTGTATGAAAGTTTTTCTCACCCTC ]
[+] EMBL AGA284767 [ AAGAAGAGCACCAATTCGTCGCGGACGATGTGAGCAAAATCATCAAGGAAGCTATCGAGACGACGATCGGAGGTAATGCTTACCAGCATGATAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATCGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATCGTGTCGGTGTTTGGACTTTCCATCTAAAGAAAATCTTTCGACTAAGG ]
[+] EMBL CNS0978P [ AGCAAAATCATCAAGGAAGCTATCGAGACGACGATCGGAGGTAATGCTTACCAGCATGACAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATCGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATCGTGTCGGTGTTTGGACTTTCCATCTAAAGAAAATCTTTCGACTAAGGGTCATGCACAGGCACGCATTGGCGAGTTTACGAGCAATGATGTCTACTAATTTCCATAAAAAATACCGTCAATTTGGTTGATCTATAGCTGTATGAATGTTTTAAACGTCGTATTTCTTTCCCGCATTCGGTTGCTGCGTATGGGGTTTCTTACAGAATTAGACGCGCGATGCTGTATGAATTTGCGTATCTTGTGCTTCTTTCTGCCGCTGGTGGATTAACTTTTGAATGTTAGAAATCGCCTTAGCCTGTGAGCTGATTTAATTTATTTTTATTCGATAATACTATTACAATTAATAGGAACTATCTGTCCGCTGACAGAAAAAAAAAACGTATGGCAGTCTTGTGCCCCTTGTATGAAAGTTTTTCTCACCCTCAGCAGCAGTTATAGTGTAAACATCAGCTATTTTGGAAGAGAAAATTGTAGAAATAACAGGCTCGGCAGCCCACAATGTTGCACTTTTCCCTTTTAATAATCCTTTTGGTAGCCAGTTTTCGATAAAATAGTGTGATATGTCCAATGCAAAAA ]
[-] EMBL CNS09H5G [ GCTGTATGAATTTGCGTATCTTGTGCTTCTTTCTGCCGCTGGTGGATTAACTTTTGAATGTTAGAAATCGCCTTAGCCTGTGAGCTGATTTAATTTATTTTTATTCGATAATACTATTACAATTAATAGGAACTATCTGTCCGCTGACAGCATTTAGAATCGTATGGCAGTCTTGTGCCCCTTGTATGAAAGTTTTTCTCACCCTCAGCAGCAGTTATAGTGTAAACATCAGCTATTTTGGAAGAGAAAATTGTAGAAATAACAGGCTCGGCAGCCCACAATGTTGCACTTTTCCCTTTTAATAATCCTTTTGGTAGCCAGTTTTCGATAAAATAGTGTGATATGTCCAATGCAAAAATTAAATTGCAATGTAAGCCATAGCAATTAGGATAGCACAGGGCCCTACCCTCTATATCGTACGAGGCTGTGCAGCTGTCGGAAGGAAGCACTGTGTGGTGGAACGCTCCGAAACATGGAAGAAGAGAACAGTAGCAACTTATTGTGGTAGTACAGCAATTACCGACAATTGCTGTAGCACAATTTAGCAAGAAACGACACACAACAGACACAATTCATCGCGCTGTAAGTGATTGGGCTCCACGTGATGATAGGAAAGCATGGTTGGCAATACAAGTTTTGTAAATTTTCGTGCTCACACAGCGAAACCGGAAGTAAGAAATGGGAGGAAACACTAAGAATTAGGATTATGACAGGTGTACGCTTTACAAAGGAAAAACGCATTGTTTTCGTTGAGTTAACTGATAGAAGACGCGTTGATTAAACAACCATGTGTGAAGGATACACAATAGACGTAGAATATAAGAATTGATAGCACGG ]
[-] EMBL CNS0978Q [ gaAGTTATAGTGTAAACATCAGCTATTTTGGAAGAGAAAATTGTAGAAATAACAGGCTCGGCAGCCCACAATG TGCACTTTTCCCTTTTAATAATCCTTTTGGTAGCCAGTTTTCGATAAAATAGTGTGATATGTCCAATGCAAAAATTAAATTGCAATGTAAGCCATAGCAATTAGGATAGCACAGGGCCCTACCCTCTATATCGTACGAGGCTGTGCAGCTGTCGGAAGGAAGCACTGTGTGGTGGAACGCTCCGAAACATGGAAGAAGAGAACAGTAGCAACTTATTGTGGTAGTACAGCAATTACCGACAATTGCTGTAGCACAATTTAGCAAGAAACGACACACAACAGACACAATTCATCGCGCTGTAAGTGATTGGGCTCCACGTGATGATAGGAAAGCATGGTTGGCAATACAAGTTTTGTAAATTTTCGTGCTCACACAGCGAAACCGGAAGTAAGAAATGGGAGGAAACACTAAGAATTAGGATTATGACAGGTGTACGCTTTACAAAGGAAAAACGCATTGTTTTCGTTGAGTTAACTGATAGAAGACGCGATGTTTAAACAACCATGTGTGAAGGATACACAATAGACGTAGAATATAAGAATTGATA CA ]
[-] EMBL AGA283471 [ GATATGCCCAATGCAAAAATTAAATTGCAATGTAAGCCATAGCAATTAGGATAGCACAGGGCCCTACCCTCTATATCGTACGAGGCTGTGCAGCTGTCGGAAGGAAGCACTGTGTGGTGGAACGCTCCGACACATGGAAGAAGAGAACAGTAGCAACTTATTGTGGTAGTACGGCAATTACCGACAATTGCTGTAGCACAATTTAGCAAGAAACGACACACAACAGACACAATTCATCGCGCTGTAAGTGATTGGGCTGCACGTGATGATAGGAAAGCATGGTTGGCAATACAAGTTTTGTAAATTTTCGTGCTCACACAGCGAAACCGGAAGTAAGAAATGGGAGGAAACACTAAGAATTAGGATTATGACAGGTGTACGCTTTACAAAGGAAAAACGCATTGTTTTCGTTGAGTTAGCTGATAGAAGACGCGTTGATTAAACAACCATGTGTGAAGGATACACAATAGACGTAGAATATAAGAATTGATA CACGGAAAAAAAA]
[-] EMBL AGA280601 [ CGGAAGGAATCACTGTGTGGTGGAACGCCCCGACACATGGAAGAAGAGAACAGTAGCAACTTATTGTGGTAGTACGGCAATTTCCGACAATTGCTGTAGCACAATTTAGCAAGAAACGACACACAACAGACACAATTCATCGCGCTATAAGTGAGTGGGCTGCACGTGATGATAGGAAAGCATGGTTGGCATGACAAGTTTTGTAAATTTTAGTGCTCACACAGCGAAACCGGAAGTAAGAAATGGGAGGAAACTCTAAGAATTAGGATTATGACAGGTGTACGCTTTACAAAGGAAAAACGCAATGTTATCGGTGAGTTAGCTGATAGAAGACGCGATGATTAAACAACCATGTGTGAAGGATACACAATGGACGTAGACTATAAGAATTGATA CACGGAAAAAAAA]
consensusID : consensus_9471#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 831 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGGTGAACAGCGTTTAGCGGCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCACCAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAAAATCATCAAGGAAGCTATCGAAACGACGATCGGAGGTAATGCTTACCAGCATGATAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATCGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATCGTGTCGGTGTTTGGACTTTCCATCTAAAG-AAATCTTTCGACTAAGAGTCATGCACAGGCACGCATTGGCGAGTGAACGAGCAATGATGTCTACGAATTTCCATAAAACATACCGTCAATTTGGTTGATCTATAGCTGTATGAATGTTTTAAACGTCGTATTTCTTTCCCGCATTCGGTTGCTGCGTATGGGTTTTCTTACAGAATTAGGCATGCGATGCTGTATGAATTTGCGTATCTTGTGCTTCTTTCGGCCGGTAGAATATCTTTTGAATATTGGAAATCGCCTTAGCCTGTGAGCTGATTTAATTTATTTTTATTCGATAATACTATTACAATTAATAGGAACTATCTGTCCGCTGACAGCATTTANAATCGTATGGCAGTCTTGGTGCCCCTTGTATGAAAGT]
[+] EMBL BM613938 [CCGCCCACGCGTCCGCCCACGCGTCCGGTGAACAGCGTTTAGCGGCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCACCAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAAAATCATCAAGGAAGCTATCGAAACGACGATCGGAGGTAATGCTTACCAGCATGATAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATCGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATCGTGTCGGTGTTTGGACTTTCCATCTAAAG AAATCTTTCGACTAAGAGTCATGCACAGGCACGCATTGGCGAGTGAACGAGCAATGATGTCTACGAATTTCCATAAAAC ]
[+] EMBL BM578028 [ ccgGCGGCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCACCAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAAAATCATCAAGGAAGCTATCGAAACGACGATCGGAGGTAATGCTTACCAGCATGATAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATCGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATCGTGTCGGTGTTTGGACTTTCCATCTAAAG AAATCTTTCGACTAAGAGTCATGCACAGGCACGCATTGGCGAGTGAACGAGCAATGATGTCTACGAATTTCCATAAAACATACCGTCAATTTGGTTGATCTATAGCTGTATGAATGTTTTAAACGTCGTATTTCTTTCCCGCATTCGGTTGCTGCGTATGGGTTTTCTTACAGAATTAGGCATGCGATGCTGTATGAATTTGCGTATCTTGTGCTTCTTTCGGCCGGTAGAATATCTTTTGAATATTGGAAATCGCCTTAGCCTGTGAGCTGATTTAATTTATTTTTATTCGATAA ]
[+] EMBL BX604686 [ CGGCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCACCAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTAAGCAAAATCATCAAGGAAGCTATCGAGACGACGATCGGAGGTAATGCTTACCAGCATGATAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATTGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATCGTGTCGGTGTTTGGACTTTCCATCTAAAGAAAATCTTTCGACTAAGGGTCATGCACAGGCACGCATTGGCGAGTGAACGAGCAATGATGTCTACGAATTTCCATAAAAAATACCGTCAATTTGGTTGATCTATAGCTGTATGAATGTTTTAAACGTCGTATTTCTTTCCCGCATTCGGTTGCTGCGTATGGGTTTTCTTACTGAcgcgc ]
[+] EMBL BX625363 [ AGCCAGTGATNACGTGCAAATTCCGCAACGATCCCATCACCAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAAAATCATCAAGGAAGCTATCGAAACGACGATCGGAGGTAATGCTTACCAGCATGATAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATCGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATCGTGTCGGTGTTTGGACTTTCCATCTAAAG AAATCTTTCGACTAAGAGTCATGCACAGGCACGCATTGGCGAGTGAACGAGCAATGATGTCTACGAATTTCCATAAAACATACCGTCAATTTGGTTGATCTATAGCTGTATGAATGTTTTAAACGTCGTATTTCTTTCCCGCATTCGGTTGCTGCGTATGGGTTTTCTTACAGAATTANGCATGCGATGCTGTATGAATTTGCGTATCTTGTGCTTCTTTCGGCCGGTAGAATATCTTTTGAATATTGGAAATCGCCTTAGCCTGTGAGCTGATTTAATTTATTTTTATTCGATAATACTATTACAATTAATAGGAACTATCTGTCCGCTGACAGCATTTANAATCGTATGGCAGTCTTGGTGCCCCTTGTATGAAAGT]
[+] EMBL BM649617 [ ccGCACCAATTCGTCGTGGACGATGTGAGCAAAATCATCAAGGAAGCTATCGAGACGACGATCGGAGGTAATGCTTACCAGCATGATAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATCGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATCGTGTCGGTGTTTGGACTTTCCATCTAAAGAAAATCTTTCGACTAAGGGTCATGCACAGGCACGCATTGGCGAGTGAACGAGCAATGATGTCTACGAATTTCCATAAAAAATACCGTCAATTTGGTTGATCTATAGCTGTATGAATGTTTTAAACGTCGTATTTCTTTCCCGCATTCGGTTGCTGCGTATGGGTTTTCTTACAGAATTAGGCATGCGATGCTGTATGAATTTGCGTATCTTGTGCTTCTTTCGGCCGGTAGAATAACTTTTGAATATTAGAAATCG ]
consensusID : consensus_9471#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 697 fasta sequence
[CCGGAACAGCGTTTTTAGCGGCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCACCAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAAAATCATCAAGGAAGCTATCGAAACGACGATCGGAGGTAATGCTTACCAGCATGATAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATCGGTAAGTCGGATTAAGTGTAAGGAACGCTGCGCGTTTCGACATGGATTCTTTAATTTATTGCTGTATATATGCATGCGGTATACGTTGTGTGTCGATATAGTAGTGGCTATCTTTTCTTACGCGAGAATCTCTATCACGGTCTGTGTGGGGATGGCGGGGGTACTGCGGGTGGATGAGTGGTACTGCTTATCCGCTGAAGCCAGCACGGAGACCGACACCAGCTTGGATTCCACCACCGAGCATTCCTTGCGAGCCAAAACCGGCTCCGATTCCGGCTCCAAATCCGACGCGCGAGCCTACGCCTCCATTAAATCCAGTTGGAAAACTCGATCCGGCACGCAGACCGCCGTTCAGTGCGCCACCGGCAGCTGCTTGCAGTCCTGCTCCAATACCTCCGAGTGCGTTACGCACTCCTCCCAG]
[+] EMBL BM590288 [CCGGAACAGCGTTTTTAGCGGCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCACCAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAAAATCATCAAGGAAGCTATCGAAACGACGATCGGAGGTAATGCTTACCAGCATGATAAAGTTAACAAC ]
[+] EMBL BM603696 [ ccGAACAGCG TTTAGCGGCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCACCAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAAAATCATCAAGGAAGCTATCGAAACGACGATCGGAGGTAATGCTTACCAGCATGATAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATCGGTAAGTCGGATTAAGTGTAAGGAACGCTGCGCGTTTCGACATGGATTCTTTAATTTATTGCTGTATATATGCATGCGGTATACGTTGTGTGTCGATATAGTAGTGGCTATCTTTTCTTACGCGAGAATCTCTATCACGGTCTGTGTGGGGATGGCGGGGGTACTGCGGGTGGATGAGTGGTACTGCTTATCCGCTGAAGCCAGCACGGAGACCGACACCAGCTTGGATTCCACCACCGAGCATTCCTTGCGAGCCAAAACCGGCTCCGATTCCGGCTCCAAATCCGACGCGCGAGCCTACGCCTCCATTAAATCCAGTTGGAAAACTCGATCCGGCACGCAGACCGCCGTTCAGTGCGCCACCGGCAGCTGCTTGCAGTCCTGCTCCAATACCTCCGAGTGCGTTACGCACTCCTCCCAG]
consensusID : consensus_9471#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 509 fasta sequence
[CCGAGTAGCTGTGCGGAACGTTCTAGGACTTGGTGGTGAACAGCGTTTAGCGGCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCACCAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAAAATCATCAAGGAAGCTATCGAAACGACGATCGGAGGTAATGCTTACCAGCATGATAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATCGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATTCGTGTCGGTGTTTGGACTTTCCATCTAAAGAAATCTTTCGACTAAGAGTCATGCACAGGCACGCATTGGCGAGTGAAC]
[+] EMBL BM610313 [CCGAGTAGCTGTGCGGAACGTTCTAGGACTTGGTGGTGAACAGCGTTTAGCGGCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCACCAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAAAATCATCAAGGAAGCTATCGAAACGACGATCGGAGGTAATGCTTACCAGCATGATAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATCGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATTCGTGTCGGTGTTTGGACTTTCCATCTAAAGAAATCTTTCGACTAAGAGTCATGCACAGGCACGCATTGGCGAGTGAAC]
consensusID : consensus_9471#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 465 fasta sequence
[AGCCAGAATCGCCACGACGGTCAGAACGTTCTAGGACTTGGTGGTGAACAACGTTTAGCGGCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCACCAAATCAGCATGGAAGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTAAGCAAAATCATCAAGTAAGCTATCGAGACGACGATCGGAGCGTAATTGCTTACCAGCATGATAACAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATTGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCAGCTCGTGCTACTGGAATAACGAAACCGACGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATCGTGTCGGTGTTTGGACTTTCCATC]
[+] EMBL AL696709 [AGCCAGAATCGCCACGACGGTCAGAACGTTCTAGGACTTGGTGGTGAACAACGTTTAGCGGCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCACCAAATCAGCATGGAAGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTAAGCAAAATCATCAAGTAAGCTATCGAGACGACGATCGGAGCGTAATTGCTTACCAGCATGATAACAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATTGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCAGCTCGTGCTACTGGAATAACGAAACCGACGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATCGTGTCGGTGTTTGGACTTTCCATC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9471#0 ------------------------------------------------------------
consensus_9471#1 ----------------CCGCCCACGCGTCCGCCCACGCGTCCGGTGAACAGCGTTTAGCG 44
consensus_9471#3 --------CCGAGTAGCTGTGCGGAACGTTCTAGGACTTGGTGGTGAACAGCGTTTAGCG 52
consensus_9471#4 AGCCAGAATCGCCACGACGGTCAGAACGTTCTAGGACTTGGTGGTGAACAACGTTTAGCG 60
consensus_9471#2 ----------------------------------------CCGGAACAGCGTTTTTAGCG 20
consensus_9471#0 ------------------------------------GCAAGATTCGGCACGNTG-----G 19
consensus_9471#1 GCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCA 104
consensus_9471#3 GCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCA 112
consensus_9471#4 GCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCA 120
consensus_9471#2 GCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCA 80
**** * ** *** *
consensus_9471#0 ACAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAA 79
consensus_9471#1 CCAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAA 164
consensus_9471#3 CCAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAA 172
consensus_9471#4 CCAAATCAGCATGGAAGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTAAGCAA 180
consensus_9471#2 CCAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAA 140
************** ************************************** *****
consensus_9471#0 AATCATCAAGGAAGCTATCGAGACGACGATCGGAG-GTAAT-GCTTACCAGCATGACAA- 136
consensus_9471#1 AATCATCAAGGAAGCTATCGAAACGACGATCGGAG-GTAAT-GCTTACCAGCATGATAA- 221
consensus_9471#3 AATCATCAAGGAAGCTATCGAAACGACGATCGGAG-GTAAT-GCTTACCAGCATGATAA- 229
consensus_9471#4 AATCATCAAGTAAGCTATCGAGACGACGATCGGAGCGTAATTGCTTACCAGCATGATAAC 240
consensus_9471#2 AATCATCAAGGAAGCTATCGAAACGACGATCGGAG-GTAAT-GCTTACCAGCATGATAA- 197
********** ********** ************* ***** ************** **
consensus_9471#0 AGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACA 196
consensus_9471#1 AGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACA 281
consensus_9471#3 AGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACA 289
consensus_9471#4 AGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACA 300
consensus_9471#2 AGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACA 257
************************************************************
consensus_9471#0 AAAGCCGTACAAATATATCG-TAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGC 255
consensus_9471#1 AAAGCCGTACAAATATATCG-TAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGC 340
consensus_9471#3 AAAGCCGTACAAATATATCG-TAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGC 348
consensus_9471#4 AAAGCCGTACAAATATATTG-TAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGC 359
consensus_9471#2 AAAGCCGTACAAATATATCGGTAAGTCGGATTA-AGTGTA-AGGAACGCTGCGCGTTTCG 315
****************** * *** * ** * * ** * * ** * ** * **
consensus_9471#0 ATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGG 315
consensus_9471#1 ATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGG 400
consensus_9471#3 ATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGG 408
consensus_9471#4 ATACGGC-AGCTCGTGCTACTGGAATAACGAAACCGACGGTTCTTGCACAGTGCGCTGGG 418
consensus_9471#2 ACATGGATTCTTTAATTTATTGCTGTATATATGCATGCGGT--ATACGTTGTGTGTCGAT 373
* * ** * ** ** * * * *** * * *** * *
consensus_9471#0 AGAACAA-GACCATGTACTGCAT-CGTGTCGGTGTTTGG-ACTTTCCATCTAAAGAAAAT 372
consensus_9471#1 AGAACAA-GACCATGTACTGCAT-CGTGTCGGTGTTTGG-ACTTTCCATCTAAAGAAA-T 456
consensus_9471#3 AGAACAA-GACCATGTACTGCATTCGTGTCGGTGTTTGG-ACTTTCCATCTAAAGAAA-T 465
consensus_9471#4 AGAACAA-GACCATGTACTGCAT-CGTGTCGGTGTTTGG-ACTTTCCATC---------- 465
consensus_9471#2 ATAGTAGTGGCTATCTTTT-CTTACGCGAGAATCTCTATCACGGTCTGTGTGGGGATGGC 432
* * * * * ** * * * * ** * * * * ** ** *
consensus_9471#0 CTTTCGACTAAGGGTCATGCACAGGCACGCATTGGCGAGTGAA-CGAGCAATGATGTC-- 429
consensus_9471#1 CTTTCGACTAAGAGTCATGCACAGGCACGCATTGGCGAGTGAA-CGAGCAATGATGTC-- 513
consensus_9471#3 CTTTCGACTAAGAGTCATGCACAGGCACGCATTGGCGAGTGAA-C--------------- 509
consensus_9471#4 ------------------------------------------------------------
consensus_9471#2 GGGGGTACTGCGGGTGGATGAGTGGTACTGCTTATCCGCTGAAGCCAGCACGGAGACCGA 492
consensus_9471#0 TACTAATTTCCATAAAAAATACCGTCAATTTGGTTGATCTATAGCTGTATGAATGTTTTA 489
consensus_9471#1 TACGAATTTCCATAAAACATACCGTCAATTTGGTTGATCTATAGCTGTATGAATGTTTTA 573
consensus_9471#3 ------------------------------------------------------------
consensus_9471#4 ------------------------------------------------------------
consensus_9471#2 CACCAGCTTGGATTCCACCACCGAGCATTCCTTGCGAGCCAAAACCGGCTC--CGATTCC 550
consensus_9471#0 AACGTCGTATTTCTTTCCCGCATTCGGTTGCTGCGTATGGGGTTTCTTACAGAATTAGAC 549
consensus_9471#1 AACGTCGTATTTCTTTCCCGCATTCGGTTGCTGCGTATGGGTTTTCTTACAGAATTAGGC 633
consensus_9471#3 ------------------------------------------------------------
consensus_9471#4 ------------------------------------------------------------
consensus_9471#2 GGCTCCAAA--TCCGACGCGCGAGCCTACGCCTCCATTAAATCCAGTTGGAAAACTCGAT 608
consensus_9471#0 GCGCGATGCTGTATGAATTTGCGTATCTTGTGCTTCTTTCTGCCGCTGGTGGATTAACTT 609
consensus_9471#1 ATGCGATGCTGTATGAATTTGCGTATCTTGTGCTTCTTTCGGCCG---GTAGAATATCTT 690
consensus_9471#3 ------------------------------------------------------------
consensus_9471#4 ------------------------------------------------------------
consensus_9471#2 CCGGCACGCAG-----ACCGCCGTTCAGTGCGCCACCGGCAGCTGCTTGCAGTCCTGCTC 663
consensus_9471#0 TTGAATGTTAGAAATCGCCTTAGCCTGTGAGCTGATTTAATTTATTTTTATTCGATAATA 669
consensus_9471#1 TTGAATATTGGAAATCGCCTTAGCCTGTGAGCTGATTTAATTTATTTTTATTCGATAATA 750
consensus_9471#3 ------------------------------------------------------------
consensus_9471#4 ------------------------------------------------------------
consensus_9471#2 CAATACCTCCGAGTGCGTTACGCACTCCTCCCAG-------------------------- 697
consensus_9471#0 CTATTACAATTAATAGGAACTATCTGTCCGCTGACAGCATTAAGAATCGTATGGCAGTCT 729
consensus_9471#1 CTATTACAATTAATAGGAACTATCTGTCCGCTGACAGCATTTANAATCGTATGGCAGTCT 810
consensus_9471#3 ------------------------------------------------------------
consensus_9471#4 ------------------------------------------------------------
consensus_9471#2 ------------------------------------------------------------
consensus_9471#0 TG-TGCCCCTTGTATGAAAGTTTTTCTCACCCTCAGCAGCAGTTATAGTGTAAACATCAG 788
consensus_9471#1 TGGTGCCCCTTGTATGAAAGT--------------------------------------- 831
consensus_9471#3 ------------------------------------------------------------
consensus_9471#4 ------------------------------------------------------------
consensus_9471#2 ------------------------------------------------------------
consensus_9471#0 CTATTTTGGAAGAGAAAATTGTAGAAATAACAGGCTCGGCAGCCCACAATGTTGCACTTT 848
consensus_9471#1 ------------------------------------------------------------
consensus_9471#3 ------------------------------------------------------------
consensus_9471#4 ------------------------------------------------------------
consensus_9471#2 ------------------------------------------------------------
consensus_9471#0 TCCCTTTTAATAATCCTTTTGGTAGCCAGTTTTCGATAAAATAGTGTGATATGTCCAATG 908
consensus_9471#1 ------------------------------------------------------------
consensus_9471#3 ------------------------------------------------------------
consensus_9471#4 ------------------------------------------------------------
consensus_9471#2 ------------------------------------------------------------
consensus_9471#0 CAAAAATTAAATTGCAATGTAAGCCATAGCAATTAGGATAGCACAGGGCCCTACCCTCTA 968
consensus_9471#1 ------------------------------------------------------------
consensus_9471#3 ------------------------------------------------------------
consensus_9471#4 ------------------------------------------------------------
consensus_9471#2 ------------------------------------------------------------
consensus_9471#0 TATCGTACGAGGCTGTGCAGCTGTCGGAAGGAAGCACTGTGTGGTGGAACGCTCCGAAAC 1028
consensus_9471#1 ------------------------------------------------------------
consensus_9471#3 ------------------------------------------------------------
consensus_9471#4 ------------------------------------------------------------
consensus_9471#2 ------------------------------------------------------------
consensus_9471#0 ATGGAAGAAGAGAACAGTAGCAACTTATTGTGGTAGTACAGCAATTACCGACAATTGCTG 1088
consensus_9471#1 ------------------------------------------------------------
consensus_9471#3 ------------------------------------------------------------
consensus_9471#4 ------------------------------------------------------------
consensus_9471#2 ------------------------------------------------------------
consensus_9471#0 TAGCACAATTTAGCAAGAAACGACACACAACAGACACAATTCATCGCGCTGTAAGTGATT 1148
consensus_9471#1 ------------------------------------------------------------
consensus_9471#3 ------------------------------------------------------------
consensus_9471#4 ------------------------------------------------------------
consensus_9471#2 ------------------------------------------------------------
consensus_9471#0 GGGCTCCACGTGATGATAGGAAAGCATGGTTGGCAATACAAGTTTTGTAAATTTTCGTGC 1208
consensus_9471#1 ------------------------------------------------------------
consensus_9471#3 ------------------------------------------------------------
consensus_9471#4 ------------------------------------------------------------
consensus_9471#2 ------------------------------------------------------------
consensus_9471#0 TCACACAGCGAAACCGGAAGTAAGAAATGGGAGGAAACACTAAGAATTAGGATTATGACA 1268
consensus_9471#1 ------------------------------------------------------------
consensus_9471#3 ------------------------------------------------------------
consensus_9471#4 ------------------------------------------------------------
consensus_9471#2 ------------------------------------------------------------
consensus_9471#0 GGTGTACGCTTTACAAAGGAAAAACGCATTGTTTTCGTTGAGTTAACTGATAGAAGACGC 1328
consensus_9471#1 ------------------------------------------------------------
consensus_9471#3 ------------------------------------------------------------
consensus_9471#4 ------------------------------------------------------------
consensus_9471#2 ------------------------------------------------------------
consensus_9471#0 GTTGATTAAACAACCATGTGTGAAGGATACACAATAGACGTAGAATATAAGAATTGATAC 1388
consensus_9471#1 ------------------------------------------------------------
consensus_9471#3 ------------------------------------------------------------
consensus_9471#4 ------------------------------------------------------------
consensus_9471#2 ------------------------------------------------------------
consensus_9471#0 ACGGAAAAAAAA 1400
consensus_9471#1 ------------
consensus_9471#3 ------------
consensus_9471#4 ------------
consensus_9471#2 ------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||