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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9472#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1783 fasta sequence
[AGAGTGCAATCAATATCGGGACAATTTGGAAAGTTTTACGACGAAAAATATAGAAATCAAAAATAGAGACGACGAGTGGTTGTCGTTGGCGTAGTTGGTCATTTTCATATTTAGTTTGTACGCTAAACTGTATCAAAAAACCATCGCTCTCTTTTCGCTGGTCTCATCGCTTCCGGAGCGTGGTCGTAGCTGATACAAGATTACACTATCATCATTTAGATAATCGTCCCACCGAACTTGAGACGCTTGTGTTATCTTTTGCCGTACGAAAAGCGCAATGCGTGGCATATAGAGGGATCGAATGTTTGAGAGTTTACTTTGCCAGTGAGTGACGATCGTCGGTGTTTAGGTGAACGCAAGTACGAAAACCGAGTGGTGTGCAGTTTCCGGTAGGTTAACACCGTAAGAAGCACCGGCAAGAATAGTAATGACGCGCCACGCTTTATCCGTTGTGGTGCCTCAGGTCCTGCGAATATGGCGCCGGCAAGCG-GGACTACACTTCGTCGTTAGTACGTTCTGCTGGTTCACGTTGATATCATTCGTATGGTGCGGTGCTAACAATCTTCACATGAACGATGGCGTACGTACGCAGGACATCATTGCAGGTGATGTGTTTTTCGAAATTCTAGAACCTTCGGCCTTGGAGTACACGTATCGGTTGCGACCAGCGAAAGATTTCGGTGGCACGTTTGGCATTTCATACAAATCTCCGCAAGGGAAACT-GGTACCGGCGATTCCAGCGGATGCG-TGCTCTGCAAAATTCGAAAACGCCGATGAGCTGGAGGGCAACATTGCACTCGTCGAGCGGGGCCACTGTTCGTTTCTAACCAAAGCCATCAACGTGGAAGCG-AT-AGGCGGCGCA--CA-T-AATTGTGACCGAGTATGATACGGAGATCGATGACTTTGACTACTACATCGAGATGGTGCATGACAATACCGACCGCG-ATACCGACATTCCG-GCTGGATTTTTGCACGGCAAGAATGGAATAATTATTCGACAGACGCTAAAAAAGATGAACCTACCGTACGCGATCGTGAACATTCCCGTCAATCTCACCTTCATACAGCCGCACATGATAAATCAACCGCCTTGGTTGCCTTGGTAAACGAGCCATAAAGCGGTGGTAACTTGATATTTTATCGGCTCGGCAACCGACAACACCATCTGCCGGAAACCGAACAAAGCAAACCAGTGTTGAACACAAAGATGACTGAAACAATGAGGACGCTAATGCTGTTGTTGGGGAAAATGTTACTATCATGGCTCTGGTTGGCGGACAGTCGCCATGTGCTGGAGTGCTGTAGCACAT-GGGATGTTGCAACGAGACTTAACACTCACTCGGTAACACTTGCACGAAAAGATCTGACGCAGACTCGTTTATTGAAACCGTTTTGGACCAGCACCGGATTGTGCCCAC-CGGAG-CCGCGCAATGCAAGTGCAGCTTTTTTGCTATCGGAAGACACGTTGACAAACCTGGAGCTCATTGGCTCTCTGCCGGCTCGTGGTTTTAGCCATGTGCGGATCCATTGGCTTCTAGAGCTTCTTGAAGTGTAAGTTACAT-CTAAAACCTTCCTAAGCGTAACATCACATTATCTTCAATGGCTAGAAAATGGAACCATAATTTGAATTTTCTTTCCAAAAACCAACGA-TTGCAAGCAGTGTAAGCAATATATCTCCAATTCCCCAAGACCATACAGAGTATGAGTATGATGTCATGATAGGGTATGACACAGCAGCTGATTGTGATAACTTTGTTGTAAAATATATTCTGGTGATGAAAAAAAA]
[+] EMBL CNS092GC [AGAGTGCAATCAATATCGGGACAATTTGGAAAGTTTTACGACGAAAAATATAGAAATCAAAAATAGAGACGACGAGTGGTTGTCGTTGGCGTAGTTGGTCATTTTCATATTTAGTTTGTACGCTAAACTGTATCAAAAAACCATCGCTCTCTTTTCGCTGGTCTCATCGCTTCCGGAGCGTGGTCGTAGCTGATACAAGATTACACTATCATCATTTAGATAATCGTCCCACCGAACTTGAGACGCTTGTGTTATCTTTTGCCGTACGAAAAGCGCAATGCGTGGCATATAGAGGGATCGAATGTTTGAGAGTTTACTTTGCCAGTGAGTGACGATCGTCGGTGTTTAGGTGAACGCAAGTACGAAAACCGAGTGGTGTGCAGTTTCCGGTAGGTTAACACCGTAAGAAGCACCGGCAAGAATAGTAATGACGCGCCACGCTTTATCCGTTGTGGTGCCTCAGGTCCTGCGAATATGGCGCCGGCAAGCG GGACTACACTTCGTCGTTAGTACGTTCTGCTGGTTCACGTTGATATCATTCGTATGGTGCGGTGCTAACAATCTTCACATGAACGATGGCGTACGTACGCAGGACATCATTGCAGGTGATGTGTTTTTCGAAATTCTAGAACCTTCGGCCTTGGAGTACACGTATCGGTTGCGACCAGCGAAAGATTTCGGTGGCACGTTTGGCATTTCATACAAATCTCCGCAAGGGAAACT GGTACCGGCGATTCCAGCGGATGCG TGCTCTGCAAAATTCGAAAACGCCGATGAGCTGGAGGGCAACATTGCACTCGTCGAGCGGGGCCACTGTTCGTTTCTAACCAAAGCCATCAACGTGGAAGCG AT AGGCGGCGCA CA TAAATTGTGACCGAGTATGATACGGAGATCGATGACTTTGACTACTACATCGAGATGGTGCATGACAATACCGACCGCG ATACCGACATTCCG GCTGGATTTTTGCACGGCAAGAATGGAATAATTATTCGACA ]
[+] EMBL BM603924 [ ccgAATCAATATCGGGACAATTTGGAAAGTTTTACGACGAAAAATATAGAAATCAAAAATAGAGACGACGAGTGGTTGTCGTTGGCGTAGTTGGTCATTTTCATATTTAGTTTGTACGCTAAACTGTATCAAAAAACCATCGCTCTCTTTTCGCTGGTCTCATCGCTTCCGGAGCGTGGTCGTAGCTGATACAAGATTACACTATCATCATTTAGATAATCGTCCCACCGAACTTGAGACGCTTGTGTTATCTTTTGCCGTACGAAAAGCGCAATGCGTGGCATATAGAGGGATCGAATGTTTGAGAGTTTACTTTGCCAGTGAGTGACGATCGTCGGTGTTTAGGTGAACGCAAGTACGAAAACCGAGTGGTGTGCAGTTTCCGGTAGGTTAACACCGTAAGAAGCACCGGCAAGAATAGTAATGACGCGCCACGCTTTATCCGTTGTGGTGCCTCAGGTCCTGCGAATATGGCGCCGGCAAGCG GGACTACACTTCGTCGTTAGTACGTTCTGCTGGTTCACGTTGATATCATTCGTATGGTGCGGTGCTAACAATCTTCACA ]
[+] EMBL BX602401 [ GACAATTTGGAAAGTTTTACGACGAAAAATATAGAAATCAAAAATAGAGACGACGAGTGGTTGTCGTTGGCGTAGTTGGTCATTTTCATATTTAGTTTGTACGCTAAACTGTATCAAAAAACCATCGCTCTCTTTTCGCTGGTCTCATCGCTTCCGGAGCGTGGTCGTAGCTGATACAAGATTACACTATCATCATTTAGATAATCGTCCCACCGAACTTGAGACGCTTGTGTTATCTTTTGCCGTACGAAAAGCGCAATGCGTGGCATATAGAGGGATCGAATGTTTGAGAGTTTACTTTGCCAGTGAGTGACGATCGTCGGTGTTTAGGTGAACGCAAGTACGAAAACCGAGTGGTGTGCAGTTTCCGGTAGGTTAACACCGTAAGAAGCACCGGCAAGAATAGTAATGACGCGCCACGCTTTATCCGTTGTGGTGCCTCAGGTCCTGCGAATATGGCGCCGGCAAGCG GGACTACACTTCGTCGTTAGTACGTTCTGCTGGTTCACGTTGATATCATTCGTATGGTGCGGTGCTAACAATCTTCACATGAACGATGGCGTACGTACGCAGGACATCATTGCAGGTGATGTGTTTTTCGAAATTCTAGAACCTTCGGCCTTGGAGT ]
[+] EMBL BX620920 [ CGTAGTTGGTCATTTTCATATTTAGTTTGTACGCTAAACTGTATCAAAAAACCATCGCTCTCTTTTCGCTGGTCTCATCGCTTCCGGAGCGTGGTCGTAGCTGATACAAGATTACACTATCATCATTTAGATAATCGTCCCACCGAACTTGAGACGCTTGTGTTATCTTTTGCCGTACGAAAAGCGCAATGCGTGGCATATAGAGGGATCGAATGTTTGAGAGTTTACTTTGCCAGTGAGTGACGATCGTCGGTGTTTAGGTGAACGCAAGTACGAAAACCGAGTGGTGTGCAGTTTCCGGTAGGTTAACACCGTAAGAAGCACCGGCA AATAGTAATGACGCGCCACGCTTTATCCGTTGTGGTGCCTCAGGTCCTGCGAATATGGCGCCGGCAAGCG GGACTACACTTCGTCGTTAGTACGTTCTGCTGGTTCACGTTGATATCATTCGTATGGTGCGGTGCTAACAATCTTCACATGAACGATGGCGTACGTACGCAGGACATCATTGCAGGTGATGTGTTTTTCGAAATTCTAGAACCTTCGGCCTTGGAGTACACGTATCGGTTGCGACC ]
[+] EMBL CNS08VH6 [ TGCGAATATGGCGCCGGCAAGCG GGACTACACTTCGTCGTTAGTACGTTCTGCTGGTTCACGTTGATATCATTCGTATGGTGCGGTGCTAACAATCTTCACATGAACGATGGCGTACGTACGCAGGACATCATTGCAGGTGATGTGTTTTTCGAAATTCTAGAACCTTCGGCCTTGGAGTACACGTATCGGTTGCGACCAGCGAAAGATTTCGGTGGCACGTTTGGCATTTCATACAAATCTCCGCAAGGGAAACT GGTACCGGCGATTCCAGCGGATGCG TGCTCTGCAAAATTCGAAAACGCCGATGAGCTGGAGGGCAACATTGCACTCGTCGAGCGGGGCCACTGTTCGTTTCTAACCAAAGCCATCAACGTGGAAGCG AT AGGCGGCGCA CA T AATTGTGACCGAGTATGATACGGAGATCGATGACTTTGACTACTACATCGAGATGGTGCATGACAATACCGACCGCG ATACCGACATTCCG GCTGGATTTTTGCACGGCAAGAATGGAATAATTATTCGACAGACGCTAAAAAAGATGAACCTACCGTACGCGATCGTGAACATTCCCGTCAATCTCACCTTCATACAGCCGCACATGATAAATCAACCGCCTTGGTTGCCTTGGTAAACGAGCCATAAAGCGGTGGTAACTTGATATTTTATCGGCTCGGCAACCGACAACACCATCTGCCGGAAACCGAACAAAGCAAACCAGTGTTGAACACAAAGATGACTGAAACAATGAGGACGCTAATGCTGTTGTTGGGGAAAATGTTACTATCATGGCTCTGGTTGGCGGACAGTCGCCATGTGCTGGAGTGCTGTAGCACATGGGGATGTTGCAACGAGACTTAACACTCACTCGGTAACACTTGCACGAAAAGATCTGACGCAGACTCGTTTATTGAAACCGTTTTGGACCAGCACCGGATTGTGCCCAC CGGAG CCGCGCAATGCAAGTGCAGCTTTTTTGCTATCGGAAGACACGTTGACAAACCTGGAGCTCATTGGCTCTCTGCCGGCTCGTGGTTTTAGCCATGTGCGGATC ]
[+] EMBL CNS08IRZ [ TATGGCGCCGGCAAGCGCGGACTACACTTCGTCGTTAGTACGTTCTGCTGGTTCACGTTGATATCATTCGTATGGTGCGGTGCTAACAATCTTCACATGAACGATGGCGTACGTACGCAGGACATCATTGCAGGTGATGTGTTTTTCGAAATTCTAGAACCTTCGGCCTTGGAGTACACGTATCGGTTGCGACCAGCGAAAGATTTCGGTGGCACGTTTGGCATTTCATACAAATCTCCGCAAGGGAAACT GGTACCGGCGATTCCAGCGGATGCG TGCTCTGCAAAATTCGAAAACGCCGATGAGCTGGAGGGCAACATTGCACTCGTCGAGCGGGGCCACTGTTCGTTTCTAACCAAAGCCATCAACGTGGAAGCG AT AGGCGGCGCA CA T AATTGTGACCGAGTATGATACGGAGATCGATGACTTTGACTACTACATCGAGATGGTGCATGACAATACTTTTCGCG ATACCGACATTCCG GCTGGATTTTTGCACGGCAAGAATGGAATAATTATTCGACAGACGCTAAAAAAGATGAACCTACCGTACGCGATCGTGAACATTCCCGTCAATCTCACCTTCATACAGCCGCACATGATAAATCAACCGCCTTGGTTGCCTTGGTAAACGAGCCATAAAGCGGTGGTAACTTGATATTTTATCGGCTCGGCAACCGACAACACCATCTGCCGGAAACCGAACAAAGCAAACCAGTGTTGAACACAAAGATGACTGAAACAATGAGGACGCTAATGCTGTTGTTGGGGAAAATGTTACTATCATGGCTCTGGTTGGCGGACAGTCGCCATGTGCTGGAGTTCTGTAGCACATGGGGATGTTGCAACGAGACTTAACACTCACTCGGTAACACTTGCACGAAAAGATCTGACGCAGACTCGTTTATTGAAACCGTTTTGGACCAGCACCGGATTGTG CCAC CGGAG CCGCGC ]
[+] EMBL CNS09J0H [ ccTGTGTTTTTCG AATTCTAGAACCTTCGGCCTTGGAGTACACGTATCGGTTGCGACCAGCGAAAGATTTCGGTGGCACGTTTGGCATTTCATACAAATCTCCGCAAGGGAAACT GGTACCGGCGATTCCAGCGGATGCG TGCTCTGCAAAATTCGAAAACGCCGATGAGCTGGAGGGCAACATTGCACTCGTCGAGCGGGGCCACTGTTCGTTTCTAACCAAAGCCATCAGCGTGGAAGCG AT AGGCGGCGCA CATT AATTGTGACCGAGTATGATACGGAGATCGATGACTTTGACTACTACATCGAGATGGTGCATGACAATACCGACCGCG ATACCGACATTCCG GCTGGATTTTTGCACGGCAAGAATGGAATAATTATTCGACAGACGCTAAAAAAGATGAACCTACCGTACGCGATCGTGAACATTCCCGTCAATCTCACCTTCATACAGCCGCACATGATAAATCAACCGCCTTGGTTGCCTTGGTAAACGAGCCATAAAGCGGTGGTAACTTGATATTTTATCGGCTCGGCAACCGACAACACCATCTGCCGGAAACCGAACAAAGCAAACCAGTGTTGAACACAAAGATGACTGAAACAATGAGGACGCTAATGCTGTTGTTGGGGAAAATGTTACTATCATGGCTCTGGTTGGCGGACAGTCGCCATGTGCTGGAGTGCTGTAGC CAT GGGATGTTGCAACGAGACTTAACACTCACTCGGTAACACTTGCACGAAAAGATCTGACGCAGACTCGTTTATTGAAACCGTTTTGGACCAGCACCGGATTGTGCCCAC CGGAG CCGCGCAATGCAAGTGCAGCTTTTTTGCTATCGGAAGACACGTTGACAAACCTGGAGCTCATTGGCTCTCTGCCGGCTCGTGGTTTTAGCCATGTGCGGATCCATTGGCTTCTAGAGCTTCTTGAAGTGTAAGTTACAT CTAAAACCTTCCTAAGCGTAACA ]
[+] EMBL CNS09RRQ [ cctcTTTTTCGAAATTCTAGAACCTTCGGCCTTGGAGTACACGTATCGGTTGCGACCAGCGAAAGATTTCGGTGGCACGTTTGGCATTTCATACAAATCTCCGCAAGGGAAACTGGGTACCGGCGATTCCAGCGGATGCGCTGCTCTGCAAAATTCGAAAACGCCGATGAGCTGGAGGGCAACATTGCACTCGTCGAGCGGGGCCACTGTTCGTTTCTAACCAAAGCCATCAACGTGGAAGCGCAT AGGCGGCGCA CA T AATTGTGACCGAGTATGATACGGAGATCGATGACTTTGACTACTACATCGAGATGGTGCATGACAATACCGACCGCGCATACCGACATTCCGCGCTGGATTTTTGCACGGCAAGAATGGAATAATTATTCGACAGACGCTAAAAAAGATGAACCTACCGTACGCGATCGTGAACATTCCCGTCAATCTCACCTTCATACAGCCGCACATGATAAATCAACCGCCTTGGTTGCCTTGGTAAACGAGCCATAAAGCGGTGGTAACTTGATATTTTATCGGCTCGGCAACCGACAACACCATCTGCCGGAAACCGAACAAAGCAAACCAGTGTTGAACACAAAGATGACTGAAACAATGAGGACGCTAATGCTGTTGTTGGGGAAAATGT ]
[-] EMBL CNS092GD [ TTGCACTCGTCGAGCGGGGCCACTGTTCGTTTCTAACCAAAGCCATCAACGTGGAAGCG AT AGGC GCGCAGCCA T AATTGTGACCGAGTATGATACGGAGATCGATGACTTTGACTACTACATCGAGATGGTGCATGACAATACCGACCGCG ATACCGACATTCCG GCTGGATTTTTGCACGGCAAGAATGGAATAATTATTCGACAGACGCTAAAAAAGATGAACCTACCGTACGCGATCGTGAACATTCCCGTCAATCTCACCTTCATACAGCCGCACATGATAAATCAACCGCCTTGGTTGCCTTGGTAAACGAGCCATAAAGCGGTGGTAACTTGATATTTTATCGGCTCGGCAACCGACAACACCATCTGCCGGAAACCGAACAAAGCAAACCAGTGTTGAACACAAAGATGACTGAAACAATGAGGACGCTAATGCTGTTGTTGGGGAAAATGTTACTATCATGGCTCTGGTTGGCGGACAGTCGCCATGTGCTGGAGTGCTGTAGCACAT GGGATGTTGCAACGAGACTTAAAACTCACTCGGTAAAACTTGCACGAAAAGATCTGACGCAGACTCGTTTATTGAAACCGTTTTGGACCAGCACCGGATTGTGCCCAC CGGAG CCGCGCAATGCAAGTGCAGCTTTTTTGCTATCGGAAGACACGTTGACAAACCTGGAGCTCATTGGCTCTCTGCCGGCTCGTGGTTTTAGCCATGTGCGGATCCATTGGCTTCTAGAGCTTCTTGAAGTGTAAGTTACAT CTAAAACCTTCCTAAGCGTAACATCACATTATCTTCAATGGCTAGAAAATGGAACCATAATTTGAATTTTCTTTCCAAAAACCAACGA TTGCAAGCAGTGTAAGCAATATATCTCCAATTCCCCAAGACCATACAGAGTATGAGTATGATGTCATGATAGGGTATGACACAGCAGCTGATTGTGATAACTTTGTTGTAAAATATATTC ]
[+] EMBL CNS08W2V [ AGCGGGGCCACTGTTCGTTTCTAACCAAAGCCATCAACTTTTTAGCG AT AGGCGGCGCA CA TAAAATGTGACCGAGTATGATACGGAGATCGATGACTTTGACTACTACATCGAGATGGTGCATGACAATACCGACCGCG ATACCGACATTCCG GCTGGATTTTTGCACGGCAAGAATGGAATAATTATTCGACAGACGCTAAAAAAGATGAACCTACCGTACGCGATCGTGAACATTCCCGTCAATCTCACCTTCATACAGCCGCACATGATAAATCAACCGCCTTGGTTGCCTTGGTAAACGAGCCATAAAGCGGTGGTAACTTGATATTTTATCGGCTCGGCAACCGACAACACCATCTGCCGGAAACCGAACAAAGCAAACCAGTGTTGAACACAAAGATGACTGAAACAATGAGGACGCTAATGCTGTTGTTGGGGAAAATGTTACTATCATGGCTCTGGTTGGCGGACAGTCGCCATGTGCTGGAGTGCTGTAGCACATGGGGATGTTGCAACGAGACTTAACACTCACTCGGTAACACTTGCACGAAAAGATCTGACGCAGACTCGTTTATTGAAACCGTTTTGGACCAGCACCGGATTGTGCCCAC CGGAG CCGCGCAATGC ]
[-] EMBL CNS08W2W [ TGTTCGTTTCTAACCAAAGCCATCAACGTGGAAGCG ATCAGGCGGCGCAGCCA T AATTGTGACCGAGTATGATACGGAGATCGATGACTTTGACTACTACATCGAGATGGTGCATGACAATACCGACCGCG ATACCGACATTCCG GCTGGATTTTTGCACGGCAAGAATGGAATAATTATTCGACAGACGCTAAAAAAGATGAACCTACCGTACGCGATCGTGAAAATTCCCGTCAATCTCACCTTCATACAGCCGCACATGATAAATCAACCGCCTTGGTTGCCTTGGTAAACGAGCCATAAAGCGGTGGTAACTTGATATTTTATCGGCTCGGCAACCGACAACACCATCTGCCGGAAACCGAACAAAGCAAACCAGTGTTGAACACAAAGATGACTGAAACAATGAGGACGCTAATGCTGTTGTTGGGGAAAATGTTACTATCATGGCTCTGGTTGGCGGACAGTCGCCATGTGCTGGAGTGCTGTAGCACAT GGGATGTTGCAACGAGACTTAAAACTCACTCGGTAACACTTGCACGAAAAGATCTGACGCAAACTCGTTTATTGAAACAAATTTGGACCAGCACCGGATTGTGCCCAC CGGAG CCGCGCAATGCAAGTGCAGCTTTTTTGCTATCGGAAGACACGTTGACAAACCTGGAGCTCATTGGCTCTCTGCCGGCTCGTGGTTTTAGCCATGTGCGGATCCATTGGCTTCTAGAGCTTCTTGAAGTGTAAGTTACAT CTAAAACCTTCCTAAGCGTAACATCACATTATCTTCAATGGCTAGAAAATGGAACCATAATTTGAATTTTCTTTCCAAAAACCAACGA TTGCAAGCAGTGTAAGCAATATATCTCCAATTCCCCAAGACCATACAGAGTATGAGTATGATGTCATGATAGGGTATGACACAGCAGCTGATTGTGATAACTTTGTTGTAAAATA ]
[-] EMBL CNS08VH7 [ GTTCGTTTCTAACCAAAGCCATCAACGTGGAAGCG AT AGGC GCGCAGCCA T AATTGTGACCGAGTATGATACGGAGATCGATGACTTTGACTACTACATCGAGATGGTGCATGACAATACCGACCGCG ATACCGACATTCCG GCTGGATTTTTGCACGGCAAGAATGGAATAATTATTCGACAGACGCTAAAAAAGATGAACCTACCGTACGCGATCGTGAACATTCCCGTCAATCTCACCTTCATACAGCCGCACATGATAAATCAACCGCCTTGGTTGCCTTGGTAAACGAGCCATAAAGCGGTGGTAACTTGATATTTTATCGGCTCGGCAACCGACAACACCATCTGCCGGAAACCGAACAAAGCAAACCAGTGTTGAACACAAAGATGACTGAAACAATGAGGACGCTAATGCTGTTGTTGGGGAAAATGTTACTATCATGGCTCTGGTTGGCGGACAGTCGCCATGTGCTGGAGTGCTGTAGCACAT GGGATGTTGCAACGAGACTTAAAACTCACTCGGTAACACTTGCACGAAAAGATCTGACGCAGACTCGTTTATTGAAACCGTTTTGGACCAGCACCGGATTGTGCCCAC CGGAG CCGCGCAATGCAAGTGCAGCTTTTTTGCTATCGGAAGACACGTTGACAAACCTGGAGCTCATTGGCTCTCTGCCGGCTCGTGGTTTTAGCCATGTGCGGATCCATTGGCTTCTAGAGCTTCTTGAAGTGTAAGTTACAT CTAAAACCTTCCTAAGCGTAACATCACATTATCTTCAATGGCTAGAAAATGGAACCATAATTTGAATTTTCTTTCCAAAAACCAACGATTTGCAAGCAGTGTAAGCAATATATCTCCAATTCCCCAAGACCATACAGAGTATGAGTATGATGTCATGATAGGGTATGACACAGCAGCTGATTGTGATAACTTTGTTGTAAAATATA ]
[-] EMBL CNS08IS0 [ ATTGTGACCGAGTATGATACGGAGATCGATGACTTTGACTACTACATCGAGATGGTGCATGACAATACCGACCGCG ATACCGACATTCCG GCTGGATTTTTGCACGGCAAGAATGGAATAATTATTCGACAGACGCTAAAAAAGATGAACCTACCGTACGCGATCGTGAACATTCCCGTCAATCTCACCTTCATACAGCCGCACATGATAAATCAACCGCCTTGGTTGCCTTGGTAAACGAGCCATAAAGCGGTGGTAACTTGATATTTTATCGGCTCGGCAACCGACAACACCATCTGCCGGAAACCGAACAAAGCAAACCAGTGTTGAACACAAAGATGACTGAAACAATGAGGACGCTAATGCTGTTGTTGGGGAAAATGTTACTATCATGGCTCTGGTTGGCGGACAGTCGCCATGTGCT AAAAACTGTAGCACAT GGGATGTTGCAACGAGACTTAAAACTCACTCGGTAACACTTGCACGAAAAGATCTGACGCAGACTCGTTTATTGAAACCGTTTTGGACCAGCACCGGATTGTGCCCAC CGGAG CCGCGCAATGCAAGTGCAGCTTTTTTGCTATCGGAAGACACGTTGACAAACCTGGAGCTCATTGGCTCTCTGCCGGCTCGTGGTTTTAGCCATGTGCGGATCCATTGGCTTCTAGAGCTTCTTGAAGTGTAAGTTACATACTAAAACCTTCCTAAGCGTAACATCACATTATCTTCAATGGCTAGAAAATGGAACCATAATTTGAATTTTCTTTCCAAAAACCAACGA TTGCAAGCAGTGTAAGCAATATATCTCCAATTCCCCAAGACCATACAGAGTATGAGTATGATGTCATGATAGGGTATGACACAGCAGCTGATTGTGATAACTTTGTTGTAAA ]
[-] EMBL CNS09J0I [ GGGAAAATGTTACTATCATGGCTCTGGTTGGCGGACAGTCGCCATGTGCTGGAGTGCTGTAGCACAT GGGATGTTGCAACGAGACTTAAAACTCACTCGGTAAAACTTGCACGAAAAGATCTGACGCAGACTCGTTTATTGAAACCGTTTTGGACCAGCACCGGATTGTGCCCAC CGGAG CCGCGCAATGCAAGTGCAGCTTTTTTGCTATCGGAAGACACGTTGACAAACCTGGAGCTCATTGGCTCTCTGCCGGCTCGTGGTTTTAGCCATGTGCGGATCCATTGGCTTCTAGAGCTTCTTGAAGTGTAAGTTACAT CTAAAACCTTCCTAAGCGTAACATCACATTATCTTCAATGGCTAGAAAATGGAACCATAATTTGAATTTTCTTTCCAAAAACCAACGA TTGCAAGCAGTGTAAGCAATATATCTCCAATTCCCCAAGACCATACAGAGTATGAGTATGATGTCATGATAGGGTATGACACAGCAGCTGATTGTGATAACTTTGTTGTAAAATATATTCTGGTGATGA ]
[-] EMBL CNS09RRR [ GAGTGCTGTAGCACAT GGGATGTTGCAACGAGACTTAACACTCACTCGGTAAAACTTGCACGAAAAGATCTGACGCAGACTCGTTTATTGAAACCGTTTTGGACCAGCACCGGATTGTGCCCACGCGGAGCCCGCGCAATGCAAGTGCAGCTTTTTTGCTATCGGAAGACACGTTGACAAACCTGGAGCTCATTGGCTCTCTGCCGGCTCGTGGTTTTAGCCATGTGCGGATCCATTGGCTTCTAGAGCTTCTTGAAGTGTAAGTTACAT CTAAAACCTTCCTAAGCGTAACATCACATTATCTTCAATGGCTAGAAAATGGAACCATAATTTGAATTTTCTTTCCAAAAACCAACGA TTGCAAGCAGTGTAAGCAATATATCTCCAATTCCCCAAGACCATACAGAGTATGAGTATGATGTCATGATAGGGTATGACACAGCAGCTGATTGTGAT ACTTTGTTGTAAAATATt ]
[-] EMBL AGA280620 [ GGTAACACTTGCACGAAAAGATTTGACGCAGACTCGTTTAATGAAACCGTTTTGGACCAGCACCGGATTGTGCCCAC CGGAG CCGCGCAATGCAAGTGCAGCTTTTTTGCTATCGCAAGACACGTTGACAAACCTGGAGCTCATTGGCTCTCTGCCGGCTCGTGGTTTTAGCCATGTGCGGATCCATTGGCTTCTAGAGCTTATTGAAGTGTAAGTTACAT CTAAAACCTTCCTAAGCGTAACATCACATTATCTTCAAGGGCTAGAAAATGGAACCATAATTTGAATTTTCTTTCCAAAAACCAACGA TTTCAAGCAGTGTAAGCAATATATCTCCAATTCCCCAAGACCATACAGAGTATGAGTATGATGTCATGATAGGGTATGACACAGCAGCTGATTGTGATAACTTTGTTGTAAAATATATTCTTTTAATGAAAAAAAA]
consensusID : consensus_9472#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 802 fasta sequence
[ATCCCCCGCAGGTTATTGGTCATTTTCATATTTAGTCCTGTACGCTAAACTGTATCAAAAAACCATCGCTCTCTTTTCGNTGGTCTCATCGCTTCCGGAGCGTGGTCGTAGCTGATACAAGATTACACTATCATCATATATAGATAATCGTCCCACCGAACTTGAGACGCTATGTGTAATCTTTATGCCGTACGAANAAGCGCATGCGTGGGCCATATTAGNGGGATCGAATTGTCATGAGAGGTTATTACTATATGCCCAGTGGNAGTTGACGATACCGNCGGGATTGGTTCNAGNGGTGAACACGGCAAATGTACCGGAAAGAACACNCGGAAGGTAGGGCTGGTTCGCCAAGTGATATGTNCCCGGTGTTACCCCTTNGCCGGCAACATTAATTGGGCCGGCCCCGAGGACCAAAGACCAGGGGGCAACNTNAAACCAACGATATACCGGCTCCAGNNATACAAGGTNAAACTGNTAACCTTGGCTTAGCGTTACCAACCGGTTCGGATNAATTTCCCAATTTCANNCCCGCGCTCNANNTTAGGGGGGTTNAGGACNCGGNGGATAGGGACCTTAACAANTGCGAAACAATNACCCTTTACTTACCNAAACACACTTTGGANACAACCCCGGTGCAACTTAGCGGACACCGGTTTAACACCCGGTTAAACCCGGACCCCAAGGGGAAAAGCGACACTTTACCACATCAATATGGACCCACGGGGTCTNCGGGACNTTCGGCTTAGGGTATCACAGAGAACTACCGGGCCACACAACANTCATACCCTTAACANGACAA]
[+] EMBL AL695693 [ATCCCCCGCAGGTTATTGGTCATTTTCATATTTAGTCCTGTACGCTAAACTGTATCAAAAAACCATCGCTCTCTTTTCGNTGGTCTCATCGCTTCCGGAGCGTGGTCGTAGCTGATACAAGATTACACTATCATCATATATAGATAATCGTCCCACCGAACTTGAGACGCTATGTGTAATCTTTATGCCGTACGAANAAGCGCATGCGTGGGCCATATTAGNGGGATCGAATTGTCATGAGAGGTTATTACTATATGCCCAGTGGNAGTTGACGATACCGNCGGGATTGGTTCNAGNGGTGAACACGGCAAATGTACCGGAAAGAACACNCGGAAGGTAGGGCTGGTTCGCCAAGTGATATGTNCCCGGTGTTACCCCTTNGCCGGCAACATTAATTGGGCCGGCCCCGAGGACCAAAGACCAGGGGGCAACNTNAAACCAACGATATACCGGCTCCAGNNATACAAGGTNAAACTGNTAACCTTGGCTTAGCGTTACCAACCGGTTCGGATNAATTTCCCAATTTCANNCCCGCGCTCNANNTTAGGGGGGTTNAGGACNCGGNGGATAGGGACCTTAACAANTGCGAAACAATNACCCTTTACTTACCNAAACACACTTTGGANACAACCCCGGTGCAACTTAGCGGACACCGGTTTAACACCCGGTTAAACCCGGACCCCAAGGGGAAAAGCGACACTTTACCACATCAATATGGACCCACGGGGTCTNCGGGACNTTCGGCTTAGGGTATCACAGAGAACTACCGGGCCACACAACANTCATACCCTTAACANGACAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9472#0 AGAGTGCAATCAATATCGGGACAATTTGGAAAGTTTTACGACGAAAAATATAGAAATCAA 60
consensus_9472#1 ------------------------------------------------------------
consensus_9472#0 AAATAGAGACGACGAGTGGTTGTCGTTGGCGTAGTTGGTCATTTTCATATTTAGTT-TGT 119
consensus_9472#1 ------------------ATCCCCCGCAG-GTTATTGGTCATTTTCATATTTAGTCCTGT 41
* * * ** ********************* ***
consensus_9472#0 ACGCTAAACTGTATCAAAAAACCATCGCTCTCTTTTCGCTGGTCTCATCGCTTCCGGAGC 179
consensus_9472#1 ACGCTAAACTGTATCAAAAAACCATCGCTCTCTTTTCGNTGGTCTCATCGCTTCCGGAGC 101
************************************** *********************
consensus_9472#0 GTGGTCGTAGCTGATACAAGATTACACTATCATCATTTA--GATAATCGTCCCACCGAAC 237
consensus_9472#1 GTGGTCGTAGCTGATACAAGATTACACTATCATCATATATAGATAATCGTCCCACCGAAC 161
************************************ ** *******************
consensus_9472#0 TTGAGACGCT-TGTGTTATCTTT-TGCCGTACGAAAAGCGCAATGCGTGG--CATAT-AG 292
consensus_9472#1 TTGAGACGCTATGTGTAATCTTTATGCCGTACGAANAAGCGCATGCGTGGGCCATATTAG 221
********** ***** ****** *********** * ******** ***** **
consensus_9472#0 AGGGATCGAATGTTTGAGAGTTTACTTTGCCAGTGAGTGACGATCGTCGGTGTTTAGGTG 352
consensus_9472#1 NGGGATCGAATTGTCATGAG---AGGTTATTACTATATGCCCA--GTGGNAGTTGACGAT 276
********** * *** * ** * * ** * * ** * *** * *
consensus_9472#0 AACGCAAGTACGAAAACCGAGTGGTGTGCAGTTTCCGGTAGGTTAACACCGTAAGAAGCA 412
consensus_9472#1 ACCGNCGGGATTGGT-TCNAGNGGTGAACA-----CGGCAAAT--GTACCGGAAAGAACA 328
* ** * * * ** **** ** *** * * **** ** * **
consensus_9472#0 CCGGCAAGAATAGTAATGACGCGCCACGC--TTTATCCGTTGTGGTGCCTCAGGTCCTGC 470
consensus_9472#1 CNCGGAAGG-TAGGGCTGGTTCGCCAAGTGATATGTNCCCGGTGTTACCCCTTNGCCGGC 387
* * *** *** ** ***** * * * * * *** * ** * ** **
consensus_9472#0 GA-AT--ATGGCGCCGGCAAGCGGGACTACACTTCGTCGTTAGTACGTTCTGCTGGTT-C 526
consensus_9472#1 AACATTAATTGGGCCGGCCCCGAGGACCAAAGACCAGGGGGCA-ACNTNAAACCAACGAT 446
* ** ** * ****** **** * * * * ** * *
consensus_9472#0 ACGTTGATATCATTCGTATGGTGCGGTGCTAACAATCTTCACATGAACGATGGCGTACG- 585
consensus_9472#1 ATACCGGCTCCAGNNATACAAGGTNAAACTGNTAACCTTGGCTT-AGCGTTACCAACCGG 505
* * ** ** * ** ** *** * * * ** * * **
consensus_9472#0 TACGCAGGACATCATTGCAGGTGATGTGTTTTTCGAAATTCTAGAACCTTCGGCCTTGGA 645
consensus_9472#1 TTCGGATNAATTTCCCAATTTCANNCCCGCGCTCNANNTTAGGGGGGTTNAGGACNCGGN 565
* ** * * * ** * ** * * ** * **
consensus_9472#0 GTACACGTATCGGTTGCGACCAGCGAAAGATTTCGGTGGCACGTTTGGCATTTCATACAA 705
consensus_9472#1 GGATAGGGACC--TTAACAANTGCGAAACAATN-------ACCCTTTACTTACCNAAACA 616
* * * * * * ** * ****** * * ** ** * * * * *
consensus_9472#0 ATCTCCGCAAGGGAAACTGGTACCGGCGATTC--CAGCGGATGCGTGCTCTGCAAAATTC 763
consensus_9472#1 CACTTTGGANACAACCCCGGTGCAACTTAGCGGACACCGGTTTAACACCCGGTTAAACCC 676
** * * * * *** * * ** *** * * * * *** *
consensus_9472#0 GAAAACGCCGATGAGCTGGAGGGCAACATTGCACT-CGTCGAGCGGGGCCACTGTTCGTT 822
consensus_9472#1 GG--ACCCCAAGGGG---AAAAGCGACACTTTACCACATCAATATGGACCCACG---GGG 728
* ** ** * * * * ** *** * ** * ** * ** ** * *
consensus_9472#0 TCTAACCAAAGCCATCAACGTGGAAGCGATAGGCGGCGCACATAATTGTGACCGAGTATG 882
consensus_9472#1 TCTN--CGGGACNTTCGGCTTAG--------GGTATCACAGAGAACT---ACCGGGCC-- 773
*** * * ** * * * ** * ** * ** * **** *
consensus_9472#0 ATACGGAGATCGATGACTTTGACTACTACATCGAGATGGTGCATGACAATACCGACCGCG 942
consensus_9472#1 ACACAACANTC-ATACCCTTAAC-ANGACAA----------------------------- 802
* ** ** ** * ** ** * ***
consensus_9472#0 ATACCGACATTCCGGCTGGATTTTTGCACGGCAAGAATGGAATAATTATTCGACAGACGC 1002
consensus_9472#1 ------------------------------------------------------------
consensus_9472#0 TAAAAAAGATGAACCTACCGTACGCGATCGTGAACATTCCCGTCAATCTCACCTTCATAC 1062
consensus_9472#1 ------------------------------------------------------------
consensus_9472#0 AGCCGCACATGATAAATCAACCGCCTTGGTTGCCTTGGTAAACGAGCCATAAAGCGGTGG 1122
consensus_9472#1 ------------------------------------------------------------
consensus_9472#0 TAACTTGATATTTTATCGGCTCGGCAACCGACAACACCATCTGCCGGAAACCGAACAAAG 1182
consensus_9472#1 ------------------------------------------------------------
consensus_9472#0 CAAACCAGTGTTGAACACAAAGATGACTGAAACAATGAGGACGCTAATGCTGTTGTTGGG 1242
consensus_9472#1 ------------------------------------------------------------
consensus_9472#0 GAAAATGTTACTATCATGGCTCTGGTTGGCGGACAGTCGCCATGTGCTGGAGTGCTGTAG 1302
consensus_9472#1 ------------------------------------------------------------
consensus_9472#0 CACATGGGATGTTGCAACGAGACTTAACACTCACTCGGTAACACTTGCACGAAAAGATCT 1362
consensus_9472#1 ------------------------------------------------------------
consensus_9472#0 GACGCAGACTCGTTTATTGAAACCGTTTTGGACCAGCACCGGATTGTGCCCACCGGAGCC 1422
consensus_9472#1 ------------------------------------------------------------
consensus_9472#0 GCGCAATGCAAGTGCAGCTTTTTTGCTATCGGAAGACACGTTGACAAACCTGGAGCTCAT 1482
consensus_9472#1 ------------------------------------------------------------
consensus_9472#0 TGGCTCTCTGCCGGCTCGTGGTTTTAGCCATGTGCGGATCCATTGGCTTCTAGAGCTTCT 1542
consensus_9472#1 ------------------------------------------------------------
consensus_9472#0 TGAAGTGTAAGTTACATCTAAAACCTTCCTAAGCGTAACATCACATTATCTTCAATGGCT 1602
consensus_9472#1 ------------------------------------------------------------
consensus_9472#0 AGAAAATGGAACCATAATTTGAATTTTCTTTCCAAAAACCAACGATTGCAAGCAGTGTAA 1662
consensus_9472#1 ------------------------------------------------------------
consensus_9472#0 GCAATATATCTCCAATTCCCCAAGACCATACAGAGTATGAGTATGATGTCATGATAGGGT 1722
consensus_9472#1 ------------------------------------------------------------
consensus_9472#0 ATGACACAGCAGCTGATTGTGATAACTTTGTTGTAAAATATATTCTGGTGATGAAAAAAA 1782
consensus_9472#1 ------------------------------------------------------------
consensus_9472#0 A 1783
consensus_9472#1 -
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||