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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9476#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1244 fasta sequence
[CCGCGGACGCGTGGGTCACTTCATTGATAGCATTCGATCGGGACGGTACTCGGCGTCGGTCTTGGGAAAAAGTGTGTCGCGAGCGCCTCGTGGAAAGCAGTAGCGTGTGCCAAAAGGATTCGC-AAA--C-CGTGTGACTCGGTGGACTCAAGTGTGAC---AGTGTGCTAGTGGACATTGTTTGCAAGAGAAGAAGGAGACATTTTCGCTTATAAACGAAGTGC-GTTCAATCAGGACATTTTACAGTTGAAAGATAAAACAGTGCAGAAAAGTACACATTCAGCGATGGAGTTCAGAAGCAGCAAAAAGATGGTGATTTCCCTCCGGGTAGTGTTGGTGCTGGTGTGCCTGGTTAGCCTTATTTCACACGCCTCGGCAAGACCGTCGAGCGTGCGGCACAGCAAACAACTGCGTCTCATAGA-TCATCTGCTTCGCAGTAGGGCAGCAGCCGAGAGCAGGAAGCCTCACCATCACAATGCCGACCATCAGCATCGCCGGAGATCGGCAGATTATGAAGATTTCTACGACGCGGATTACAAGCGTGTGCAGCAGTGTTACGAAGATGAGGACATAAACGAGCTTTGCCAGCGCTGTTCGAAGGTGACCAAGTCGTCGCTAGTGTTCCCGATGTGCTGCAACAATGAGGATCACACGATGACCTGGTGCAAAGAGTACGTTTACTAT-GGGATACAGACGTAACCCGGCGAGATGGGTTCACTCTTCCC-GGGGGGAATTCCGGGCATATTTCTCTCGTTCCAAGTTTAGCAGCCACAAGCGCAAAACCTGCA-------CTGTATGACACCCTAGGGGAACACTTACATCCACGATAGTATTTATTATTGATAGTGTTTGCATCATCTCATCGCCATCGGTTATTTATTCACT---AGAAGAAGAAGAAGAAAAAAAGCGAATTGTTCAGCGTTCGTCTCACCCCATCTCGTCTGATATCTCATAGCAAAAAAAGGAAACTGCACGCGTCTGATAAAGTCCTTCAAGCCAGAGCCATCCCCTCCCAATTATTGGAGCTGTGATTGTACATAAGTTATATTGATGTCTTAGTAAATGTGTGTTTCGCACCTAAGGGAAGCAAAAACTGAGGGAGAGAAATTCGAAGGGCGAAGATACTTACCTAGCAGAAGTCACATAGTATTGCAAGAGCAACGGACACACGCGTTTGGTAGCTAGCT--GCAAGGCACGCTGT-GGGCTACGAATAGTTAGAATAATTGCCTTAAAAATAAAGCTTTTTATATATG]
[+] EMBL BM610745 [CCGCGGACGCGTGGGTCACTTCATTGATAGCATTCGATCGGGACGGTACTCGGCGTCGGTCTTGGGAAAAAGTGTGTCGCGAGCGCCTCGTGGAAAGCAGTAGCGTGTGCCAAAAGGATTCGCAAAA CTCGTGTGACTCGGTGGACTCAAGTGTGACTCAAGTGTGCTAGTGGACATTGTTTGCAAGAGAAGAAGGAGACATTTTCGCTTATAAACGAAGTGC GTTCAATCAGGACATTTTACAGTTGTAAGATAAAACAGTGCAGAAAAGTACACATTCAGCGATGGAGTTCAGAAGCAGCAAAAAGATGGTGATTTCCCTCCGGGTAGTGTTGGTGCTGGTGTGCCTGGTTAGCCTTATTTCACACACCTCGGCAAGACCGTCGAGCGTGCGGCACAGCAAACAACTGCGTTTTATAGA TCATCTGCTTCGCAGCAGGGCAGCAGCCGAGAGCAGGAAGGCTCACCATCACAATGCCGACCATCAGCATCGCCGGAGATCGGCAGATTATGAAGATTTCTACGACGCGGATTACAAGCGTGTGCAGCAGTGTTACGAAGACGAGGACATAAACGAGCTTTGCCAG ]
[+] EMBL BM621073 [ ccgcTCACTTCATTGATAGCATTCAATCGGGACGGTACTCGGCGTCGGTCTTGGGAAAAAGTGTGTCGCGAGCGCCTCGTGGAAAGCAGTAGCGTGTGCCAAAAGGATTCGC AAAACC CGTGTGACTCGGTGGACTCAAGTGTGACTCAAGTGTGCTAGTGGACATTGTTTGCAAGAGAAGAAGGAGACATTTTCGCTTATAAACGAAGTGC GTTCAATCAGGACATTTTACAGTTGAAAGATAAAACAGTGCAGAAAAGTACACATTCAGCGATGGAGTTCAGAAGCAGCAAAAAGATGGTGATTTCCCTCCGGGTAGTGTTGGTGCTGGTGTGCCTGGTTAGCCTTATTTCACACGCCTCGGCAAGACCGTCGAGCGTGCGGCACAGCAAACAACTGCGTCTCATAGA TCATCTGCTTCGCAGTAGGGCAGCAGCCGAGAGCAGGAAGGCTCACCATCACAATGCCGACCATCAGCATCGCCGGAGATCAGCAGATTATGAAGATTTCTACGACGCGGATTACAAGCGTGTGCAGCAGTGTTACGAAGACGAGGACATAAACGAGCTTTGCCAGCGCTGCTCGAAGGTGACCAAGTCGTCGCTGGTGTTCCCGATGTGCTGCAACAATGAGGATCACACGATGACCTGGTGCAAAGAGTACGTTTACTAT GGGATACAGACGTAACCCGGCGAGATGGGTTCACTCT ]
[+] EMBL AF283266 [ TCATTGATAGCATTCGATCGGGACGGTACTCGGCRTCGGTCTTGGGAAAAAGTGTGTCGCGAGCGCCTTGTGGAAAGCAGTAGCGTGTGCCAAAAGGATTCGC AAA C CAT TAATTCGGTGGACTCAAGTGTGAC AGTGTGAAAGTGAACATTGTTTGCAAGAGGAGAAGGAGACATTTTCGCTTACAAACGAAGTGC GTTCAATAAGGACATTTTGCAGTTGAAAGATAAAACAGTGCAGAAGAGTACACATTCAGCGATGGAGTTCAAAAGCAGCAAAAAGATGGTGATTTCCCTCCGGGTAGTGTTGGTGCTGGTGTGCCTGGTTAGCCTTATTTCACACGCCTCGGCAAGACCGTCGAGCGTACGGCACAGCAAACAACTGCGTCTCATAGA TCATCTGCTTCGCAGTAGGGCAGCAGCCGAGAGCAGGAAGCCTCACCATCACAATGCCGACCATCAGCATCGCCGGAGATCGGCAGATTATGAAGATTTCTACGACGCGGATTACAAGCGTGTGCAGCAGTGTTACGAAGATGAGGACATAAACGAGCTTTGCCAACGCTGTTCGAAGGTGACCAAGTCGTCGCTAGTGTTCCCGATGTGCTGCAACAATGAGGATCACACGATGACCTGGTGCAAAGAGTACGCTTACTAT GGGATACAGACGTAACCCGGCGAGATGGGTTCACTCTTCCC GGGGGGAATTCCGGGCATATTTCTCTCGTTCCAAGTTTAGCAGCCACAAGCGCAAAACCTGCA CTGTATGACACCCTAGGGGAACACTTACATCCACGATAGTATTTATTATTGATAGTGTTTGCATCATCTCATCGCCATCGGTTATTTATTCACT AGAAGAAGAAGAAGAAAAAAAGCGAATTGTTCAGCGTTCGTCTCACCCCATCTCGTCTGATATCTCATAGC AAAAAAGGAAACTGCACGCGTCTTATATAGTCCTTCAAGCCAGAGCCATCCCCTCCCAATTATTGGAGCTGTGATTGTACATAAGTTATATTGATGTCTTAGTAAATGTGTGTTTCGCACCTAAGGGAAGCAAAAACTGAGGAAGAGAAATTCGAAGGGCGAAGATACTTACCTAGCAGAAGTCACATAGTATTGCGAGAGCAACGGTCGCACGCGTTTGGTAGCTAGCT GCAAGGCACGCTGT GGGCTACGAATAGTTAGAATAATTGCCTTAAAAATAAAGCTTTTTATATATG]
[+] EMBL CNS09EVR [ GATAGCATTCGATCGGGACGGTACTCGGCGTCGGTCTTGGGAAAAAGTGTGTCGCGAGCGCCTTGTGGAAAGCAGTAGCGTGTGCCAAAAGGATTCGC AAA C CAT TAATTCGGTGGACTCAAGTGTGAC AGTGTGAAAGTGAACATTGTTTGCAAGAGGAGAAGGAGACATTTTCGCTTACAAACGAAGTGCAGTTCAATAAGGACATTTTGCAGTTGAAAGATAAAACAGTGCAGAAGAGTACACATTCAGCGATGGAGTTCAAAAGCAGCAAAAAGATGGTGATTTCCCTCCGGGTAGTGTTGGTGCTGGTGTGCCTGGTTAGCCTTATTTCACACGCCTCGGCAAGACCGTCGAGCGTACGGCACAGCAAACAACTGCGTCTCATAGA TCATCTGCTTCGCAGTAGGGCAGCAGCCGAGAGCAGGAAGCCTCACCATCACAATGCCGACCATCAGCATCGCCGGAGATCGGCAGATTATGAAGATTTCTACGACGCGGATTACAAGCGTGTGCAGCAGTGTTACGAAGATGAGGACATAAACGAGCTTTGCCAGCGCTGTTCGAAGGTGACCAAGTCGTCGCTAGTGTTCCCGATGTGCTGCAACAATGAGGATCACACGATGACCTGGTGCAAAGAGTACGTTTACTAT GGGATACAGACGTAACCCGGCGAGATGGGTTCACTCTTCCC GGGGGGAATTCCGGGCATATTTCTCTCGTTCCAAGTTTAGCAGCCACAAGCGCAAAACCTGCA CTGTATGACACCCTAGGGGAACACTTACATCCACGATAGTATTTATTATTGATAGTGTTTGCATCATCTCATCGCCATCGGTTATTTATTCACT AGAAGAAGAAGAAGAAAAAAAGCGAATTGTTCAGCGTTCGTCTCACCCCATCTCGTCTGATATCTCATAGC AAAAAAGGAAACTGCACGCGTCTTATATAGTCCTTCAAGCCAGAGCCATCCCCTCCCAAT ]
[+] EMBL BM646872 [ ccgGGATTCGC AAAACC CGTGTGACTCGGTGGACTCAAGTGTGACTCAAGTGTGCTAGTGGACATTGTTTGCAAGAGAAGAAGGAGACATTTTCGCTTATAAACGAAGTGC GTTCAATCAGGACATTTTACAGTTGAAAGATAAAACAGTGCAGAAAAGTACACATTCAGCGATGGAGTTCAGAAGCAGCAAAAAGATGGTGATTTCCCTCCGGGTAGTGTTGGTGCTGGTGTGCCTGGTTAGCCTTATTTCACACGCCTCGGCAAGACCGTCGAGCGTGCGGCACAGCAAACAACTGCGTCTCATAGA TCATCTGCTTCGCAGTAGGGCAGCAGCCGAGAGCAGGAAGGCTCACCATCACAATGCCGACCATCAGCATCGCCGGAGATCAGCAGATTATGAAGATTTCTACGACGCGGATTACAAGCGTGTGCAGCAGTGTTACGAAGACGAGGACATAAACGAGCTTTGCCAGCGCTGCTCGAAGGTGACCAAGTCGTCGCTGGTGTTCCCGATGTGCTGCAACAATGAGGATCACACGATGACCTGGTGCAAAGAGTACGTTTACTAT GGGATACAGACGTAACCCGGCGAGATGGGTTCACTCTTCTC GGGGGGAATTCCGGGCATATTTCTCTCGTTCCAAGTTTAGCAG ]
[+] EMBL BM608565 [ cCGC AAAACC CGTGTGACTCGGTGGACTCAAGTGTGAC AGTGTGAAAGTGAACATTGTTTGCAAGAGGAGAAGGAGACATTTTCGCTTACAAACGAAGTGC GTTCAATAAGGACATTTTGCAGTTGAAAGATAAAACAGTGCAGAAGAGTACACATTCAGCAATGGAGTTCAGAAGCAGCAAAAAGATGGTGATTTCCCTCCGGGTAGTGTTGGTGCTGGTGTGCCTGGTTAGCCTTATTTCACACGCCTCGGCAAGACCGTCGAGCGTACGGCACAGCAAACAACTGCGTCTCATAGA TCATCTGCTTCGCAGTAGGGCAGCAGCCGAGAGCAGGAAGCCTCACCATCACAATGCCGACCATCAGCATCGCCGGAGATCGGCAGATTATGAAGATTTCTACGACGCGGATTACAAGCGTGTGCAGCAGTGTTACGAAGATGAGGACATAAACGAGCTTTGCCAGCGCTGTTCGAAGGTGACCAAGTCGTCGCTAGTGTTCCCGATGTGCTGCAACAATGAGGATCACACGATGACCTGGTGCAAAGAGTACGTTTACTATGGGGATACAGACGTAACCCGGCGAGATGGGTTCACTCTTCCCGGGGGGGAATTCCGGGCATATTTCTCTCGTTCCAAGTTTACCAG ]
[-] EMBL CNS09EVS [ TCATAGATTCAT TTCTTCGCAGTAGGGCAGCAGCCGAGAGCAGGAAGCCTCACCATCAAAATGCCGACCCTCAGCATCGCCGGAGATCGGCAGATTATGAAGATTTCTACGACGCGGATTACAAGCGTGTGCAGCAGTGTTACGAAGATGAGGACATAAACGAGCTTTGCCAGCGCTGTTCGAAGGTGACCAAGTCGTCGCTAGTGTTCCCGATGTGCTGCAACAATGAGGGTCACACGATGACCTGGTGCAAAGAGTACGTTTACTAT GGGAAACAGACGTAACCCGGCGAGATGGGTTCACTCTTCCC GGGGGGAATTCCGGGCATATTTTTCTCGTTCCAAGTTTAGCAGCCACAAGCGCAAAACCTGCA CTGTATGACACCCTAGGGGAAAACTTACATCCACGATAGTATTTATTATTGATAGTGTTTGCATCATCTCATCGCCATCGGTTATTTATTCACT AGAAGAAGAAGAAGAAAAAAAGCGAATTGTTCAGCGTTCGTCTCACCCCCTCTCGTCTGATTTCTCATAGC AAAAAAGGAAACTGCACGCGTCTTATATAGTCCTTCAAGCCAGAGCCATCCCCTCCCAATTATTGGAGCTGTGATTGTACATAAGTTATATTGATGTCTTAGTAAATGTGTGTTTCGCACCTAAGGGAAGCAAAAACTGAGGAAGAGAAATTCGAAGGGCGAAGATACTTACCTAGCAGAAGTCACATAGTATTGCGAGAGCAACGGTCGCAC ]
[+] EMBL BM581643 [ ccgGGGCAGCAGCCGAGAGCAGGAAGCCTCACCATCACAATGCCGACCATCAGCATCGCCGGAGATCGGCAGATTATGAAGATTTCTACGACGCGGATTACAAGCGTGTGCAGCAGTGTTACGAAGATGAGGACATAAACGAGCTTTGCCAGCGCTGTTCGAAGGTGACCAAGTCGTCGCTAGTGTTCCCGATGTGCTGCAACAATGAGGATCACACGATGACCTGGTGCAAAGAGTACGTTTACTAT GGGATACAGACGTAACCCGGCGAGATGGGTTCACTCTTCCC GGGGGGAATTCCGGGCATATTTCTCTCGTTCCAAGTTTACCAGCCACAAGCGCAAAACCTGCA CTGTATGACACCCTAGGGGAACACTTACATCCACGATAGTATTTATTATTGATAGTGTTTGCATCATCTCATCGCCATTGATTATTTATTCACTAGAAGAAGAAGAAGAAGAAAAAAAGCGAATTGTTCAGCGTTCGTCTCACCCCATCTCGTCTGATATCTCATAGCAAAAAAAGGAAACTGCACGCGTCTGATAAAGTCCTTCAAGCCAGAGCCATCCCCTCCCAATTATTGGAGCTGTGATTGTACATAAGTTATATTGATGTCTTAGTAAATGTGTGTTTCGCACCTAAGGGAAGCAAAAACT ]
[+] EMBL BM579062 [ ccgCATCAGCATCGCCGGAGATCGGCAGATTATGAAGATTTCTACGACGCGGATTACAAGCGTGTGCAGCAGTGTTACGAAGATGAGGACATAAACGAGCTTTGCCAGCGCTGTTCGAAGGTGACCAAGTCGTCGCTAGTGTTCCCGATGTGCTGCAACAATGAGGATCACACGATGACCTGGTGCAAAGAGTACGTTTACTAT GGGATACAGACGTAACCCGGCGAGATGGGTTCACTCTTCCC GGGGGGAATTCCGGGCATATTTCTCTCGTTCCAAGTTTACCAGCCACAAGCGCAAAACCTGCA CTGTATGACACCCTAGGGGAACACTTACATCCACGATAGTATTTATTATTGATAGTGTTTGCATCATCTCATCGCCATTGATTATTTATTCACTAGAAGAAGAAGAAGAAGAAAAAAAGCGAATTGTTCAGCGTTCGTCTCACCCCATCTCGTCTGATATCTCATAGCAAAAAAAGGAAACTGCACGCGTCTGATAAAGTCCTTCAAGCCAGAGCCATCCCCTCCCAATTATTGGAGCTGTGATTGTACATAAGTTATATTGATGTCTTAGTAAATGTGTGTTTCGCACCTAAGGGAAGCAAAAACTGAGGGAGAGAAATTCGAAGGGCGAAGATACTTACCTAGCAGAAGTCACATAGTATTGCAAGAG ]
[+] EMBL BX609391 [ GCGTGTGCAGCAGTGTTACGAAGACGAGGACATAAACGAGCTTTGCCAGCGCTGCTCGAAGGTGACCAAGTCGTCGCTGGTGTTCCCGATGTGCTGCAACAATGAGGATCACACGATGACCTGGTGCAAAGAGTACGTTTACTAT GGGATACAGACGTAACCCGGCGAGATGGGTTCACTCTTCCC GGGGGGAATTCCGGGCATATTTCTCTCGTTCCAAGTTTAGCAGCCACAAGCGCAAAACCTGCACCTGCACCTGTATGACACCCTAGGGGAAAACTTACATCCACGATAGTATTTATTATTGATAGTGTTTGCATCATCTCATCGCCATCGGTTATTTATTCACT AGAAGAAGAAGAAAAAAAGAAGCGAATTGTTCAGCGTTCGTCTCACCTCATCTCGTCTGGTATCTCAAAGCAAAAAAAGGAAACTGCACGCGTCTGATAAAGTCCTTCAAGCCAGAGCCATCCCCTCCCAATTATTGGAGCTGTGATTGTACATAAGTTATATTGATGTCTTAGTAAATGTGTGTTTCGCACCTAAGGGAAGCAAAAACTGAGGGAGAGAAATTCGAAGGGCGAAGATACTTACCTAGCAGAAGTCACATAGTATTGCAAGAGCAACGGACACACGCGTTTGGTAGCTAGCT GCAAGGCAAGCTGT GGGCTACGAATAGTTAGAATAATTGCCTTAAAAATAAAGCTTTTT ]
[+] EMBL BM639793 [ ccgAAACGAGCTTTGCCAGCGCTGTTCGAAGGTGACCAAGTCGTCGCTAGTGTTCCCGATGTGCTGCAACAATGAGGATCACACGATGACCTGGTGCAAAGAGTACGTTTACTAT GGGATACAGACGTAACCCGGCGAGATGGGTTCACTCTTCCC GGGGGGAATTCCGGGCATATTTCTCTCGTTCCAAGTTTACCAGCCACAAGCGCAAAACCTGCA CTGTATGACACCCTAGGGGAACACTTACATCCACGATAGTATTTATTATTGATAGTGTTTGCATCATCTCATCGCCATTGATTATTTATTCACTAGAAGAAGAAGAAGAAGAAAAAAAGCGAATTGTTCAGCGTTCGTCTCACCCCATCTCGTCTGATATCTCATAGCAAAAAAAGGAAACTGCACGCGTCTGATAAAGTCCTTCAAGCCAGAGCCATCCCCTCCCAATTATTGGAGCTGTGATTGTACATAAGTTATATTGATGTCTTAGTAAATGTGTGTTTCGCACCTAAGGGAAGCAAAAACTGAGGGAGAGAAATTCGAAGGGCGAAGATACTTACCTAGCAGAAGTCACATAGTATTGCAAGAGCAACGGACACACGCG TTGGTAGCTAGCTGAGCAAGGCACGCTGTGGGGCCACGAATAG ]
[+] EMBL BM645754 [ ccgGTTCGAAGGTGACCAAGTCGTCGCTAGTGTTCCCGATGTGCTGCAACAATGAGGATCACACGATGACCTGGTGCAAAGAGTACGTTTACTAT GGGATACAGACGTAACCCGGCGAGATGGGTTCACTCTTCCC GGGGGGAATTCCGGGCATATTTCTCTCGTTCCAAGTTTACCAGCCACAAGCGCAAAACCTGCA CTGTATGACACCCTAGGGGAACACTTACATCCACGATAGTATTTATTATTGATAGTGTTTGCATCATCTCATCGCCATTGATTATTTATTCACTAGAAGAAGAAGAAGAAGAAAAAAAGCGAATTGTTCAGCGTTCGTCTCACCCCATCTCGTCTGATATCTCATAGCAAAAAAAGGAAACTGCACGCGTCTGATAAAGTCCTTCAAGCCAGAGCCATCCCCTCCCAATTATTGGAGCTGTGATTGTACATAAGTTATATTGATGTCTTAGTAAATGTGTGTTTCGCACCTAAGGGAAGCAAAAACTGAGGGAGAGAAATTCGAAGGGCGAAGATACTTACCTAGCAGAAGTCACATAGTATTGCAAGAGCAACGGACACACGCG TTGGTAGCTAGCTGAGCAAGGCACGCTGT GGGCCACGAAT ]
consensusID : consensus_9476#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 652 fasta sequence
[CCGCGGACGCGTGGGTTTTTCCGTAATCATCAACAGGAGGACATAAACGAGCTTTGCCAGCGCTGTTCGAAGGTGACCAAGTCGTCGCTAGTGTTCCCGATGTGCTGCAACAATGAGGATCACACGATGACCTGGTGCAAAGAGTACGTTTACTATGGGATACAGACGTAACCCGGCGAGATGGGTTCACTCTTCCCGGGGGGAATTCCGGGCATATTTCTCTCGTTCCAAGTTTACCAGCCACAAGCGCAAAACCTGCACTGTATGACACCCTAGGGGAACACTTACATCCACGATAGTATTTATTATTGATAGTGTTTGCATCATCTCATCGCCATTGATTATTTATTCACTAGAAGAAGAAGAAGAAGAAAAAAAGCGAATTGTTCAGCGTTCGTCTCACCCCATCTCGTCTGATATCTCATAGCAAAAAAAGGAAACTGCACGCGTCTGATAAAGTCCTTCAAGCCAGAGCCATCCCCTCCCAATTATTGGAGCTGTGATTGTACATAAGTTATATTGATGTCTTAGTAAATGTGTGTTTCGCACCTAAGGGAAGCAAAAACTGAGGGAGAGAAATTCGAAGGGCGAAGATACTTACCTAGCAGAAGTCACATAGTATTGCAAGAGCAACGAGACACACGCGTTGAGT]
[+] EMBL BM598091 [CCGCGGACGCGTGGGTTTTTCCGTAATCATCAACAGGAGGACATAAACGAGCTTTGCCAGCGCTGTTCGAAGGTGACCAAGTCGTCGCTAGTGTTCCCGATGTGCTGCAACAATGAGGATCACACGATGACCTGGTGCAAAGAGTACGTTTACTATGGGATACAGACGTAACCCGGCGAGATGGGTTCACTCTTCCCGGGGGGAATTCCGGGCATATTTCTCTCGTTCCAAGTTTACCAGCCACAAGCGCAAAACCTGCACTGTATGACACCCTAGGGGAACACTTACATCCACGATAGTATTTATTATTGATAGTGTTTGCATCATCTCATCGCCATTGATTATTTATTCACTAGAAGAAGAAGAAGAAGAAAAAAAGCGAATTGTTCAGCGTTCGTCTCACCCCATCTCGTCTGATATCTCATAGCAAAAAAAGGAAACTGCACGCGTCTGATAAAGTCCTTCAAGCCAGAGCCATCCCCTCCCAATTATTGGAGCTGTGATTGTACATAAGTTATATTGATGTCTTAGTAAATGTGTGTTTCGCACCTAAGGGAAGCAAAAACTGAGGGAGAGAAATTCGAAGGGCGAAGATACTTACCTAGCAGAAGTCACATAGTATTGCAAGAGCAACGAGACACACGCGTTGAGT]
consensusID : consensus_9476#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 583 fasta sequence
[TCCCCCCCAGGTTACATTGATAGCATTCGATCGGGACGGTACTCGCGCGTCGGTCTTGGGAAAAAGTGTGACGCGAGCGCCTGGTGGAAAGCAATAGCGTGTGTCAAAAGGATTCGCAAAACCCGTGTGACTCGGTGGACTCAAGTGTGACTCAAGTGTGCTAGTGGACATTGTTTGCACAGAGGAGAAGGAGACATTTTCGCTTACAAACGAAGTGCGTTCAATAACGGACATTCTTGCAGTTGAAAGATAAAACAGCTGCAGAAGAGTACACATTCAGCGATGGAGTTCAAAAGCAGCAAAAAGATGGTGATTTCCCTCCGGGGTAGTGTTGGTGCTGGTGTGCCTGGTTAGCCTTATTTCACACGCCTCGGCAAGACCGTCGAGCGTGCGGCACAGCAAACAACTGCGTCTTATAGATCATCTGCTTCGCAGCAGGACAGCAGCCGAGAGCAGGAAGCCTCACCATCACAATGCCGACCATCAGCATCGCCGGAGATCGGCAGATTATGAACGCATTTCTACGACGCGGATTACAAACGTGTGCAGCAGTGTTACGAAGACGAGGACACTAAACGAGCTT]
[+] EMBL AL934499 [TCCCCCCCAGGTTACATTGATAGCATTCGATCGGGACGGTACTCGCGCGTCGGTCTTGGGAAAAAGTGTGACGCGAGCGCCTGGTGGAAAGCAATAGCGTGTGTCAAAAGGATTCGCAAAACCCGTGTGACTCGGTGGACTCAAGTGTGACTCAAGTGTGCTAGTGGACATTGTTTGCACAGAGGAGAAGGAGACATTTTCGCTTACAAACGAAGTGCGTTCAATAACGGACATTCTTGCAGTTGAAAGATAAAACAGCTGCAGAAGAGTACACATTCAGCGATGGAGTTCAAAAGCAGCAAAAAGATGGTGATTTCCCTCCGGGGTAGTGTTGGTGCTGGTGTGCCTGGTTAGCCTTATTTCACACGCCTCGGCAAGACCGTCGAGCGTGCGGCACAGCAAACAACTGCGTCTTATAGATCATCTGCTTCGCAGCAGGACAGCAGCCGAGAGCAGGAAGCCTCACCATCACAATGCCGACCATCAGCATCGCCGGAGATCGGCAGATTATGAACGCATTTCTACGACGCGGATTACAAACGTGTGCAGCAGTGTTACGAAGACGAGGACACTAAACGAGCTT]
consensusID : consensus_9476#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 513 fasta sequence
[GCCGAGCGAAAAGTAGCGAAGGAAGGCTCACCATCACAATGCCGACCATCAGCATCGCCGGAGATCGGCAGATTATGAAGATTTCTACGACGCGGATTACAAGCGTGTGCAGCAGTGTTACGAAGACGAGGACATAAACGAGCTTTGCCAGCGCTGCTCGAAGGTGACCAAGTCGTCGCTGGTGTTCCCGATGTGCTGCAACAATGAGGATCACACGATGACCTGGTGCAAAGAGTACGTTTACTATGGGATACAGACGTAACCCGGCGAGATGGGTTCACTCTTCCCGGGGGGAATTCCGGGCATATTTCTCTCGTTCCAAGTTTAGCAGCCACAAGCGCAAAACCTGCACCTGCACCTGTATGACACCCTAGGGGAAAACTTACATCCACGATAGTATTTATTATTGATAGTGTTTGCATCATCTCATCGCCATCGGTTATTTATTCACTAGAAGAAGAAGAAAAAAAGAAGCGAATTGTTCAGCGTTCGTCTCACCTCATCTCGTCTGGT]
[+] EMBL BX617637 [GCCGAGCGAAAAGTAGCGAAGGAAGGCTCACCATCACAATGCCGACCATCAGCATCGCCGGAGATCGGCAGATTATGAAGATTTCTACGACGCGGATTACAAGCGTGTGCAGCAGTGTTACGAAGACGAGGACATAAACGAGCTTTGCCAGCGCTGCTCGAAGGTGACCAAGTCGTCGCTGGTGTTCCCGATGTGCTGCAACAATGAGGATCACACGATGACCTGGTGCAAAGAGTACGTTTACTATGGGATACAGACGTAACCCGGCGAGATGGGTTCACTCTTCCCGGGGGGAATTCCGGGCATATTTCTCTCGTTCCAAGTTTAGCAGCCACAAGCGCAAAACCTGCACCTGCACCTGTATGACACCCTAGGGGAAAACTTACATCCACGATAGTATTTATTATTGATAGTGTTTGCATCATCTCATCGCCATCGGTTATTTATTCACTAGAAGAAGAAGAAAAAAAGAAGCGAATTGTTCAGCGTTCGTCTCACCTCATCTCGTCTGGT]
[+] EMBL BX610209 [ GCATCGCCGGAGATCGGCAGATTATGAAGATTTCTACGACGCGGATTACAAGCGTGTGCAGCAGTGTTACGAAGACGAGGACATAAACGAGCTTTGCCAGCGCTGCTCGAAGGTGACCAAGTCGTCGCTGGTGTTCCCGATGTGCTGCAACAATGAGGATCACACGATGACCTGGTGCAAAGAGTACGTTTACTATGGGATACAGACGTAACCCGGCGAGATGGGTTCACTCTTCCCGGGGGGAATTCCGGGCATATTTCTCTCGTTCCAAGTTTAGCAGCCACAAGCGCAAAACCTGCACCTGCACCTGTATGACACCCTAGGGGAAAACTTAC ]
[+] EMBL BX609436 [ CGGAGATCGGCAGATTATGAAGATTTCTACGAAGCGGATTACAAGCGTGTGCAGCAGTGTTACGAAGACGAGGACATAAACGAGCTTTGCCAGCGCTGCTCGAAGGTGACCAAGTCGTCGCTGGTGTTCCCGATGTGCTGCAACAATGAGGATCACACGATGACCTGGTGCAAAGAGTACGTTTACTATGGGATACAGACGTAACCCGGCGAGATGGGTTCACTCTTCCCGGGGGGAATTCCGGGCATATTTCTCTCGTTCCAAGTTTAGCAGCCACAAGCGCAAAATCTGCACCTGCACCTGTATGACACCCTAGGGGAAAACTTACATCCACGATAGTATTTATTATTGATATTGTTTGCATCATCTCATCG ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9476#1 ------------------------------------------------------------
consensus_9476#3 ------------------------------------------------------------
consensus_9476#0 CCGCGGACGCGTGGGTCACTTCATTGATAGCATTCGATCGGGACGGTACTCGGCGTCGGT 60
consensus_9476#2 ------------------------------------------------------------
consensus_9476#1 ------------------------------------------------------------
consensus_9476#3 ------------------------------------------------------------
consensus_9476#0 CTTGGGAAAAAGTGTGTCGCGAGCGCCTCGTGGAAAGCAGTAGCGTGTGCCAAAAGGATT 120
consensus_9476#2 ------------------------------------------------------------
consensus_9476#1 ------------------------------------------------------------
consensus_9476#3 ------------------------------------------------------------
consensus_9476#0 CGCAAACCGTGTGACTCGGTGGACTCAAGTGTGACAGTGTGCTAGTGGACATTGTTTGCA 180
consensus_9476#2 ------------------------------------------------------------
consensus_9476#1 ------------------------------------------------------------
consensus_9476#3 ------------------------------------------------------------
consensus_9476#0 AGAGAAGAAGGAGACATTTTCGCTTATAAACGAAGTGCGTTCAATCAGGACATTTTACAG 240
consensus_9476#2 ------------------------------------------------------------
consensus_9476#1 ------------------------------------------------------------
consensus_9476#3 ------------------------------------------------------------
consensus_9476#0 TTGAAAGATAAAACAGTGCAGAAAAGTACACATTCAGCGATGGAGTTCAGAAGCAGCAAA 300
consensus_9476#2 ------------------------------------------------------------
consensus_9476#1 ------------------------------------------------------------
consensus_9476#3 ------------------------------------------------------------
consensus_9476#0 AAGATGGTGATTTCCCTCCGGGTAGTGTTGGTGCTGGTGTGCCTGGTTAGCCTTATTTCA 360
consensus_9476#2 ------------------------------------------------------------
consensus_9476#1 ------------------------------------------------------------
consensus_9476#3 ------------------------------------------------------------
consensus_9476#0 CACGCCTCGGCAAGACCGTCGAGCGTGCGGCACAGCAAACAACTGCGTCTCATAGATCAT 420
consensus_9476#2 ------------------------------------------------------------
consensus_9476#1 ------------------------------------------------------------
consensus_9476#3 -----------GCCGAGCGAAAAGTAGCGAAGGAAGGCTCACCATCACAATGCCGACCAT 49
consensus_9476#0 CTGCTTCGCAGTAGGGCAGCAGCCGAGAGCAGGAAGCCTCACCATCACAATGCCGACCAT 480
consensus_9476#2 ------------------------------------------------------------
consensus_9476#1 ----------------------------------------CCGCGGACGCGTGGGTTTTT 20
consensus_9476#3 CAGCATCGCCGGAGATCGGCAGATTATGAAGATTTCTACGACGCGGATTACAAGCGTGTG 109
consensus_9476#0 CAGCATCGCCGGAGATCGGCAGATTATGAAGATTTCTACGACGCGGATTACAAGCGTGTG 540
consensus_9476#2 -------------------------------------------------------TCCCC 5
consensus_9476#1 CCGTAAT--CATCAACAGGAGGACATAAACGAGCTTTGCCAGCGCTGTTCGAAGGTGACC 78
consensus_9476#3 CAGCAGTGTTACGAAGACGAGGACATAAACGAGCTTTGCCAGCGCTGCTCGAAGGTGACC 169
consensus_9476#0 CAGCAGTGTTACGAAGATGAGGACATAAACGAGCTTTGCCAGCGCTGTTCGAAGGTGACC 600
consensus_9476#2 CCCAGGTTACATTGATAGCATTCGATCGGGACGGTACTCGCGCGTCGGTCTTGGGAAA-- 63
* * * * * * ** * * * *** * ** ** *
consensus_9476#1 AAGTCGTCGCTAGTGTTCCCGATGTGCTGCAACAATGAGGATCACACGATGACCTGGTGC 138
consensus_9476#3 AAGTCGTCGCTGGTGTTCCCGATGTGCTGCAACAATGAGGATCACACGATGACCTGGTGC 229
consensus_9476#0 AAGTCGTCGCTAGTGTTCCCGATGTGCTGCAACAATGAGGATCACACGATGACCTGGTGC 660
consensus_9476#2 AAGT-GTGACGCGAGCGCCTGGTGGAAAGCAATAGCGTGTGTCAAAAG--GATTCG---C 117
**** ** * * * ** * ** **** * * * *** * * ** * *
consensus_9476#1 AAAGAGTACGTTTACTATGGGATACAGACGTAACCCG-GCGAGATGG-GTTCACTCTTCC 196
consensus_9476#3 AAAGAGTACGTTTACTATGGGATACAGACGTAACCCG-GCGAGATGG-GTTCACTCTTCC 287
consensus_9476#0 AAAGAGTACGTTTACTATGGGATACAGACGTAACCCG-GCGAGATGG-GTTCACTCTTCC 718
consensus_9476#2 AAAACCCGTGTGACTCGGTGGACTCAAGTGTGACTCAAGTGTGCTAGTGGACATTGTTTG 177
*** ** *** ** ** ** * * * * * * * ** * **
consensus_9476#1 CG-GGGGGAATTCCGGGCATATTT-CTCTCGTTCCAAGTTTACCAGCCACAAGCGCAAAA 254
consensus_9476#3 CG-GGGGGAATTCCGGGCATATTT-CTCTCGTTCCAAGTTTAGCAGCCACAAGCGCAAAA 345
consensus_9476#0 CG-GGGGGAATTCCGGGCATATTT-CTCTCGTTCCAAGTTTAGCAGCCACAAGCGCAAAA 776
consensus_9476#2 CACAGAGGAGAAGGAGACATTTTCGCTTACAAACGAAGTGCGTT--CAATAACGGACATT 235
* * *** * *** ** ** * * **** * * ** * *
consensus_9476#1 CCTGCAC-------TGTATGACACCCTAGGGGAACACTTACATCCA-CGATAGTATTTAT 306
consensus_9476#3 CCTGCACCTGCACCTGTATGACACCCTAGGGGAAAACTTACATCCA-CGATAGTATTTAT 404
consensus_9476#0 CCTGCAC-------TGTATGACACCCTAGGGGAACACTTACATCCA-CGATAGTATTTAT 828
consensus_9476#2 CTTGCAGTTGAAA-GATAAAACAGC-TGCAGAAGAGTACACATTCAGCGATGGAGTTCAA 293
* **** ** *** * * * * **** ** **** * ** *
consensus_9476#1 TATTGATAGT--GTTTGCATCATCTCATCGCCATTGATTATTTATTCACTAGAAGAAGAA 364
consensus_9476#3 TATTGATAGT--GTTTGCATCATCTCATCGCCATCGGTTATTTATTCACTAGAAGAAGAA 462
consensus_9476#0 TATTGATAGT--GTTTGCATCATCTCATCGCCATCGGTTATTTATTCACTAGAAGAAGAA 886
consensus_9476#2 AAGCAGCAAAAAGATGGTGATTTCCCTCCGGGGTAGTGTTGGTGCTGGTGTGCCTGGTTA 353
* * * * * ** * ** * * * * * * *
consensus_9476#1 GAAGAAGAAAAAAAGC-------GAATTGTTCAGCGTTCGTCTCACCCCATCTCGTCTGA 417
consensus_9476#3 GAAAAA---AAGAAGC-------GAATTGTTCAGCGTTCGTCTCACCTCATCTCGTCTGG 512
consensus_9476#0 GAAGAA---AAAAAGC-------GAATTGTTCAGCGTTCGTCTCACCCCATCTCGTCTGA 936
consensus_9476#2 GCCTTATTTCACACGCCTCGGCAAGACCGTCGAGCGTGCGGCACAGCAAA---CAACTG- 409
* * * * ** * ** ***** ** * ** * * * ***
consensus_9476#1 TATCTCATAGCAAAAAAAGGAAACTGCACGCGTCTGATAAAGTCCTTCAAGCCAGAGCCA 477
consensus_9476#3 T----------------------------------------------------------- 513
consensus_9476#0 TATCTCATAGCAAAAAAAGGAAACTGCACGCGTCTGATAAAGTCCTTCAAGCCAGAGCCA 996
consensus_9476#2 CGTCTTATAGATCATCTGCTTCGCAGCAGGACAGCAGCCGAGAGCAGGAAGCCTCACCAT 469
consensus_9476#1 TCCCCTCCCAATTATTGGAGCTGTGATTGTACATAAGTTATATTGATGTCTTAGTA-AAT 536
consensus_9476#3 ------------------------------------------------------------
consensus_9476#0 TCCCCTCCCAATTATTGGAGCTGTGATTGTACATAAGTTATATTGATGTCTTAGTA-AAT 1055
consensus_9476#2 CACAATGCCGACCATCAGCATCGCCGGAGATCGGCAGAT-TATGAACGCATTTCTACGAC 528
consensus_9476#1 GTGTGTTTCGCACCTAAGGGAAGCAAAAACTGAGGGAGAGAAATTCGAAGGGCGAAGATA 596
consensus_9476#3 ------------------------------------------------------------
consensus_9476#0 GTGTGTTTCGCACCTAAGGGAAGCAAAAACTGAGGGAGAGAAATTCGAAGGGCGAAGATA 1115
consensus_9476#2 GCGGATTACAAACGTGTGCAGCAGTGTTACGAAGACGAGGACACTAAACGAGCTT----- 583
consensus_9476#1 CTTACCTAGCAGAAGTCACATAGTATTGCAAGAGCAACGAGACACACGCGTTGAGT---- 652
consensus_9476#3 ------------------------------------------------------------
consensus_9476#0 CTTACCTAGCAGAAGTCACATAGTATTGCAAGAGCAACG-GACACACGCGTTTGGTAGCT 1174
consensus_9476#2 ------------------------------------------------------------
consensus_9476#1 ------------------------------------------------------------
consensus_9476#3 ------------------------------------------------------------
consensus_9476#0 AGCTGCAAGGCACGCTGTGGGCTACGAATAGTTAGAATAATTGCCTTAAAAATAAAGCTT 1234
consensus_9476#2 ------------------------------------------------------------
consensus_9476#1 ----------
consensus_9476#3 ----------
consensus_9476#0 TTTATATATG 1244
consensus_9476#2 ----------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||