cluster # 9478

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Anopheles gambiae
cluster # 9478 cluster # 9478 Sequences # 17 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9478#0 length = 1785 sequences # 16

consensus_9478#1 length = 512 sequences # 1

consensusID : consensus_9478#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 16
consensus length = 1785
fasta sequence

                              [TTTTTTTTGGTTTTAAACGCTGTCTTGCGGAAATTTATTTAACTATATAGATGTGTTCTGCACAATCTCTCCATTTCTCGCTTCTGGCTACTGCCGCTGTCTTTCATCCTTTTCGACTTTCGTGATCCAAAGTGTGGCTTCCGCCCGAAACTTCTTCAGTCAAGTTATGCTACCTTACAAACTAAGCTTTCGCTTCGAAACGAATCCGCATTGCCTTACAATGTATGGATTAATGGTTCCG-TAATCAAATATAATGTCGTCACTTTTTGCCCTTCCCTTCGCACCTCGACCCAACCAACATAGCTTCTTACACAGCTCTATGCGCCTGTGTTTGCG-CG-TTCTTGCAAGCTCGATACAATGCAAGGACAGGAGGAATGGTTACTGGTAGAAAACGAGTGACCAGTCCGTATCCATGGTAATCCAGCGTGGTTGCGTGGTATTGCAGTACCAGCAGATGAGAAGATGAAACACAGCATAGGGAAGGTTGTTTGCTACGCGGGGTGGATTTTCGAGCTAGCAGCCCGGAAGCGTTCGAAAGTAGAGGGCCCCAGGCAAGGCGCTCGAGAGAGAAAACAAAAATTATGGTTGGTTTAAAAATAAAACATGTCAAATACTTCCAATCTTACTACAACCAGTAAAATAGCAAATTGGTCACGCATCGGGGGCCGCTCTCCGTTCAGTCCATTCCCCCCC-TTCAGAGGCTCAGTGTGGCCGGGGTGGCGGCATCAGCTCGGCATCCGATCGAAACCCGTCCTTCGCGATCAGGGTCAGCAGCCGATCCTCGGTAACCGGATTGCGGATGCTTTCCCACACGTTCTTGGCCGTTTCGTAGCTGTTGGGGAACGACTTGTCCGTGCGCTCGCGCATCAGCACCCAGCCATTTTCGAACTTGCACTCGATGATCTTGTTG-TT-CAGCTTGCGCAGCTCCTTCGTCAGCTTGATCTCGCCGTAGCTGTGCTCCATGCCGCCGAC-GTACAGCAGCCCCTTCTTGGTCGGCAGCATGCCCTGCCCGGTTTCCTCCTTTATCACCAGCCGAAAGTCGATCGAGTTCA-TG-TGA-TGCGGTTTCCACTTAAGTACAC-GC-GGCAGACGCCCGACTCGTACGGATCGATCGAGGGCTGAAAGATCAGCCCGTCCGGCT-CGTGCCCCAGCCCTTTGGTGAACTTTGGCCCGAGCAGTGCCCGCGACTGCATAATGTCCCAGAACTGTTTCAACCGCACGCCGAACGGTTCGCTCTCCCGGTCCAGCCTGCCCTGCCGTATCGCGTTGGTGCGCGGCTGTATGATTTCGCGATCGATCAGGCCCAACCGGTCGGGGAAGAACCGCTG-TTGCGCACCTCCCGATTGTGCAGGTAGATCACATCGTACACGAGATAGCGGGGGATTTTCTTCCCCTCGCCGTAATTGTCCAGCACCATCTCCCCGTCGACAAGCGTGTCGGTGATGTGGACGGACGTGTCCTTCAGGGTGGGGAACCGGATACCCTCCGCCTTGAACACCGAGTTGTCTCGGTCGAGGAAGTAAATCTCGCCCTCGCGATGGATCAGCATCATGTAGCGGGTGCCATCCGCCTTCCAGGACACCCGGTACGGCATCTCCTTGAGGTAGCGTATGTTATGCATGTCCATCGAGACGGGCTGCGCGCCGGCAAAGCCCTGCAGCTTGCTGCCGCACATCTCGCGCACTCGCTCCTGCAGCTTGGCAATCAGGGCTTCGTCCCGCACCAACGTCACGCCCGGCACGTCCTCCATGAAGACTGCGTTCGGGTTGTACGAGGCTCGCTTGAAGC]

[+] EMBL AGA284061            [TTTTTTTTGGTTTTAAACGCTGTCTTGCGGAAATTTATTTAACTATATAGATGTGTTCTGCACAATCTCTCCATTTCTCGCTTCTGGCTACTGCCGCTGTCTTTCATCCTTTTCGACTTTCGTGATCCAAAGTGTGGCTTCCGCCCGAAACTTCTTCAGTCAAGTTATGCTACCTTACAAACTAAGCTTTCGCTTCGAAACGAATCCGCATTGCCTTACAATGTATGGATTAATGGTTCCG TAATCAAATATAATGTCGTCACTTTTTGCCCTTCCCTTCGCACCTCGACCCAACCAACATAGCTTCTTACACAGCTCTATGCGCCTGTGTTTGCG CG TTCTTGCAAGCTCGATACAATGCAAGGACAGGAGGAATGGTTACTGGTAAAAAAaaaaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS08XFD             [          TTTTAAACGCTGTCTTGCGGAAATTTATTTAACTATATAGATGTGTTCTGCACAATCTCTCCATTTCTCGCTTCTGGCTACTGCCGCTGTCTTTCATCCTTTTCGACTTTCGTGATCCAAAGTGTGGCTTCCGCCCGAAACTTCTTCAGTCAAGTTATGCTACCTTACAAACTAAGCTTTCGCTTCGAAACGAATCCGCATTGCCTTACAATGTATGGATTAATGGTTCCGCTAATCAAATATAATGTCGTCACTTTTTGCCCTTCCCTTCGCACCTCGACCCAACCAACATAGCTTCTTACACAGCTCTATGCGCCTGTGTTTGCGCCGCTTCTTGCAAGCTCGATAaca                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL AGA285357            [                         TGCGGAAATTTATTTAACTATTTAGATGTGTTCTGCACAATCTCTCCATTTCTCGCTTCTGGCTACTGCCGCTGTCTTTCATCCTTTTCGACTTTCGTGATCCAAAGTGTGGCTTCCGCCCGAAACTTCTTCAGTCAAGTTATGCTACCTTACAAACTAAGCTTTCGCTTCGAAACGAATCCGCATTGCCTTACAATGTATGGATTAATGGTTCCG TAATCAAATATAATGTCGTCACTTTTTGCCCTTCCCTTCGCACCTCGACCCAACCAACATAGCTTCTTACACAGCTCTATGCGCCTGTGTTTGCG CG TTCTTGCAAGCTCGATACAATGCAAGGACAGGAGGAATGGTTACTGGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CNS08VDC             [                         TGCGGAAATTTATTTAACTATATAGATGTGTTCTGCACAATCTCTCCATTTCTCGCTTCTGGCTACTGCCGCTGTCTTTCATCCTTTTCGACTTTCGTGATCCAAAGTGTGGCTTCCGCCCGAAACTTCTTCAGTCAAGTTATGCTACCTTACAAACTAAGCTTTCGCTTCGAAACGAATCCGCATTGCCTTACAATGTATGGATTAATGGTTCCG TAATCAAATATAATGTCGTCACTTTTTGCCCTTCCCTTCGCACCTCGACCCAACCAACATAGCTTCTTACACAGCTCTATGCGCCTGTGTTTGCG CG TTCTTGCAAGCTCGATACAATGCAAGGACAGGAGGAATGGTTACTGGTAGAAAACGAGTGACCAGTCCGTATCCATGGTAATCCAGCGTGGTTGCGTGGTATTGCAGTACCAGCAGATGAGAAGATGAAACACAGCATAGGGAAGGTTGTTTGCTACGCGGGGTGGATTTTCGAGCTAGCAGCCCGGAAGCGTTCGAAAGTAGAGGGCCCCAGGCAAGGCGCTCGAGAGAGAAAACAAAAATTATGGTTGGTTTAAAAATAAAACATGTCAAATACTTCCAATCTTACTACAACCAGTAAAATAGCAAATTGGTCACGCATCGGGGGCCGCTCTCCGTTCAGTCCATTCCCCCCC TTCAGAGGCTCAGTGTGGCCGGGGTGGCGGCATCAGCTCGGCATCCGATCGAAACCCGTCCTTCGCGATCAGGGTCAGCAGCCGATCCTCGGTAACCGGATTGCGGATGCTTTCCCACACGTTCTTGGCCGTTTCGTAGCTGTTGGGGAACGACTTGTCCGTGCGCTCGCGCATCAGCACCCAGCCATTTTCGAACTTGCACTCGATGATCTTGTTG TT CAGCTTGCGCATC CTTTCGTCAGCTTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CNS090AL             [                           CGGAAATTTATTTAACTATATAGATGTGTTCTGCACAATCTCTCCATTTCTCGCTTCTGGCTACTGCCGCTGTCTTTCATCCTTTTCGACTTTCGTGATCCAAAGTGTGGCTTCCGCCCGAAACTTCTTCAGTCAAGTTATGCTACCTTACAAACTAAGCTTTCGCTTCGAAACGAATCCGCATTGCCTTACAATGTATGGATTAATGGTTCCG TAATCAAATATAATGTCGTCACTTTTTGCCCTTCCCTTCGCACCTCGACCCAACCAACATAGCTTCTTACACAGCTCTATGCGCCTGTGTTTGCG CG TTCTTGCAAGCTCGATACAATGCAAGGACAGGAGGAATGGTTACTGGTAGAAAACGAGTTACCAGTCCGTATCCATGGTAATCCAGCGTGGTTGCGTGGTATTGCAGTACCAGCAGATGAGAAGATGAAACACAGCATAGGGAAGGTTGTTTGCTACGCGGGGTGGATTTTCGAGCTAGCAGCCCGGAAGCGTTCGAAAGTAGAGGGCCCCAGGCAAGGCGCTCGAGAGAGAAAACAAAAATTATGGTTGGTTTAAAAATAAAACATGTTAAATACTTCCAATCTTACTACAACCAGTTAAATAGCAAATTGGTCACGCATCGGGGGCCGCTCTCCGTTCAGTCCATTCCCCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS08I4J             [                             GAAATTTATTTAACTATATAGATGTGTTCTGCACAATCTCTCCATTTCTCGCTTCTGGCTACTGCCGCTGTCTTTCATCCTTTTCGACTTTCGTGATCCAAAGTGTGGCTTCCGCCCGAAACTTCTTCAGTCAAGTTATGCTACCTTACAAACTAAGCTTTCGCTTCGAAACGAATCCGCATTGCCTTACAATGTATGGATTAATGGTTCCG TAATCAAATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CNS097NB             [                             ggAATTTATTTAACTATATAGATGTGTTCTGCACAATCTCTCCATTTCTCGCTTCTGGCTACTGCCGCTGTCTTTCGTCCTTTTCGACTTTCGTGATCCAAAGTGTTGCTTCCGACCGAAACTTCTTCAGTCAAGTTATGCTACCTTACAAACTAAGCTTTCGCTTCGAAACGAATCCGCATTGCCTTACAATGTATGGATTAATGGTTCCG TAATCAAATATAATGTCGTCACTTTTTGCCCTTCCCTTCGCACCTCGGCCCAACTAACGTAGCTTCTTACACAGCTCTAGGCGCCTGTGTTTGCG CG TTCTTGCAAGCTCGATACAATGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CNS08CNT             [                                ATTTATTTAACTATATAGATGTGTTCTGCACAATCTCTCCATTTCTCGCTTCTGGCTACTGCCGCTGTCTTTCATCCTTTTCGACTTTCGTGATCCAAAGTGTGGCTTCCGCCCGAAACTTCTTCAGTCAAGTTATGCTACCTTACAAACTAAGCTTTCGCTTCGAAACGAATCCGCATTGCCTTACAATGTATGGATTAATGGTTCCG TAATCAAATATAATGTCGTCACTTTTTGCCCTTCCCTTCGCACCCCGACCCAACCAACATAGCTTCTTACACAGCTCTATGCGCCTGTGTTTGCG CG TTCTTGCAAGCTCGATACAATGCAAGGACAGGAGGAATGGTTACTGGTAGAAAACGAGTGACCAGTCCGTATCCATGGTAATCCAGCGTGGTTGCGTGGTATTGCAGTACCAGCAGATGAGAAGATGAAACACAGCATAGGGAAGGTTGTTTGCTACGCGGGGTGGATTTTCGAGCTAGCAGCCCGGAAGCGTTCGAAAGTAGAGGGCCCCAGGCAAGGCGCTCGAGAGAGAAAACAAAAATTATGGTTGGTTTAAAAATAAAACATGTCAAATACTTCCAATCTTACTACAACCAGTAAAATAGCAAATTGGTCACGCATCGGGGGCCGCCCTCCGTTCAGTCCATTCCCCCCC TTCAGAGGCTCAGTGTGGCCGGGGTGGCGGCATCAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CNS08ZW9             [                                  TTATTTAACTATATAGATGTGTTCTGCACAATCTCTCCATTTCTCGCTTCTGGCTACTGCCGCTGTCTTTCATCCTTTTCGACTTTCGTGATCCAAAGTGTGGCTTCCGCCCGAAACTTCTTCAGTCAAGTTATGCTACCTTACAAACTAAGCTTTCGCTTCGAAACGAATCCGCATTGCCTTACAATGTATGGATTAATGGTTCCG TAATCAAATATAATGTCGTCACTTTTTGCCCTTCCCTTCGCACCTCGACCCAACCAACATAGCTTCTTACACAGCTCTATGCGCCTGTGTTTGCG CG TTCTTGCAAGCTCGATACAATGCAAGGACAGGAGGAATGGTTACTGGTAGAAAACGAGTGACCAGTCCGTATCCATGGTAATCCAGCGTGGTTGCGTGGTATTGCAGTACCAGCAGATGAGAAGATGAAACACAGCATAGGGAAGGTTGTTTGCTACGCGGGGTGGATTTTCGAGCTAGCAGCCCGGAAGCGTTCGAAAGTAGAGGGCCCCAGGCAAGGCGCTCGAGAGAGAAAACAAAAATTATGGTTGGTTTAAAAATAAAACATGTCAAATACTTCCAATCTTACTACAACCAGTAAAATAGCAAATTGGTCACGCATCGGGGGCCGCTCTCCGTTCAGTCCATTCCCCCCC TTCAGAGGCTCAGTGTGGCCGGGGTGGCGGCACCAGCTCGGCATCCGATCGAAACCCGTCCTTCGCGATCAGGGTCAGCAGCCGATCCTCGGTAACCGGATTGCGGATGCTTTCCCACACGTTCTTGGCCGTTTCGTAGCTGTTGGGGAACGACTTGTCCGTGCGCTCGCGCATCAGCACCCAGCCATTTTCGAACTTGCACTCGATGATCTTGTTG TT CAGCTTGCGCAGTCCCTTCGTCAGCTTGATCTCGCCGTAGCTGTGCTCCATGCCGCCGAC GTACAGCAGCCCCTTCTTGGTCGGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL BX609164             [                                                                                                                                                                                                                                                                                                                                                                                      GGAATGGTTACTGGTAGAAAACGAGTGACCAGTCCGTATCCATGGTAATCCAGCGTGGTTGCGTGGTATTGCAGTACCAGCAGATGAGAAGATGAAACACAGCATAGGGAAGGTTGTTTGCTACGCGGGGTGGATTTTCGAGCTAGCAGCCCGGAAGCGTTCGAAAGTAGAGGGCCCCAGGCAAGGCGCTCGAGAGAGAAAACAAAAATTATGGTTGGTTTAAAAATAAAACATGTCAAATACTTCCAATCTTACTACAACCAGTAAAATAGCAAATTGGTCACGCATCGGGGGCCGCTCTCCGTTCAGTCCATTCCCCCCC TTCAGAGGCTCAGTGTGGCCGGGGTGGCGGCATCAGCTCGGCATCCGATCGAAACCCGTCCTTCGCGATCAGGGTCAGCAGCCGATCCTCGGTAACCGGATTGCGGATGCTTTCCCACACGTTCTTGGCCGTTTCGTAGCTGTTGGGGAACGACTTGTCCGTGCGCTCGCGCATCAGCACCCAGCCATTTTCGAACTTGCACTCGATGATCTTGTTG TT CAGCTTGCGCAGCTCCTTCGTCAGCTTGATCTCGCCGTAGCTGTGCTCCATGCCGCCGAC GTACAGCAGCCCCTTCTTGGTCGGCAGCATGCCCTGCCCGGTTTCCTCCTTTATCACCAGCCGAAAGTCGATCGAGTTCA TG TGA TGCGGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CNS08VDB             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GCAGATGAGAAGATGAAACACAGCATAGGGAAGGTTGTTTTCTACGCGGGGTGGATTTTCGAGCTAGCAGCCCGGAAGCGTTCGAAAGTAGAGGGCCCCAGGCAAGGCGCTCGAGAGAGAAAACAAAAATTATGGTTGGTTTAAAAATAAAACATGTCAAATACTTCCAATCTTACTACAACCAGTAAAATAGCAAATTGGTCACGCATCGGGGGCCGCTCTCCGTTCAGTCCATTCCCCCCC TTCAGAGGCTCAGTGTGGCCGGGGTGGCGGCATCAGCTCGGCATCCGATCGAAACCCGTCCTTCGCGATCAGGGTCAGCAGCCGATCCTCGGTAACCGGATTGCGGATGCTTTCCCACACGTTCTTGGCCGTTTCGTAGCTGTTGGGGAACGACTTGTCCGTGCGCTCGCGCATCAGCACCCAGCCATTTTCGAACTTGCACTCGATGATCTTGTTG TT CAGCTTGCGCAGCTCCTTCGTCAGCTTGATCTCGCCGTAGCTGTGCTCCATGCCGCCGAC GTACAGCAGCCCCTTCTTGGTCGGCAGCATGCCCTGCCCGGTTTCCTCCTTTATCACCAGCCGAAAGTCGATCGAGTTCA TG TGA TGCGGTTTCCACTTAAGTACAC GC GGCAGACGCCCGACTCGTACGGATCGATCGAGGGCTGAAAGATCAGCCCGTCCGGCT CGTGCCCCAGCCCTTTGGTGAACTTTGGCCCGAGCAGTGCCCGCGACTGCATAATGTCCCAGAACTGTTTCAACCGCACGCCGAACGGTTCGCTCTCCCGGTCCAGCCTGCCCTGCCGTATCGCGTTGGTGCGCGGCTGTATGATTTCGCGATCGATCAGGCCCAACCGGTCGGGGAAGAACCGCTG TTGCGCACCTCCCGATTGTGCAGGTAGATCACATCGTACACGAGATAGCGGGGGATTTTCTTCCCCTCGCCGTAATTGTCCA                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CNS08CNS             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TCCATTCCCCCCCTTTCAGAGGCTCAGTGTGGCCGGGGTGGCGGCATCAGCTCGGCATCCGATCGAAACCCGTCCTTCGCGATCAGGGTCAGCAGCCGATCCTCGGTAACCGGATTGCGGATGCTTTCCCACACGTTCTTGGCCGTTTCGTAGCTGTTGGGGAACGACTTGTCCGTGCG TCGCGCATCAGCACCCAGCCATTTTCGAACTTGCACTCGATGATCTTGTTGTTT CAG TTGCGCAGCTCCTTCGTCAGCTTGATCTCGCCGTAGCTGTGCTCCATGCCGCCGAC GTACAGCAGCCCCTTCTTGGTCGGCAGCATGCCCTGCCCGGTTTCCTCCTTTATCACCAGCCGAAAGTCGATCGAGTTCA TG TGA TGCGGTTTCCACTTAAGTACAC GC GGCAGACGCCCGACTCGTACGGATCGATCGAGGGCTGAAAGATCAGCCCGTCCGGCT CGTGCCCCAGCCCTTTGGTGAACTTTGGCCCGAGCAGTGCCCGCGACTGCATAATGTCCCAGAACTGTTTCAACCGCACGCCGAACGGTTCGCTCTCCCGGTCCAGCCTGCCCTGCCGTATCGCGTTGGTGCGCGGCTGTATGATTTCGCGATCGATCAGGCCCAACCGGTCGGGGAAGAACCGCTG TTGCGCACCTCCCGATTGTGCAGGTAGATCACATCGTACACGAGATAGCGGGGGATTTT TTCCCCTCGCCGTAATT TCC                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CNS090AK             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GTGCG TCGCGCATCAGCACCCAGCCATTTTCGAACTTGCACTCGATGATCTTGTTG TTCCAG TTGCGCAGCTCCTTCGTCAGCTTGATCTCGCCGTAGCTGTGCTCCATGCCGCCGACAGTACAGCAGCCCCTTCTTGGTCGGCAGCATGCCCTGCCCGGTTTCCTCCTTTATCACCAGCCGAAAGTCGATCGAGTTCA TG TGA TGCGGTTTCCACTTAAGTACAC GCGGGCAGACGCCCGACTCGTACGGATCGATCGAGGGCTGAAAGATCAGCCCGTCCGGCTACGTGCCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CNS08XFC             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CTGCCCGGTTTCCTCCTTTATCACCAGCCGAAAGTCGATCGAGTTCATTGTTGATTGCGGTTTCCACTTAAGTACAC GC GGCAGACGCCCGACTCGTACGGATCGATCGAGGGCTGAAAGATCAGCCCGTCCGGCT CGTGCCCCAGCCCTTTGGTGAACTTTGGCCCGAGCAGTGCCCGCGACTGCATAATGTCCCAGAACTGTTTCAAGCGCgcag                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL BX627424             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CACCAGCCGAAAGTCGATCGAGTTCA TG TGA TGCGGTTTCCACTTAAGTACCCGGG GGCAGACGCCCGACTCGTACGGATCGATCGAGGGCTGAAAGATCAGCCCGTCCGGCT CGTGGCCCAGCCNTTTGGTGAACTTTGGCCCGAGCAGTGCCCGCGACTGCATAATGTCCCAGAACTGTTTCAACCGCACGCCGAACGGTTCGCTCTCCCGGTCCAGCCTGCCCTGCCGTATCGCGTTGGTGCGCGGCTGTATGATTTCGCGATCGATCAGGCCCAACCGGTCGGGGAAGAATCGCTGCTTGCGCACCTCCCGATTGTGCAGGTAGATCACATCGTACACGAGATAGCGGGGGATTTTCTTCCCCTCGCCGTAATTGTCCAGCACCATCTCCCCGTCGACAAGCGTGTCGGTGATGTGGACGGACGTGTCCTTCAGGGTGGGGAACCGGATACCCTCCGCCTTGAACACCGAGTTGTCTCGGTCGAGGAAGTAAATCTCGCCCTCGCGATGGATCAGCATCATGTAGCGGGTGCCATCCGCCTTCCAGGACACCCGGTACGGCATCTCCTTGAGGTAGCGTATGTTATGCATGTCCATCGAGACGGGCTGCGCGCCGGCAAAGCCCTGCAGCTTGCTGCCGCACATCTCGCGCACTCGCTCCTGCAGCTTGGCAATCAGGGCTTCGTCCCGCACCAACGTCACGCCCGGCACGTCCTCCATGAAGACTGCGTTCGGGTTGTACGAGGCTCGCTTGAAGC]
[-] EMBL CNS08I4I             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CAGCCTGCCCTGCCGTATCGCGTTGGTGCGCGGCTGTATGATTTCGCGATCGATCAGGCCCAACCGGTCGGGGAAGAACCGCTC TTGCGCACCTCCCGATTGTGCAGGTAGATCACATCGTACACGAGATAGCGGGGGATTTTCTTCCCCTCGCCGTAATTGTCCAG                                                                                                                                                                                                                                                                                                                                                                                         ]




>consensus_9478#0
TTTTTTTTGGTTTTAAACGCTGTCTTGCGGAAATTTATTTAACTATATAGATGTGTTCTG
CACAATCTCTCCATTTCTCGCTTCTGGCTACTGCCGCTGTCTTTCATCCTTTTCGACTTT
CGTGATCCAAAGTGTGGCTTCCGCCCGAAACTTCTTCAGTCAAGTTATGCTACCTTACAA
ACTAAGCTTTCGCTTCGAAACGAATCCGCATTGCCTTACAATGTATGGATTAATGGTTCC
GTAATCAAATATAATGTCGTCACTTTTTGCCCTTCCCTTCGCACCTCGACCCAACCAACA
TAGCTTCTTACACAGCTCTATGCGCCTGTGTTTGCGCGTTCTTGCAAGCTCGATACAATG
CAAGGACAGGAGGAATGGTTACTGGTAGAAAACGAGTGACCAGTCCGTATCCATGGTAAT
CCAGCGTGGTTGCGTGGTATTGCAGTACCAGCAGATGAGAAGATGAAACACAGCATAGGG
AAGGTTGTTTGCTACGCGGGGTGGATTTTCGAGCTAGCAGCCCGGAAGCGTTCGAAAGTA
GAGGGCCCCAGGCAAGGCGCTCGAGAGAGAAAACAAAAATTATGGTTGGTTTAAAAATAA
AACATGTCAAATACTTCCAATCTTACTACAACCAGTAAAATAGCAAATTGGTCACGCATC
GGGGGCCGCTCTCCGTTCAGTCCATTCCCCCCCTTCAGAGGCTCAGTGTGGCCGGGGTGG
CGGCATCAGCTCGGCATCCGATCGAAACCCGTCCTTCGCGATCAGGGTCAGCAGCCGATC
CTCGGTAACCGGATTGCGGATGCTTTCCCACACGTTCTTGGCCGTTTCGTAGCTGTTGGG
GAACGACTTGTCCGTGCGCTCGCGCATCAGCACCCAGCCATTTTCGAACTTGCACTCGAT
GATCTTGTTGTTCAGCTTGCGCAGCTCCTTCGTCAGCTTGATCTCGCCGTAGCTGTGCTC
CATGCCGCCGACGTACAGCAGCCCCTTCTTGGTCGGCAGCATGCCCTGCCCGGTTTCCTC
CTTTATCACCAGCCGAAAGTCGATCGAGTTCATGTGATGCGGTTTCCACTTAAGTACACG
CGGCAGACGCCCGACTCGTACGGATCGATCGAGGGCTGAAAGATCAGCCCGTCCGGCTCG
TGCCCCAGCCCTTTGGTGAACTTTGGCCCGAGCAGTGCCCGCGACTGCATAATGTCCCAG
AACTGTTTCAACCGCACGCCGAACGGTTCGCTCTCCCGGTCCAGCCTGCCCTGCCGTATC
GCGTTGGTGCGCGGCTGTATGATTTCGCGATCGATCAGGCCCAACCGGTCGGGGAAGAAC
CGCTGTTGCGCACCTCCCGATTGTGCAGGTAGATCACATCGTACACGAGATAGCGGGGGA
TTTTCTTCCCCTCGCCGTAATTGTCCAGCACCATCTCCCCGTCGACAAGCGTGTCGGTGA
TGTGGACGGACGTGTCCTTCAGGGTGGGGAACCGGATACCCTCCGCCTTGAACACCGAGT
TGTCTCGGTCGAGGAAGTAAATCTCGCCCTCGCGATGGATCAGCATCATGTAGCGGGTGC
CATCCGCCTTCCAGGACACCCGGTACGGCATCTCCTTGAGGTAGCGTATGTTATGCATGT
CCATCGAGACGGGCTGCGCGCCGGCAAAGCCCTGCAGCTTGCTGCCGCACATCTCGCGCA
CTCGCTCCTGCAGCTTGGCAATCAGGGCTTCGTCCCGCACCAACGTCACGCCCGGCACGT
CCTCCATGAAGACTGCGTTCGGGTTGTACGAGGCTCGCTTGAAGC

consensusID : consensus_9478#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 512
fasta sequence

                              [ATGTATGGATTAATGGTTCCGTAATCAAATATAATGTCGTCACTTTTTGCCCTTCCCTTCGCACCTCGGCCCAACTAACGTAGCTTCTTACACAGCTCTAGGCGCCTGTGTTTGCGCGTTCTTGCAAGCTCGATACAATGCAAAGACAGGAGGAATGGTTACTGGTAGAAAACGAGTGACCAGTCCGTATCCATGGTAATCCAGCGTGGTTGCGTGGTATTGCAGTACCAGCAGATGAGAAGATGAAACGCAGCATAAGGAAGGTTGTTTGCTACGCGGCTAACAGCCCGAAAGCGTTCGAAAGTACAGGGCCCCAGGCAAGGCGCTCGAGAGAGAAAACAAAAATTGTGGTTGGTTTAAAAATAAAACATGTCAAATACTTCCAATCTTACTACAACCAGTAAAATAGCAAATTGGTCACGCATCGGGGGCCGCTCTCCGTTCAGTCCAATCCCCCCCTCCCGCCCCCCCTCAGAGGCTCAGTGTGGCCGGGGTGGCGGCATCAGCTCCGG]

[-] EMBL BM644114             [ATGTATGGATTAATGGTTCCGTAATCAAATATAATGTCGTCACTTTTTGCCCTTCCCTTCGCACCTCGGCCCAACTAACGTAGCTTCTTACACAGCTCTAGGCGCCTGTGTTTGCGCGTTCTTGCAAGCTCGATACAATGCAAAGACAGGAGGAATGGTTACTGGTAGAAAACGAGTGACCAGTCCGTATCCATGGTAATCCAGCGTGGTTGCGTGGTATTGCAGTACCAGCAGATGAGAAGATGAAACGCAGCATAAGGAAGGTTGTTTGCTACGCGGCTAACAGCCCGAAAGCGTTCGAAAGTACAGGGCCCCAGGCAAGGCGCTCGAGAGAGAAAACAAAAATTGTGGTTGGTTTAAAAATAAAACATGTCAAATACTTCCAATCTTACTACAACCAGTAAAATAGCAAATTGGTCACGCATCGGGGGCCGCTCTCCGTTCAGTCCAATCCCCCCCTCCCGCCCCCCCTCAGAGGCTCAGTGTGGCCGGGGTGGCGGCATCAGCTCCGG]




>consensus_9478#1
ATGTATGGATTAATGGTTCCGTAATCAAATATAATGTCGTCACTTTTTGCCCTTCCCTTC
GCACCTCGGCCCAACTAACGTAGCTTCTTACACAGCTCTAGGCGCCTGTGTTTGCGCGTT
CTTGCAAGCTCGATACAATGCAAAGACAGGAGGAATGGTTACTGGTAGAAAACGAGTGAC
CAGTCCGTATCCATGGTAATCCAGCGTGGTTGCGTGGTATTGCAGTACCAGCAGATGAGA
AGATGAAACGCAGCATAAGGAAGGTTGTTTGCTACGCGGCTAACAGCCCGAAAGCGTTCG
AAAGTACAGGGCCCCAGGCAAGGCGCTCGAGAGAGAAAACAAAAATTGTGGTTGGTTTAA
AAATAAAACATGTCAAATACTTCCAATCTTACTACAACCAGTAAAATAGCAAATTGGTCA
CGCATCGGGGGCCGCTCTCCGTTCAGTCCAATCCCCCCCTCCCGCCCCCCCTCAGAGGCT
CAGTGTGGCCGGGGTGGCGGCATCAGCTCCGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9478#0      TTTTTTTTGGTTTTAAACGCTGTCTTGCGGAAATTTATTTAACTATATAGATGTGTTCTG 60
consensus_9478#1      ------------------------------------------------------------
                                                                                  

consensus_9478#0      CACAATCTCTCCATTTCTCGCTTCTGGCTACTGCCGCTGTCTTTCATCCTTTTCGACTTT 120
consensus_9478#1      ------------------------------------------------------------
                                                                                  

consensus_9478#0      CGTGATCCAAAGTGTGGCTTCCGCCCGAAACTTCTTCAGTCAAGTTATGCTACCTTACAA 180
consensus_9478#1      ------------------------------------------------------------
                                                                                  

consensus_9478#0      ACTAAGCTTTCGCTTCGAAACGAATCCGCATTGCCTTACAATGTATGGATTAATGGTTCC 240
consensus_9478#1      ----------------------------------------ATGTATGGATTAATGGTTCC 20
                                                              ********************

consensus_9478#0      GTAATCAAATATAATGTCGTCACTTTTTGCCCTTCCCTTCGCACCTCGACCCAACCAACA 300
consensus_9478#1      GTAATCAAATATAATGTCGTCACTTTTTGCCCTTCCCTTCGCACCTCGGCCCAACTAACG 80
                      ************************************************ ****** *** 

consensus_9478#0      TAGCTTCTTACACAGCTCTATGCGCCTGTGTTTGCGCGTTCTTGCAAGCTCGATACAATG 360
consensus_9478#1      TAGCTTCTTACACAGCTCTAGGCGCCTGTGTTTGCGCGTTCTTGCAAGCTCGATACAATG 140
                      ******************** ***************************************

consensus_9478#0      CAAGGACAGGAGGAATGGTTACTGGTAGAAAACGAGTGACCAGTCCGTATCCATGGTAAT 420
consensus_9478#1      CAAAGACAGGAGGAATGGTTACTGGTAGAAAACGAGTGACCAGTCCGTATCCATGGTAAT 200
                      *** ********************************************************

consensus_9478#0      CCAGCGTGGTTGCGTGGTATTGCAGTACCAGCAGATGAGAAGATGAAACACAGCATAGGG 480
consensus_9478#1      CCAGCGTGGTTGCGTGGTATTGCAGTACCAGCAGATGAGAAGATGAAACGCAGCATAAGG 260
                      ************************************************* ******* **

consensus_9478#0      AAGGTTGTTTGCTACGCGGGGTGGATTTTCGAGCTAGCAGCCCGGAAGCGTTCGAAAGTA 540
consensus_9478#1      AAGGTTGTTTGCTACGCGG--------------CTAACAGCCCGAAAGCGTTCGAAAGTA 306
                      *******************              *** ******* ***************

consensus_9478#0      GAGGGCCCCAGGCAAGGCGCTCGAGAGAGAAAACAAAAATTATGGTTGGTTTAAAAATAA 600
consensus_9478#1      CAGGGCCCCAGGCAAGGCGCTCGAGAGAGAAAACAAAAATTGTGGTTGGTTTAAAAATAA 366
                       **************************************** ******************

consensus_9478#0      AACATGTCAAATACTTCCAATCTTACTACAACCAGTAAAATAGCAAATTGGTCACGCATC 660
consensus_9478#1      AACATGTCAAATACTTCCAATCTTACTACAACCAGTAAAATAGCAAATTGGTCACGCATC 426
                      ************************************************************

consensus_9478#0      GGGGGCCGCTCTCCGTTCAGTCCATTCCCCCCCT-----------TCAGAGGCTCAGTGT 709
consensus_9478#1      GGGGGCCGCTCTCCGTTCAGTCCAATCCCCCCCTCCCGCCCCCCCTCAGAGGCTCAGTGT 486
                      ************************ *********           ***************

consensus_9478#0      GGCCGGGGTGGCGGCATCAGCTCGGCATCCGATCGAAACCCGTCCTTCGCGATCAGGGTC 769
consensus_9478#1      GGCCGGGGTGGCGGCATCAGCTCCGG---------------------------------- 512
                      *********************** *                                   

consensus_9478#0      AGCAGCCGATCCTCGGTAACCGGATTGCGGATGCTTTCCCACACGTTCTTGGCCGTTTCG 829
consensus_9478#1      ------------------------------------------------------------
                                                                                  

consensus_9478#0      TAGCTGTTGGGGAACGACTTGTCCGTGCGCTCGCGCATCAGCACCCAGCCATTTTCGAAC 889
consensus_9478#1      ------------------------------------------------------------
                                                                                  

consensus_9478#0      TTGCACTCGATGATCTTGTTGTTCAGCTTGCGCAGCTCCTTCGTCAGCTTGATCTCGCCG 949
consensus_9478#1      ------------------------------------------------------------
                                                                                  

consensus_9478#0      TAGCTGTGCTCCATGCCGCCGACGTACAGCAGCCCCTTCTTGGTCGGCAGCATGCCCTGC 1009
consensus_9478#1      ------------------------------------------------------------
                                                                                  

consensus_9478#0      CCGGTTTCCTCCTTTATCACCAGCCGAAAGTCGATCGAGTTCATGTGATGCGGTTTCCAC 1069
consensus_9478#1      ------------------------------------------------------------
                                                                                  

consensus_9478#0      TTAAGTACACGCGGCAGACGCCCGACTCGTACGGATCGATCGAGGGCTGAAAGATCAGCC 1129
consensus_9478#1      ------------------------------------------------------------
                                                                                  

consensus_9478#0      CGTCCGGCTCGTGCCCCAGCCCTTTGGTGAACTTTGGCCCGAGCAGTGCCCGCGACTGCA 1189
consensus_9478#1      ------------------------------------------------------------
                                                                                  

consensus_9478#0      TAATGTCCCAGAACTGTTTCAACCGCACGCCGAACGGTTCGCTCTCCCGGTCCAGCCTGC 1249
consensus_9478#1      ------------------------------------------------------------
                                                                                  

consensus_9478#0      CCTGCCGTATCGCGTTGGTGCGCGGCTGTATGATTTCGCGATCGATCAGGCCCAACCGGT 1309
consensus_9478#1      ------------------------------------------------------------
                                                                                  

consensus_9478#0      CGGGGAAGAACCGCTGTTGCGCACCTCCCGATTGTGCAGGTAGATCACATCGTACACGAG 1369
consensus_9478#1      ------------------------------------------------------------
                                                                                  

consensus_9478#0      ATAGCGGGGGATTTTCTTCCCCTCGCCGTAATTGTCCAGCACCATCTCCCCGTCGACAAG 1429
consensus_9478#1      ------------------------------------------------------------
                                                                                  

consensus_9478#0      CGTGTCGGTGATGTGGACGGACGTGTCCTTCAGGGTGGGGAACCGGATACCCTCCGCCTT 1489
consensus_9478#1      ------------------------------------------------------------
                                                                                  

consensus_9478#0      GAACACCGAGTTGTCTCGGTCGAGGAAGTAAATCTCGCCCTCGCGATGGATCAGCATCAT 1549
consensus_9478#1      ------------------------------------------------------------
                                                                                  

consensus_9478#0      GTAGCGGGTGCCATCCGCCTTCCAGGACACCCGGTACGGCATCTCCTTGAGGTAGCGTAT 1609
consensus_9478#1      ------------------------------------------------------------
                                                                                  

consensus_9478#0      GTTATGCATGTCCATCGAGACGGGCTGCGCGCCGGCAAAGCCCTGCAGCTTGCTGCCGCA 1669
consensus_9478#1      ------------------------------------------------------------
                                                                                  

consensus_9478#0      CATCTCGCGCACTCGCTCCTGCAGCTTGGCAATCAGGGCTTCGTCCCGCACCAACGTCAC 1729
consensus_9478#1      ------------------------------------------------------------
                                                                                  

consensus_9478#0      GCCCGGCACGTCCTCCATGAAGACTGCGTTCGGGTTGTACGAGGCTCGCTTGAAGC 1785
consensus_9478#1      --------------------------------------------------------