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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9485#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 2000 fasta sequence
[CCGCGGACGCGTGGGCGGACGCGTGGGTGTGTTTTGACTCGGCAACTACGAAAGCACCAGCCGAGGGAGC--AGAGAGAAAAAAAAATACACACTCACTGCATTGAACAAATTAAAATATCTGCACCATGTCGCAACAGCAACCGCCGAAAAAGAAAGCTACCAAGGGCAACAAACAGATCGTGGAGGAAAATGTGGCCACGGTTAAGTTTTACCGCAACATGTCGCTCATTGCCACCGCGGTCCAGTTTCTTGGGTTTGCCGTGTATGCGGAGCTGTCCACACTGGCAGTGGTCATGACTGTCCTGTGCGTCGTAGCGCATGTGGCCAGCTATTACTTTATGGCGTTGATCAGCAAACCAAAACTTACCGAAAAGGGAGACATCATCGAGACGGGTACGGACCTCAACATTGAAGGAGGCATCACGGAACACGTGAAAGACATCGTGATCCTGACGGCCGGTACGCAGCTTGTATCCATGCTGTCGGAATTCTTCTGGCTGCTGATGTTGCTGCTCCCGATTCGGGCCGGCTGGCTGTTGTGGCAAACGGTGGGAAAACAGTTCTTCCAGGGCGATCCGGCAGAGGAGGCTCCTGTCAATGAGAAGAAGCAAAAGAAGCTAATGCGAAAGATGAACCGAGCGCGGCAGTGACATTAATCGTGACATGATGGTAGGAGGCTGTTGCAGCGGTCTCTAACAGCCACATCGCAGCAGTGTCCATTCATTGTAAGGAAATCAACACCATCTTCAACCAGCAAACCATTCACCGAAAGAAGGCTCACGTGGTGCTGGTCCACAACACTGTAGCAGTGTGTGTGTGTGTATTCATCGTCTTACTGTTAAGCGCGACCTCTTGTTTTATGTTGAGTGTG--TTTTTTTTGTTTTATTTAGACTGAATATAAATAATTTTCATGCTTTGCTCTGAGCGGCTGCGTAAACGGTGAAAACCATGCTAGCGAAAAGTGACCAAACACTGCCTGGAAGCTTTTCCAGCGCGATTTCTTCACCCAGCGGGCTTCCTCCTTTTTCAGCTGCTCTATGCCCGTTTCATCCGTCCATATTGCGTTCAGCTGGGTGCCGAGCATGATCATCGTGAAGACGGCAAACAGTAGCGCTTCCAGTATGAGGAAGAGCAGCAGTATCACGGTGGCCGGTGGCGAATAGTTGGAACACTCTCTCCACTCGTTTTTGATGCACAGGCAGAACTGATTTACGGCCAGAAATATCGAATGGATGGAAATGAATGCGATGTAAAACGT-AAAAAGTACGAAAAACTTCTGATTGTTCTCCCCGACGCAGTTGTTTATCCACGGACAGTGGTGGTCCATCTTGCGTATGCACCGCTGGCAGACGGAACAGTGGTGGGCACGCTCCGGTTTAATACTGCAGCATTTGGGACATTTGAAAAACACCTGCCCCTCCTGGTAGCCGAGCTGCTGGATCATTTCCTTCGTGGCGTTTCCTTTCGGTACGGCACCCGGATCGGACAGCATGGTACGCAGGTGTGATGCAAACGCCAGGAACGAGCCCGTGTTAAAGATAATAAAGTTAATGTACCGATAGGCCTTGTAAGGATGGGGCAGCAGGATCACCATTGTGACGACGAATTCCGCATACAATATTAAACCCCACGTTAAAACGGCACAGATAATGCCGCAAATGTCCTGTACACACCAAACGCGTCCACCGCAGCAGCGGTTTTGCGTTTCCTTCTCGTTCCTCATCAGCATGTACTCGTACTCCATCGTTCGCGGAGACGGGAGAGGCGGGAGACGGTAGCAGCACCAAGATCCGGCCACCTATCCTCCAGACGAACTGTGGTGCAGCAGCAGCACCCACCGGAAGGGAATTGCAGCCAACCACCACCA-C-CACCACCACCACCCACCAGTGAAACGATTCTTGAACACACCGTAAATCAATCGATAGTACGCGGGCTGGGACGGAGAACGCAAAAATCGTTTCACATTCTGTAGGGTTTCGTGTTTTTCTTTGCTCCGGCGG]
[+] EMBL BM604834 [CCGCGGACGCGTGGGCGGACGCGTGGGTGTGTTTTGACTCGGCAACTACGAAAGCACCAGTCGAGGGAGC ATAGAGAGAAAAAAATACGGGCTTACTGCATTGAACAAATTAAAATATCTGCACCATGTCGCAACAGCAGCCGCCGAAAAAGAAAGCTACCAAGGGCAACAAACAGATCGTGGAGGAAAATGTGGCCACGGTTAAGTTTTACCGCAACATGTCGCTCATTGCCACCGCGGTACAGTTTCTTGGGTTTGCCGTGTATGCGGAGCTGTCCACACTGGCAGTGGTCATGACTGTCCTGTGCGTCGTAGCGCATGTGGCCAGCTATTACTTTATGGCGTTGATCAGCAAACCAAAACTTACCGAAAAGGGAGACATCATCGAGACGGGTACGGACCTCAACATTGAGGGAGGCATCACGGAACACGTGAAAGACATCGTGATCCTGACTGCCGGTACGCAGCTTGTATCCATGCTGTCGGAATTCTTCTGGC ]
[+] EMBL CNS09J3U [ CTACGAAAGCACCAGCCGAGGGAGCATAGAGAGAAAAAAAAATACACACTCACTGCATTGAACAAATTAAAATATCTGCACCATGTCGCAACAGCAACCGCCGAAAAAGAAAGCTACCAAGGGCAACAAACAGATCGTGGAGGAAAATGTGGCCACGGTCAAGTTTTACCGCAACATGTCGCTCATTGCCACCGCGGTGCAGTTTCTTGGGTTTGCCGTGTATGCGGA CTGTCCACACTGGCAGTGGTCATGACGGTCCTGTGCGTCGTAGCGCATGTGGCCAGCTATTACTTTATGGCGTTGATCAGCAAACCAAAACTTACCGAAAAGGGAGACATCATCGAGACGGGTACGGACCTCAACATTGAAGGAGGCATCACGGAACACGTGAAAGACATCGTGATCCTGACGGCCGGTACGCAGCTTGTATCCATGCTGTCGGAATTCTTCTGGCTGCTGATGCTGCTGCTCCCGATTCGGGCCGGCTGGCTGTTGTGGCAAACGGTGGGAAAACAGTTCTTCCAGGGCGATCCGGCAGAGGAGGCTCCTGTCAATGAGAAGAAGCAAAAGAAGCTAATGCGAAAGATGAACCGAGCGCGGCAGTGACATTAATCGTGACATGATGGTAGGAGGCTGTTGCAGCGGTCTCTAACAGCCACATCGCAGCAGTGTCCATTCATTGTAAGGAAATCAACACCATCTTCAACCAGCAAACCATTCACCGGAAGAAGGCTCAAGTGGTGCTGGTCCACAACACTGGAGCA GTGTGTGTGTATTCATCGTCTTAC ]
[+] EMBL CNS099M6 [ GAAAGCACAAGCCGAGGGAGC AGAGAGAAAAAAAAATACACACTCACTGCATTGAACAAACTAGAATATCTGCACCATGTCGCAACAGCAACCACCGAAAAAGAAAGCTACCAAGGGCAACAAACAGATCGTGGAGGAAAATGTGGCCACGGTTAAGTTTTACCGCAACATGTCGCTCATTGCCACCGCGGTCCAGTTTCTTGGGTTTGCCGTGTATGCGGA CTGTCCACACTGGCAGTGGTCATGACTGTCCTGTGCGTCGTAGCGCATGTGGCCAGCTATTACTTTATGGCGTTGATCAGCAAACCAAAACTTACCGAAAAGGGAGACATCATCGAGACGGGTACGGACCTCAACATTGAAGGAGGCATCACGGAACACGTGAAAGACATCGTGATCCTGACGGCCGGTACGCAGCTTGTATCCATGCTGTCGGAATTCTTCTGGCTGCTGATGTTGCTGCTCCCGATTCGGGCCGGCTGGCTGTTGTGGCAAACGGTGGGAAAACAGTTCTTCCAGGGCGATCCGGCAGAGGAGGCTCCTGTCAATGAGAAGAAGCAAAAGAAGCTAATGCGAAAGATGAACCGAGCGCGGCAGTGACATTAATCGTGACATGATGGTAGGAGGCTGTTGCAGCGGTCTCTAACAGCCACATCGCAGCAGTGTCCATTCATTGTAAGGAAATCAACAGCATCTTCAACCAGCAAACCATTCACCGAAAGAAGGCTCACGTGGTGCTGGTCCACAACACTGTAGCAGTGTGTGTGTGTGTATTCATCGTCTTACTGTTAAGCGCGACCTCTTGTTTTATGTTGAGTGTG TTTTTTTTGTTTTATTTAGACTGAATATAAATAATTTTCATGCTTTGCTCTGAGCGGCTGCGTA ]
[+] EMBL CNS08Y42 [ ACAAGCCGAGGGAGC AGAGAGAAAAAAAAATACACACTCACTGCATTGAACAAACTAGAATATCTGCACCATGTCGCAACAGCAACCACCGAAAAAGAAAGCTACCAAGGGCAACAAACAGATCGTGGAGGAAAATGTGGCCACGGTTAAGTTTTACCGCAACATGTCGCTCATTGCCACCGCGGTCCAGTTTCTTGGGTTTGCCGTGTATGCGGA CTGTCCACACTGGCAGTGGTCATGACTGTCCTGTGCGTCGTAGCGCATGTGGCCAGCTATTACTTTATGGCGTTGATCAGCAAACCAAAACTTACCGAAAAGGGAGACATCATCGAGACGGGTACGGACCTCAACATTGAAGGAGGCATCACGGAACACGTGAAAGACATCGTGATCCTGACGGCCGGTACGCAGCTTGTATCCATGCTGTCGGAATTCTTCTGGCTGCTGATGTTGCTGCTCCCGATTCGGGCCGGCTGGCTGTTGTGGCAAACGGTGGGAAAACAGTTCTTCCAGGGCGATCCGGCAGAGGAGGCTCCTGTCAATGAGAAGAAGCAAAAGAAGCTAATGCGAAAGATGAACCGAGCGCGGCAGTGACATTAATCGTGACATGATGGTAGGAGGCTGTTGCAGCGGTCTCTAACAGCCACATCGCAGCAGTGTCCATTCATTGTAAGGAAATCAACAGCATCTTCAACCAGCAAACCATTCACCGAAAGAAGGCTCACGTGGTGCTGGTCCACAACACTGTAGCAGTGTGTGTGTGTGTATTCATCGTCTTACTGTTAAGCGCGACCTCTTGTTTTATGTTGAGTGTG TTTTTTTTGTTTTATTTAGACTGAATATAAATAATTTTCATGCTTTGCTCTGAGCGGCTGCGTAAACGGTG AAACCATGCTAGCGAAAAGTGACCAAACACTGCCTGGAAGCTTTTCCAGCGCGATTTC ]
[+] EMBL BM590083 [ ccgATTAAAATATCTGCAGCATGTCGCAACAGCAACCGCCGAAAAAGAAAGCTACCAAGGGCAACAAACAGATCGTGGAGGAAAATGTGGCCACGGTTAAGTTTTACCGCAACATGTCGCTCATTGCCACCGCGGTGCAGTTTCTTGGGTTTGCCGTGTATGCGGAGCTGTCCACACTGGCAGTGGTCATGACTGTCCTGTGCGTCGTAGCGCATGTGGCCAGCTATTACTTTATGGCGTTGATCAGCAAACCAAAACTTACCGAAAAGGGAGACATCATCGAGACGGGTACGGACCTCAACATTGAAGGAGGCATCACGGAACACGTGAAAGACATCGTGATCCTGACGGCCGGTACGCAGCTTGTATCCATGCTGTCGGAATTCTTCTGGCTGCTGATGCTGCTGCTCCCGATTCGGGCCGGCTGGCTGTTGTGGCAAACGGTGGGAAAACAGTTCTTCCAGGGCGATCCGGCAGAGGAGGCTCCTGTCAATGAGAAGAAGCAAAAGAAGCTAATGCGAAAGATGAACCGAGCGCGGCAGTGACATTAATCGTGACATGATGGTAGGAGGCTGTTGGAACGGTCTACAACAGCCACATCGCAGCAGTGTCCATTCATTGTAAGGAAATCAACACCATCTTCAACCAGCAAACCATTC ]
[-] EMBL CNS08Y43 [ TCTGCACCTTGTCGCCACAGCAACCACCGAAAAAGAAAGCTACCAAGGGCAACAAACAGATCGTGGAGGAAAATGTGGCCACGGTTAAGTTTTACCGCAACATGTCGCTCATTGCCACCGCGGTCCAGTTTCTTGGGTTTGCCGTGTATGCGGAGCTGTCCAAACTGGCAGTGGTCATAACTGTCCTGTGCGTCGTAGCGCATGTGGCCAGCTATTACTTTATGGCGTTGATCAGCAAACCAAAACTTACCGAAAAGGGAAACATCATCGAGACGGGTACGGACCTCAACATTGAAGGAGGCATCACGGAACACGTGAAAGACATCGTGATCCTGACGGCCGGTACGCAGCTTGTATCCATGCTGTCGGAATTCTTCTGGCTGCTGATGTTGCTGCTCCCGATTCGGGCCCGCTGGCTGTTGTGGCAAACGGTGGGAAAACAGTTCTTCCAGGGCGATCCGGCAGAGGAGGCTCCTGTCAATGAGAAGAAGCAAAAGAAGCTAATGCGAAAGATGAACCGAGCGCGGCAGTGACATTAATCGTGACATGATGATAGGAGGCTGTTGCAGCGGTCTCTTACAGCCACATCGCAGCAGTGTCCATTCATTGTAAGGAAATCAACAGCATCTTCAACCAGCAAACCATTCACCGAAAGAAGGCTCACGTGGTGCTGGTCCACAAAACTGTAGCAGTGTGTGTGTGTGTATTCATCGTCTTACTGTTAAGCGCGACCTCTTGTTTTATGTTGAGTGTG TTTTTTTTGTTTTATTTAGACTGAATATAAATAATTTTCATGCTTTGCTCTGAGCGGCTGCGTAAACGGTGAAAACCATGCTAGCGAAAAGTGACCAAACACTGCCTGGAAGCTTTTCCAGCGCGATTTCTTCACCCAGCGGGCTTCCTCCTTTTTCAGCTGCTCTATGCCCGcgtgaaa ]
[-] EMBL CNS09J3V [ GCTCCTGTCAATGAGAAGAAGCAAAAGAAGCTAATGCGAAAGATGAACCGAGCGCGGGAGTGACATTAATCGTGACATGATGGTAGGAGGCTGTTGCAGCGGTCTCTTACAGCCACATCGCAGCAGTGTCCATTCATTTTAAGGAAATCAACACCATCTTCAACCAGCAAACCATTCCCCGGAAGAAGGCTCACGTGGTGCTGGTCCACAAAACTGGAGCA GTGTGTGTGTATTCATCGTCTTACTGTTAAGCGCGACCTCTTGTTTTATGTTGAGTGTGTTTTTTTTTTGTTTTATTTAGACTGAATATAAATAATTTTCATG TTTGC ]
[-] EMBL CNS099M7 [ ACCTCTTGTTTTATGTTGAGTGTG TTTTTTTTGTTTTATTTAGACTGAATATAAATAATTTTCATGCTTTGCTCTGAGCGGCTGCGTAAACGGTGAAAACCATGCTAGCGAAAAGTGACCAAACACTGCCTGGAAGCTTTTCCAGCGCGATTTCTT ]
[-] EMBL BX609350 [ TG TTTTTTTTGTTTTATTTAGACTGAATATAAATAATTTTCATGCTTTGCTCTGAGCGGCTGCGTAAACGGTGAAAACCATGCTAGCGAAAAGTGACCAAACACTGCCTGGAAGCTTTTCCAGCGCGATTTCTTCACCCAGCGGGCTTACTCCTTTTTCAGCTGCTCTATGCCCGTTTCATCCGTCCATATTGCGTTCAGCTGGGTGCCGAGCATGATCATCGTGAAGACGGCAAACAGTAGCGCTTCCAGTATGAGGAAGAGCAGCAGTATCACGGTGGCCGGTGGCGAATAGTTGGAACACTCTCTCCACTCGTTTTTGATGCACAGGCAGAACTGATTTACGGCCAGAAATATCGAATGGATGGAAATGAATGCGATGTAAAACGT AAAAAGTACGAAAAACTTCTGATTGTTCTCCCCGACGCAGTTGTTTATCCACGGACAGTGGTGGTCCATCTTGCGTATGCACCGCTGGCAGACGGAACAGTGGTGGGCACGCTCCGGTTTAATACTGCAGCATTTGGGACATTTGAAAAACACCTGCCCCTCCTGGTAGCCGAGCTGCTGGATCATTTCCTTCGTGGCGTTTCCTTTCGGTACGGCACCCGGATCGGACAGCATGGTACGCAGGTGTGATGCAAACGCCAGGAACGAGCCCGTGTTAAAGATAATGAAGTTAATGTACCGATAGGCCTTGTAAGGATGGGGCAGCAGGATCACCATTGTGACGACGAATTCCGCATACAATATTAAACCCCACGTTAAAACGG ]
[+] EMBL BM655623 [ AGCGGGCTTCCTCCTTTTTCAGCTGCTCTATGCCCGTTTCATCCGTCCATATTGCGTTCAGCTGTGTGCCGAGCATGATCATCGTGAAGACGGCAAACAGTAGCGCTTCCAGTATGAGGAAGAGCAGCAGTATCACGGTGGCCGGTGGCGAATAGTTGGAACACTCTCTCCACTCGTTTTTGATGCACAGGCAGAACTGATTTACCGCCAGAAATATCGAATGGATGGAAATGAATGCGATGTAAAACGT AAAAAGTACGAAAAACTTCTGATTGTTCTCCCCGACGCAGTTGTTTATCCAC ]
[-] EMBL BM618041 [ ATATGGAATGGATGGAAATGAATGCGATGTAAAACGTAAAAAAGTTCGAAAAACTTCTGATTGTTCTCCCCGACGCAGTTGTTTATCCACGGACAGTGGTGGTTCATCTTGCGTATGCACCGCTGGCAGACGGAACAGTGGTGGGCACGCTCCGGCTTAATACTGCAGCATTTGGGACATTTGAAAAACACCTGCCCCTCCTGGTAGCCGAGCTGCTGGATCATTTCCTTCGTGGCGTTTCCTTTCGGTACGGCACCCGGATCGGACAGCATGGTACGCAGGTGTGATGCAAACGCCAGGAACGAGCCCGTGTTAAAGATAATAAAGTTAATGTACCGATAGGCCTTGTAAGGATGGGGCAGCAGGATCACCATTGTGACGACGAATTCCGCATACAATATTAAACCCCACGTTAAAACGGCACAGATAATGCCGCAAATGTCCTGTACACACCAAACGCGTCCACCGCAGCAGCGGTTTTGCGTTTCCTTCTCGTTCCTCATCAGCATGTACTCGTACTCCATCGTTCGCGGAGACGGGAGAGGCGGGAGACGGTAGCAGCACCAAGATCCGGCCACCTATCCTCCAGACGAACTGTGGTGCAGCAGCAGCACCCACCGGAAGGGAATTGCAGCCAACCACCACCACC CACCACCACCACCCACCAGTGAAACGATTCTTGAACACACCGTAAATCAATCGATAGTACGCGGGCTGGGACGGAGAACGCAAAAATCGTTTCACATTCTGTAGGGTTTCGTGTTTTTCTTTGCTCTGGCGG]
[-] EMBL BM575206 [ GTACGCAGGTGTGATGCAAACGCCAGGAACGAGCCCGTGTTAAAGATAATAAAGTTAATGTACCGATAGGCCTTGTAAGGATGGGGCAGCAGGATCACCATTGTGACGACGAATTCCGCATACAATATTAAACCCCACGTTAAAACGGCACAGATAATGCCGCAAATGTCCTGTACACACCAAACGCGTCCACCGCAGCAGCGGTTTTGCGTTTCCTTCTCGTTCCTCATCAGCATGTACTCGTACTCCATCGTTCGCGGAGACGGGAGAGGCGGGAGACGGTAGCAGCACCAAGATCCGGCCACCTATCCTCCAGACGAACTGTGGTGCAGCAGCAGCACCCACCGGAAGGGAATTGCAGCCAACCACCACCA C CACCACCACCACCCACCAGTGAAACGATTCTTGAACACACCGTAAATCAATCGATAGTACGCGGGCTGGGACGGAGAACGCAAAAATCGTTTCACATTCTGTAGGGTTTCGTGTTTTTCTTTGCTCCGG ]
[-] EMBL BX611433 [ gATGCCGCAAATGTCCTGTACACACCAAACGCGTCCGCCGCAGCAGCGGTTTTGCGTTTCCTTCTCGTTCCTCATCAGCATGTACTCGTACTCCTTCGTTCGCGGAGACGGGAGAGGCGGGAGACGGT ]
[-] EMBL BM585436 [ ATCGTTCGCGGAGACGGGAGAGGCGGGAGACGGTAGCAGCACCAAGATCCGGCCACCTATCCTCCAGACGAACTGTGGTGCAGCAGCAGCACCCACCGGAAGGGAATTGCAGTCAACCACCACCA CTCACCACCACCACCCACCAGTGAAACGATTCTTGAACACACCGTAAATCAATCGATAGTACGCGGGCTGGGACGGAGAACGCAAAAATCGTTTCACATTCTGTAGGGTTTCGTGTTTTTCTTTGCcgg ]
[-] EMBL BM601625 [ CCACCCACCAGTGAAACGATTCTTGAACACACCGTAAATCAATCGATAGTACGCGGGCTGGGACGGAGAACGCAAAAATCGTTTCACATTCTGTAGGGTTTCGcgg ]
consensusID : consensus_9485#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 768 fasta sequence
[CCCCGAGGTTAATGAGAGAGAAAAAANAANAATACACACTCACTGCATTGAACAAACTAGAATATCTTGCAACCCAAATGTCGCAACAGCNATCACCGAAGAAAGAAACGTCTACCAAGGGCAACAAACAGATCGTGGAGGAAAATGTGGCCAGGCTATANNCTAACCGGAGATGTTGTTCATTGGCAACGTGNACCANTTACTGTGGGTTATTGCCAGCGTGGGGCAGCTGCTCGACATTGGCAGTNGATTCATGANCTGTCCAGATGTCGGTCAGTAGTCCTTNTTGTCCATGCTTACTTACTANTATGGTGGTTTGACTCAGCAAAACCAAATACTTATCCGTAAAGGGACGACATCATCGAGACGTGGTAACGGACTCTCAAGCATTGAANGAGGGCACTCACGGAACACGTGAAAAGACACTCGTGATCCTGACGNGCNCAGTAGAGCAGCNNGTATCCATGCTGNCGGAAGTTCTTCTGGCTGCTGGATTGTTCGCNTGCTCCCGATTTCGGGCCGGCCTGTCTGTTGTTGGCTANNACGGTGTGGTAAAACACGTGTCTTCCACGGGCGATCCTGGCAGAGGAGGCTCCTGTTAATGAAATGAACGCANACCGAAGCTAATGCGAAAGCATGAACCGAGCGCGGACAGTGACATTAATCGTAGACATGATGGTAGNGAGGCTGTTGCAGCGGTCTCTAACAGCCACTATCGCACAAGTGTCATTCATTGTAAGGAAATCAACAGGGATCTTCAAGCAGCAA]
[+] EMBL AL695059 [CCCCGAGGTTAATGAGAGAGAAAAAANAANAATACACACTCACTGCATTGAACAAACTAGAATATCTTGCAACCCAAATGTCGCAACAGCNATCACCGAAGAAAGAAACGTCTACCAAGGGCAACAAACAGATCGTGGAGGAAAATGTGGCCAGGCTATANNCTAACCGGAGATGTTGTTCATTGGCAACGTGNACCANTTACTGTGGGTTATTGCCAGCGTGGGGCAGCTGCTCGACATTGGCAGTNGATTCATGANCTGTCCAGATGTCGGTCAGTAGTCCTTNTTGTCCATGCTTACTTACTANTATGGTGGTTTGACTCAGCAAAACCAAATACTTATCCGTAAAGGGACGACATCATCGAGACGTGGTAACGGACTCTCAAGCATTGAANGAGGGCACTCACGGAACACGTGAAAAGACACTCGTGATCCTGACGNGCNCAGTAGAGCAGCNNGTATCCATGCTGNCGGAAGTTCTTCTGGCTGCTGGATTGTTCGCNTGCTCCCGATTTCGGGCCGGCCTGTCTGTTGTTGGCTANNACGGTGTGGTAAAACACGTGTCTTCCACGGGCGATCCTGGCAGAGGAGGCTCCTGTTAATGAAATGAACGCANACCGAAGCTAATGCGAAAGCATGAACCGAGCGCGGACAGTGACATTAATCGTAGACATGATGGTAGNGAGGCTGTTGCAGCGGTCTCTAACAGCCACTATCGCACAAGTGTCATTCATTGTAAGGAAATCAACAGGGATCTTCAAGCAGCAA]
consensusID : consensus_9485#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 656 fasta sequence
[CCGCGGACGCGTGGGCCGAGGGAGCATAGAGAGAAAAAAATACACACTCACTGCATTGAACAAATTAAAATATCTGCAGCATGTCGCAACAGCAACCGCCGAAAAAGAAAGCTACCAAGGGCAACAAACAGATCGTGGAGGAAAATGTGGCCACGGTTAAGTTTTACCGCAACATGTCGCTCATTGCCACCGCGGTGCAGTTTCTTGGGTTTGCCGTGTATGCGGAGCTGTCCACACTGGCAGTGGTCATGACTGTCCTGTGCGTCGTAGCGCATGTGGCCAGCTATTACTTTATGGCGTTGATCAGCAAACCAAAACTTACCGAAAAGGGAGACATCATCGAGACGGGTACGGACCTCAACATTGAAGGAGGCATCACGGAACACGTGAAAGACATCGTGATCCTGACGGCCGGTACGCAGCTTGTATCCATGCTGTCGGAATTCTTCTGGCTGCTGATGCTGCTGCTCCCGATTCGGGCCGGCTGGCTGTTGTGGCAAACGGTGGGAAAACAGTTCTTCCAGGGCGATCCGGCAGAGGAGGCTCCTGTCAATGAGAAGAAGCAAAAGAAGCTAATGCGAAAGATGAACCGAGCGCGGCAGTGACATTAATCGTGACATGATGGTAGGACGCTGTTGGAACGGTCTACAACAGCC]
[+] EMBL BM595094 [CCGCGGACGCGTGGGCCGAGGGAGCATAGAGAGAAAAAAATACACACTCACTGCATTGAACAAATTAAAATATCTGCAGCATGTCGCAACAGCAACCGCCGAAAAAGAAAGCTACCAAGGGCAACAAACAGATCGTGGAGGAAAATGTGGCCACGGTTAAGTTTTACCGCAACATGTCGCTCATTGCCACCGCGGTGCAGTTTCTTGGGTTTGCCGTGTATGCGGAGCTGTCCACACTGGCAGTGGTCATGACTGTCCTGTGCGTCGTAGCGCATGTGGCCAGCTATTACTTTATGGCGTTGATCAGCAAACCAAAACTTACCGAAAAGGGAGACATCATCGAGACGGGTACGGACCTCAACATTGAAGGAGGCATCACGGAACACGTGAAAGACATCGTGATCCTGACGGCCGGTACGCAGCTTGTATCCATGCTGTCGGAATTCTTCTGGCTGCTGATGCTGCTGCTCCCGATTCGGGCCGGCTGGCTGTTGTGGCAAACGGTGGGAAAACAGTTCTTCCAGGGCGATCCGGCAGAGGAGGCTCCTGTCAATGAGAAGAAGCAAAAGAAGCTAATGCGAAAGATGAACCGAGCGCGGCAGTGACATTAATCGTGACATGATGGTAGGACGCTGTTGGAACGGTCTACAACAGCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9485#0 CCGCGGACGCGTGGGCGGACGCGTGGGTGTGTTTTGACTCGGCAACTACGAAAGCACCAG 60
consensus_9485#2 ---------------------------------------------CCGCGGACGCGTGGG 15
consensus_9485#1 -----------------------------------------------------CCCCGAG 7
* *
consensus_9485#0 CCGAGGGAGCAGAGAGAAAAAAAAATACACACTCACTGCATTGAACAAATTAAAATATCT 120
consensus_9485#2 CCGAGGGAGCATAGAGAGAAAAAAATACACACTCACTGCATTGAACAAATTAAAATATCT 75
consensus_9485#1 GTTAATGAGAGAGAAAAAANAANAATACACACTCACTGCATTGAACAAACTAGAATATCT 67
* *** * * * ** ************************** ** *******
consensus_9485#0 -GCACC----ATGTCGCAACAGCAACCGCCGAAAAAGAAAGC---TACCAAGGGCAACAA 172
consensus_9485#2 -GCAGC----ATGTCGCAACAGCAACCGCCGAAAAAGAAAGC---TACCAAGGGCAACAA 127
consensus_9485#1 TGCAACCCAAATGTCGCAACAGCNATCACCGAAGAAAGAAACGTCTACCAAGGGCAACAA 127
*** * ************* * * ***** ** ** * ***************
consensus_9485#0 ACAGATCGTGGAGGAAAATGTGGCCACGGTTAAGTTTTACCGCAACATGTCGCTCATTGC 232
consensus_9485#2 ACAGATCGTGGAGGAAAATGTGGCCACGGTTAAGTTTTACCGCAACATGTCGCTCATTGC 187
consensus_9485#1 ACAGATCGTGGAGGAAAATGTGGCCA-GGCTATANNCTAACCGGAGATGTTGTTCATTGG 186
************************** ** ** ** * * **** * ******
consensus_9485#0 CACCGCGGTCCAGTTTCTTGGGTTTGCCGTGTATGCGGAGCTG----TCCACACTGGCAG 288
consensus_9485#2 CACCGCGGTGCAGTTTCTTGGGTTTGCCGTGTATGCGGAGCTG----TCCACACTGGCAG 243
consensus_9485#1 CAACGTGNACCANTTACTGTGGGTTATTGCCAGCGTGGGGCAGCTGCTCGACATTGGCAG 246
** ** * ** ** ** ** ** * * ** ** * ** *** ******
consensus_9485#0 TGG--TCATGAC-TGTCC---TGTGCGTC-GTAGCGCATGTGGCCAGCTATTACTT---- 337
consensus_9485#2 TGG--TCATGAC-TGTCC---TGTGCGTC-GTAGCGCATGTGGCCAGCTATTACTT---- 292
consensus_9485#1 TNGATTCATGANCTGTCCAGATGTCGGTCAGTAGTCCTTNTTGTCCATGCTTACTTACTA 306
* * ****** ***** *** *** **** * * * * * ******
consensus_9485#0 -TATGGCG--TTGA-TCAGCAAA-CCAAA-ACTTA-CCGAAAAGGGA-GACATCATCGAG 389
consensus_9485#2 -TATGGCG--TTGA-TCAGCAAA-CCAAA-ACTTA-CCGAAAAGGGA-GACATCATCGAG 344
consensus_9485#1 NTATGGTGGTTTGACTCAGCAAAACCAAATACTTATCCGTAAAGGGACGACATCATCGAG 366
***** * **** ******** ***** ***** *** ******* ************
consensus_9485#0 ACG-GGTA-CGGAC-CTCAA-CATTGAAGGAGG-CA-TCACGGAACACGTGAAA-GACA- 441
consensus_9485#2 ACG-GGTA-CGGAC-CTCAA-CATTGAAGGAGG-CA-TCACGGAACACGTGAAA-GACA- 396
consensus_9485#1 ACGTGGTAACGGACTCTCAAGCATTGAANGAGGGCACTCACGGAACACGTGAAAAGACAC 426
*** **** ***** ***** ******* **** ** ***************** ****
consensus_9485#0 TCGTGATCCTGACGG--CCGGTAC-GCAGCTTGTATCCATGCTGTCGGAA-TTCTTCTGG 497
consensus_9485#2 TCGTGATCCTGACGG--CCGGTAC-GCAGCTTGTATCCATGCTGTCGGAA-TTCTTCTGG 452
consensus_9485#1 TCGTGATCCTGACGNGCNCAGTAGAGCAGCNNGTATCCATGCTGNCGGAAGTTCTTCTGG 486
************** * *** ***** ************ ***** *********
consensus_9485#0 CTGCTGA--TGTTG--CTGCTCCCGATT-CGGGCCGGC-TGGCTGTTGT-GGCAAACG-- 548
consensus_9485#2 CTGCTGA--TGCTG--CTGCTCCCGATT-CGGGCCGGC-TGGCTGTTGT-GGCAAACG-- 503
consensus_9485#1 CTGCTGGATTGTTCGCNTGCTCCCGATTTCGGGCCGGCCTGTCTGTTGTTGGCTANNACG 546
****** ** * *********** ********* ** ******* *** *
consensus_9485#0 --GTGGGAAAACA-GT-TCTTCCA-GGGCGATCC-GGCAGAGGAGGCTCCTGTCAATGAG 602
consensus_9485#2 --GTGGGAAAACA-GT-TCTTCCA-GGGCGATCC-GGCAGAGGAGGCTCCTGTCAATGAG 557
consensus_9485#1 GTGTGGTAAAACACGTGTCTTCCACGGGCGATCCTGGCAGAGGAGGCTCCTGTTAATGAA 606
**** ****** ** ******* ********* ****************** *****
consensus_9485#0 AAGAA-GCAAAA-GAAGCTAATGCGAAAG-ATGAACCGAGCGCGG-CAGTGACATTAATC 658
consensus_9485#2 AAGAA-GCAAAA-GAAGCTAATGCGAAAG-ATGAACCGAGCGCGG-CAGTGACATTAATC 613
consensus_9485#1 ATGAACGCANACCGAAGCTAATGCGAAAGCATGAACCGAGCGCGGACAGTGACATTAATC 666
* *** *** * **************** *************** **************
consensus_9485#0 GT-GACATGATGGTAGG-AGGCTGTTGCAGCGGTCTCTAACAGCCAC-ATCGCAGCAGTG 715
consensus_9485#2 GT-GACATGATGGTAGG-ACGCTGTTGGAACGGTCTACAACAGCC--------------- 656
consensus_9485#1 GTAGACATGATGGTAGNGAGGCTGTTGCAGCGGTCTCTAACAGCCACTATCGCACAAGTG 726
** ************* * ******* * ****** *******
consensus_9485#0 TCCATTCATTGTAAGGAAATCAACACC-ATCTTCAACCAGCAAACCATTCACCGAAAGAA 774
consensus_9485#2 ------------------------------------------------------------
consensus_9485#1 TC-ATTCATTGTAAGGAAATCAACAGGGATCTTCAAGCAGCAA----------------- 768
consensus_9485#0 GGCTCACGTGGTGCTGGTCCACAACACTGTAGCAGTGTGTGTGTGTGTATTCATCGTCTT 834
consensus_9485#2 ------------------------------------------------------------
consensus_9485#1 ------------------------------------------------------------
consensus_9485#0 ACTGTTAAGCGCGACCTCTTGTTTTATGTTGAGTGTGTTTTTTTTGTTTTATTTAGACTG 894
consensus_9485#2 ------------------------------------------------------------
consensus_9485#1 ------------------------------------------------------------
consensus_9485#0 AATATAAATAATTTTCATGCTTTGCTCTGAGCGGCTGCGTAAACGGTGAAAACCATGCTA 954
consensus_9485#2 ------------------------------------------------------------
consensus_9485#1 ------------------------------------------------------------
consensus_9485#0 GCGAAAAGTGACCAAACACTGCCTGGAAGCTTTTCCAGCGCGATTTCTTCACCCAGCGGG 1014
consensus_9485#2 ------------------------------------------------------------
consensus_9485#1 ------------------------------------------------------------
consensus_9485#0 CTTCCTCCTTTTTCAGCTGCTCTATGCCCGTTTCATCCGTCCATATTGCGTTCAGCTGGG 1074
consensus_9485#2 ------------------------------------------------------------
consensus_9485#1 ------------------------------------------------------------
consensus_9485#0 TGCCGAGCATGATCATCGTGAAGACGGCAAACAGTAGCGCTTCCAGTATGAGGAAGAGCA 1134
consensus_9485#2 ------------------------------------------------------------
consensus_9485#1 ------------------------------------------------------------
consensus_9485#0 GCAGTATCACGGTGGCCGGTGGCGAATAGTTGGAACACTCTCTCCACTCGTTTTTGATGC 1194
consensus_9485#2 ------------------------------------------------------------
consensus_9485#1 ------------------------------------------------------------
consensus_9485#0 ACAGGCAGAACTGATTTACGGCCAGAAATATCGAATGGATGGAAATGAATGCGATGTAAA 1254
consensus_9485#2 ------------------------------------------------------------
consensus_9485#1 ------------------------------------------------------------
consensus_9485#0 ACGTAAAAAGTACGAAAAACTTCTGATTGTTCTCCCCGACGCAGTTGTTTATCCACGGAC 1314
consensus_9485#2 ------------------------------------------------------------
consensus_9485#1 ------------------------------------------------------------
consensus_9485#0 AGTGGTGGTCCATCTTGCGTATGCACCGCTGGCAGACGGAACAGTGGTGGGCACGCTCCG 1374
consensus_9485#2 ------------------------------------------------------------
consensus_9485#1 ------------------------------------------------------------
consensus_9485#0 GTTTAATACTGCAGCATTTGGGACATTTGAAAAACACCTGCCCCTCCTGGTAGCCGAGCT 1434
consensus_9485#2 ------------------------------------------------------------
consensus_9485#1 ------------------------------------------------------------
consensus_9485#0 GCTGGATCATTTCCTTCGTGGCGTTTCCTTTCGGTACGGCACCCGGATCGGACAGCATGG 1494
consensus_9485#2 ------------------------------------------------------------
consensus_9485#1 ------------------------------------------------------------
consensus_9485#0 TACGCAGGTGTGATGCAAACGCCAGGAACGAGCCCGTGTTAAAGATAATAAAGTTAATGT 1554
consensus_9485#2 ------------------------------------------------------------
consensus_9485#1 ------------------------------------------------------------
consensus_9485#0 ACCGATAGGCCTTGTAAGGATGGGGCAGCAGGATCACCATTGTGACGACGAATTCCGCAT 1614
consensus_9485#2 ------------------------------------------------------------
consensus_9485#1 ------------------------------------------------------------
consensus_9485#0 ACAATATTAAACCCCACGTTAAAACGGCACAGATAATGCCGCAAATGTCCTGTACACACC 1674
consensus_9485#2 ------------------------------------------------------------
consensus_9485#1 ------------------------------------------------------------
consensus_9485#0 AAACGCGTCCACCGCAGCAGCGGTTTTGCGTTTCCTTCTCGTTCCTCATCAGCATGTACT 1734
consensus_9485#2 ------------------------------------------------------------
consensus_9485#1 ------------------------------------------------------------
consensus_9485#0 CGTACTCCATCGTTCGCGGAGACGGGAGAGGCGGGAGACGGTAGCAGCACCAAGATCCGG 1794
consensus_9485#2 ------------------------------------------------------------
consensus_9485#1 ------------------------------------------------------------
consensus_9485#0 CCACCTATCCTCCAGACGAACTGTGGTGCAGCAGCAGCACCCACCGGAAGGGAATTGCAG 1854
consensus_9485#2 ------------------------------------------------------------
consensus_9485#1 ------------------------------------------------------------
consensus_9485#0 CCAACCACCACCACCACCACCACCACCCACCAGTGAAACGATTCTTGAACACACCGTAAA 1914
consensus_9485#2 ------------------------------------------------------------
consensus_9485#1 ------------------------------------------------------------
consensus_9485#0 TCAATCGATAGTACGCGGGCTGGGACGGAGAACGCAAAAATCGTTTCACATTCTGTAGGG 1974
consensus_9485#2 ------------------------------------------------------------
consensus_9485#1 ------------------------------------------------------------
consensus_9485#0 TTTCGTGTTTTTCTTTGCTCCGGCGG 2000
consensus_9485#2 --------------------------
consensus_9485#1 --------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||