cluster # 95

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Anopheles gambiae
cluster # 95 cluster # 95 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_95#0 length = 643 sequences # 1

consensus_95#1 length = 554 sequences # 1

consensusID : consensus_95#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 643
fasta sequence

                              [CCGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGAAAGGTGTGAAAAGTAATGGCAAAAAAGGGTAAAGAACTGCAAAGCGCCGGAGCAGTAAGTTTAAACTAATATGTAAAGTAATAAACGCTACCGACAAACATTAACGCAACCTCATCGCATACATCCCATTCACTAGCAACATTCAATTTCTTTTTCCCAAACACTCACACACACATGCAGAAAGTGTTAAAGAATGGGAGTAATACAGACAAAAAAAAAACCATAAAAAGAAAAATGGCCGCAAATCTTTAATATACAACACACACACCCACACACATACAAACATATTAACTTAGTATTTGAATAATGATTACGAGACCAAGAAAAAGCCAGTGGGGGAGGTATCCAAAAAAGAAAGGACGAAAGAATGAAAGAGTAAAAATAAATTAATTAAGTTTTCGCTTATTGCTTGTAAGAATTAAAAAGTACGTAATAATCGAATTGCAAACAGATGATAATGGGAAAAAAGAAAAGAAAAGCTACGAGCAAAAGAGATAGAGAAAAATCGACAAAGGAAACAGTTAAACAGTTGATAAAGGAAAGAAAGAAACAAACAAACCCACAAACTGAAAATCAAGGATAAAAAAACTGAAATGAAAGAGG]

[+] EMBL BM648192             [CCGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGAAAGGTGTGAAAAGTAATGGCAAAAAAGGGTAAAGAACTGCAAAGCGCCGGAGCAGTAAGTTTAAACTAATATGTAAAGTAATAAACGCTACCGACAAACATTAACGCAACCTCATCGCATACATCCCATTCACTAGCAACATTCAATTTCTTTTTCCCAAACACTCACACACACATGCAGAAAGTGTTAAAGAATGGGAGTAATACAGACAAAAAAAAAACCATAAAAAGAAAAATGGCCGCAAATCTTTAATATACAACACACACACCCACACACATACAAACATATTAACTTAGTATTTGAATAATGATTACGAGACCAAGAAAAAGCCAGTGGGGGAGGTATCCAAAAAAGAAAGGACGAAAGAATGAAAGAGTAAAAATAAATTAATTAAGTTTTCGCTTATTGCTTGTAAGAATTAAAAAGTACGTAATAATCGAATTGCAAACAGATGATAATGGGAAAAAAGAAAAGAAAAGCTACGAGCAAAAGAGATAGAGAAAAATCGACAAAGGAAACAGTTAAACAGTTGATAAAGGAAAGAAAGAAACAAACAAACCCACAAACTGAAAATCAAGGATAAAAAAACTGAAATGAAAGAGG]




>consensus_95#0
CCGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGAAAGGTGTGAAAAGTAATGGC
AAAAAAGGGTAAAGAACTGCAAAGCGCCGGAGCAGTAAGTTTAAACTAATATGTAAAGTA
ATAAACGCTACCGACAAACATTAACGCAACCTCATCGCATACATCCCATTCACTAGCAAC
ATTCAATTTCTTTTTCCCAAACACTCACACACACATGCAGAAAGTGTTAAAGAATGGGAG
TAATACAGACAAAAAAAAAACCATAAAAAGAAAAATGGCCGCAAATCTTTAATATACAAC
ACACACACCCACACACATACAAACATATTAACTTAGTATTTGAATAATGATTACGAGACC
AAGAAAAAGCCAGTGGGGGAGGTATCCAAAAAAGAAAGGACGAAAGAATGAAAGAGTAAA
AATAAATTAATTAAGTTTTCGCTTATTGCTTGTAAGAATTAAAAAGTACGTAATAATCGA
ATTGCAAACAGATGATAATGGGAAAAAAGAAAAGAAAAGCTACGAGCAAAAGAGATAGAG
AAAAATCGACAAAGGAAACAGTTAAACAGTTGATAAAGGAAAGAAAGAAACAAACAAACC
CACAAACTGAAAATCAAGGATAAAAAAACTGAAATGAAAGAGG

consensusID : consensus_95#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 554
fasta sequence

                              [CCGCGGACGCGTGGGTGAAGTCGTTCGGCGATGCGGAGGTCAGTGGCGAAGAGCTGCACGACATTCTCAAGGAAATCGACACCAACATGAACGGACAGGTCGAGCTGGAGGAGTACCTACAGATGATGTCGGCAATCAAGTCCGGATTTGTATCGCACTCTCGGTTTGCTGCGGTGGCGGAACAGGAAGAAATCCGCAAGGAGCAGGAACGTCTCAAGAAGCAGATCACCATCGAGCGATCTGGAGGTGGCTTATAAGCGCCCGGGCAGGATTATCCGGCCAGGTGGCCCCAATCGATTGGCTTGTCGACGATGCACAATCTTCGCGCCAGTCGATGTGCACCAGCGGGCACCTTGGCTTTGACAAACCTGCCGGCGTTCCTCTTATCCAGCTAAGTGCTGTACCACGAACACGGCTGTTATTTGTGACAATGGATAAATTATGGTTGCTTGCATAACACCCAGGATGACCTTCGCTCCTCTCCAACGCGATAAAATACCTTACTCATCGGCAGTTCCCACGTGCTCCCTGTTGGTTGGAGAATTGATGTTAAG]

[+] EMBL BM642477             [CCGCGGACGCGTGGGTGAAGTCGTTCGGCGATGCGGAGGTCAGTGGCGAAGAGCTGCACGACATTCTCAAGGAAATCGACACCAACATGAACGGACAGGTCGAGCTGGAGGAGTACCTACAGATGATGTCGGCAATCAAGTCCGGATTTGTATCGCACTCTCGGTTTGCTGCGGTGGCGGAACAGGAAGAAATCCGCAAGGAGCAGGAACGTCTCAAGAAGCAGATCACCATCGAGCGATCTGGAGGTGGCTTATAAGCGCCCGGGCAGGATTATCCGGCCAGGTGGCCCCAATCGATTGGCTTGTCGACGATGCACAATCTTCGCGCCAGTCGATGTGCACCAGCGGGCACCTTGGCTTTGACAAACCTGCCGGCGTTCCTCTTATCCAGCTAAGTGCTGTACCACGAACACGGCTGTTATTTGTGACAATGGATAAATTATGGTTGCTTGCATAACACCCAGGATGACCTTCGCTCCTCTCCAACGCGATAAAATACCTTACTCATCGGCAGTTCCCACGTGCTCCCTGTTGGTTGGAGAATTGATGTTAAG]




>consensus_95#1
CCGCGGACGCGTGGGTGAAGTCGTTCGGCGATGCGGAGGTCAGTGGCGAAGAGCTGCACG
ACATTCTCAAGGAAATCGACACCAACATGAACGGACAGGTCGAGCTGGAGGAGTACCTAC
AGATGATGTCGGCAATCAAGTCCGGATTTGTATCGCACTCTCGGTTTGCTGCGGTGGCGG
AACAGGAAGAAATCCGCAAGGAGCAGGAACGTCTCAAGAAGCAGATCACCATCGAGCGAT
CTGGAGGTGGCTTATAAGCGCCCGGGCAGGATTATCCGGCCAGGTGGCCCCAATCGATTG
GCTTGTCGACGATGCACAATCTTCGCGCCAGTCGATGTGCACCAGCGGGCACCTTGGCTT
TGACAAACCTGCCGGCGTTCCTCTTATCCAGCTAAGTGCTGTACCACGAACACGGCTGTT
ATTTGTGACAATGGATAAATTATGGTTGCTTGCATAACACCCAGGATGACCTTCGCTCCT
CTCCAACGCGATAAAATACCTTACTCATCGGCAGTTCCCACGTGCTCCCTGTTGGTTGGA
GAATTGATGTTAAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_95#0      CCGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGAAAGGTGTGAAAAGTAATGGC 60
consensus_95#1      ------------CCGCGGACGCGTGGGTGAAGTCGTTCGGC-GATGCGGAGGTCAGTGGC 47
                                  ************* * *  ***  *   * ** * *    * ****

consensus_95#0      AAAAAAGGGTAAAGAACTGCAAAGCGCCGGAGCAGTAAGTTTAAACTAATATGTAAAGTA 120
consensus_95#1      GAAGAGCTGCACGACATTCTCAAGGAAATCGACACCAA-CATGAACGGACAGGTCGAGCT 106
                     ** *   * *    * *   ***        **  **   * ***  * * **  **  

consensus_95#0      ATAAACGCTACCGACAAACATTAACGCAACCTCATCGCATACATCCCATTCACTAGCAAC 180
consensus_95#1      GGAGGAG-TACCTACAGATG--------ATGTCGGCAATCAAGTCCGGATTTGTATCG-- 155
                      *   * **** *** *          *  **  *    *  ***   *   ** *   

consensus_95#0      ATTCAATTTCTTTTTCCCAAACACTCACACACACATGCAGAAAGTGTTAAAGAATGGGAG 240
consensus_95#1      ---CACTCTCGGTTTGCT--GCGGTGGCGGA-ACAGGAAGAAATCCGCAAGGAGCAGGAA 209
                       ** * **  *** *    *  *  *  * *** * *****     ** **   *** 

consensus_95#0      TAATACAGACAAAAAAAAAACCATAAAAAGA----AAAATGGCCGCAAATCTTTAATATA 296
consensus_95#1      CGTCTCA-AGAAGCAGATCACCATCGAGCGATCTGGAGGTGGCTTATAAGCGCCCGGGCA 268
                         ** * **  * *  *****  *  **     *  ****    ** *        *

consensus_95#0      CAACACACACACCCACACACATACAAACATATTAACTTAGTATT--TGAATAATGATTAC 354
consensus_95#1      GGAT-TATCCGGCCAGGTGGCCCCAATCG-ATTGGCTTGTCGACGATGCACAATCTTCGC 326
                      *   *  *  ***        *** *  ***  ***        ** * ***  *  *

consensus_95#0      GAGACCAAGAAAAAGCCAGTGGGGGAGGTATCCAAAAAAGAAAGGACGAAAGAATGAAAG 414
consensus_95#1      GCCAGTCGATGTGCACCAGCGGGCACCTTGGCTTTGACAAACCTGCCGGCGTTCCTCTTA 386
                    *  *           **** ***     *  *    * * *   * **            

consensus_95#0      AGTAAAAATAAATTA-ATTAAGTTTTCGCTTATTGCTTGTAAGAATTAAAAAGTACGTAA 473
consensus_95#1      TCCAGCTAAGTGCTGTACCACGAACACGGCTGTTATTTGTGACAATGGATAAATTATGGT 446
                       *   *     *  *  * *    **  * **  **** * ***  * ** *      

consensus_95#0      TAATCGAATTGCAAACAGATGATAATGGGAAAAAAGAAAAGAAAAGCTACGAGCAAAAGA 533
consensus_95#1      TGCTTGCATAACACCCAG-----------------GATGACCTTCGCTCCTCTCCAACGC 489
                    *  * * **  **  ***                 **  *     *** *   * ** * 

consensus_95#0      GATAGAGAAAAATCGACAAAGGAAACAGTTAAACAGTTGATAAAGGAAAGAAAGAAACAA 593
consensus_95#1      GATAAAATACCTTACTCATCGGCAGTTCCCACGTGCTCCCTGTTGGTTGGAGAATTGATG 549
                    **** *  *   *   **  ** *      *     *   *   **   ** *       

consensus_95#0      ACAAACCCACAAACTGAAAATCAAGGATAAAAAAACTGAAATGAAAGAGG 643
consensus_95#1      TTAAG--------------------------------------------- 554
                      **