These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9518#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1993 fasta sequence [CCGCGCTTGGTGTGATCGGTCGCAAATTGCTGCCGTTTCTGTACGCTGGTAGAAGTGAAG-TTTTTTTTCTAAGTTTGTTTGTTAGTAGTTGTGAGCAAAAAGTGGCCATCTAATGTAAATGGGAGAGAAGCTGGCTACATCCGTGATTGAATGTGATTTATGTGTACCTCGTTGTGAAAGTGACCACGTTGTTATAAAAAGTAGTTTTATCAGATCTTACGCCATGGCATCCAATATGGAGATGCTGAACGGAGAAATTTTCGGTGATATTAACACCGCATTGTATCAGAATGGAGAAGATTGCCAGTCACTGTTCCGTATGAATACGAATGATTTGCTACCACAGCAAGGTAGCGATTTGAGTGAACTCATGTTGAATGATTTCTTCCACAACAATGGGGTGGCCGAGATGCAGTGTGTGAAGTACGAAACTGATGCAAAACTATTGACCATGCTGGATGGGCGGGAAGAACCGACTCATTACAAGAAAATCCCGGTGCTCGATGATTTCACCCACCCGCTGTTACAGTTCAACGTTGCCATTAGTGGAAAGCCGTGCAGTGCCTCTGCCTGGTGCTATTCGAACGCACTCGAGAAGTTGTTCGTGAAGAAGAAAACTCCGGTCACGTTCGACGTTACCTACATGCAGCCCTCGGACTACAGTCGACTGAAGCTGCGCATCATGTTGGTGTACTCGAACTCACAGTACGCCTACCAAACCATCTCCAGATGCCAGGATGATATAGCGAAGGATGGCGCTAAAGATTTCGCGCACAAAGAGCACGTCGTGCGGTGCCTAAATCCAGACGCTTCCTTCACGGGCCGGGAGAAAGGGGTAAATTTCGAGGATTCGTTTGGCGGTGCTGGTTGACTTGAAC-AATGGCGGCACGCCGCAGCATCTTGAGAAGCAACA-GACTGTGCCAG-TTTCGTTGGAGTTCTTGTGCCAAAACTCATGTCCTACGATGGAAAGGCGCGCCACGACGCTTGTTTTCACGGTGGAAAATGAACACGGCACTCTGCTGGGCAGAAAGTCGATCAGTGTCAAAATCTGCAGCTGCCCGAAGCGTGATATGGAGAAGGACGATAGCAAGGCAACTGGAGGCCGGGAGAATAATAAGAATAAGCGGAAGCATGCTAATGAGGTGGTTCCAAGCAACGATCAACCACCACGAAAGATGACTCGCCAGTCGAGCGTAGATCTGAAATCAACATTGAACAGTAATATCAATGCTACTACCTCTGCTCGCGAATCGGCGGCAGTGCCTGCTGCTGCTGCTACTGCTGCAGCCGCAACACCGCTGCTCGGTCAGATTAAACGTGAGCCTTCGTTTACCCCACTGGGGTATTCGCTGAGCAATCTGTCCAACAGTAGCAACAGCGCGATCGACAACGACAGTTCGGCAGTCGTGCTGACCCTGAGGCTGCCGGATTTGGCGTGCGCCTCCGAGGTGGCGATGTACGCATTCAAA-CATTTGAGTTCGATCCTTATCAGCTGCAAGGACGAGA-AGGACAAGAATCGATACGCTCAATACCTCTCCCATTGCCGACGCGTAAGGAGTAAGTATGCTTCGAGTCACCGTTAGACTGTCAATCCTTTTTTGCCATTTCATCGTATTTCCAATTAAGAATTGTGGTCTAATGTGCCAATTCCTTTGATTTTTTATGACGACTGTAAACACTTATTTCACCTCC--A--ACACACTGTCGATTTTTCTTTATCACTATATTTTTAATAATCAAATTCCCCTTGCCTGAGCTATGGGGGATGTGTCATGTGTCGTTATTCAGCCGTAGAATGGAGATACACGGGTAGTGGTTTGCGGAAGAGGGCTATGCTCGAGACATGCCTGTGACACGAGACTAGGGTGGAGACATCTCTCTCTCTAGAGATTCGTACTATAACCGAGCTTATAGTGCACGTACCATGCAGTACAAAATGATGAAAAAATGATGTGAGGTTTCTCAGTTTGCAAATCGAAAAAAGGCAAGAGCCATT] [+] EMBL BM602220 [CCGCGCTTGGTGTGATCGGTCGCAAATTGCTGCCGTTTCTGTACGCTGGTAGAAGTGAAG TTTTTTTTCTAAGTTTGTTTGTTAGTAGTTGTGAGCAAAAAGTGGCCATCTAATGTAAATGGGAGAGAAGCTGGCTACATCCGTGATTGAATGTGATTTATGTGTACCTCGTTGTGAAAGTGACCACGTTGTTATAAAAAGTAGTTTTATCAGATCTTACGCCATGGCATCCAATATGGAGATGCTGAACGGAGAAATTTTCGGTGATATTAACACCGCATTGTATCAGAATGGAGAAGATTGCCAGTCACTGTTCCGTATGAATACGAATGATTTGCTACCACAGCAAGGTAGCGATTTGAGTGAACTCATGTTGAATGATTTCTTCCACAACAATGGGGTGGCCGAGATGCAGTGTGTGAAGTACGAAACTGATGCAAAACTATTGACCATGCTGGATGGGCGGGAAGAACCGACTCATTACAAGAAAATCCCGGTGCTCGATGATTTCACCCACCCGCTGCTACAGTTCAACGTTGCCATTAGTGGAAAGCCGTGCAGTGCCTCTGCCTGGTGCTATTCGAACGCACTCGAGAAGTTGTTCGTGAAGAAGAAAACTCCGGTCACGTTCGACGTTACCTACATGCAGCCCTCGGACTACAGTCGACTGAAGCTGCGCATCATGTTGGTGTACTCGA ] [+] EMBL BM618996 [ GCGCTTGGTGTGATCGGTCGCAAATTGCTGCCGTTTCTGTACGCTGGTAGAAGTGAAG TTTTTTTTCTAAGTTTGTTTGTTAGTAGTTGTGAGCAAAAAGTGGCCATCTAATGTAAATGGGAGAGAAGCTGGCTACATCCGTGATTGAATGTGATTTATGTGTACCTCGTTGTGAAAGTGACCACGTTGTTATAAAAAGTAGTTTTATCAGATCTTACGCCATGGCATCCAATATGGAGATGCTGAACGGAGAAATTTTCGGTGATATTAACACCGCATTGTATCAGAATGGAGAAGATTGCCAGTCACTGTTCCGTATGAATACGAATGATTTGCTACCACAGCAAGGTAGCGATTTGAGTGAACTCATGTTGAATGATTTCTTCCACAACAATGGGGTGGCCGAGATGCAGTGTGTGAAGTACGAAACTGATGCAAAACTATTGACCATGCTGGATGGGCGGGAAGAACCGACTCATTACAAGAAAATCCCGGTGCTCGATGATTTCACCCACCCGCTGCTACAGTTCAACGTTGCCATTAGTGGAAAGCCGTGCAGTGCCTCTGCCTGGTGCTATTCGAACGCACTCGAGAAGTTGTTCGTGAAGAAGAAAACTCCGGTCACGTTCGACGTTACCTA ] [+] EMBL BM643809 [ GATCGGTCGCAAATCGGCATCGTTTCCGTATGCTGGTAGAAGTGAAGTTTTTTTTTCTAAGTTTGTTTGTTAGTAGTTGTGAGCAAAAAGTGGCCATCTAATGTAAATGGGAGAGAAGCTGGCTACATCCGTGATTGAATGTGATTTATGTGTACCTCGTTGTGAAAGTGACCACGTTGTTATAAAAAGTAGTTTTATCAGATCTTACGCCATGGCA ] [+] EMBL BM575914 [ ccgCGCAAATCGGCATCGTTTCCGTATGCTGGTAGAAGTGAAGTTTTTTTTTCTAAGTTTGTTTGTTAGTAGTTGTGAGCAAAAAGTGGCCATCTAATGTAAATGGGAGAGAAGCTGGCTACATCCGTGATTGAATGTGATTTATGTGTACCTCGTTGTGAAAGTGACCACGTTGTTATAAAAAGTAGTTTTATCAGATCTTACGCCATGGCATCCAATATGGAGATGCTGAACGGAGAAATTTTCGGTGATATTAACACCGCATTGTATCAGAATGGAGAAGATTGCCAGTCACTGTTCCGTATGAATACGAATGATTTGCTACCACAGCAAGGTAGCGATTTGAGTGAACTCATGTTGAATGATTTCTTCCACAACAATGGGGTGGCCGAGATGCAGTGTGTGAAGTACGAAACTGATGCAAAACTATTGACCATGCTAGATGGGCGGGAAGAACCGACTCATTACAAGAAAATCCCGGTGCTCGATGATTTCACCCACCCGCTGTTACAGTTCAACGTTGCCATTAGTGGAAAGCCGTGCAGTGCCTCTGCCTGGTGCTATTCGAACGCACTGGAGAAGTTGTTCGTGAAGAAGAAAACTCCGGTCACGTTCGACGTCACCTACATGCAGCCCTCGGACTACAGTCGACTGAAGCTGCGTATCATGTTGGT ] [+] EMBL CNS09BKT [ CTCGTTGTGAAAGTCACCACGTTGTTATAAAAAGTAGTTTTATCAGATCTTACGCCATGGCATCCAATATGGAGATGCTGAACGGAGAAATTTTCGGTGATATTAACACCGCATTGTATCAGAATGGAGAAGATTGCCAGTCACTGTTCCGTATGAATACGAATGATTTGCTACCACAGCAAGGTAGCGATTTGAGTGAACTCATGTTGAATGATTTCTTCCACAACAATGGGGTGGCCGAGATGCAGTGTGTGAAGTACGAAACTGATGCAAAACTATTGACCATGCTGGATGGGCGGGAAGAACCGACTCATTACAAGAAAATCCCGGTGCTCGATGATTTCACCCACCCGCTGTTACAGTTCAACGTTGCCATTAGTGGAAAGCCGTGCAGTGCCTCTGCCTGGTGCTATTCGAACGCACTCGAGAAGTTGTTCGTGAAGAAGAAAACTCCGGTCACGTTTGACGTTACCTACATGCAGCCATCGGACTACAGTCGACTGAAGCTGCGCATCATGTTGGTGTACTCGAACTCACAGTACGCCTACCAAACCATCTCCAGATGCCAGGATGATATAGCGAAGGATGGCGCTAAAGATTTCGCGCACAAAGAGCACGTCGTGCGGTGCCTAAATCCAGACGCTTCCTTCACGGGCCGGGAGAAAGGGG ] [+] EMBL CNS09QQ8 [ ATTTGCTACCACAGCAAGGTAGCGATTTGAGTGAACTCATGTTGAATGATTTCTTCCACAACAATGGGGTGGCCGAGATGCAGTGTGTGAAGTACGAA ] [+] EMBL BM578217 [ ccGGTAGCGATTTGAGTGAACTCATGTTGAATGATTTCTTCCACAACAACGGGGTGGCCGAGATGCAGTGTGTGAAGTACGAAACTGATGCAAAACTATTGACCATGCTAGATGGGCGGGAAGAACCGACTCATTACAAGAAAATCCCGGTGCTCGATGATTTCACCCACCCGCTGTTACAGTTCAACGTTGCCATTAGTGGAAAGCCGTGCAGTGCCTCTGCCTGGTGCTATTCGAACGCACTCGAGAAGTTGTTCGTGAAGAAGAAAACTCCGGTCACGTTTGACGTTACCTACATGCAGCCATCGGACTACAGTCGACTGAAGCTGCGCATCATGTTGGTGTACTCGAACTCACAGTACGCCTACCAAACCATCTCCAGATGCCAGGATGATATAGCGAAGGATGGCGCTAAAGATTTCGCGCACAAAGAGCACGTCGTGCGGTGCCTAAATCCAGACGCTTCCTTCACGGGCCGGGAGAAAGGGGTAAATTTCGAGGATTCGTTTGGCGGTGCTGGTTGACTTGAAC AATGGCGGCACGCCGCAGCATCTTGAGAAGCAACAGGACTGTGCCAGTTTTCGTTGGAGTTCTTGTGCCAAAACTCATGTCCTACGATGGAAAGGCGCGCCACGACGCTTGTTTTCACGGTGG AAATGAACACGGCACTCTGCTGG ] [-] EMBL CNS09BKU [ GGAGAAAGGGGTAAATTTCGAGGA TCGTTTGGCGGTGCTGGTTGACTTGAACAAATGGCGGCACGCCGCAGCATCTTGAGAAGCAACA GACTGTGCCAG TTTCGTTGGAGTTCTTGTGCCAAAACTCATGTCCTACGATGGAAAGGCGCGCCACGACGCTTGTTTTCACGGTGGAAAATGAACACGGCACTCTGCTGGGCAGAAAGTCGATCAGTGTCAAAATCTGCAGCTGCCCGAAGCGTGATATGGAGAAGGACGATAGCAAGGCAACTGGAGGCCGGGAGAATAATAAGAATAAGCGGAAGCATGCTAATGAGGTGGTTCCAAGCAACGATCAACCACCACGAAAGATGACTCGCCAGTCGAGCGTAGATCTGAAATCAACATTGAACAGTAATATCAATGCTACTACCTCTGCTCGCGAATCGGCGGCAGTGCCTGCTGCTGCTGCTACTGCTGCAGCCGCAACACCGCAGCTCGGTCAGATTAAACGTGAGCCTTCGTTTACCCCACTGGGGTATTCGCTGAGCAATCTGTCCAACAGTAGCAACAGCGCGATCGACAACGACAGTTCGGCAGTCGTGCTGACCCTGAGGCTGCCGGATTTGGCGTGCGCCTCCGAGGTGGCGATGTACGCATTCAAA CATTTGAGTTCGATCCTTATCAGCTGCAAGGACGAGAGAGGACAAGAATCGATACGCTCAATACCTCTCCCATTGCCGACGCGTAAGGAGTAAGTATGCTTCGAGTCACCGTTAGACTGTCAATCCTTTTTTGCCATTT ] [+] EMBL AL932437 [ cccgaggtcACA GACTGTGCCAG TTTCGTTGGAGTTCTTGTGCCAAAACTCATGTCCTACGATGGAAAGGCGCGCCACGACGCTTGTTTTCACGGTGGAAAATGAACACGGCACTCTGCTGGGCAGAAAGTCGATCAGTGTCAAAATCTGCAGCTGCCCGAAGCGTGATATtg ] [+] EMBL BM634084 [ ccGAAGCATGCTAATGAGGTGGTTCCAAGCAACGATCAACCACCACGAAAGATGACTCGCCAGTCGAGCGTAGATCTGAAATCAACATTGAACAGTAATATCAATGCTACTACCTCTGCTCGCGAATCGGCGGCAGTGCCTGCTGCTGCTGCTACTGCTGCAGCCGCAACACCGCTGCTCGGTCAGATTAAACGTGAGCCTTCGTTTACCCCACTGGGGTATTCGCTGAGCAATCTGTCCAACAGTAGCAACAGCGCGATCGACAACGACAGTTCGGCAGTCGTGCTGACCCTGAGGCTGCCGGATTTGGCGTGCGCCTCCGAGGTGGCGATGTACGCATTCAAA CATTTGAGTTCGATCCTTATCAGCTGCAAGGACGAGA AGGACAAGAATCGATACGCTCAATACCTCTCCCATTGCCGACGCGTAAGGAGTAAGTATGCTTCGAGTCACCGTTAGACTCTCAATCCTTTTTTGCCATTTCATCGTATTTCCAATTAAGAATTGTGGTCTAATGTGCCAATTCCTTTGATTTTTTATGACGACTGTAAACACTTATTTCACCTCCCAACCACACACTGTCGATTTTTCTTTATCACTATATTTTTAATAATCAAATTCCCCTTGCCTGAGCTATGGGGGATGTGTCATGTGTCGTTATTCAGCCGTAGAATG ] [-] EMBL CNS09QQ9 [ GAGGTGGTTCCAAGCAACGATCAACCACCACGAAAGATGACTCGCCAGTCGAGCGTAGATCTGAAATCAACATTGAACAGTAATATCAATGCTACTACCTCTGCTCGCGAATCGGCGGCAGTGCCTGCTGCTGCTGCTACTGCTGCAGCCGCAACACCGCTGCTCGGTCAGATTAAACGTGAGCCTTCGTTTACCCCACTGGGGTATTCGCTGAGCAATCTGTCCAACAGTAGCAACAGCGCGATCGACAACGACAGTTCGGCAGTCGTGCTGACCCTGAGGCTGCCGGATTT GCGTGCGCCTCCGAGGTGGCGATGTACGCATTCAAAGCATTTGAGTTCGATCCTTATCAGCTGCAAGGACGAGA AGGACAAGAATCGATACGCTCAATACCTCTCCCATTGCCGACGCGTAAGGAGTAAGTATGCTTCGAGTCACCGTTAGACCGT ] [+] EMBL BM593199 [ ccgGTGCGCCTCCGAGGTGGCGATGTACGCATTCAAA CATTTGAGTTCGATCCTTATCAGCTGCAAGGACGAGA AGGACAAGAATCGATACGCTCAGTACCTCTCCCATTGCCGACGCGTAAGGAGTAAGTATGCTTCGAGTCACCGTTAGACTCTCAATCCTTTTTTGCCATTTCATCGTTTTTCCAATTCAGAATTGTTGTCCAATGTGCCAATTCCTTTGATTTTTTATGACGACTGTAAACACTTATTTCACCTCC A ACACACTGTCGATTTTTCTTTATCACTATATTTTTAATAATCCAATTCCCCTTGCCTGAGCTATGGGGGATGTGTCATGTGTCGTTATTCAGCCGTAGAATGGAGATACACGGGTAGTGGTTTGCGGAAGAGGGCTATGCTCGAGACATGCCTGTGACACGAGACTAGGGTGGAGACATCTCTCTCTCTAGAGATTCGTACTATAACCGAGCTTATAGTGCACGTACCATGCAGTACAAAATGATGAAAAAATGATGTGAGGTTTCTCAGTTTGCAAATCGAAAAAAGGCAAGAGCCATT] consensusID : consensus_9518#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1159 fasta sequence [AAGCGGAACATGCTAATGAGGTGGTTCCAAGCAACGATCAACCACCGAAAGATGACTCGCCAGTCGAGTGTAGATCTGAAATCAACATTGAACAGCAATATCAATGCTACTACCTCTGCCCGCGAATCGGCGGCAGTGCCTGCTGCTGCTGCAGCAGCAGATAACCCCGCTGCTCGGTCAGATTAAACGTGAGCCTTCGTTTACCCCACTGGGGTATTCGCTGAGCAATCTGTCCAACAGCAGCAACAGCGCGATCGACAACGACAGTTCGGCAGTCGTGCTGACCCTTCGGCTGCCGGATTTGGCGTGCGCCTCCGAGGTGGCGATGTACGCATTCAAACATTTGAGTTCGATCCTTATCAGCTGCAAGGACGAGAAGGACAAGAATCGATACGCTCAATACCTCTCCCATTGCCGACGCGTAAGGAAAGATTTCGAGAGATCCGCGCAAATGCAAGAAGAACCGAGCCCGGAATGCGATTCCTCTATGTAGTAGACTGCCCCACCGCGGACACACGTGTACTACGCCACCATCGCGCCAAGAAACGTAATTTAGGGTTGTCATGATGTTTTAGAGTAACTTCATTCTTAATTGTGTAAAGTAACTTAAGAGATGTTCGATAAGATAAGATAAGCATACTATAGTAAGCATGTCTCGATGAGGGTTTAATTGATTGTATCTGTAAAATAACTGATATCATTTCGCATCAGATGCATAGGCGTTTGTGAGGTAACGTAGTTAAAAAAAAGTGATGAGATAATGCACCTGTGCAGTACATTCACTCACAAGGAAGGTTCGCTTCGTATTCGGCTAGTAAGGAGACAGCTTTTATTCCTTGTTAAAATACGGTTAATATTAGTGGATAGAATCATGAACAAAAGATATGTTTTGATAACATACTATAACGATCGAATTAGCAAGTAAGACTTCTGATATATGGTTAATTGATAACAATAACGATTAAGAGTATTTTGTGGTTAAGAGTTAAACAAAGAACATAGATCTAACTTAATTCCAAGTGAATAAGTAACATTTAACAGATGCGTCAGTACGCTCCCAATACACGTTTTTCGTGAAATGAGTAAAACAATAACAAAAGAGAGCAAAAAACAATACAATACAAAAAAACTCCAAAAAGAGACGAAAATCATACGTAAA] [+] EMBL CNS09EWK [AAGCGGAACATGCTAATGAGGTGGTTCCAAGCAACGATCAACCACCGAAAGATGACTCGCCAGTCGAGTGTAGATCTGAAATCAACATTGAACAGCAATATCAATGCTACTACCTCTGCCCGCGAATCGGCGGCAGTGCCTGCTGCTGCTGCAGCAGCAGATAACCCCGCTGCTCGGTCAGATTAAACGTGAGCCTTCGTTTACCCCACTGGGGTATTCGCTGAGCAATCTGTCCAACAGCAGCAACAGCGCGATCGACAACGACAGTTCGGCAGTCGTGCTGACCCTTCGGCTGCCGGATTTGGCGTGCGCCTCCGAGGTGGCGATGTACGCATTCAAACATTTGAGTTCGATCCTTATCAGCTGCAAGGACGAGAAGGACAAGAATCGATACGCTCAATACCTCTCCCATTGCCGACGCGTAAGGAAAGATTTCGAGAGATCCGCGCAAATGCAAGAAGAACCGAGCCCGGAATGCGATTCCTCTATGTAGTAGACTGCCCCACCGCGGACACACGTGTACTACGCCACCATCGCGCCAAGAAACGTAATTTAGGGTTGTCATGATGTTTTAGAGTAACTTCATTCTTAATTGTGTAAAGTAACTTAAGAGATGTTCGATAAGATAAGATAAGCATACTATAGTAAGCATGTCTCGATGAGGGTTTAATTGATTGTATCTGTAAAATAACTGATATCATTTCGCATCAGATGCATAGGCGTTTGTGAGGTAACGTAGTTAAAAAAAAGTGATGAGATAATGCACCTGTGCAGTACATTCACTCACAAGGAAGGTTCGCTTCGTATTCGGCTAGTAAGGAGACAGCTTTTATTCCTTGTTAAAATACGGTTAATATTAGTGGATAGAATCATGAACAAAAGATATGTTTTGATAACATACTATAACGATCGAATTAGCAAGTAAGACTTCTGATATATGGTT ] [-] EMBL CNS09EWL [ AACAGCAGCAACAGCGCGATCGACAACGACAGTTCGGCAGTCGTGCTGACCCTTCGGCTGCCGGTTTTGGCGTGCGCCCCCGAGGTGGCGATGTACGCATTCAAACATTTGAGTTCGATCCTTATCAGCTGCAAGGACGAGAAGGACAAGAATCGATACGCTCAATACCTCTCCCATTGCCGACGCGTAAGGAAAGATTTCGAGAGATCCGCGCAAATGCAAGAAGAACCGAGCCCGGAATGCGATTCCTCTATGTAGTAAACTGCCCCACCGCGGACACACGTGTACTACGCCACCATCGCGCCAAGAAACGTAATTTAGGGTTGTCATGATGTTTTAGAGTAACTTCATTCTTAATTGTGTAAAGTAACTTAAGAGATGTTCGATAAGATAAGATAAGCATACTATAGTAAGCATGTCTCGATGAGGGTTTAATTGATTGTATCTGTAAAATAACTGATATCATTTCGCATCAGATGAATAGGCGTTTGTGAGGTAACGTAGTTAAAAAAAAGTGATGAGATAATGCACCTGTGCAGTACATTAACTCACAAGGAAGGTTCGCTTCGTATTCGGCTAGTAAGGAGACAGCTTTTATTCCTTGTTAAAATACGGTTAATATTAGTGGATAGAATCATGAACAAAAGATATGTTTTGATAACATACTATAACGATCGAATTAGCAAGTAAGACTTCTGATATATGGTTAATTGATAACAATAACGATTAAGAGTATTTTGTGGTTAAGAGTTAAACAAAGAACATAGATCTAACTTAATTCCAAGTGAATAAGTAACATTTAACAGATGCGTCAGTACGCTCCCAATACACGTTTTTCGTGAAATGAGTAAAACAATAAC AAGAGAGCAAAAAACAATACAATACAAAAAAACTCCA ] [-] EMBL AGA284101 [ TGAGATAATGCACCTGTGCAGTACATTCACTCACAAGGAAGGTTCGCTTCGTATTCGGCTAGTAAGGAGACAGCTTTTATTCCTTGTTAAAATACGGTTAATATTAGTGGATAGAATCATGAACAAAAGATATGTTTTGATAACATACTATAACGATCGAATTAGCAAGTAAGACTTCTGATATATGGTTAATTGATAACAATAACGATTGAGAGTATTTTGTGGTTAAGAGTTAAACAAAGAACATAGATCTAACTTAATTCCAAGTGAATAAGTAACATTTAACAGATGCGTCAGTACGCTCCCAATACACGTTTTTCGTGAAATGAGTAAAAGAATAACAAAAGAGAGCAAAAAACAATACTATACAAAAAATCACCAAAAAGAGACGAAAATCATACGTAAA] [-] EMBL CNS09RSE [ AGTGGATAGAATCATGAACAAAAGATATGTTTTGATAACATACTATAACGATCGAATTAGCAAGTAAGACTTCTGATATATGGTTAATTGATAACAATAACGATTAAGAGTATTTTGTGGTTAAGAGTTAAACAAAGAACATAGATCTAACTTAATTCCAAGTGAATAAGTAACATTTAAAAGATGCGTCAGTACGCTCCCAATAAACGTTTTTCGTGAAATGAGTAAAACAATAACAA ] consensusID : consensus_9518#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 431 fasta sequence [AAGTGTTACCAATCTGATGTTGGAGCGGCGCCACCATCGCGCTAAGAAACGTAATTTAGGGTTGTCATGATGTTTTACAGTAACTTCATTCTTAATTGTGTAAAGTAACTTAAAAGATGTTCGATAAGATAAGATAAGCATACTATAGTAAGCATGTCTCGATGAGGGTTTAATTGTTTGTATCTGTAAAATAACTGATATCATTTCGCATCAGATGCATAGGCGTTTGTGAGGTAACGTAGTTAAAAAAAAGTGATGAGATAATGCACCTGTGCAGTACATTCACTCACAAGGAAGGTTCGCTTCGTATTCGGCTAGTAAGGAGACAGCTTTTATTCCTTGTTAAAATACGGTTAATATTAGTGGATAGAATCATGAACAAAAGATATGTTTTGATAACATACTATAACGATCGAATTAGCAAGTAAGAC] [+] EMBL AGA285398 [AAGTGTTACCAATCTGATGTTGGAGCGGCGCCACCATCGCGCTAAGAAACGTAATTTAGGGTTGTCATGATGTTTTACAGTAACTTCATTCTTAATTGTGTAAAGTAACTTAAAAGATGTTCGATAAGATAAGATAAGCATACTATAGTAAGCATGTCTCGATGAGGGTTTAATTGTTTGTATCTGTAAAATAACTGATATCATTTCGCATCAGATGCATAGGCGTTTGTGAGGTAACGTAGTTAAAAAAAAGTGATGAGATAATGCACCTGTGCAGTACATTCACTCACAAGGAAGGTTCGCTTCGTATTCGGCTAGTAAGGAGACAGCTTTTATTCCTTGTTAAAATACGGTTAATATTAGTGGATAGAATCATGAACAAAAGATATGTTTTGATAACATACTATAACGATCGAATTAGCAAGTAAGAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9518#1 ------------------------------------------------------------ consensus_9518#2 ------------------------------------------------------------ consensus_9518#0 CCGCGCTTGGTGTGATCGGTCGCAAATTGCTGCCGTTTCTGTACGCTGGTAGAAGTGAAG 60 consensus_9518#1 ------------------------------------------------------------ consensus_9518#2 ------------------------------------------------------------ consensus_9518#0 TTTTTTTTCTAAGTTTGTTTGTTAGTAGTTGTGAGCAAAAAGTGGCCATCTAATGTAAAT 120 consensus_9518#1 ------------------------------------------------------------ consensus_9518#2 ------------------------------------------------------------ consensus_9518#0 GGGAGAGAAGCTGGCTACATCCGTGATTGAATGTGATTTATGTGTACCTCGTTGTGAAAG 180 consensus_9518#1 ------------------------------------------------------------ consensus_9518#2 ------------------------------------------------------------ consensus_9518#0 TGACCACGTTGTTATAAAAAGTAGTTTTATCAGATCTTACGCCATGGCATCCAATATGGA 240 consensus_9518#1 ------------------------------------------------------------ consensus_9518#2 ------------------------------------------------------------ consensus_9518#0 GATGCTGAACGGAGAAATTTTCGGTGATATTAACACCGCATTGTATCAGAATGGAGAAGA 300 consensus_9518#1 ------------------------------------------------------------ consensus_9518#2 ------------------------------------------------------------ consensus_9518#0 TTGCCAGTCACTGTTCCGTATGAATACGAATGATTTGCTACCACAGCAAGGTAGCGATTT 360 consensus_9518#1 -AAGCGGAACATGCTAATGAGGTGGTTCCAAGCAACGATCAACCACCGAAAGATGACTCG 59 consensus_9518#2 ------------------------------------------------------------ consensus_9518#0 GAGTGAACTCATGTTGAATGATTTCTTCCACAACAATGGGGTGGCCGAGATGCAGTGTGT 420 consensus_9518#1 CCAGTCGAGTGTAGATCTGAAATCAACATTGAACAGCAATATCAATGCTACTACCTCTGC 119 consensus_9518#2 ------------------------------------------------------------ consensus_9518#0 GAAGTACGAAACTGATGCAAAACTATTGACCATGCTGGATGGGCGGGAAGAACCGACTCA 480 consensus_9518#1 CCGCGAATCGGCGGCAGTGCCTGCTGCTGCTGCAGCAGCAGATAACCCCGCTGCTCGGTC 179 consensus_9518#2 ------------------------------------------------------------ consensus_9518#0 TTACAAGAAAATCCCGGTGCTCGATGATTTCACCCACCCGCTGTTACAGTTCAACGTTGC 540 consensus_9518#1 AGATTAAACGTGAGCCTTCGTTTACCCCACTGGGGTATTCGCTGAGCAATCTGTCCAACA 239 consensus_9518#2 ------------------------------------------------------------ consensus_9518#0 CATTAGTGGAAAGCCGTGCAGTGCCTCTGCCTGGTGCTATTCGAACGCACTCGAGAAGTT 600 consensus_9518#1 GCAGCAACAGCGCGATCGACAACGACAGTTCGGCAGTCGTGCTGACCCTTCGGCTGCCGG 299 consensus_9518#2 ------------------------------------------------------------ consensus_9518#0 GTTCGTGAAGAAGAAAACTCCGGTCACGTTCGACGTTACCTACATGCAGCCCTCGGACTA 660 consensus_9518#1 ATTTGGCGTGCGCCTCCGAGGTGGCGATGTACGCATTCAAACATTTGAGTTCGATCCTTA 359 consensus_9518#2 ------------------------------------------------------------ consensus_9518#0 CAGTCGACTGAAGCTGCGCATCATGTTGGTGTACTCGAACTCACAGTACGCCTACCAAAC 720 consensus_9518#1 TCAGCTGCAAGGACGAGAAGGACAAGAATCGATACGCTCAATACCTCTCCCATTGCCGAC 419 consensus_9518#2 ------------------------------------------------------------ consensus_9518#0 CATCTCCAGATGCCAGGATGATATAGCGAAGGATGGCGCTAAAGATTTCGCGCACAAAGA 780 consensus_9518#1 GCGTAAGGAAAGATTTCGAGAGATCCGCGCAAATGCAAGAAGAACCGAGCCCGGAATGCG 479 consensus_9518#2 ------------------------------------------------------------ consensus_9518#0 GCACGTCGTGCGGTGCCTAAATCCAGACGCTTCCTTCACGGGCCGGGAGAAAGGGGTAAA 840 consensus_9518#1 ATTCCTCTATGTAGTAGACTGCCCCA-CCGCGGACA-CACGTGTACTACGCCAC--CATC 535 consensus_9518#2 ------------------AAGTGTTA-CCAATCTGA-TGTTGGAGCGGCGCCAC--CATC 38 consensus_9518#0 TTTCGAGGATTCGTTTGGCGGTGCTGGTTGACTTGAACAATGGCGGCACGCCGCAGCATC 900 * * * **** * **** consensus_9518#1 GCGCCAAGAAACGTAATTTAGGGTTGTCAT-GATGTTTTAGAGT--AACTTCATTCTTAA 592 consensus_9518#2 GCGCTAAGAAACGTAATTTAGGGTTGTCAT-GATGTTTTACAGT--AACTTCATTCTTAA 95 consensus_9518#0 TTGAGAAGCAACAGACTGTGCCAGTTTCGTTGGAGTTCTTGTGCCAAAACTCATGTCCTA 960 * *** *** * * * * ** * * *** * * ** **** * consensus_9518#1 TTGTGTAAAG---TAACTTAAGAGATGTT----CGATAAGATAAGATAAGCATACTATAG 645 consensus_9518#2 TTGTGTAAAG---TAACTTAAAAGATGTT----CGATAAGATAAGATAAGCATACTATAG 148 consensus_9518#0 CGATGGAAAGGCGCGCCACGACGCTTGTTTTCACGGTGGAAAATGAACACGGCACTCTGC 1020 ** **** * * **** ** * * * ** * *** * consensus_9518#1 TAAGCATGTC-TCGATGAGGGTTTAATTGATTGTATCTGTAAAATAACTGATATCATTTC 704 consensus_9518#2 TAAGCATGTC-TCGATGAGGGTTTAATTGTTTGTATCTGTAAAATAACTGATATCATTTC 207 consensus_9518#0 TGGGCAGAAAGTCGATCAGTGTCAAA--ATCTGCAGCTGCCCGAAGCGTGATATGGAGAA 1078 * *** ***** ** ** ** ** * *** * ****** consensus_9518#1 GCATCA----GATGCA--TAGGCGTTTGTGAGGTAACGTAGTTAAAAAAAAGTGATGAGA 758 consensus_9518#2 GCATCA----GATGCA--TAGGCGTTTGTGAGGTAACGTAGTTAAAAAAAAGTGATGAGA 261 consensus_9518#0 GGACGATAGCAAGGCAACTGGAGGCCGGGAGAATAATAAGAATAAGCGGAAGCATGCTAA 1138 * * * * *** * * * * *** *** *** * consensus_9518#1 TAATGCACCTGTGCAGTACATTCACTCACAAGGAAGGTTCGCTTCGTATTCG---GCTAG 815 consensus_9518#2 TAATGCACCTGTGCAGTACATTCACTCACAAGGAAGGTTCGCTTCGTATTCG---GCTAG 318 consensus_9518#0 TGAGGTGGTTCCAAGCAACGATCAACCACCACGAAAGATGACTCGCCAGTCGAGCGTAGA 1198 * * * * ** *** *** * *** * * ** * *** * consensus_9518#1 TAAGGAGACAGCTTTTATTCCTTGTTAAAATACGGTTAATATTAGTGGATAGAATCATGA 875 consensus_9518#2 TAAGGAGACAGCTTTTATTCCTTGTTAAAATACGGTTAATATTAGTGGATAGAATCATGA 378 consensus_9518#0 TCTGAAATCAACATTGAACAGTAATATCAATGCTACTACCTCTGCTCGC--GAATCGGCG 1256 * * * ** * ** * * * *** * ** * * * ***** consensus_9518#1 ACAAAAGATA-TGTT-TTGATAACA-TACTATAACGATCGAATTAGCAAGTAAGACTTCT 932 consensus_9518#2 ACAAAAGATA-TGTT-TTGATAACA-TACTATAACGATCGAATTAGCAAGTAAGAC---- 431 consensus_9518#0 GCAGTGCCTGCTGCTGCTGCTACTGCTGCAGCCGCAACACCGCTGCTCGGTCAGATTAAA 1316 ** * ** * ** ** * * * * * ** *** consensus_9518#1 GATATATGGTTAATTGATAACAATAACGATTAAGAGTATTTTGTGGTTAAGAGTTAAACA 992 consensus_9518#2 ------------------------------------------------------------ consensus_9518#0 CGTGAGCCTTCGTTTACCCCACTGGGGTATTCGCTGAGCAATCTGTCCAACAGTAGCAAC 1376 consensus_9518#1 AAGAACATAGATCTAACTTAATTCCAAGTGAATAAGTAACATTTAACAGATGCGTCAGTA 1052 consensus_9518#2 ------------------------------------------------------------ consensus_9518#0 AGCGCGATCGACAACGACAGTTCGGCAGTCGTGCTGACCCTGAGGCTGCCGGATTTGGCG 1436 consensus_9518#1 CGCTCCCAATACACGTTTTTCGTGAAATGAGTAAAACAATAACAAAAGAGAGCAAAAAAC 1112 consensus_9518#2 ------------------------------------------------------------ consensus_9518#0 TGCGCCTCCGAGGTGGCGATGTACGCATTCAAACATTTGAGTTCGATCCTTATCAGCTGC 1496 consensus_9518#1 AATACAATACAAAAAAACTCCAAAAAGAGACGAAAATCATACGTAAA------------- 1159 consensus_9518#2 ------------------------------------------------------------ consensus_9518#0 AAGGACGAGAAGGACAAGAATCGATACGCTCAATACCTCTCCCATTGCCGACGCGTAAGG 1556 consensus_9518#1 ------------------------------------------------------------ consensus_9518#2 ------------------------------------------------------------ consensus_9518#0 AGTAAGTATGCTTCGAGTCACCGTTAGACTGTCAATCCTTTTTTGCCATTTCATCGTATT 1616 consensus_9518#1 ------------------------------------------------------------ consensus_9518#2 ------------------------------------------------------------ consensus_9518#0 TCCAATTAAGAATTGTGGTCTAATGTGCCAATTCCTTTGATTTTTTATGACGACTGTAAA 1676 consensus_9518#1 ------------------------------------------------------------ consensus_9518#2 ------------------------------------------------------------ consensus_9518#0 CACTTATTTCACCTCCAACACACTGTCGATTTTTCTTTATCACTATATTTTTAATAATCA 1736 consensus_9518#1 ------------------------------------------------------------ consensus_9518#2 ------------------------------------------------------------ consensus_9518#0 AATTCCCCTTGCCTGAGCTATGGGGGATGTGTCATGTGTCGTTATTCAGCCGTAGAATGG 1796 consensus_9518#1 ------------------------------------------------------------ consensus_9518#2 ------------------------------------------------------------ consensus_9518#0 AGATACACGGGTAGTGGTTTGCGGAAGAGGGCTATGCTCGAGACATGCCTGTGACACGAG 1856 consensus_9518#1 ------------------------------------------------------------ consensus_9518#2 ------------------------------------------------------------ consensus_9518#0 ACTAGGGTGGAGACATCTCTCTCTCTAGAGATTCGTACTATAACCGAGCTTATAGTGCAC 1916 consensus_9518#1 ------------------------------------------------------------ consensus_9518#2 ------------------------------------------------------------ consensus_9518#0 GTACCATGCAGTACAAAATGATGAAAAAATGATGTGAGGTTTCTCAGTTTGCAAATCGAA 1976 consensus_9518#1 ----------------- consensus_9518#2 ----------------- consensus_9518#0 AAAAGGCAAGAGCCATT 1993 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||