These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9530#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 2337 fasta sequence [TCCTTTATCTAAACTACTCTAATACAGTTATAATTTATTACTAATTACTGCTTGTCCTTCTATACATAACTTTCCGCATGGTGTATTGCGTGTACGTGTAGTTGTTTAACAAATGTGATAACAAGCGAAGGCAAAACAACATTGCAAAATAGTTAGAAGACAAAGAAAAGTACGGGGAAAAAGTAGAGAAGAGAAAAGAGCCGCACCAAGAAGGTATATTCGATTTTACTACTTTATTCAAGAGAGACCCACATCTATCCCCGTCCCTTCGATTCCGTTTCCTAACATGTTCACATCTGCACTCTGCATTTCTTTGATAAGCAATCCTAATGTTTTCTTTTTGTTTTCCGAAACATATTCCAAGCCTTTGTGTGTTTTTGGAATTTCCGCGTGTTTTCATTAAAGTCTTTCCTAACTACCCTGCCTATACAAACCCCGCTCCCTTGAAACAGTTAACCGGAACAATGTTGATCCGAA-CCATGTTCCGTGTTTTGTTCATCCTGCTAGACG-AAAAGGACCCCACCCGCACACACCACACCACCCCAATGTGGGCCACATTTTGCACCACACCTCATCCTGCTCCTGCTCCTCCTCCGACCCACATCGTCGTGCAAATCTGGGCTTCCTTTTCGAAATTCATATAAATATGGTATTTCATTGCTACTAAGCTACTACTGCTACAGCTACACAGCATCGCATCCCCGCCTTGTTTCATTTCTTTTAGGATTCTTTCCTTACTTTAAAAACAAAATTGCAACGAAAAGTCAAACCGTCCCTTAATGTATAACAAACTATTCGATCTTGGCATCTAGTGCAGC-GGCACACCAACGCGAAATGGTTGAACAAGAACGCGACTTAAAACGAATGTACATTGAAGGAACATACACTGAAGAAACCGTACACGAGAGTCGCTCAATTGT-AATGTTTATAATCGCGCTTTTTTTCTTCTTCTTCTTTTTTCTCACACTACGCACGCACACCTCACACATATCGAGGTGAACGAACGTGCAACCG-TCGTGCGCTGTGTGCTCTACCGTACTAAAAAATACAAAACGATAAACTATAGCTAACCAAGAAGTACAGGAAGAAACCGATGACGAGTAGAAAAATGTATATGCATAATGAAACGAAAAAAACGATCAAACAAACAAACAAAAAACAATATTACTCCACTCGAAGGTACCAGAAATACGACTAGCCACGTGGTGGGTGCCGCACTAGCATTAGCATTAC-TTAAGAAGATGAAACAAAACTTCATCTTGTCGGCTTTATCTCTCTCTTACTCTCTTTCTCTCTCTCTCTCTCTCACTTTCCCTCTTCGGATCTCCGC-GGGTGCATTTTCCCCATTTTTTTTTTCCTCTCGAATGCAATTCCTTTCCATCGGTAGTGTGTGAAATGTTGCTTTGCTCCTTGTGTTCCTCCGCCCCTGCTTGCTTGAACGTCCAGCGCCACAGCTTGGTAGTAGTAGTAGTGTTGCTTTACACTTAGTACCCAATGGTACAATCCATCCACATGGTTCCGAGGATGGATATGATGGGTGTGGGGAGGATTGGGAGGTGATGTCCTTTTCAAACAGTTCGCAAAGTAATTCCAGTGCCATGCCTCTGAGCGAAAGGAGCACGAGAAGAGCGCGAACGCGCTGACGGAGAGCCAGGACCGGAGGGGGTAGGTGTTGGTAAGAGAGCGAACGAAGAGATCGAAGCGATTTTGGCGCCCATCGTCCGCGATAGCTCACGCACCGGCTACGGGTGCGACGACGATCACGGATCTTATATGCGTAATGCTA--C--TTTTAGAGCTTGCTGTCTTTGCGTTCGTTCTATGTGAATAATTTCTACAGCCTTACGTACAAATCGCGCTTCTTCTTTCTCTTGGTATGTTGTGTGTATGGTTTGTATGTCTGCATGCGCGCGTTGTGGGTTGTTGTGTTGTTTTGTGGAAGTAGTTTGACTGTTGGTGCTAATATAGCCGGTACCACCAACAACGCAATCTACGACGCGTACATCTTGCTAATTTCGGCCTGATACCGTTCCTGGATGTCTTTGCGCTTCAGCTTGAAGGCGGCCGTCACCAGACCCATATCGGGCGTCCAGATGTCCTTGCACAGGTGTACGGCGGCGGGAATTTCGCTACGGTGCAGTTTGCATTTACGGCCATGGTCAGCCAGTTCCTGCAGTACGGCCTTTTCCAACTTCTTGTTGTCGCACAGGTCCTCAAACTCGACCCCGCGAATGTCCAGCCGCTCTGCGATCTCCTCCAGATGTTTGGGATTCGGCACAACCAGCGCCACGGTGTACTGCTTCGTGGAGTCACCATACACGCAGATGTTTTTCACCACGG] [-] EMBL BM645498 [TCCTTTATCTAAACTACTCTAATACAGTTATAATTTATTACTAATTACTGCTTGTCCTTCTATACATAACTTTCCGCATGGTGTATTGCGTGTACGTGTAGTTGTTTAACAAATGTGATAACAAGCGAAGGCAAAACAACATTGCAAAATAGTTAGAAGACAAAGAAAAGTACGGGGAAAAAGTAGAGAAGAGAAAAGAGCCGCACCAAGAAGGTATATTCGATTTTACTACTTTATTCA AGAGACCCACATCTATCCCCGTCCCTTCGATTCCGTTTCCTAACATGTTCACATCTGCACTCTGCATTTCTTTGATAAGCAATCCTAATGTTTTCTTTTTGTTTTCCGAAACATATTCCAAGCCTTTGTGTGTTTTTGGAATTTCCGCGTGTTTTCATTAAAGTCTTTCCTAACTACCCTGCCTATACAAACCCCACTCCCTTGAAACAGTTAACCGGAGCAATGTTGATCCGAA CCgg ] [-] EMBL BM587621 [ TACATCATTTTTCGCATGGTGTATTGCGAGTACGTGTGGTTGTTTAACAAATGTGATAACAAGCGAAGGCAAAACACCATTGCAAAATAGTTAGAAGACAAAGAAAAGTACGGGGAAAAAGTAGAGAAGAGAAAAGAACCGCACCAAGAAGGTATATTCGATTTTACTACTTTATTCAAGAGAGACCCACATCTATCCCCGTCCCTTCGATTCCGTTTCCTAACATGTTCACATCTGCACTCTGCATTTCTTTGATAAGCCATCCTAATGTTTTCTTTTTGTTTTCCGAAACATATTCCAAGCCCTTGTGTGTTTTTGGAATTTCCGCGTGTTTTCATTAAAGTCTTTCCTAACTACCCTGCCTATACAAACCCCGCTCCCTTGAAACAGTTAACCGGAACAATGTTGATCCGAA CCATGTTCCGTGTTTTGTTCATCCTGCTAGACG AAAAGGACCCCACCCG CACACCATACCACCCCAATGTGGGCCACATTTc ] [-] EMBL CNS08FYG [ CGCACCAAGAAGGTATATTCGATTTTACTACTTTATTCAAGAGAGACCCACATCTATCCCCGTCCCTTCGATTCCGTTTCCTAACATGTTCACATCTGC ] [+] EMBL CNS08Z3N [ aAATATCCCCGTGTTTTCATTAAAGTCTTTCCTAACTACCCTGCCTATACAAACCCCGCTCCCTTGAAACAGTTAACCGGAACAATGTTGATCCGAA CCATGTTCCGTGTTTTGTTCATCCTGCTAGACG AAAAGGACCCCACCCGCACACACCACACCACCCCAATGTGGGCCACATTTTGCACCACACCTCATCCTGCTCCTGCTCCTCCTCCGACCCACATCGTCGTGCAAATCTGGGCTTCCTTTTCGAAATTCATATAAATATGGTATTTCATTGCTACTAAGCTACTACTGCTACAGCTACACAGCATCGCATCCCCGCCTTGTTTCATTTCTTTTAGGATTCTTTCCTTACTTTAAAAACAAAATTGCAACGAAAAGTCAAACCGTCCCTTAATGTATAACAAACTATTCGATCTTGGCATCTAGTGCAGCGGGCACACCAACGCGAAATGGTTGAACAAGAACGCGACTTAAAACGAATGTACATTGAAGGAACATACACTGAAGAAACCGTACACGAGAGTTGCTCAATTGT AATGTTTATAATCGCGCTTTTTTTCTTCTTCTTCTTTTTTCTCACACTACGCACGCACACCTCACACATATCGAGGTGAACGAACGTGCAACCGCTCGTGCGCTGTGTGCTCTACCGTACTAAAAAATACAAAACGATAAACTATAGCTAACCAAGAAGTACAGGAAGAAACCGATGACGAGTAGAAAAATGTATATGCATAATGAAACGAAAAAAACGATCAAACAAACAAACAAAAAACAATATTACTCCACTCGAAGGTACCAGAAATACGACTAGCCACGTGGTGGGTGCCGCACTAGCATTAGCATTAC TTAAGAAGATGAAACAAAACTTCATCTTGTCGGCTTTATCTCTCTCTTACTCTCTTTCTCTCTCTCTCTCTCTCACTTTCCCTCTTCGGATCTCCGC GGGTGCAT ] [-] EMBL BX620623 [ TCCTAACTACCCTGCCTATACAAACCCCGCTCCCTTGAAACAGTTANCCGGAACAATGTTGATCCGAA CCATGTTCCGTGTTTTGTTCATCCTGCTAGACG AAAAGGACCCCACCCGCACACACCACACCACCCCAATGTGGGCCACATTTTGCACCACACCTCATCCTGCTCCTGCTCCTCCTCCGACCCACATCGTCGTGCAAATCTGGGCTTCCTTTTCGAAATTCATATAAATATGGTATTTCATTGCTACTAAGCTACTACTGCTACAGCTACACAGCATCGCATCCCCGCCTTGTTTCATTTCTTTTAGGATTCTTTCCTTACTTTAAAAACAAAATTGCAACGAAAAGTCAAACCGTCCCTTAATGTATAACAAACTATTCGATCTTGGCATCTAGTGCAGC GGCACACCAACGCGAAATGGTTGAACAAGAACGCGACTTAAAACGAATGTACATTGAAGGAACATACACTGAAGAAACCGTACACGAGAGTCGCTCAATTGT AATGTTTATAATCGCGCTTTTTTTCTTCTTCTTCTTTTTTCTCACACTACGCACGCACACCTCACACATATCGAGGTGAACGAACGTGCAACCG TCGTGCGCT ] [-] EMBL BX620514 [ AACCGGAACAANGTTGATCCGAACCCATGTTCNGTGTTTTGTTCATCCTGCTAGACGAAAAAGGACCCCACCNGCACACACCACACCACCCCAATGTGGGCCACATTTTGCACCACACCTCATCCTGCTCCTGCTCCTCCTCCGACCCACATCGTCGTGCAAATCTGGGCTTCCTTTTCGAAATTCATATAAATATGGTATTTCATTGCTACTAAGCTACTACTGCTACAGCTACACAGCATCGCATCCCCGCCTTGTTTCATTTCTTTTAGGATTCTTTCCTTACTTTAAAAACAAAATTGCAACGAAAAGTCAAACCGTCCCTTAATGTATAACAAACTATTCGATCTTGGCATCTAGTGCAGC GGCACACCAACGCGAAATGGTTGAACAAGAACGCGACTTAAAACGAATGTACATTGAAGGAACATACACTGAAGAAACCGTACACGAGAGTCGCTCAATTGT AATGTTTATAATCGCGCTTTTTTTCTTCTTCTTCTTTTTTCTCACACTACGCACGCACACCTCACACATATCGAGGTGAACGAACGTGCAACCG TCGTGCGCTGTGTGCTCTACCGTACTAAAAAATACAAAACGATAAACTA ] [+] EMBL CNS08FYH [ AACAATGTTGATCCGAA CCATGTTCCGTGTTTTGTTCATCCTGCTAGACG AAAAGGACCCCACCCGCACACACCACACCACCCCAATGTGGGCCACATTTTGCACCACACCTCATCCTGCTCCTGCTCCTCCTCCGACCCACATCGTCGTGCAAATCTGGGCTTCCTTTTCGAAATTCATATAAATATGGTATTTCATTGCTACTAAG ] [-] EMBL CNS08Z3M [ TGGTTATTCATTGCTATTAAGCTACTACTGCTACAGCTATACAGCATCGCATCCCCGCCTTGTTTCATTTCTTTTAGGATTCTTTCCTTACTTTAAAAACAAAATTGCAACGAAAAGTCAAACCGTCCCTTAATGTATAACAAACTATTCGATCTTGGCATCTAGTGCAGC GGCACACCAACGCGAAATGGTTGAACAAGAACGCGACTTAAAACGAATGTACATTGAAGGAACATACACTGAAGAAACCGTACACGAGAGTCGCTCAATTGTAAATGTTTATAATCGCGCTTTTTTTCTTCTTCTTCTTTTTTCTCACACTACGCACGCACACCTCACACATATCGAGGTGAACGAACGTGCAACCG TCGTGCGCTGTGTGCTCTACCGTACTAAAAAATACAAAACGATAAACTATAGCTAACCAAGAAGTACAGGAAGAAACCGATGACGAGTAGAAAAATGTATATGCATAATGAAACGAAAAAAACGATCAAACAAACAAACAAAAAACAATATTACTCCACTCGAAGGTACCAGAAATACGACTAGCCACGTGGTGGGTGCCGCACTAGCATTAGCATTAC TTAAGAAGATGAAACAAAACTTCATCTTGTCGGCTTTATCTCTCTCTTACTCTCTTTCTCTCTCTCTCTCTCTCACTTTCCCTCTTCGGATCTCCGC GGGTGCATTTTCCCCATTTTTTTTTTCCTCTCGAATGCAATTCCTTTCCATCGGTAGTGTGTGAAATGTTGCTTTGCTCCTTGTGTTCCTCCGCCCCTGCTTGCTTGAACGTCCAGCGCCACAGCTTGGTAGTA ] [-] EMBL BM593162 [ AATGTTTATAATCGCGCTTTTT TTCTTCTTCTTTTTTCTCACACTACGCACGCACACCTCACACATATCGAGGTGAACGAACGCGCAACCG TCGTGCGCTGTGTGCTCTACCGTACTAAAAAATACAAAACGATAAACTATAGCTAACCAAGAAGTACAGGAAGAAACCGATGACGAGTAGAAAAATGTATATGCATAATGAAACGAAAAAAACGATCAAACAAACAAACAAAAAACAATATTACTCCACTCGAAGGTACCAGAAATACGACTAGCCACGTGGTGGGTGCCGCACTAGCATTAGCATTAC TTAAGAAGATGAAACAAAACTTCATCTTGTCGGCTTTATCTCTCTCTTACTCTCTT TCTCTCTCTCTCTCTCACTTTCCCTCTTCACATCTCCGC GGGTGCATTTTCCCCA TTTTTTTTCCTCTCGAATGCAATTCCTTTCCATCGGTAGTGTGTGAAATGTTGCTTTGCTCCTTGTGTTCCTCCGCCCCTGCTTGCTTGAACGTCCAGCGCCACAGCTTGGTAGTAGTAGTAGTGTTGCTTTACACTTAGTACCCcgg ] [-] EMBL BX623776 [ TCGCGC TTTTTTCTTCTTCTTCTTTTTTCTCACACTACGCACGCACNCNTCACACATATCGAGGTGAACGAACGTGCANCCG TCGTGCGCTGTGTGCTCTACCGTACTAAAAAATACAAAACGATAAACTATAGCTAACCAAGAAGTACAGGAAGAAACCGATGACGAGTAGAAAAATGTATATGCATAATGAAACGAAAAAAACGATCAAACAAACAAACAAAAAACAATATTACTCCACTCGAAGGTACCAGAAATACGACTAGCCACGTGGTGGGTGCCGCACTAGCATTAGCATTAC TTAAGAAGATGAAACAAAACTTCATCTTGTCGGCTTTATCTCTCTCTTACTCTCTTTCTCTCTCTCTCTCTCTCACTTTCCCTCTTCGGATCTCCGC GGGTGCATTTTCCCCATTTTTTTTTTCCTCTCGAATGCAATTCCTTTCCATCGGTAGTGTGTGAAATGTTGCTTTGCTCCTTGTGTTCCTCCGCCCCTGCTTGCTTGAACGTCCAGCGCCACAGCTTGGTAGTAGTAGTAGTGTTGCTTTACACTTAGTACCCAATGGTACAATCCATCCACATGGTTCCGAGGATGGATATGATGGGTGTGGGGAGGATTGGGAGGTGATGTCCTTTTCAAACAGTTCGCAAAGTAATTCCAGTGCCATGCCTCTGAGCGAAAGGAGCACGAGAAGAGCGCGAACGCGCTGACGGAGAGCCAGGACCGGAGGGGGTAGGTGTTGGTAAGAGAGCGAACGAAGAGATCGAAGCGATTTTGGCGCCCATCGTCCGCGATAGCTCAC ] [+] EMBL CNS08EFX [ TAATGAAACGAAAAAAACGATCAAACAAGCAAACAAAAAACAATATTACTCCACTCGAAGGTACCAGAAATACGACTAGCCACGTGGTGGGTGCCGCACTAGCATTAGCATTAC TTAAGAAGATGAAACAAAACTTCATCTTGTCGGCTTTATCTCTCTCTTACTCTCTTTCTCTCTCTCTCTCTCTCACTTTCCCTCTTCGGATCTCCGC GGGTGCATTTTCCCCATTTTTTTTTTCCTCTCGAATGCAATTCCTTTCCATCGGTAGTGTGTGAAATGTTGCTTTGCTCCTTGTGTTCCTCCGCCCCTGCTTGCTTGAACGTCCAGCGCCACAGCTTGGTAGTAGTAGTAGTGTTGCTTTACACTTAGTACCCAATGGTACAATCCATCCACATGGTTCCGAGGATGGATATGATGGGTGTAGGGAGGATTGGGAGGTGATGTCCTTTTCAAACAGTTCGCAAAGTAATTCCAGTGCCATGCCTCTGAGCGAAAGGAGCACGAGAAGAGCGCGAACGC CTGACGGAGAGCCAGGACCGGA GGGGTAGGTGTTGGTAAGAGAGCGAACGAAGAGATCGAAGCGATTTTGGCGCCCATCGTCCGCGATAGCTCACGCACCGGCTACGGGTGCGACGACGATCACGGATCTTATATGCGTAATGCTA C TTTTAGAGCTTTTTGTCTTTGCGTTCGTTCTATGTGAATAATTTCTACAGCCTTACGTTTTAATCGCGCTTCTTCTTTCTCTTGGTATGTTGTGTGTATGGTTTGTATGTCTGCATGCGCGCGTTGTGGGTTGTTGTGTTGTTTTGTGGAAGTAGTTTGACTGTTGGTGCTAATATAGCCGGTACCACCAACAACGCAATCTACGACGCGTACATCTTGCTAATTTCGGCCTGATACCGTTCCTGGATGTCTTTGCGCTTCAGCTTGAAGGCGGCCGTCACCAGACCCATATCGGGCG ] [-] EMBL BM643277 [ TAGCATTACTTTAAGAAGATGAAACATAACTTCATCTTGTCGGCTTTATCTCTCTATTACTCTCTTTCTCTC C CTCTCACACTTTCCCTCTTCGCATCTCCGC GGGTGCATTTTCCCCA TTTTTTTTTCCTCTCAAATGCAATTCCTTTCCATCGGTAGTGTGTGAAATGTTGCTTTGCTCCTTGTGTTCCTCCGCCCCTGCTTGCTTGAACGTCCAGCGCCACAGCTTGGTAGTAGTAGTAGTGTTGCTTTACACTTAGTACCCAATGGTACAATCCATCCACATGGTTCCGAGGATGGATATAATGGGTGTGGGGAGGATTGGGAGGTGATGTCCTTTTCAAACAGTTCGCAAAGTAATTCCAGTGCCATGCCTCTGAGCGAAAGGAGCACGAGAAGAGCGCGAACGCGCTGACGGAGAGCCAGGACCGGAGGGGGTAGGTGTTGGTAAGAGAGCGAACGAAGAGATCGAAGCGATTTTGGCGCCCATCGTCCGCGATAGCTCACGCACCGGTGACGGGTGCGACGACGATCACGGATCT TATGCGTAATGCTAATT TTTTAGAGCTTGCTGTCTTTGCGTTCGTTCTATGTGAAcgg ] [-] EMBL BM581279 [ CCCTCTTCACATCTCCGCGGGGTGCATTTTCCCCA TTTTTTTTCCTCTCGAATGCAATTCCTTTCCATCGGTAGTGTGTGAAATGTTGCTTTGCTCCTTGTGTTCCTCCGCCCCTGCTTGCTTGAACGTCCAGCGCCACAGCTTGGTAGTAGTAGTAGTGTTGCTTTACACTTAGTACCCAATGGTACAATCCATCCACATGGTTCCGAGGATGGATATGATGGGTGTGGGGAGGATTGGGAGGTGATGTCCTTTTCAAACAGTTCGCAAAGTAATTCCAGTGCCATGCCTCTGAGCGAAAGGAGCACGAGAAGAGCGCGAACGCGCTGACGGAGAGCCAGGACCGGAGGGGGTAGGTGTTGGTAAGAGAGCGAACGAAGAGATCGAAGCGATTTTGGCGCCCATCGTCCGCGATAGCTCACGCACCGGCGACGGGTGCGACAACGATCACGGATCT TATGCGTAATGCTA CTTTTTTAGAGCTTGCTGTCTTTGCGTTCGTTCTATGTGAATAATTTCTACAGCCTTACGTACAAATCGCGCTTCTTCTTTCTCTTGGTATGTTGTGTGTATGGTTTGTATGTCTGCATGCGCGC GTTGTTGTGTTGTTTTGTGGAAGTAGTTTGACTGTTGGTGCTAATATAGCCGGTACCACCAACAACGCAACCCACGcgtccgcgg ] [-] EMBL BX628858 [ CCCCATTTTTTTTTTCCTCTCGAATGCAATTCCTTTCCATCGGTAGTGTGTGAAATGTTGCTTTGCTCCTTGTGTTCCTCCGCCCCTGCTTGCTTGAACGTCCAGCGCCACAGCTTGGTAGTAGTAGTAGTGTTGCTTTACACTTAGTACCCAATGGTACAATCCATCCACATGGTTCCGAGGATGGATATGATGGGTGTGGGGAGGATTGGGAGGTGATGTCCTTTTCAAACAGTTCGCAAAGTAATTCCAGTGCCATGCCTCTGAGCGAAAGGAGCACGAGAAGAGCGCGAACGCGCTGACGGAGAGCCAGGACCGGAGGGGGTAGGTGTTGGTAAGAGAGCGAACGAAGAGATCGAAGCGATTTTGGCGCCCATCGTCCGCGATAGCTCACGCACCGGCTACGGGTGCGACGACGATCACGGATCTTATATGCGTAATGCTA C TTTTAGAGCTTGCTGTCTTTGCGTTCGTTCTATGTGAATAATTTCTACANCCTTACGTACAAATCGCGCTTCTTCTTTCTCTTGGTATGTTGTGTGTATGGTTTGTATGTCTGCATGCGCGCGTTGTGGGTTGTTGTGTTGTTTTGTGGAAGTAGTTTGACTGTTGGTGCTAATATAGCCGGTACCACCAACAACGCAATCTACGACGCGTACATCT ] [+] EMBL AGA285391 [ AACAACGCAATCTACGACGCGTACATCTTGCTAATTTCGGCCTGATACCGTTCCTGGATGTCTTTGCGCTTCAGCTTGAAGGCGGCCGTCACCAGACCCATATCGGGCGTCCAGATGTCCTTGCACAGGTGTACGGCGGCGGGAATTTCGCTACGGTGCAGTTTGCATTTACGGCCATGGTCAGCCAGTTCCTGCAGTACGGCCTTTTCCAACTTCTTGTTGTCGCACAGGTCCTCAAACTCGACCCCGCGAATGTCCAGCCGCTCTGCGATCTCCTCCAGATGTTTGGGATTCGGCACAACCAGCGCCACGGTGTACTGCTTCGTGGAGTCACCATACACGCAGATGTTTTTCACCACGG] consensusID : consensus_9530#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 470 fasta sequence [GTGGGTTTTGCNCGGAGGNGATTTGGGGAGTGTATGGAGTGTGTGTTGGTGGGGGTGAGGACTTGGGTGATGGTGTGAGTGTGCCGGTTGTCAGACAGTTCGCAAAGTAATTCCAGTGCCATGCCTCTGAGCGAAAGGAGCACGAGAAGAGCGCGAACGCGCTGACGGAGAGCCAGGACCGGAGGGGGTAGGTGTTGGTAAGAGAGCGAACGAAGAGATCGAAGCGATTTTGGCGCCCATCGTCCGCGATAGCTCACGCACCGGCTACGGGTGCGACGACGATCACGGATCTTATATGCGTAATGCTACTTTTAGAGCTTGCTGTCTTTGCGTTCGTTCTATGTGAATAATTTCTACAGCCTTACGTACAAATCGCGCTTCTTCTTTCTCTTGGTATGTTGTGTGTATGGTTTGTATGTCTGCATGCGCGCGTTGTGGCTTGTTGTGTTGTTTTGTGGANAACCTCGGCG] [-] EMBL AL934762 [GTGGGTTTTGCNCGGAGGNGATTTGGGGAGTGTATGGAGTGTGTGTTGGTGGGGGTGAGGACTTGGGTGATGGTGTGAGTGTGCCGGTTGTCAGACAGTTCGCAAAGTAATTCCAGTGCCATGCCTCTGAGCGAAAGGAGCACGAGAAGAGCGCGAACGCGCTGACGGAGAGCCAGGACCGGAGGGGGTAGGTGTTGGTAAGAGAGCGAACGAAGAGATCGAAGCGATTTTGGCGCCCATCGTCCGCGATAGCTCACGCACCGGCTACGGGTGCGACGACGATCACGGATCTTATATGCGTAATGCTACTTTTAGAGCTTGCTGTCTTTGCGTTCGTTCTATGTGAATAATTTCTACAGCCTTACGTACAAATCGCGCTTCTTCTTTCTCTTGGTATGTTGTGTGTATGGTTTGTATGTCTGCATGCGCGCGTTGTGGCTTGTTGTGTTGTTTTGTGGANAACCTCGGCG] consensusID : consensus_9530#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 290 fasta sequence [CGTCGTGCAAATCTGGGCTTCCTTTTCGAAATTCATATAAATATGGTATTTCATTGCTACTATGCTACTACTCCCTACTACTGCTACAGCTACACAGCATCGCATCCCCGCCTTGTTTCATTTCTTTTGGATTCTTTCCTTACTTTAAAAACAAAATTGCAACGAAAAGTCAAACCGTCCCTTAATGTATAACAAACTATTCGAACTTGGCATCTAGTGCAGCGGCACACCAACGCAAAATGGTAGAACAAGAACGCGACTTAAAACGAATGTACATTGAAGGAACACGG] [-] EMBL BM579671 [CGTCGTGCAAATCTGGGCTTCCTTTTCGAAATTCATATAAATATGGTATTTCATTGCTACTATGCTACTACTCCCTACTACTGCTACAGCTACACAGCATCGCATCCCCGCCTTGTTTCATTTCTTTTGGATTCTTTCCTTACTTTAAAAACAAAATTGCAACGAAAAGTCAAACCGTCCCTTAATGTATAACAAACTATTCGAACTTGGCATCTAGTGCAGCGGCACACCAACGCAAAATGGTAGAACAAGAACGCGACTTAAAACGAATGTACATTGAAGGAACACGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9530#0 TCCTTTATCTAAACTACTCTAATACAGTTATAATTTATTACTAATTACTGCTTGTCCTTC 60 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 TATACATAACTTTCCGCATGGTGTATTGCGTGTACGTGTAGTTGTTTAACAAATGTGATA 120 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 ACAAGCGAAGGCAAAACAACATTGCAAAATAGTTAGAAGACAAAGAAAAGTACGGGGAAA 180 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 AAGTAGAGAAGAGAAAAGAGCCGCACCAAGAAGGTATATTCGATTTTACTACTTTATTCA 240 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 AGAGAGACCCACATCTATCCCCGTCCCTTCGATTCCGTTTCCTAACATGTTCACATCTGC 300 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 ACTCTGCATTTCTTTGATAAGCAATCCTAATGTTTTCTTTTTGTTTTCCGAAACATATTC 360 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 CAAGCCTTTGTGTGTTTTTGGAATTTCCGCGTGTTTTCATTAAAGTCTTTCCTAACTACC 420 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 CTGCCTATACAAACCCCGCTCCCTTGAAACAGTTAACCGGAACAATGTTGATCCGAACCA 480 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 TGTTCCGTGTTTTGTTCATCCTGCTAGACGAAAAGGACCCCACCCGCACACACCACACCA 540 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 CCCCAATGTGGGCCACATTTTGCACCACACCTCATCCTGCTCCTGCTCCTCCTCCGACCC 600 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------GTGGGT 6 consensus_9530#0 ACATCGTCGTGCAAATCTGGGCTTCCTTTTCGAAATTCAT--ATAAATATG-GTATTTCA 657 consensus_9530#2 ----CGTCGTGCAAATCTGGGCTTCCTTTTCGAAATTCAT--ATAAATATG-GTATTTCA 53 consensus_9530#1 TTTGCNCGGAGGNGATTTGGGGAGTGTATGGAGTGTGTGTTGGTGGGGGTGAGGACTTGG 66 * * * ** **** * * * * * ** * * ** consensus_9530#0 TTGCTACTAAGCTACTACT----------GCTACAGCTACACAGCATCGCATCCCCGCCT 707 consensus_9530#2 TTGCTACTATGCTACTACTCCCTACTACTGCTACAGCTACACAGCATCGCATCCCCGCCT 113 consensus_9530#1 GTGATGGTGTGAGTGTGCCGGTTGTCAGACAGTTCGCAAAGTAATTCCAGTGCCATGCCT 126 ** * * * * * ** * * * ** **** consensus_9530#0 T---GTTTCATTTCTTTTAGGATTCTTTCCTTACTTTAAAAACAAAATTGCAACGAAAAG 764 consensus_9530#2 T---GTTTCATTTCTTTT-GGATTCTTTCCTTACTTTAAAAACAAAATTGCAACGAAAAG 169 consensus_9530#1 CTGAGCGAAAGGAGCACGAGAAGAGCGCGAACGCGCTGACGGAGAGCCAGGACCGGAGGG 186 * * * * * * * * * * ** * * consensus_9530#0 TCAAACCGTCCCTTAATGTAT-AACAAACTATTCGAT-----CTTGGCATCTAGTG-CAG 817 consensus_9530#2 TCAAACCGTCCCTTAATGTAT-AACAAACTATTCGAA-----CTTGGCATCTAGTG-CAG 222 consensus_9530#1 GGTAGGTGTTGGTAAGAGAGCGAACGAAGAGATCGAAGCGATTTTGGCGCCCATCGTCCG 246 * ** * * * *** ** **** ***** * * * * * consensus_9530#0 CGGCA-------CACCAACGCGAAATGGTTGAACAAGAACGCGACTTAAA-ACG-AATG- 867 consensus_9530#2 CGGCA-------CACCAACGCAAAATGGTAGAACAAGAACGCGACTTAAA-ACG-AATG- 272 consensus_9530#1 CGATAGCTCACGCACCGGCTACGGGTGCGACGACGATCACGGATCTTATATGCGTAATGC 306 ** * **** * ** ** * *** **** * ** **** consensus_9530#0 TACATTGAAGGAACATACACTGAAGAAACCGTACACGAGAGTCGCTCAATTGTAATGTTT 927 consensus_9530#2 TACATTGAAGGAACACGG------------------------------------------ 290 consensus_9530#1 TACTTTTAGAGCTTGCTGTCTTTGCGTTCGTTCTATGTGAATAATTTCTACAGCCTTACG 366 *** ** * * consensus_9530#0 ATAATCGCGCTTTTTTTCTTCTTCTTCTTTTTTCTCACACTACGCACGCACACCTCACAC 987 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 TACAAATCGCGCTTCTTCTTTCTCTTGGTATGTTGTGTGTATGGTTTGTATGTCTGCATG 426 consensus_9530#0 ATATCGAGGTGAACGAACGTGCAACCGTCGTGCGCTGTGTGCTCTACCGTACTAAAAAAT 1047 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 CGCGCGTTGTGGCTTGTTGTGTTGTTTTGTGGANAACCTCGGCG---------------- 470 consensus_9530#0 ACAAAACGATAAACTATAGCTAACCAAGAAGTACAGGAAGAAACCGATGACGAGTAGAAA 1107 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 AATGTATATGCATAATGAAACGAAAAAAACGATCAAACAAACAAACAAAAAACAATATTA 1167 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 CTCCACTCGAAGGTACCAGAAATACGACTAGCCACGTGGTGGGTGCCGCACTAGCATTAG 1227 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 CATTACTTAAGAAGATGAAACAAAACTTCATCTTGTCGGCTTTATCTCTCTCTTACTCTC 1287 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 TTTCTCTCTCTCTCTCTCTCACTTTCCCTCTTCGGATCTCCGCGGGTGCATTTTCCCCAT 1347 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 TTTTTTTTTCCTCTCGAATGCAATTCCTTTCCATCGGTAGTGTGTGAAATGTTGCTTTGC 1407 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 TCCTTGTGTTCCTCCGCCCCTGCTTGCTTGAACGTCCAGCGCCACAGCTTGGTAGTAGTA 1467 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 GTAGTGTTGCTTTACACTTAGTACCCAATGGTACAATCCATCCACATGGTTCCGAGGATG 1527 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 GATATGATGGGTGTGGGGAGGATTGGGAGGTGATGTCCTTTTCAAACAGTTCGCAAAGTA 1587 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 ATTCCAGTGCCATGCCTCTGAGCGAAAGGAGCACGAGAAGAGCGCGAACGCGCTGACGGA 1647 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 GAGCCAGGACCGGAGGGGGTAGGTGTTGGTAAGAGAGCGAACGAAGAGATCGAAGCGATT 1707 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 TTGGCGCCCATCGTCCGCGATAGCTCACGCACCGGCTACGGGTGCGACGACGATCACGGA 1767 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 TCTTATATGCGTAATGCTACTTTTAGAGCTTGCTGTCTTTGCGTTCGTTCTATGTGAATA 1827 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 ATTTCTACAGCCTTACGTACAAATCGCGCTTCTTCTTTCTCTTGGTATGTTGTGTGTATG 1887 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 GTTTGTATGTCTGCATGCGCGCGTTGTGGGTTGTTGTGTTGTTTTGTGGAAGTAGTTTGA 1947 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 CTGTTGGTGCTAATATAGCCGGTACCACCAACAACGCAATCTACGACGCGTACATCTTGC 2007 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 TAATTTCGGCCTGATACCGTTCCTGGATGTCTTTGCGCTTCAGCTTGAAGGCGGCCGTCA 2067 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 CCAGACCCATATCGGGCGTCCAGATGTCCTTGCACAGGTGTACGGCGGCGGGAATTTCGC 2127 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 TACGGTGCAGTTTGCATTTACGGCCATGGTCAGCCAGTTCCTGCAGTACGGCCTTTTCCA 2187 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 ACTTCTTGTTGTCGCACAGGTCCTCAAACTCGACCCCGCGAATGTCCAGCCGCTCTGCGA 2247 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 TCTCCTCCAGATGTTTGGGATTCGGCACAACCAGCGCCACGGTGTACTGCTTCGTGGAGT 2307 consensus_9530#2 ------------------------------------------------------------ consensus_9530#1 ------------------------------------------------------------ consensus_9530#0 CACCATACACGCAGATGTTTTTCACCACGG 2337 consensus_9530#2 ------------------------------ consensus_9530#1 ------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||