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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9551#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 950 fasta sequence
[ACTGGAAACGA-ACGAGCTTCGTG-TGGAA-GAAACCCCGTTTTCAACCCAATTCTGAAGAGTATGTTGTGACGATTTTG-TGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCATGTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAG-AGATCTCACTGGAAGAGCAGTTAAGCAAATTATCGGTTAAGGATT----TAAAATCTCAGGTCACAAGAACTGGGAATAGGAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGACGGCAAAGAGCACATGCTGGCACGCGTGTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTACAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGTAGATTTCAAAACGATCCGTGAGCTAGTGAGACAGCTGATTCATGGCAAAATTCTGGTAGGACATGCATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCG-AAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAAGCATCGCGTATGTTTTTCTCCGCGAGGACATTCAAGACGGTTCACACTGCTCGGTGGAGGATGCACGGGCCGCCATGAAGATCTACATGCTGTTTGAGAAGGAGTGGGAAAAATCCGCACTGCCCGCGTGGATCGGAGCG-ATGGGTAGCGATTAACTGCTGAACGCCCCGC----AGTCGCAGCGGTTATTCTTCGACAGATTGCTTCGACTGTTATTGCATTATATTGTCATAGTTATACAATTTTAAGCCTGTTTTTACTACACAAAAAAAAAAAAAAAAGGCCAAATGTGCCCGAGC]
[+] EMBL CNS09PAJ [ACTGGAAACGA AAAAGCTTCGTG TGGAA GAAACCCCGTTTTCAACCCAATTCTGAAGAGTATGTTGTGACGATTTTG TGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCATGTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAG AGATCTCACTGGAAGAGCAGTTAAGCAAATTATCGGTTAAGGATT TAAAATCTCAGGTCACAAGAACTGGGAATAGGAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGACGGCAAAGAGCACATGCTGGCACGCGTGTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTACAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGTAGATTTCAAAACGATCCGTGAGCTAGTGAGACAGCTGATTCATGGCAAAATTCTGGTAGGACATGCATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCG AAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAAGCATCGCGTATGTTTTTCTCCGCGAGGACATTCAAGACGGTTCACACTGCTCGGTGGAGGATGCACGGGCCGCCATGAAGATCTACATGCTGTTTGAGAAGGAGTGGGAAAAATCCGCACTGCCCGCGTGGATCGGAGCG ATGGGTAGCGATTAACTGCTGAACGCCCCGC AGTCGCAGCGGTTATTCTTCGACAGATTGCTTCGACTGTTATTGC ]
[+] EMBL BM638862 [ ccGAAACGA ACGAGCTTCGTG TGGAACGAAACCCCGTTTTCAACCCAATTCTGAAGAGTATGTTGTGACGATTTTG TGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCATGTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAG AGATCTCACTGGAAGAGCAGTTAAGCAAATTATCGGTTAAGGATT TAAAATCTCAGGTCACAAGAACTGGGAATAGGAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGACGGCAAAGAGCACATGCTGGCACGCGTGTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTATAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGTAGATTTCAAAACGATCCGTGAGCTAGTGAGACAGCTGATTCATGGCAAAATTTTGGTAGGACATGCATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCGAAAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAAGCAT ]
[+] EMBL CNS095A0 [ AAACGA ACGAGCTTCGTG TGGAACGAAACCCCGTTTTCAACCCAATTCTGAAGAGTATGTTGTGACGATTTTGCTGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCATGTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAG AGATCTCACTGGAAGAGCAGTTAAGCAAATTATCGGTTAAGGATT TAAAATCTCAGGTCACAAGAACTGGGAATAGGAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGGCGGCAAAGAGCACATGCTGGCACGCGTGTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTACAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGTAGATTTCAAAACGATCCGTGAACTGGTGAGACAGCTGATTCATGGCAAAATTCTGGTAGGACATGCATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCG AAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAAGCATCGCGTATGTTTTTCTCCGCGAGGACATCCAAGACGGTTCACACTGCTCGGTGGAGGATGCACGGGCCGCCATGAAGATCTACATGCTGTTTGAGAAGGAGTGGGAAAAATCCGCACTGCCCGCGTGGATCGGAGCG ATGGGTAGCGATTAACGGTTGAACGCCCCGCAGCGAGTCGCAGCGGTTATTCTTCGACAGATTGC ]
[+] EMBL CNS093UE [ aAAAC A ACGAGCTTCGTG TGGAC GAAA CCCGTTTTCAACCCAATTCTGAAGAGTATGTTGTGACGATTTTG TGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCATGTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAG AGATCTCACTGGAAGAGCAGTTAAGCAAATTATCGGTTAAGGATTGTAGTAAAATCTCAGGTCACAAGAACTGGGAATAGGAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGACGGCAAAGAGCACATGCTGGCACGCGTGTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTACAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGTAGATTTCAAAACGATCCGTGAGCTAGTGAGACAGCTGATTCATGGCAAAATTCTGGTAGGACATGCATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACC ]
[+] EMBL CNS094Y2 [ AACGACAC CGCTTCGTG TGGAC GAAACCCCGTTTTCAACCCAATTCTGAAGAGTATGTTGTGACGATTTTG TGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCATGTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAG AGATCTCACTGGAAGAGCAGTTAAGCAAATTATCGGTTAAGGATT TAAAATCTCAGGTCACAAGAACTGGGAATAGGAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGACGGCAAAGAGCACATGCTGGCACGCGTGTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTACAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGTAGATTTCAAAACGATCCGTGAGCTAGTGAGACAGCTGATTCATGGCAAAATTCTGGTAGGACATGCATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCG AAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAAGCATCGCGTATGTTTTTCTCCGCGAGGACATTCAAGACGGTTCACACTGCTCGGTGGAGGATGCACGGGCCGCCATGAAGATCTACATGCTGTTTGAGAAGGAGTGGGAAAAATCCGCACTGCCCGCGTGGATCGGAGCG ATGGGTAGCGATTAACTGCTGAACGCCCCGC AGTCGCAGCGGTTATTCTTCGACAG ]
[+] EMBL CNS09BQZ [ CGTGTTGGAA GAAACCCCGTTTTCAACCCAATTCTGAAGAGTATGTTGTGACGATTTTG TGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCATGTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAGCAGATCTCACTGGAAGAGCAGTTAAGCAAATTATCGGTTAAGGATT TAAAATCTCAGGTCACAAGAACTGGGAATAGGAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGACGGCAAAGAGCACATGCTGGCACGCGTGTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTG TTCGTGAAGCCACAGGAAACGGTTACGGATTACAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGTAGATTTCAAAACGATCCGTGAGCTAGTGAGACAGCTGATTCATGGCAAAATTCTGGTAGGACATGCATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCG AAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAAGCATCGCGTATGTTTTTCTCCGCGAGGACATTCAAGACGGTTCACACTGCTCGGTGGAGGATGCACGGGCCGCCATGAAGATCTACATGCTGTTTGAGAAGGAGTGGGAAAAATCCGCACTGCCCGCGTGGATCGGAGCG ATGGGTAGCGATTAACTGCTGAACGCCCCGC AGTCGCAGCGGTTATTCTTCGACAGATTGCTTCGACTGTTATTGCATTATATTGTCATAGTTATACAATTTTAAGCCTGTTTTTACTACACAAAAAAAAAAAAAAAAGGCCAAATGTGCCCGAGC]
[-] EMBL CNS094Y3 [ c GAAACCCCGTTTTCAACCCAATTCTGAAGAGTATGTTGTGACGATTTTG TGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCATGTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAG AGATCTCACTGGAAGAGCAGTTAAGCAAATTATCGGTTAAGGATT TAAAATCTCAGGTAACAAGAACTGGGAATAGGAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGACGGCAAAGAGCACATGCTGGCACGCGTGTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTACAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGTAGATTTCAAAACGATCCGTGAGCTAGTGAGACAGCTGATTCATGGCAAAATTCTGGTAGGACATGCATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCG AAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAAGCATCGCGTATGTTTTTCTCCGCGAGGACATTCAAGACGGTTCACACTGCTCGGTGGAGGATGCACGGGCCGCCATGAAGATCTACATGCTGTTTGAGAAGGAGTGGGAAAAATCCGCACTGCCCGCGTGGATCGGAGCG ATGGGTAGCGATTAACTGCTGAACGCCCCGC AGTCGCAGCGGTTATTCTTCGACAGATTGCTTCGACTGTTATTGCATTATATTGTCATAGTTATACAATTTTAAGCCTGTTTTTAGGGGACAAAAAAAAAAAAAAA ]
[-] EMBL CNS095A1 [ AAATGTCCCAGACAAAGGAAAAAG AGATCTCACTGGAAGAGCAGTTAAGCAAATTATCGGTTAAGGATT TAAAATCTCAGGTCACAAGAACTGGGAATAGGAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGGCGGCAAAGAGCACATGCTGGAACGCGTGTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTACAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGTAGATTTCAAAACGATCCGTGAACTGGTGAGACAGCTGATTCATGGCAAAATTCTGGTAGGACATGCATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCG AAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAAGCATCGCGTATGTTTTTCTCCGCGAGGACATCCAAGACGGTTCACACTGCTCGGTGGAGGATGCACGGGCCGCCATGAAGATCTACATGCTGTTTGAGAAGGAGTGGGAAAAATCCGCACTGCCCGCGTGGATCGGAGCG ATGGGTAGCGATTAACGGTTGAACGCCCCGCAGCGAGTCGCAGCGGTTATTCTTCGACAGATTGCTTCGACTGTTATTGCATTATATTGTCATAG TATACAATTTTAAG GTTTTTt ]
[-] EMBL CNS09PAK [ AGCAGTTAAGCAAATTATCGGTTAAGGATT TAAAATCTCAGGTTACAAGAACTGGGAATAGGAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGACGGCAAAGAGGACATGCTGGCACGCGTGTCCATCGTGAACGAGCAGGGCGATGTTATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTACAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGTAGATTTCAAAACGATCCGTGAGCTAGTGAGACAGCTGATTCATGGCAAAATTCTGGTAGGACATGCATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCG AAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAAGCATCGCGTATGTTTTTCTCCGCGAGGACATTCAAGACGGTTCACACTGCTCGGTGGAGGATGCACGGGCCGCCATGAAGATCTACATGCTGTTTGAGAAGGAGTGGGAAAAATCCGCACTGCCCGCGTGGATCGGAGCG ATGGGTAGCGATTTACTGCTGAACGCCCCGC AGTCGCAGCGGTTATTCTTCGACAGATTGCTTCCACTGTTATTGCATTATATTGTCATAGTTATACAATTTTAAGCCTG ]
[-] EMBL CNS093UF [ AAATTATCGGTTAAGGGTTGTAGTAAAATCTCAGGTCACAAGAACTGGGAATAGGAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGACGGCAAAGAGCACATGCTGGCACGCGTGTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTACAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGTAGATTTCAAAACGATCCGTGAGCTAGTGAGACAGCTGATTCATGGCAAAATTCTGGTAGGACATGCATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCG AAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAAGCATCGCGTATGTTTTTCTCCGCGAGGACATTCAAGACGGTTCACACTGCTCGGTGGAGGATGCACGGGCCGCCATGAAGATCTACATGCTGTTTGAGAAGGAGTGGGAAAAATCCGCACTGCCCGCGTGGATCGGAGCG ATGGGTAGCGATTAACTGCTGAACGCCCCGC AGTCGCAGCGGTTATTCTTCGACAGATTGCTTCGACTGTTATTGCATTATATTGTCATAGTTATACAATTTTAAGC ]
[-] EMBL CNS09BR0 [ TAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCG AAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAAGCATCGCGTATGTTTTTCTCCGCGAGGACATTCAAGACGGTTCACACTGCTCGGTGGAGGATGCACGGGCCGCCATGAAGATCTACATGCTGTTTGAGAAGGAGTGGGAAAAATCCGCACTGCCCGCGTGGATCGGAGCG ATGGGTAGCGATTAACTGCTGAACGCCCCGC AGTCGCAGCGGTTATTCTTCGACAGATTGCTTCAACTGTTATTGCATTATATTGTCATAGTTATACAATTTTA ]
[-] EMBL CNS09FDH [ AGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAAGCATCGCGTATGTTTTTCTCCGCGAGGACATTCAAGACGGTTCACACTGCTCGGTGGAGGATGCACGGGCCGCCATGAAGATCTACATGCTGTTTGAGAAGGAGTGGGAAAAATCCGAACTGCCCGCGTGGATCGGAGCGTATGGGTAG ]
consensusID : consensus_9551#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 753 fasta sequence
[TTTCCACCCAATTCTGAAGAGTATGTTGTGACGATTTTGTGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCATGTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAGAGATCTCACTGGAGGAGCAGTTAAGCAAATTATCGGTTAAGGATTGTCACAAGAACTGGAAATAGAAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGACGGCAAAGAACACATGCTGGCCCGCGTGTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTACAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGTAGATTTCAAAACGATCCGTGAACTGGTGAGACAGCTGATTCATGGCAAAATTCTGGTAGGACATGTATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCGAAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAGCATCGCGTATGTTTTTCTCCGCGAGGACATCCAAGACGGNTCACACTGCTCGGTGGAGGATGCACNGGCCGCCATGAAGATTTACATGCTGTTTGAGAAGGAGTGGGAAAATCCGCACTGCCCGCGTGGATCGGAGCGATGGGTAGCG]
[+] EMBL BX620075 [TTTCCACCCAATTCTGAAGAGTATGTTGTGACGATTTTGTGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCATGTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAGAGATCTCACTGGAGGAGCAGTTAAGCAAATTATCGGTTAAGGATTGTCACAAGAACTGGAAATAGAAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGACGGCAAAGAACACATGCTGGCCCGCGTGTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTACAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGTAGATTTCAAAACGATCCGTGAACTGGTGAGACAGCTGATTCATGGCAAAATTCTGGTAGGACATGTATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCGAAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAGCATCGCGTATGTTTTTCTCCGCGAGGACATCCAAGACGGNTCACACTGCTCGGTGGAGGATGCACNGGCCGCCATGAAGATTTACATGCTGTTTGAGAAGGAGTGGGAAAATCCGCACTGCCCGCGTGGATCGGAGCGATGGGTAGCG]
consensusID : consensus_9551#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 707 fasta sequence
[CCGGCGCTCTTTATTCCCATGTAAACAACATTCCGGCAGCTGGTTCCATTCTGCTTCAAGCGCTTGTTTATCGTGTTAAAAATCGTATTTGCTTCACAAACCTTCCCTTCCGCAATGGTCGAACGAATCGAGGATCTGAACCTGCCCAACACATCGGTGACCAGGCTGATCAAGGAAGCGATTCCGGCCGATGTGAAAATCTCCAGCGAATGCCGCGTCGCGCTAGCCCGGGCAACTTCCGTGTTCGTCCTGTATCTCACATCGGCGGCCACCACGGCAGCGCAGCAAAAGAATCAAAAATCGCTCACAGCCGACCACGTGCTTAAAGGGCTGGAGGAAATCGAGTTCGAAAGTTTCATCGAGCCGTTAAAAGGCGAACTGGAGAATTTTAGAAAGATGATAAAATCACGAAAAGACAAGAAAGCGGCCAAACCGGATACGGATACGACGGTGGAAGGTGCGGTAATTGATTTGGAGAACATGGAAAACATGCAGGACGGTTGAATGGCGAGCCTCGCGCGCACGTTAGCGGTTAAGGAATAAACGATATTATTTTGTAATATTAAAAACGCACGGACCCGACGGTGTTGTTGCATGATGTTCGGAAAGAAGGAAACAATACTTCCCGGAATGTTGTGTAGTAAAAACAGGCTTAAAATTGTATAACTATGACAATATAATGCAATAACAGTCGAAGCAATCTGTCG]
[+] EMBL BM619264 [CCGGCGCTCTTTATTCCCATGTAAACAACATTCCGGCAGCTGGTTCCATTCTGCTTCAAGCGCTTGTTTATCGTGTTAAAAATCGTATTTGCTTCACAAACCTTCCCTTCCGCAATGGTCGAACGAATCGAGGATCTGAACCTGCCCAACACATCGGTGACCAGGCTGATCAAGGAAGCGATTCCGGCCGATGTGAAAATCTCCAGCGAATGCCGCGTCGCGCTAGCCCGGGCAACTTCCGTGTTCGTCCTGTATCTCACATCGGCGGCCACCACGGCAGCGCAGCAAAAGAATCAAAAATCGCTCACAGCCGACCACGTGCTTAAAGGGCTGGAGGAAATCGAGTTCGAAAGTTTCATCGAGCCGTTAAAAGGCGAACTGGAGAATTTTAGAAAGATGATAAAATCACGAAAAGACAAGAAAGCGGCCAAACCGGATACGGATACGACGGTGGAAGGTGCGGTAATTGATTTGGAGAACATGGAAAACATGCAGGACGGTTGAATGGCGAGCCTCGCGCGCACGTTAGCGGTTAAGGAATAAACGATATTATTTTGTAATATT ]
[+] EMBL BM613323 [ ccGCTTCAAGCGCTTGTGTATCGTGTTAAAAATCGTATTTGCTTCACAAACCTTCCCTTCCGCAATGGTCGAACGAATCGAGGATCTGAACCTGCCCAACACATCGGTGACCAGGCTGATCAAGGAAGCGATTCCGGCCGATGTGAAAATCTCCAGCGAATGCCGCGTCGCGCTAGCCCGGGCAACTTCCGTGTTCGTCCTGTATCTCACATCGGCGGCCACCACGGCAGCGCAGCAAAAGAATCAAAAATCGCTCACAGCCGACCACGTGCTTAAAGGGCTGGAGGAAATCGAGTTCGAAAGTTTCATCGAGCCGTTAAAAGGCGAACTGGAGAATTTTAGAAAGATGATAAAATCACGAAAAGACAAGAAAGCGGCCAAACCGGATACGGATACGACGGTGGAAGGTGCGGTAATTGATTTGGAGAACATGGAAAACATGCAGGACGGTTGAATGGCGAGCCTCGCGCGCACGTTAGCGGTTAAGGGATAAACGATATTATTTTGTAATATTAAAAACGCACGGACCCGACGGTGTTGTTGCATGATGTTCGGAAAGAAGGAAACAATACTTCCCGGAATGTTGTGTAGTAAAAACAGGCTTAAAATTGTATAACTATGACAATATAATGCAATAACAGTCGAAG ]
[+] EMBL BM650809 [ ccGAGGAAATCGAGTTCGAAAGTTTCATCGAGCCGTTAAAAGGCGAACTGGAGAATTTTAGAAAGATGATAAAATCACGAAAAGACAAGAAAGCGGCCAAACCGGATACGGATACGACGGTGGAAGGTGCGGTAATTGATTTGGAGAACATGGAAAACATGCAGGACGGTTGAATGGCGAGCCTCGCGCGCACGTTAGCGGTTAAGGAATAAACGATATTATTTTGTAATATTAAAAACGCCCGGACCCGACGGTGTTGTTGCATGATGTTCGGAAAGAAGGAAACAATACTTCCGGGAATGTTGTGTAGTAAAAACAGGCTTAAAATTGTATAACTATGACAATATAATGCAATAACAGTCGAAGCAATCTGTCG]
consensusID : consensus_9551#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 665 fasta sequence
[CCGCGGACGCGTGGGTTCGTGTGGAACGAAACCCCGTTTTCAACCCAATTCTGAAGAGTATGTTGTGACGATTTTGTGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCATGTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAGAGATCTCACTGGAAGAGCAGTTAAGCAAATTATCGGTTAAGGATTGTAGTAAAATCTCAGGTCACAAGAACTGGGAATAGGAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGACGGCAAAGAGCACATGCTGGCACGCGTGTCCATCGTGAACGAGCAGGGCGATGTG-ATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTATAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGT-GAATAA-GGGTGTAGATTTCAAAACGATCCGTGAGCTAGTGAGACAGCTGATTCATGGCAAAATTTTGGTAGGACATGCATTGAAAAACGATC-TGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCGAAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAAGCATCGCG]
[+] EMBL BM640811 [CCGCGGACGCGTGGGTTCGTGTGGAACGAAACCCCGTTTTCAACCCAATTCTGAAGAGTATGTTGTGACGATTTTGTGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCATGTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAGAGATCTCACTGGAAGAGCAGTTAAGCAAATTATCGGTTAAGGATTGTAGTAAAATCTCAGGTCACAAGAACTGGGAATAGGAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGACGGCAAAGAGCACATGCTGGCACGCGTGTCCATCGTGAACGAGCAGGGCGATGTG ATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTATAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGT GAATAA GGGTGTAGATTTCAAAACGATCCGTGAGCTAGTGAGACAGCTGATTCATGGCAAAATTTTGGTAGGACATGCATTGAAAAACGATC TGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCGAAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAAGCATCGCG]
[+] EMBL BM592101 [ ccgGTGGAACGAAACCCCGTTTTCAACCCAATTCTGAAGAGTATGTTGTGACGATTTTGTGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCATGTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAGAGATCTCACTGGAAGAGCAGTTAAGCAAATTATCGGTTAAGGATT TAAAATCTCAGGTCACAAGAACTGGGAATAGGAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGACGGCAAAGAGCACATGCTGGCACGCGTGTCCATCGTGAACGAGCAGGGCGATGTGCATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTATAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGGAATAAGGGGTGTAGATTTCAAAACGATCCGTGAGCTAGTGAGACAGCTGATTCATGGCAAAATTTTGGTAGGACATGCATTGAAAAACGATCTTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9551#0 ACTGGAAACGAACGAGCTTCGTGTGGAAGAAACCCCGTTTTCAACCCAATTCTGAAGAGT 60
consensus_9551#1 --------------------------------------TTTCCACCCAATTCTGAAGAGT 22
consensus_9551#3 -CCGCGGACGCGTGGGTTCGTGTGGAACGAAACCCCGTTTTCAACCCAATTCTGAAGAGT 59
consensus_9551#2 -------------------------------CCGGCGCTCTTTATTCCCATGTAAACAAC 29
* * * * * * ** *
consensus_9551#0 ATGTTG-TGACGATTTTGTGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCAT 119
consensus_9551#1 ATGTTG-TGACGATTTTGTGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCAT 81
consensus_9551#3 ATGTTG-TGACGATTTTGTGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCAT 118
consensus_9551#2 ATTCCGGCAGCTGGTTCCATTCTGCTTCAAGCGCTTGTTTATCGTGTTAA---AAATCGT 86
** * * ** * * *** **** * * ****** * ***** *
consensus_9551#0 GTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAGAGATCTCACTGGAAGAGCAG 179
consensus_9551#1 GTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAGAGATCTCACTGGAGGAGCAG 141
consensus_9551#3 GTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAGAGATCTCACTGGAAGAGCAG 178
consensus_9551#2 ATTTGCTTCACAAACCTTCCCTTCC--GCAATGGTCGAACGAATCGA---GGATCTGAAC 141
* * * ** *** ** ** *** *** * *
consensus_9551#0 TTAAGCAAATTATCGGTTAAGGATTT----AAAATCTCAGGTCACAAGAACTGGGAATAG 235
consensus_9551#1 TTAAGCAAATTATCGGTTAAGGATT---------------GTCACAAGAACTGGAAATAG 186
consensus_9551#3 TTAAGCAAATTATCGGTTAAGGATTGTAGTAAAATCTCAGGTCACAAGAACTGGGAATAG 238
consensus_9551#2 CTGCCCAACACATCGGTGACCAGGCTGATCAAGG----AAGCGATTCCGGCCGATGTGAA 197
* *** ****** * * * * * *
consensus_9551#0 GAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGA 295
consensus_9551#1 AAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGA 246
consensus_9551#3 GAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGA 298
consensus_9551#2 AATCTCCAGCGAATGCCGCGTCGCGCTA---GCCCGGGCAACTTCCGTGTTCGTCCTGTA 254
* * * * *** * * **** *** ** *** * * *** *** *
consensus_9551#0 TTGTGAAATGGTAGGCATTG-GACCGGACGGCAAAGAGCACA-----TGCTGGCACGCGT 349
consensus_9551#1 TTGTGAAATGGTAGGCATTG-GACCGGACGGCAAAGAACACA-----TGCTGGCCCGCGT 300
consensus_9551#3 TTGTGAAATGGTAGGCATTG-GACCGGACGGCAAAGAGCACA-----TGCTGGCACGCGT 352
consensus_9551#2 TCTCACATCGGCGGCCACCACGGCAGCGCAGCAAAAGAATCAAAAATCGCTCACAGCCGA 314
* * ** * ** * * * * ***** ** *** * **
consensus_9551#0 GTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTGCTACGTGAAGCCACAGGAAAC 409
consensus_9551#1 GTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTGCTACGTGAAGCCACAGGAAAC 360
consensus_9551#3 GTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTGCTACGTGAAGCCACAGGAAAC 412
consensus_9551#2 CCACGTGCTTAAAGGGCTGGAGGAAATCGAGTTCGAAAGTTTCATCGAGCCGTTAAAAG- 373
* * * ** * ** ** ** * **** * * * * **** **
consensus_9551#0 GGTTACGGATTACAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGT 469
consensus_9551#1 GGTTACGGATTACAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGT 420
consensus_9551#3 GGTTACGGATTATAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGT 472
consensus_9551#2 ----GCGAACTGGAGAATTTTAGAAAGATGATAAAATCACGAAAAGACAAGAAAGCGGCC 429
** * * **** * ** ** * ** * * *** *
consensus_9551#0 AGATTTCAAAACGATCCGTGAGCTAGTGAGACAGCTGATTCATGGCAAAATTCTGGTAGG 529
consensus_9551#1 AGATTTCAAAACGATCCGTGAACTGGTGAGACAGCTGATTCATGGCAAAATTCTGGTAGG 480
consensus_9551#3 AGATTTCAAAACGATCCGTGAGCTAGTGAGACAGCTGATTCATGGCAAAATTTTGGTAGG 532
consensus_9551#2 AAACCGGATACGGATACGACGGTGGAAGGTGCGG-TAATTGATTTGGAGAACATGG-AAA 487
* * * * *** ** * * * * *** ** * * *** *
consensus_9551#0 ACATGCATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCG 589
consensus_9551#1 ACATGTATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCG 540
consensus_9551#3 ACATGCATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCG 592
consensus_9551#2 ACATGCA-----GGACGGTTGAATGG---CGAGCCTCGCGCGCAC--GTTAGCGGTTAAG 537
***** * *** * **** ** *** * * ** * *
consensus_9551#0 GGACACATCCCGCTACCGTCCAATAGCGAAAAAG-GCGGGCTCGTTCGGGACGCC---TA 645
consensus_9551#1 GGACACATCCCGCTACCGTCCAATAGCGAAAAAG-GCGGGCTCGTTCGGGACGCC---TA 596
consensus_9551#3 GGACACATCCCGCTACCGTCCAATAGCGAAAAAG-GCGGGCTCGTTCGGGACGCC---TA 648
consensus_9551#2 GAATAAACGATATTATTTTGTAATATTAAAAACGCACGGACCCGACGGTGTTGTTGCATG 597
* * * * ** * **** **** * *** * ** * * * *
consensus_9551#0 GCCTTAAAAGCATCGCGTATGTTTTTCTCCGCGAGGACATTCAAGACGGTTCACACTGCT 705
consensus_9551#1 GCCTTAAA-GCATCGCGTATGTTTTTCTCCGCGAGGACATCCAAGACGGNTCACACTGCT 655
consensus_9551#3 GCCTTAAAAGCATCGCG------------------------------------------- 665
consensus_9551#2 ATGTTCGGAAAGAAGGAAACAATACTTCCCGGAATGTTGTGTAGTAAAAACAG----GCT 653
** *
consensus_9551#0 CGGTGGAGGATGCACGGGCCGCCATGAAGATCTACATGCTGTTTGAGAAGGAGTGGGAAA 765
consensus_9551#1 CGGTGGAGGATGCACNGGCCGCCATGAAGATTTACATGCTGTTTGAGAAGGAGTGGGAAA 715
consensus_9551#3 ------------------------------------------------------------
consensus_9551#2 TAAAATTGTATAACTATGACAATATAATGCAATAACAGTCGAAGCAATCTGTCG------ 707
consensus_9551#0 AATCCGCACTGCCCGCGTGGATCGGAGCGATGGGTAGCGATTAACTGCTGAACGCCCCGC 825
consensus_9551#1 A-TCCGCACTGCCCGCGTGGATCGGAGCGATGGGTAGCG--------------------- 753
consensus_9551#3 ------------------------------------------------------------
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 AGTCGCAGCGGTTATTCTTCGACAGATTGCTTCGACTGTTATTGCATTATATTGTCATAG 885
consensus_9551#1 ------------------------------------------------------------
consensus_9551#3 ------------------------------------------------------------
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 TTATACAATTTTAAGCCTGTTTTTACTACACAAAAAAAAAAAAAAAAGGCCAAATGTGCC 945
consensus_9551#1 ------------------------------------------------------------
consensus_9551#3 ------------------------------------------------------------
consensus_9551#2 ------------------------------------------------------------
consensus_9551#0 CGAGC 950
consensus_9551#1 -----
consensus_9551#3 -----
consensus_9551#2 -----
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||