cluster # 9623

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Anopheles gambiae
cluster # 9623 cluster # 9623 Sequences # 18 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9623#0 length = 873 sequences # 3
consensus_9623#1 length = 712 sequences # 13

consensus_9623#2 length = 645 sequences # 1
consensus_9623#3 length = 484 sequences # 1

consensusID : consensus_9623#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 873
fasta sequence

                              [CCGCCCACGCGTCCGTGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATTGTGTTACGGTGTCCTGTCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGTCCAAACGGCGCTCTTTTTACGTTTTTCTCTTCCAGTACGCGTTTCGGTGAATGTGTATACACTTGTTCAGGGCAGGGTAATTATCCTAATAGCAACAATCCTAGCTCCTATTACCAATGCTATATATCTAATGGTCGTTTGGTGTATAACGAGCTCGATTGTCCATCAGGTACTATATTTAATCAAACCCTGCGTTATTGTACGAGGCAGTAAGCGTATTTCATTTCACGAGCAACTTAATATTTTTTTAAACAATTTTCACCAATAATGCATTGCAAATCTTCGAATTTTGCAACTAAAAAACAATGAAAATATAATTAATTAATTGATTAAATCAATTAGCAAATTTAGAC]

[+] EMBL BM621573             [CCGCCCACGCGTCCGTGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATTGTGTTACGGTGTCCTGTCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGTCCAAACGGCGCTCTTTTTACGTTTTTCTCTTCCAGTACGCGTTTCGGTGAATGTGTATACACTTGTTCAGGGCAGGGTAATTATCCTAATAGCAACAATCCTAGCTCCTATTACCAATGCTATATATCTAATGGTCGTTTGGTGTATAACGAGCTCGATTGTCCATCAGGTACTATATTTAATCA                                                                                                                                                                        ]
[-] EMBL BX611744             [                                                                                                                                                                                                                             TAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATTGTGTTACGGTGTCCTGCCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGTCCAAACGGCGCTCTTTTTACGTTTTTCTCTTCCAGTACGCGTTTCGGTGAATGTGTATACACTTGTTCAGGGCAGGGTAATTATCCTAATAGCAACAATCCTAGCTCCTATTACCAATGCTATATATCTAATGGTCGTTTGGTGTATAACGAGCTCGATTGTCCATCAGGTACTATATTTAATCAAACCCTGCGTTATTGTACGAGGCAGTAAGCGTATTTCATTTCACGAGCAACTTAATATTTTTTTAAACAATTTTCACCAATAATGCATTGCAAATCTTCGAATTTTGCAACTAAAAAACAATGAAAATATAATTAATTAATTGATTAAATCAATT             ]
[+] EMBL BM635501             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ccgATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGTCCAAACGGCGCTCTTTTTACGTTTTTCTCTTCCAGTACGCGTTTCGGTGAATGTGTATACACTTGTTCAGGGCAGGGTAATTATCCTAATAGCAACAATCCTAGCTCCTATTACCAATGCTATATATCTAATGGTCGTTTGGTGTATAACGAGCTCGATTGTCCATCAGGTACTATATTTAATCAAACCCTGCGTTATTGTACGAGGCAGTAAGCGTATTTCATTTCACGAGCAACTTAATATTTTTTTAAACAATTTTCACCAATAATGCATTGCAAATCTTCGAATTTCGCAACTAAAAAACAATGAAAATATAATTAATTAATTGATTAAATCAACTAGCAAATTTAGAC]




>consensus_9623#0
CCGCCCACGCGTCCGTGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGA
ATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGG
CACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTAC
CGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAG
GCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCA
TGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTT
TAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATTGTGTTACGGTGTC
CTGTCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGT
ATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGTCCAAACGGCGCTCTTTTTAC
GTTTTTCTCTTCCAGTACGCGTTTCGGTGAATGTGTATACACTTGTTCAGGGCAGGGTAA
TTATCCTAATAGCAACAATCCTAGCTCCTATTACCAATGCTATATATCTAATGGTCGTTT
GGTGTATAACGAGCTCGATTGTCCATCAGGTACTATATTTAATCAAACCCTGCGTTATTG
TACGAGGCAGTAAGCGTATTTCATTTCACGAGCAACTTAATATTTTTTTAAACAATTTTC
ACCAATAATGCATTGCAAATCTTCGAATTTTGCAACTAAAAAACAATGAAAATATAATTA
ATTAATTGATTAAATCAATTAGCAAATTTAGAC

consensusID : consensus_9623#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 712
fasta sequence

                              [CGACCCACGCGTCCGCTCAAAATGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATT-GTGTTACGGTGT-CCTGCCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGT-CC-AAACGGC-GCTCTTTTTACGTTTTTCTC-TTCCAGTACGCG-TTTC-GGTGAATGTGTATACACTT-GTTCA-GGGCAGGGTAATTATCCTAATAGCAACAATCCTAGCTCCTATT]

[+] EMBL BM635662             [ GACCCACGCGTCCGCTCAAAATGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATT GTGTTACGGTGT CCTGCCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGT CC AAACGGC GCTCTTTTTACGTTTTTCTC TTCCAGTACGCGTTTTCGGGGGAATGTGTATACACTT GTTCA GGGCAGGGTAATT                              ]
[+] EMBL BM650376             [ccgCCCACGCGTCCGCTCAAAATGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATT GTGTTACGGTGT CCTGCCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGT CC AAACGGC GCTCTTTTTACGTTTTTCTC TTCCAGTACGCG TTTC GGTGAATGTGTATACACTT                                                  ]
[+] EMBL BM631561             [            CCGCTCAAAATGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGGCAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATT GTGTTACGGTGT CCTGTCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGTCCC AAACGGC GCTCTTTTTACGTTTTTCTC TT                                                                                     ]
[+] EMBL BM575493             [            CCGCTCAAAATGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATT GTGTTACGGTGT CCTGCCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGT CC AAACGGC GCTCTTTTTACGTTTTTCTC TTCCAGTACGCG TTTC GGTGAATGTGTATACACTT GTTCA GGGCAGGGTAATTATCCTAATAGCAACAAT             ]
[+] EMBL BM627536             [            CCGCTCAAAATGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATT GTGTTACGGTGT CCTGCCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGT CCAAAACGGC GCTCTTTTTACGTT                                                                                              ]
[+] EMBL BM652210             [            CCGCTCAAAATGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATT GTGTTACGGTGT CCTGCCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGT CC AAACGGC GCTCTTTTTACGTTTTTCTC TTCCAGTACGCG TTTC GGTGAATGTGTATACACTT GTTCA GGGCAGGGTAATTATCCTAATAGCA                  ]
[+] EMBL BM650318             [            CCGCTCAAAATGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATTGGTGTTACGGTGT CCTGCCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGT CC AAACGGCGGCTCTTTTTACGTTTTTCTC TTCCAGTACGCG TTTC GGTGAATGTGTATACACTT GTTCAGGGGCAGGGTAATTATCCT                         ]
[+] EMBL BM622512             [       ccggtggtCTCAAAATGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATT GTGTTACGGTGT CCTGCCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGT CC AAACGGC GCTCTTTTTACGTTTTTCTCTTTCCAGTACGCG TTTC GGTGAATGTGTATACACTTGGTTCA GGGCAGGGTAATTATCCTAATA                     ]
[+] EMBL BM614919             [                TCAAAATGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATT GTGTTACGGTGT CCTGCCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGT CC AAACGGC GCTCTTTTTACGTTTTTCTC TTCCAGTACGCG TTTC GGTGAATGTGTATACACTT GTTCA GGGCAGGGTAATTATCCTAATAGCA                  ]
[+] EMBL BM586855             [                ccgAAATGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATT GTGTTACGGTGT CCTGTCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGT CC AAACGGC GCTCTTTTTACGTTTTTCTC TTCCAGTACGCG TTTC GGTGAATGTGTATACACTT GTTCA GGGCAGGGTAATTATCCTAATAGCAACAATCCTAGCTCCTATT]
[+] EMBL BM585841             [                ccgAAATGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATT GTGTTACGGTGTCCCTGCCCA                                                                                                                                                                                                                     ]
[+] EMBL BM634941             [                             CCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGGCAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCTGATGTTCGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCAGCTAATT GTGTTACGGTGT CCTGTCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACGAGTAGAGTGTATTACGTCG                                                                                                                                                                 ]
[+] EMBL BX611745             [                                CATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGC                                                                                                                                                                                                                                                                    ]




>consensus_9623#1
CGACCCACGCGTCCGCTCAAAATGCAGTTCCACATTCTACTAACTTTCATTTTAATTACT
CTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACA
AGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACT
TCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGT
TTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGT
GTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGATCCC
AACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACC
TGTCCGCCGGGTTACGTCTTTAATATCGTCACTACATCATGCATTCGTCAAATATCAGCA
GCTAATTGTGTTACGGTGTCCTGCCCAGTAGCAGTTCCTAGCTACGTTCTTTACGGCACG
AGTAGAGTGTATTACGTCGTATGTGATGGCGTTAATCTACCCACCGAAGTATTACGGTGT
CCAAACGGCGCTCTTTTTACGTTTTTCTCTTCCAGTACGCGTTTCGGTGAATGTGTATAC
ACTTGTTCAGGGCAGGGTAATTATCCTAATAGCAACAATCCTAGCTCCTATT

consensusID : consensus_9623#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 645
fasta sequence

                              [CAAGAATCGCCACGAGGTNTAAATGCAGTTCCACATTCTACTANACTTTCATTTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTGTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTACTATTAAGTATCGTCACTACATCATGCATTCGTCGAAATATCAGCAGCTAATTGTGTTACGGTGTCCTGTCCAGTAGCAGTTCCTAGCTACGGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATAGTGATGGCGTTGNATCTACCCGAGCCGAAGTATTCACGGTGTCCAAACGGCCGCTCTTCNAGAGACGTAGA]

[+] EMBL BX469128             [CAAGAATCGCCACGAGGTNTAAATGCAGTTCCACATTCTACTANACTTTCATTTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTGTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTGTATACCTGTCCGCCGGGTTACGTACTATTAAGTATCGTCACTACATCATGCATTCGTCGAAATATCAGCAGCTAATTGTGTTACGGTGTCCTGTCCAGTAGCAGTTCCTAGCTACGGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATAGTGATGGCGTTGNATCTACCCGAGCCGAAGTATTCACGGTGTCCAAACGGCCGCTCTTCNAGAGACGTAGA]




>consensus_9623#2
CAAGAATCGCCACGAGGTNTAAATGCAGTTCCACATTCTACTANACTTTCATTTTTAATT
ACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAAC
ACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGC
ACTTCGCGGAGGCCTTGGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTAC
TGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGT
TTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTGTCCA
GATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAACGGTG
TATACCTGTCCGCCGGGTTACGTACTATTAAGTATCGTCACTACATCATGCATTCGTCGA
AATATCAGCAGCTAATTGTGTTACGGTGTCCTGTCCAGTAGCAGTTCCTAGCTACGGTTC
TTTACGGCACGAGTAGAGTGTATTACGTCGTATAGTGATGGCGTTGNATCTACCCGAGCC
GAAGTATTCACGGTGTCCAAACGGCCGCTCTTCNAGAGACGTAGA

consensusID : consensus_9623#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 484
fasta sequence

                              [GCAGAATCCCGCACGAGGTGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGGTGCGTGTACGTAAGATGAGTAGTTTTCATATCATTTGTANTCNCTNCGTATCTTGTGTTNNCCGTAGATCCCAACAACTGTCAGAACTATCATGTATGTTGTAGCCGCGTAGTGAGTCCTCAACGGTGTATA]

[+] EMBL BX468802             [GCAGAATCCCGCACGAGGTGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGCGGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGGTGCGTGTACGTAAGATGAGTAGTTTTCATATCATTTGTANTCNCTNCGTATCTTGTGTTNNCCGTAGATCCCAACAACTGTCAGAACTATCATGTATGTTGTAGCCGCGTAGTGAGTCCTCAACGGTGTATA]




>consensus_9623#3
GCAGAATCCCGCACGAGGTGCAGTTCCACATTCTACTAACTTTCATTTTAATTACTCTTA
TTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTCTCAACACAAGAG
CTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATTCTTGCACTTCGC
GGAGGCCTTGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGTGGTACTGGTTTAT
TCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCGGATGTTTGTGTAA
CATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTTCCAGGTGCGTGTA
CGTAAGATGAGTAGTTTTCATATCATTTGTANTCNCTNCGTATCTTGTGTTNNCCGTAGA
TCCCAACAACTGTCAGAACTATCATGTATGTTGTAGCCGCGTAGTGAGTCCTCAACGGTG
TATA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9623#2      -----CAAGAATCGCCACGAGGTNTAAATGCAGTTCCACATTCTACTANACTTTCATTTT 55
consensus_9623#3      ----GCAGAATCCCGCACGAGGTG------CAGTTCCACATTCTACTAA-CTTTCATTTT 49
consensus_9623#1      CGACCCACGCGTCCGCTCAAAATG------CAGTTCCACATTCTACTAA-CTTTCATTTT 53
consensus_9623#0      ------------------------------------------------------------
                                                                                  

consensus_9623#2      TAATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTC 115
consensus_9623#3      -AATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTC 108
consensus_9623#1      -AATTACTCTTATTCGCAAAGAATCATTTTGCCAGCTGGACAATGGCACTAGTACTGCTC 112
consensus_9623#0      ----------------------------CCGCCCACGCGTCCGTGGCACTAGTACTGCTC 32
                                                    ***  *  * *  *****************

consensus_9623#2      TCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATT 175
consensus_9623#3      TCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATT 168
consensus_9623#1      TCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATT 172
consensus_9623#0      TCAACACAAGAGCTTTTGTAAAAAAGGAATGTGATGGAGTAAAAACATATATTTGTGATT 92
                      ************************************************************

consensus_9623#2      CTTGCACTTCGCGGAGGCCTTGGCTTTGGCACGCAGGAAATTGAAACGACATTTACTTGT 235
consensus_9623#3      CTTGCACTTCGCGGAGGCCTTG-CTTTGGCACGCAGGAAATTGAAACGACATTTACTTGT 227
consensus_9623#1      CTTGCACTTCGCGGAGGCCTTG-CTTTGGCACGCAGGAAATTGAAACGACATTTACTTGT 231
consensus_9623#0      CTTGCACTTCGCGGAGGCCTTG-CTTTGGCACGCAGGAAATTGAAACGACATTTACTTGT 151
                      ********************** *************************************

consensus_9623#2      GGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCG 295
consensus_9623#3      GGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCG 287
consensus_9623#1      GGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCG 291
consensus_9623#0      GGTACTGGTTTATTCTGTATCGAGGGTACCGCATCTGATCGATGCGGACCAACACCTTCG 211
                      ************************************************************

consensus_9623#2      GATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTT 355
consensus_9623#3      GATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTT 347
consensus_9623#1      GATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTT 351
consensus_9623#0      GATGTTTGTGTAACATCAACAGAAAGCAGGCCGTTCACTTGCTCCGCTAGTGGACTTTTT 271
                      ************************************************************

consensus_9623#2      GTCCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAA 415
consensus_9623#3      --CCAGGTGCGTGTACGTAAGATGAGTAGTTTTCATAT-----CATTTGTANTCNCTNCG 400
consensus_9623#1      --CCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAA 409
consensus_9623#0      --CCAGATCCCAACAACTGTCAGAACTATCATGTATGTTTAGCCGCTAGTGAGTCCTCAA 329
                        **** * *    *  *   *  * **   *  ** *     *  * **     **   

consensus_9623#2      CGGTGTATACCTGTCCGCCGGGTTACGTACTATTAAGTATCGTCACTACATCATGCATTC 475
consensus_9623#3      TATCTTGT----GTTNNCCG---TAGATCCCAACAACTGTCAGAACTA--TCATGTAT-- 449
consensus_9623#1      CGGTGTATACCTGTCCGCCGGGTTACGTCTTT---AATATCGTCACTACATCATGCATTC 466
consensus_9623#0      CGGTGTATACCTGTCCGCCGGGTTACGTCTTT---AATATCGTCACTACATCATGCATTC 386
                           * *    **   ***   **  *       * * **   ****  ***** **  

consensus_9623#2      GTCGAAATATCAGCAGCTAATTGTGTTACGGTGTCCTGTCCAGTAGCAGTTCCTAGCTAC 535
consensus_9623#3      GTTGTAGCCGC-GTAGTGAGTCCT-CAACGGTGTATA----------------------- 484
consensus_9623#1      GTCA-AATATCAGCAGCTAATTGTGTTACGGTGTCCTGCCCAGTAGCAGTTCCTAGCTAC 525
consensus_9623#0      GTCA-AATATCAGCAGCTAATTGTGTTACGGTGTCCTGTCCAGTAGCAGTTCCTAGCTAC 445
                      **   *    * * **  * *  *   *******                          

consensus_9623#2      GGTTCTTTACGGCACGAGTAGAGTGTATTACGTCGTATAGTGATGGCGTTGNATCTACCC 595
consensus_9623#3      ------------------------------------------------------------
consensus_9623#1      G-TTCTTTACGGCACGAGTAGAGTGTATTACGTCGTAT-GTGATGGCGTTAATCTACCCA 583
consensus_9623#0      G-TTCTTTACGGCACGAGTAGAGTGTATTACGTCGTAT-GTGATGGCGTTAATCTACCCA 503
                                                                                  

consensus_9623#2      GAGCCGAAGTATTCACGGTGTCCAAACGGCCGCTCTTCNAGAGACGTAGA---------- 645
consensus_9623#3      ------------------------------------------------------------
consensus_9623#1      CCGAAGTA----TTACGGTGTCCAAACGGCGCTCTTTTTACGTTTTTCTCTTCCAGTACG 639
consensus_9623#0      CCGAAGTA----TTACGGTGTCCAAACGGCGCTCTTTTTACGTTTTTCTCTTCCAGTACG 559
                                                                                  

consensus_9623#2      ------------------------------------------------------------
consensus_9623#3      ------------------------------------------------------------
consensus_9623#1      CGTTTCGGTGAATGTGTATACACTTGTTCAGGGCAGGGTAATTATCCTAATAGCAACAAT 699
consensus_9623#0      CGTTTCGGTGAATGTGTATACACTTGTTCAGGGCAGGGTAATTATCCTAATAGCAACAAT 619
                                                                                  

consensus_9623#2      ------------------------------------------------------------
consensus_9623#3      ------------------------------------------------------------
consensus_9623#1      CCTAGCTCCTATT----------------------------------------------- 712
consensus_9623#0      CCTAGCTCCTATTACCAATGCTATATATCTAATGGTCGTTTGGTGTATAACGAGCTCGAT 679
                                                                                  

consensus_9623#2      ------------------------------------------------------------
consensus_9623#3      ------------------------------------------------------------
consensus_9623#1      ------------------------------------------------------------
consensus_9623#0      TGTCCATCAGGTACTATATTTAATCAAACCCTGCGTTATTGTACGAGGCAGTAAGCGTAT 739
                                                                                  

consensus_9623#2      ------------------------------------------------------------
consensus_9623#3      ------------------------------------------------------------
consensus_9623#1      ------------------------------------------------------------
consensus_9623#0      TTCATTTCACGAGCAACTTAATATTTTTTTAAACAATTTTCACCAATAATGCATTGCAAA 799
                                                                                  

consensus_9623#2      ------------------------------------------------------------
consensus_9623#3      ------------------------------------------------------------
consensus_9623#1      ------------------------------------------------------------
consensus_9623#0      TCTTCGAATTTTGCAACTAAAAAACAATGAAAATATAATTAATTAATTGATTAAATCAAT 859
                                                                                  

consensus_9623#2      --------------
consensus_9623#3      --------------
consensus_9623#1      --------------
consensus_9623#0      TAGCAAATTTAGAC 873