cluster # 9666

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Anopheles gambiae
cluster # 9666 cluster # 9666 Sequences # 19 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9666#0 length = 1783 sequences # 16

consensus_9666#1 length = 726 sequences # 2
consensus_9666#2 length = 96 sequences # 1

consensusID : consensus_9666#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 16
consensus length = 1783
fasta sequence

                              [CCGCCCACGCGTCCGGTCAACAAAAACGCGTCTCTTTCGGTGTGTGTCTTCGTCTGCCTCTTTGTTTGCTGCACAATTGGTCAGAAAAACATTTTGCATTTAATCCACCCATCGTGCTGGAAAGGAAGAGGCGA-AG-AG-CAGTGCCCTTGCAGGCTGTATTTTTTCCTAACCTGCAAAAGTTGCCCGTTTTGCTGCAGCATCCATCCGTGCTTTTGGCATACAAAAAAAGTGCTCTATTCCACACAACAAAAAGCAGCTAGCGGAATAACGAGCAGAAGCAACGGTATGGCAACCGTGATACGACTGAAGAGACGCGTGGATGAAGATCCGCTGAACGCATTTGTGCTGAACTGCAAGCG-GCAGCGTGTGGACGGTGCGACGGCAGGCGAAGAAGACCCCAATGCAAACGGGGCGGCGGCAGGCACTTCGACGATTCTAAAGTTTGCTGGCACATTCACAAAGGCTGAAGGTATCGCGTCGCACATTCAAAACATACACAAAGATCAAGCGAAAGATGCCCTGTCCCGGGTGCACCGGCCCAACATTACCTCCCGCAACCGGCTGGCCACGAAACAGACCGCACAGAACAGCCGATTCAAGATCGTCAACTGTACGCGCTCCATCACGAACGT-GGAACCGAGCGAACCGAGCGACAACAATGCGCTACCGCTCACGACCACGATCGTTGACGTCGAGCGGGAAGTGGCCCGTCTGGGGGAAGGCACTGGAGCGGCAGCAGCAGCAGCAGCAGCAGAAGTACCACCACAGCAACATAGCAGTCTGCCCGCGTTGTCAGGGGTAACGCCCGATATCGTTCATTCGGCGATGGGCAACGGGACAGCGGCGCTGCCGGAAGACCAGATGCCCTACTTTTACGAGAA--CGGCGTACACTACGTGTACGA-TCTGTACGTGGCCGACGCGAGCCAGAATGTAACGCACATCCCGTACTACACCGACAATCTGGACGATCTCAGCGTCATGGTGTGCGACGATCCACTGTACGCGTGCCACC-GGGGTCTCGATTCGGACGATTCGAGCGACGCGGATTCGGAAGACTCGAACGCGGAGAACAACTGGCGCAACGACTATCCGGACGAGGACGAGGACGGTCTGGCGGACGGTGCCAGTGTGGGCGAGGACGATATGGTGCGGGCGGTGGAGGATCTCGATTTAGATGGAGAACGGGAACTATCCTCGGACGAAGACTACGTGCGGTACGAT-GAGAATGAGGAGGACGG-TTCGCTTATCCACGGCACGATGGGGTACTGTACACGGACGAGGAAGACGATTCGGACAGCGAGGCGGAGGGCATCAACCGGGAGGATGTGCGGCGGTACGGGACGGCCTATG-CGC-GCTACAAGGCACGCATCTTGCGCGAAGAGAAACGTGATCAAGCAGCGGGCAGTAGCAGCAGCAGCTCTAGCACGGAGGATTTGAATCTGTACGATTAAATGCCGTGCGTGTGTGAGTGCGTGTA-CGGTGGGAATGAAGGGTGGTAGTAACTCATGGTGACGTTGAGCGGGTGCTACTGGCCGGCGCCGCATAGTTTGTATGCT-CGTGCCGGGGGAGGAAGAATCATGCTGTCCATCATAGTGCTAGCGTGCTCACTTTCCATTCAAACGATCGACAGTTCAGATCTCGTCGCTTATTCTCTGTAAATGTGC-TGCATTTATTCCGTGTTCTCAAAATAAGAGAGTGATTCGTGTGTTTCCTATTTCTCTTGTAAAGACTAATGTGTCATGCATGTAAAATATAAATATTTCTCAACCCTTTACCTCAACAA]

[+] EMBL BM600956             [CCGCCCACGCGTCCGGTCAACAAAAACGCGTCTCTTTCGGTGTGAGTCTTCGTCTGCCTCTTTGTTTGCTGCACAATTGGTCAGAAAAACATTTTGCATTTAATCCACCCATCGTGCTGGAAAGGAAGAGGCGA AGCAG CAGTGCCCTTGCAGGCTGTATTTTTTCCTAACCTGCAAAAGTTGCCCGTTTTGCTGCAGCATCCATCCGTGCTTTTGGCATACAAAAAAAGTGCTCTATTCCACACAACAAATAGCGGCTAGCGGAATAACGAGCAGAAGCAACGGTATGGCAACCGTGATACGACTGAAGAGACGCGTGGATGAAGATCCGCTGAACGCATTTGTGCTGAACTGCAAGCG GCAGCGTGTGGACGGTGCGACGGCAGGCGAAGAAGACCCCAATGCAAACGGGGCGGCGGCAGGCACTTCGACGATTCTAAAGTTTGCTGGCACATTCACAAAGGCTGAAGGTATCGCGTCGCACATTCAAAACATACACAAAGATCAAGCGAAAGATGCCCTGTCCCGGGTGCACCGGCCCAACATTACCTCCCGCAACCGGCTGGCCACGAAACAGACCGCACAGAACAGCCGATTCAAGATCGTCAACTGTACGCGCTCCATCACGAACGTGGGAACCGAGCGAACCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM578557             [                 ccgCAAAAACGCGTCTCTTTCGGTGTGTGTCTTCGTCTGCCTCTTTGTTTGCTGCACAATTGGTCAGAAAAACATTTTGCATTTAATCCACCCATCGTGCTGGAAAGGAAGAGGCGA AGCAG CAGTGCCCTTGCAGGCTGTATTTTTTCCTAACCTGCAAAAGTTGCCCGTTTTGCTGCAGCATCCATCCGTGCTTTTGGCATACAAAAAAAGTGCTCTATTCCACACAACAAAAAGCGGCTAGCGGAATAACGAGCACAAGCAACGGTATGGCAACCGTGATACGACTGAAGAGACGCGTGGATGAAGATCCGCTGAACGCATTTGTGCTGAACTGCAAGCG GCAGCGTGTGGACGGTGCGACGGCAGGCGAAGAAGACCCCAATGCAAACGGGGCGGCGGCAGGCACTTCGACGATTCTAAAGTTTGCTGGCACATTCACAAAGGCTGAAGGTATCGCGTCGCACATACAAAACATACACAAAGATCAAGCGAAAGATGCCCTGTCCCGGGTGCACCGGCCCAACATTACCTCCCGCAACCGGCTGGCCACGAAACAGACCGCACAGAACAGCCGATTCAAGATCGTCAACTGTACGCGCTCCATCACGAACGT GGAACCGAGCGAACCGAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS09P2L             [                                      GGTGTGTGTCTTCGTCTGCCTCTTTGTTTGCTGCACAATTGGTCAGAAAAACATTTTGCATTTAATCCACCCATCGTGCTGGAAAGGAAGAGGCGA AG AG CAGTGCCCTTGCAGGCTGTATTTTTTCCTAACCTGCAAAAGTTGCCCGTTTTGCTGCAGCATCCATCCGTGCTTTTGGCATACAAAAAAAGTGCTCTATTCCACACAACAAAAAGCGGCTAGCGGAATAACGAGCAGAAGCAACGGTATGGCAACCGTGATACGACTGAAGAGACGCGTGGATGAAGATCCGCTGAACGCATTTGTGCTGAACTGCAAGCG GCAGCTTGTGGACGGTGCGACGGCAGGCGAAGAAGACCCCAATGCAAACGGGGCGGCGGCAGGCACATCGACGATTCTAAAGTTTGCTGGCACATTCACAAAGGCTGAAGGTATCGCGTCGCACATTCAAAACATACACAAAGATCAAGCGAAAGATGCCCTGTCCCGGGTGCACCGGCCCAACATTACCTCCCGCAACCGGCTGGCCACGAAACAGACCGCACAGAACAGCCGATTCAAGATCGTCAACTGTACGCGCTCCATCACGAACGT GGAACCGAGCGAACCGAGCGACAACAATGCGCTACCGCTCACGACCACGATCGTTGACGTCGAGCGGGAAGTGGCCCGTCTGGGGGAAGGCACTGGAGCGGCA CAGCAGCAGCAGCAGCAGAAGTACCACCACAGCAACATAGCAGTCTGCCCGCGTTGTCAGGGGTAACGCCCGATATCGTTCATTCGGCGATGGGCAACGGGACAGCGGCGCTGCCGGAAGACCAGATGCCCTACTTTTACGAGAA  CGGCGTACACTACGTGTA GATTCTGTACGTGGCCGACGCGAGCCAGAATGTAACGCACATCCCGTACTACACCGACAATCTGGACGATCTCAGCGTCATGGTGTGCGACGATCCACTGTACGCGTGCCACC GGGGTCTCGATTCGGACGATTCGAGCGACGCGGATTCGGAAGACTCGAACGCGGAGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CNS09BWL             [                                                                                                       TCCACCCATCGTGCTAGAAAGGAAGAGGCGA AG AG CAGTGCCCTTGCAGGCTGTATTTTTTCCTAACCTGCAAAAGTTGCCCGTTTTGCTGCAGCATCCATCCGTGCTTTTGGCATACAAAAAAAGTGCTCTATTCCACACAACAAAAAGCAGCTAGCGGAATAACGAACAGAAGCAACGGTATGGCAACCGTGATACGACTGAAGAGACGCGTGGATGAAGATCCGCTGAACGCATTTGTGCTGAACTGC AGCG GCAGCTTGTGGACGGTGCGACGGCAGGCGAAGAAGACCCCAATGCAAACGGGGCGGCGGCAGGCACTTCGACGATTTTAAAGTTTGCTGGCACATTCACAAAGGCTGAAGGTATCGCGTCGCACATTCAAAACATACACAAAGATCAAGCGAAAGATGCCCTGTCCCGGGTGCACCGGCCCAACATTACCTCCCGCAACCGGCTGGCCACGAAACAGACCGCACAGAACAGCCGATTCAAGATCGTCAACTGTACGCGCTCCATCACGAACGT GGAACCGAGCGAACCGAGCGACAACAATGCGCTACCGCTCACGACCACGATCGTTGACGTCGAGCGGGAAGTGGCCCGTCTGGGGGAAGGCACTGGAGCGGCAGCAGCAGCAGCAGCAGCAGAAGTACCACCACAGCAACATAGTAGTCTGCCCGCGTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CNS09BYF             [                                                                                                                  TGCTAGAAAGGAAGAGGCGA CG AGACAGTGCCCTTGCAGGCTGTATTTTTTCCTAACCTGCAAAAGTTGCCCGTTTTGCTGCAGCATCCATCCGTGCTTTTGGCATACAAAAAAAGTGCTCTATTCCACACAACAAAAAGCAGCTAGCGGAATAACGAACAGAAGCAACGGTATGGCAACCGTGATACGACTGAAGAGACGCGTGGATGAAGATCCGCTGAACGCATTTGTGCTGAACTGCAAGCGCGCAGCGTGTGGACGGTGCGACGGCAGGCGAAGAAGACCCCAATGC AACGGGGCGGCGGCAGGCACTTCGACGATTTTAAAGTTTGCTGGCACATTCACAAAGGCTGAAGGTATCGCGTCGCACATTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS08SAO             [                                                                                                                                AGGCGACAG A  CAGTGCCCTTGCAGGCTGTATTTTTTCCTAACCTGCAAAAGTTGCCCGTTTTGCTGCAGCATCCATCCGTGCTTTTGGCATACAAAAAAAGTGCTCTATTCCACACAACAAAAAGCAGCTAGCGGAATAACGAACAGAAGCAACGGTATGGCAACCGTGATACGACTGAAGAGACGCGTGGATGAAGATCCGCTGAACGCATTTGTGCTGAACTGCAAGCG GCAGCGTGTGGACGGTGCGACGGCAGGCGAAGAAGACCCCAATGCAAACGGGGCGGCGGCAGGCACTTCGACGATTTTAAAGTTTGCTGGCACATTCACAAAGGCTGAAGGTATCGCGTCGCACATTCAAAACATACACAAAGATCAAGCGAAAGATGCCCTGTCCCGGGTGCACCGGCCCAACATTACCTCCCGCAACCGGCTGGCCACGAAACAGACCGCACAGAACAGCCGATTCAAGATCGTCAACTGTACGCGCTCCATCACGAACGT GGAACGGGGCGAACCGAGCGACAACAATGCGCTACCGCTCACGACCACGATCGTTGACGTCGAGCGGGAAGTGGCCCGTCTGGGGGAAGGCACTGGAGCGGCA CAGCAGCAGCAGCAGCAGAAGTACCACCACAGCAACATAGTAGTCTGCCCGCGTTGTCAGGGGTAACGCCCGATATCGTTCATTCGGCGATGGGCAACGGGACAGCGGCGCTGCCGGAAGACCAGATGCCCTACTTTTACGAGAA  CGGCGTACACTACGTGTACGA TCTGTACGTGGCCGACGCGAGCCAGAATGTAACGCACATCCCGTACTACACCGACAATCTGGACGATCTCAGCGTCATGGTGTGCGACGATCCACTGTACGCGTGCCACCGGGGGTCTCGATTCGGACGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX606975             [                                                                                                                                    GA AGCAG CAGTGCCCTTGCAGGCTGTATTTTTTCCTAACCTGCAAAAGTTGCCCGTTTTGCTGCAGCATCCATCCGTGCTTTTGGCATACAAAAAAAGTGCTCTATTCCACACAACAAAAAGCAGCTAGCGGAATAACGAACAGAAGCAACGGTATGGCAACCGTGATACGACTGAAGAGACGCGTGGATGAAGATCCGCTGAACGCATTTGTGCTGAACTGCAAG G GCAGCGTGTGGACGGTGCGACGGCAGGCGAAGAAGACCCCAATGCAAACGGGGCGGCGGCAGGCACTTCGACGATTTTAAAGTTTGCTGGCACATTCACAAAGGCTGAAGGTATCGCGTCGCACATTCAAAACATACACAAAGATCAAGCGAAAGATGCCCTGTCCCGGGTGCACCGGCCCAACATTACCTCCCGCAACCGGCTGGCCACGAAACAGACCGCACAGAACAGCCGATTCAAGATCGTCAACTGTACGCGCTCCATCACGAACGT GGAACCGAGCGAACCGAGCGACAACAATGCGCTACCGCTCACGACCACGATCGTTGACGTCGAGCGGGAAGTGGCCCGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX628023             [                                                                                                                                                                                                                                                                                GAGCAGAAGCAACGGTATGGCAACCGTGATACGACTGAAGAGACGCGTGGATGAAGATCCGCTGAACGCATTTGTGCTGAACTGCAAGCG GCAGCGTGTGGACGGTGCGACGGCAGGCGAAGAAGACCCCAATGCAAACGGGGCGGCGGCAGGCACATCGACGATTCTAAAGTTTGCTGGCACATTCACAAAGGCTGAAGGTATCGCGTCGCACATTCAAAACATACACAAAGATCAAGCGAAAGATGCCCTGTCCCGGGTGCACCGGCCCAACATTACCTCCCGCAACCGGCTGGCCACGAAACAGACCGCACAGAACAGCCGATTCAAGATCGTCAACTGTACGCGCTCCATCACGAACGT GGAACCGAGCGAACCGAGCGACAACAATGCGCTACCGCTCACGACCACGATCGTTGACGTCGAGCGGGAAGTGGCCCGTCTGGGGGAAGGCACTGGAGCGGCAGCAGCAGCAGCAGCAGCAGAAGTACCACCACAGCAACATAGCAGTCTGCCCGCGTTGTCAGGGGTAACGCCCGATATCGTTCATTCGGCGATGGGCAACGGGACAGCGGCGCTGCCGGAAGACCAGATGCCCTACTTTTACGAGAA  CGGCGTACACTACGTGTACGA TCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CNS08OGK             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CCACGAAACAGACCGCACAGAACAGCCGATTCAAGATCGTCAACTGTACGCGCTCCATCACGAACGT GGAACCGAGCGAACCGAGCGACAACAATGCGCTACCGCTCACGACCACGATCGTTGACGTCGAGCGGGAAGTGGCCCGTCTGGGGGAAGGCACTGGAGCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AGA282846            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CACGACCACGATCGTTGACGTCGAGCGGGAAGTGGCCCGTCTGGGGGAAGGCACTGGAGCGGCAGCAGCAGCAGCAGCAGCAGAAGTACCACCACAGCAACATAGCAGTCTGCCCGCGTTGTCAGGGGTAACGCCCGATATCGTTCATTCGGCGATGGGCAACGGGACAGCGGCGCTGCCGGAAGACCAGATGCCCTACTTTTACGAGAA  CGGCGTACACTACGTGTACGA TCTGTACGTGGCCGACGCGAGCCAGAATGTAACGCACATCCCGTACTACACCGACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CNS09P2M             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGGAAGACCAGATGCCCTACTTTTACGAGAAACCGGGGT  ACTACGTGTACGA TCTGTACGTGGCCGACGCGAGCCAGAATGTAACGCACATCCCGTACTACACCGACAATCTGGACGATCTCAGCGTCATGGTGTGCGACGATCCACTGTACGCGTGCCACC GGGGTCTCGATTCGGACGATTCGAGCGACGCGGATTCGGAAGACTCGAACGCGGAGAACAACTGGCGCAACGACTATCCGGACGAGGACGAGGACGGTCTGGCAGACGGTGCCAGTGTGGGCGAGGACGATATGGTGCGGGCGGTGGAGGATCTCGATTTAGATGGAGAACGGGAACTATCCTCGGACGAAGACTACGTGCGGTACGAT GAGAATGAGGAGGACGGTTTCGCTTATCCACGGCACGATGGGGTACTGTACACGGACGAGGAAGACGATTCGGACAGCGAGGCGGAGGGCATCAACCGGGAGGATGTGCGGCGGTACGGGACGGCCTATG CGC GCTACAAGGCACGCATCTTGCGCGAAGAGAAACGTGATCAAGCAGCGGGCAGTAGCAGCAGCAGCTCTAGCACGGAGGATTTGAATCTGTACGATTAAATGACGTGCGTGT        GTGTA CGGTGGGAATGAAGGGTGGTAGTAACTCATGGTGACGTTGAGCGGGTGCTACCGGCCGGCGCCGCATAGTTTCTATGCT CGTGCCGGGGGAGGAAGAATCATGCTGTCCATCATAGTGCTAGCGTGCTCACTTTCCATTCAAACGATCGACAGTTCAGATCTCGTCGCTTATTCTCTGTAAATGTGC TGCATTTATTCCGTGTTCTCAAAATAAGAGAGTGATCCGTGTGTTTCCTATTTCTCTTGTAAAGACTAATGTGTCATGCATGTAAAATATAAATATTTCTCAACCCTTTACCTCAACAA]
[-] EMBL CNS08SAP             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGTACGA TCTGTACGTGGCCGACGCGAGCCAGAATGTAACGCACATCCCGTACTACACCGACAATCTGGACGATCTCAGCGTCATGGTGTGCGACGATCCACTGTACGCGTGCCACC GGGGTCTCGATTCGGACGATTCGAGCGACGCGGATTCGGAAGACTCGAACGCGGAGAACAACTGGCGCAACGACTATCCGGACGAGGACGAGGACGGTCTGGCGGACGGTGCCAGTGTGGGCGAGGACGATATGGTGCGGGCGGTGGAGGATCTCGATTTAGATGGAGAACGGGAACTATCCTCGGACGAAGACTACGTGCGGTACGATCCCCAATGAGGAGGACGG TTCGCTTATCCACGGCACGATGGGGTACTGTACACGGACGAGGAAGACGATTCGGACAGCGAGGCGGAGGGCATCAACCGGGAGGATGTGCGGCGGTACGGGACGGCCTATG CGC GCTACAAGGCACGCTTCTTGCGCGAAGAGAAACGTGATCAAGCAGCGGGCAGTAGCAGCAGCAGCTCTAGCACGGAGGATTTGAATCTGTACGATTAAATGCCGTGCGTGTGTGAGTGCGTGTACCGGTGGGAATGAAGGGTGGTAGTAACTCATGGTGACGTTGAGCGGGTGCTACTGGCCGGCGCCGCATAGTTTGTATGCTCCGTGCCGGGGGAGGAAGAATCATGCTGTCCATCATAGTGCTAGCGTGCTCACTTTCCATTCAAACGATCGACAGTTCAGATCTCGTCGCTTATTCTCTGTAAATGTGC TGCATTTATTCCGTGTTCTCAAAATAAGAGAGTGATTCGTGTGTTTCCTATTTCTCTTGTAAAGACTAATGTGTCATGCATGTAAAATATAAATATTTC                    ]
[-] EMBL CNS08Y46             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGTGTGCGACGATCCACTGTACGCGTGCCACC GGGGTCTCGATTCGGACGATTCGAGCGACGCGGATTCGGAAGACTCGAACGCGGAGAACGACTGGCGCAACGACTATCCGGACGAGGACGAGGACGGTCTGGCGGACGGTGCCAGTGTGGGCGAGGACGATATGGTGCGGGCGGTGGAGGATCTCGATTTAGATGGAGAACGGGAACCATCCTCGGACGAAGACTACGTGCGGTACGAT GAGAATGAGTAGGACGG TTCGCTTATCCACGGCACGATGGGGTACTGTACACGGACGAGGAAGACGATTCGGACAGCGAGGCGGAGGGCATCAACCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CNS08OGL             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GATCCACTGTACGCGTGCCACC GGGGTCTCGATTCGGACGATTCGAGCGACGCGGATTCGGAAGACTCGAACGCGGAGAACGACTGGCGCAACGACTATCCGGACGAGGACGAGGACGGTCTGGCGGACGGTGCCAGTGTGGGCGAGGACGATATGGTGCGGGCGGTGGAGGATCTCGATTTAGATGGAGAACGGGAACTATCCTCGGACGAAGACTACGTGCGGTACGAT GAGAATGAGGAGGACGC TTCGCTTATCCACGGCACGATGGGGTACTGTACACGGACGAGGAAGACGATTCGGACAGCGAGGCGGAGCGCATCAACCGGGAGGATGTGCGGCGGTACGGGACGGTTTATG CGC GCTAAAAGGAAGGCAT                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CNS09BWM             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTGTACGCGTGCCACC GGGGTCTCGATTCGGACGATTCGAGCGACGCGGATTCGGAAGACTCGAACGCGGAGAACAACTGGCGCAACGACTATCCGGACGAGGACGAGGACGGTCTGGCGGACGGTGCCAGTGTGGGCGAGGACGATATGGTGCGGGCGGTGGAGGATCTCGATTTAGATGGAGAACGGGAACTATCCTCGGACGAAGACTACGTGCGGTACGAT GAGAATGAGGAGGACGC TTCGCTTATCCACGGCACGATGGGGTACTGTACACGGACGAGGAAGACGATTCGGACAGCGAGGCGGAGGGCATCAACCGGGAGGATGTGCGGCGGTACGGGACGGCCTATG CGC GCTACAAGGCACGCATCTTGCGCGAAGAGAAACGTGATCAAGCAGCGGGCAGTAGCAGCAGCAGCTCTAGCACGGAGGATTTGAATCTGTACGATTAAATGCCGTGCGTGTGTGAGTGCGTGTA CGGTGGGAATGAAGGGTGGTAGTAACTCATGGTGACGTTGAGCGGGTGCTACTGGCCGGCGCCGCATAGTTTGTATGCT CGTGCCGGGGGAGGAAGAATCATGCTGTCCATCATAGTGCTAGCGTGCTCACTTTCCATTCAAACGATCGACAGTTCAGATCTCGTCGCTTATTCTCTGTAAATGTGC TGCATTTATTCCGTGTTCTCAAAATAAGAGAGTGATTCGTGTGTTTCCTATTTCTCTTGTAAAGACTAATGTGTCATGCATGTAAAATATAAATATTTCTCAA                ]
[-] EMBL CNS09BYG             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CGGGAGGATGTGCGGCGGTACGGGACGGCCTATGCCGCGGCTACAAGGCACGCATCTTGCGCGAAGAGAAACGTGATCAAGCAGC GGCAGTAGCAGCAGCAGCTCTAGCACGGAGGATTTGAATCTGTACGATTAAATGCCGTGCGTGTGTGAGTGCGTGTA CGGTGGGAATGAAGGGTGGTAGTAACTCATGGTGACGTTGAGCGGGTGCTACTGGCCGGCGCCGCATAGTTTGTATGCT CGTGCCGGGGGAGGAAGAATCATGCTGTCCATCATAGTGCTAGCGTGCTCACTTTCCATTCAAACGATCGACAGTTCAGATCTCGTCGCTTATTCTCTGTAAATGTGCGTGCATTTATTCCGTGTTCTCAAAATAAGAGAGTGATTCGTGTGTTTCCTATTTCTCTTGTAAAGACTAATGTGTCATGCATGTAAAATATAAATA TTCTCAA                ]




>consensus_9666#0
CCGCCCACGCGTCCGGTCAACAAAAACGCGTCTCTTTCGGTGTGTGTCTTCGTCTGCCTC
TTTGTTTGCTGCACAATTGGTCAGAAAAACATTTTGCATTTAATCCACCCATCGTGCTGG
AAAGGAAGAGGCGAAGAGCAGTGCCCTTGCAGGCTGTATTTTTTCCTAACCTGCAAAAGT
TGCCCGTTTTGCTGCAGCATCCATCCGTGCTTTTGGCATACAAAAAAAGTGCTCTATTCC
ACACAACAAAAAGCAGCTAGCGGAATAACGAGCAGAAGCAACGGTATGGCAACCGTGATA
CGACTGAAGAGACGCGTGGATGAAGATCCGCTGAACGCATTTGTGCTGAACTGCAAGCGG
CAGCGTGTGGACGGTGCGACGGCAGGCGAAGAAGACCCCAATGCAAACGGGGCGGCGGCA
GGCACTTCGACGATTCTAAAGTTTGCTGGCACATTCACAAAGGCTGAAGGTATCGCGTCG
CACATTCAAAACATACACAAAGATCAAGCGAAAGATGCCCTGTCCCGGGTGCACCGGCCC
AACATTACCTCCCGCAACCGGCTGGCCACGAAACAGACCGCACAGAACAGCCGATTCAAG
ATCGTCAACTGTACGCGCTCCATCACGAACGTGGAACCGAGCGAACCGAGCGACAACAAT
GCGCTACCGCTCACGACCACGATCGTTGACGTCGAGCGGGAAGTGGCCCGTCTGGGGGAA
GGCACTGGAGCGGCAGCAGCAGCAGCAGCAGCAGAAGTACCACCACAGCAACATAGCAGT
CTGCCCGCGTTGTCAGGGGTAACGCCCGATATCGTTCATTCGGCGATGGGCAACGGGACA
GCGGCGCTGCCGGAAGACCAGATGCCCTACTTTTACGAGAACGGCGTACACTACGTGTAC
GATCTGTACGTGGCCGACGCGAGCCAGAATGTAACGCACATCCCGTACTACACCGACAAT
CTGGACGATCTCAGCGTCATGGTGTGCGACGATCCACTGTACGCGTGCCACCGGGGTCTC
GATTCGGACGATTCGAGCGACGCGGATTCGGAAGACTCGAACGCGGAGAACAACTGGCGC
AACGACTATCCGGACGAGGACGAGGACGGTCTGGCGGACGGTGCCAGTGTGGGCGAGGAC
GATATGGTGCGGGCGGTGGAGGATCTCGATTTAGATGGAGAACGGGAACTATCCTCGGAC
GAAGACTACGTGCGGTACGATGAGAATGAGGAGGACGGTTCGCTTATCCACGGCACGATG
GGGTACTGTACACGGACGAGGAAGACGATTCGGACAGCGAGGCGGAGGGCATCAACCGGG
AGGATGTGCGGCGGTACGGGACGGCCTATGCGCGCTACAAGGCACGCATCTTGCGCGAAG
AGAAACGTGATCAAGCAGCGGGCAGTAGCAGCAGCAGCTCTAGCACGGAGGATTTGAATC
TGTACGATTAAATGCCGTGCGTGTGTGAGTGCGTGTACGGTGGGAATGAAGGGTGGTAGT
AACTCATGGTGACGTTGAGCGGGTGCTACTGGCCGGCGCCGCATAGTTTGTATGCTCGTG
CCGGGGGAGGAAGAATCATGCTGTCCATCATAGTGCTAGCGTGCTCACTTTCCATTCAAA
CGATCGACAGTTCAGATCTCGTCGCTTATTCTCTGTAAATGTGCTGCATTTATTCCGTGT
TCTCAAAATAAGAGAGTGATTCGTGTGTTTCCTATTTCTCTTGTAAAGACTAATGTGTCA
TGCATGTAAAATATAAATATTTCTCAACCCTTTACCTCAACAA

consensusID : consensus_9666#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 726
fasta sequence

                              [ATCGGCACGAGGCGCTATCGCTCACGACCACGATCGTTGACGTCGAGCGGGAAGTGGCCCGTCTGGGGGAAGGCACTGGAGCGGCAGCAGCAGCAGCAGCAGCAGAAGTACCACCACAGCAACATAGCAGTCTGCCCGCGTTGTCAGGGGTGAACGCCCGATATCGTTCATTCGGCGATGGGCAACGGGACAGCGGCGCTGCCGGAAGACCAGATGCCCTACTTTTACNNNAACGGCGTACACTACGTGTACGNTCTGTACGTGGCCGACGCGAGCCAGAATGTAACGCACATCCCGTACTACACCGACAATCTGGACGATCTCAGGTTGGTGCTGATAGAAGACGCGTACTTTGCATTCTACTCGTTCATTTAAACGCCGGGCCACACTGCGCACTGCCGGACAACACACACTACCAACTANGACATAGTGTAATGNNCTAGGNAGNAGNNTCGGCTCGGCGCGTGTGTGTGTGTGAGTGTGTTCGTCACCACCACCACCATCACCGGAGGGCGGGAGGGANTGGTGATTGTCNCAGGGCACAGTTTTGCTAGTACCAGGCGCTAACGCTTTTGTCCTTTCTATCTCTCGCTCTCTCTCTATCTCCCATTTTCCCCTCATTTACTGATTACTGATAGTTAGCTGTAAGAATNAGAACAAAAGAAAAAGAACACAACGCCCCCGGNATTACAACATTTACAAACAAACTTTCGCTGATAAAANTAT]

[+] EMBL BX619794             [ATCGGCACGAGGCGCTATCGCTCACGACCACGATCGTTGACGTCGAGCGGGAAGTGGCCCGTCTGGGGGAAGGCACTGGAGCGGCAGCAGCAGCAGCAGCAGCAGAAGTACCACCACAGCAACATAGCAGTCTGCCCGCGTTGTCAGGGGTGAACGCCCGATATCGTTCATTCGGCGATGGGCAACGGGACAGCGGCGCTGCCGGAAGACCAGATGCCCTACTTTTACNNNAACGGCGTACACTACGTGTACGNTCTGTACGTGGCCGACGCGAGCCAGAATGTAACGCACATCCCGTACTACACCGACAATCTGGACGATCTCAGGTTGGTGCTGATAGAAGACGCGTACTTTGCATTCTACTCGTTCATTTAAACGCCGGGCCACACTGCGCACTGCCGGACAACACACACTACCAACTANGACATAGTGTAATGNNCTAGGNAGNAGNNTCGGCTCGGCGCGTGTGTGTGTGTGAGTGTGTTCGTCACCACCACCACCATCACCGGAGGGCGGGAGGGANTGGTGATTGTCNCAGGGCACAGTTTTGCTAGTACCAGGCGCTAACGCTTTTGTCCTTTCTATCTCTCGCTCTCTCTCTATCTCCCATTTTCCCCTCATTTACTGATTACTGATAGTTAGCTGTAAGAATNAGAACAAAAGAAAAAGAACACAACGCCCCCGGNATTACAACATTTACAAACAAACTTTCGCTGATAAAANTAT]
[-] EMBL AGA281223            [                                                                                                                                                                                                                                                                                                                                         GGTGCTGATAGAAGACGCGTACTTTGCATTCTACTCGTTCATTTAAACGCC GGCCACACTGCGCACTGCCGGACAACACACACTACCAACTA GACATAGTGTAATGGCCTAGG AG AGGATCGGCTCGGCGCGTGTGTGTGTGTGAGTGTGTTCGTCACCACCACCACCATCACCGGAGGGCGGGAGGGAGTGGTGATTGTCGCAGGGCACAGTTTTGCTAGTACCAGGCGCTAACGCTTTTGTCCTTTCTATCTCTCGCTCTCTCTCTATCTCCCATTTTCCCCTCATTTACTGATTACTGATAGTTAGCTGTAAGAATTAGAACAAAAaa                                                              ]




>consensus_9666#1
ATCGGCACGAGGCGCTATCGCTCACGACCACGATCGTTGACGTCGAGCGGGAAGTGGCCC
GTCTGGGGGAAGGCACTGGAGCGGCAGCAGCAGCAGCAGCAGCAGAAGTACCACCACAGC
AACATAGCAGTCTGCCCGCGTTGTCAGGGGTGAACGCCCGATATCGTTCATTCGGCGATG
GGCAACGGGACAGCGGCGCTGCCGGAAGACCAGATGCCCTACTTTTACNNNAACGGCGTA
CACTACGTGTACGNTCTGTACGTGGCCGACGCGAGCCAGAATGTAACGCACATCCCGTAC
TACACCGACAATCTGGACGATCTCAGGTTGGTGCTGATAGAAGACGCGTACTTTGCATTC
TACTCGTTCATTTAAACGCCGGGCCACACTGCGCACTGCCGGACAACACACACTACCAAC
TANGACATAGTGTAATGNNCTAGGNAGNAGNNTCGGCTCGGCGCGTGTGTGTGTGTGAGT
GTGTTCGTCACCACCACCACCATCACCGGAGGGCGGGAGGGANTGGTGATTGTCNCAGGG
CACAGTTTTGCTAGTACCAGGCGCTAACGCTTTTGTCCTTTCTATCTCTCGCTCTCTCTC
TATCTCCCATTTTCCCCTCATTTACTGATTACTGATAGTTAGCTGTAAGAATNAGAACAA
AAGAAAAAGAACACAACGCCCCCGGNATTACAACATTTACAAACAAACTTTCGCTGATAA
AANTAT

consensusID : consensus_9666#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 96
fasta sequence

                              [ACAAACACGGCCGTCCCGCTGTGGCCCTCTCCCTTTAGAGTATATCTTTATCAGCGAAAGTTGTTTGTAAATGTTGTAATCCGGGGGCGTTGTGTT]

[+] EMBL CNS08DWZ             [ACAAACACGGCCGTCCCGCTGTGGCCCTCTCCCTTTAGAGTATATCTTTATCAGCGAAAGTTGTTTGTAAATGTTGTAATCCGGGGGCGTTGTGTT]




>consensus_9666#2
ACAAACACGGCCGTCCCGCTGTGGCCCTCTCCCTTTAGAGTATATCTTTATCAGCGAAAG
TTGTTTGTAAATGTTGTAATCCGGGGGCGTTGTGTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9666#0      CCGCCCACGCGTCCGGTCAACAAAAACGCGTCTCTTTCGGTGTGTGTCTTCGTCTGCCTC 60
consensus_9666#1      ------------------------------------------------------------
consensus_9666#2      ------------------------------------------------------------
                                                                                  

consensus_9666#0      TTTGTTTGCTGCACAATTGGTCAGAAAAACATTTTGCATTTAATCCACCCATCGTGCTGG 120
consensus_9666#1      ------------------------------------------------------------
consensus_9666#2      ------------------------------------------------------------
                                                                                  

consensus_9666#0      AAAGGAAGAGGCGAAGAGCAGTGCCCTTGCAGGCTGTATTTTTTCCTAACCTGCAAAAGT 180
consensus_9666#1      ------------------------------------------------------------
consensus_9666#2      ------------------------------------------------------------
                                                                                  

consensus_9666#0      TGCCCGTTTTGCTGCAGCATCCATCCGTGCTTTTGGCATACAAAAAAAGTGCTCTATTCC 240
consensus_9666#1      ------------------------------------------------------------
consensus_9666#2      ------------------------------------------------------------
                                                                                  

consensus_9666#0      ACACAACAAAAAGCAGCTAGCGGAATAACGAGCAGAAGCAACGGTATGGCAACCGTGATA 300
consensus_9666#1      ------------------------------------------------------------
consensus_9666#2      ------------------------------------------------------------
                                                                                  

consensus_9666#0      CGACTGAAGAGACGCGTGGATGAAGATCCGCTGAACGCATTTGTGCTGAACTGCAAGCGG 360
consensus_9666#1      ------------------------------------------------------------
consensus_9666#2      ------------------------------------------------------------
                                                                                  

consensus_9666#0      CAGCGTGTGGACGGTGCGACGGCAGGCGAAGAAGACCCCAATGCAAACGGGGCGGCGGCA 420
consensus_9666#1      ------------------------------------------------------------
consensus_9666#2      ------------------------------------------------------------
                                                                                  

consensus_9666#0      GGCACTTCGACGATTCTAAAGTTTGCTGGCACATTCACAAAGGCTGAAGGTATCGCGTCG 480
consensus_9666#1      ------------------------------------------------------------
consensus_9666#2      ------------------------------------------------------------
                                                                                  

consensus_9666#0      CACATTCAAAACATACACAAAGATCAAGCGAAAGATGCCCTGTCCCGGGTGCACCGGCCC 540
consensus_9666#1      ------------------------------------------------------------
consensus_9666#2      ------------------------------------------------------------
                                                                                  

consensus_9666#0      AACATTACCTCCCGCAACCGGCTGGCCACGAAACAGACCGCACAGAACAGCCGATTCAAG 600
consensus_9666#1      ------------------------------------------------------------
consensus_9666#2      ------------------------------------------------------------
                                                                                  

consensus_9666#0      ATCGTCAACTGTACGCGCTCCATCACGAACGTGGAACCGAGCGAACCGAGCGACAACAAT 660
consensus_9666#1      ------------------------------------------------ATCGGCA-CGAG 11
consensus_9666#2      ------------------------------------------------------------
                                                                                  

consensus_9666#0      GCGCTACCGCTCACGACCACGATCGTTGACGTCGAGCGGGAAGTGGCCCGTCTGGGGGAA 720
consensus_9666#1      GCGCTATCGCTCACGACCACGATCGTTGACGTCGAGCGGGAAGTGGCCCGTCTGGGGGAA 71
consensus_9666#2      ------------------------------------------------------------
                                                                                  

consensus_9666#0      GGCACTGGAGCGGCAGCAGCAGCAGCAGCAGCAGAAGTACCACCACAGCAACATAGCAGT 780
consensus_9666#1      GGCACTGGAGCGGCAGCAGCAGCAGCAGCAGCAGAAGTACCACCACAGCAACATAGCAGT 131
consensus_9666#2      --------------------------------ACAAACACGGCCGTCCCGCTGTGGCCCT 28
                                                      * **  **  **    *    * **  *

consensus_9666#0      CTGCCCGCGTTGTCAGGGGT-AACGCCCGATATCGTTCATTCGGCGATGGGCAACGGGAC 839
consensus_9666#1      CTGCCCGCGTTGTCAGGGGTGAACGCCCGATATCGTTCATTCGGCGATGGGCAACGGGAC 191
consensus_9666#2      CTCCCTTTAGAGTATATCTTTATCAGCGAAAGTTGTTTGTA-AATGTTGTAATCCGGGGG 87
                      ** **      **      * * *  *  *  * ***  *     * **     ****  

consensus_9666#0      AGCGGCGCTGCCGGAAGACCAGATGCCCTACTTTTACGAGAACGGCGTACACTACGTGTA 899
consensus_9666#1      AGCGGCGCTGCCGGAAGACCAGATGCCCTACTTTTACNNNAACGGCGTACACTACGTGTA 251
consensus_9666#2      CGTTGTGTT--------------------------------------------------- 96
                       *  * * *                                                   

consensus_9666#0      CGATCTGTACGTGGCCGACGCGAGCCAGAATGTAACGCACATCCCGTACTACACCGACAA 959
consensus_9666#1      CGNTCTGTACGTGGCCGACGCGAGCCAGAATGTAACGCACATCCCGTACTACACCGACAA 311
consensus_9666#2      ------------------------------------------------------------
                                                                                  

consensus_9666#0      TCTGGACGATCTCAGCGTCATGGTGTGCGACGATCCACTGTACGCGTGCCACCGGGGTCT 1019
consensus_9666#1      TCTGGACGATCTCAGGTTGGTGCTGATAGAAGACGCGTACTTTGCATTCTACTCGTTCAT 371
consensus_9666#2      ------------------------------------------------------------
                                                                                  

consensus_9666#0      CGATTCGGACGATTCGAGCGACGCGGATTCGGAAGACTCGAACGCGGAGAACAACTGGCG 1079
consensus_9666#1      TTAAACGC-CGGGCCACACTGCGCACTGCCGGACAACACACACT-----ACCAACTANGA 425
consensus_9666#2      ------------------------------------------------------------
                                                                                  

consensus_9666#0      CAACGACTATCCGGACGAGGACGAGGA-CGGTCTGGCGGACGGTGCCAGTGTGGGCGAGG 1138
consensus_9666#1      CATAGTGTAATGNNCTAGGNAGNAGNNTCGGCTCGGCGCGTG-TGTGTGTGTGAGTGTGT 484
consensus_9666#2      ------------------------------------------------------------
                                                                                  

consensus_9666#0      ACGATATGGTGCGGGCGGTGGAGGATCTCGATTTAGATGGAGAACGGGAACTATCCTCGG 1198
consensus_9666#1      TCGTCACCACCACCACCATCA-----CCGGAGGGCGGGAGGGANTGGTGATTGTCNCAGG 539
consensus_9666#2      ------------------------------------------------------------
                                                                                  

consensus_9666#0      ACGAAGACTACGTGCGGTACGATGAGAATGAGGAGGACGGTTCGCTTATCCACGGCACGA 1258
consensus_9666#1      GCACAGTTTTGCTAGTACCAGGCGCTAACGCTTTTGTCCTTTCTATCTCTCGCTCTCTCT 599
consensus_9666#2      ------------------------------------------------------------
                                                                                  

consensus_9666#0      TGGGGTACTGTACACGGACGAGGAAGACGATTCGGACAGCGAGGCGGAGGGCATCAACCG 1318
consensus_9666#1      CTATCTCCCATTTTCCCCTCATTTACTGATTACTGATAGTTAGCTGTAAGA-ATNAGAAC 658
consensus_9666#2      ------------------------------------------------------------
                                                                                  

consensus_9666#0      GGAGGATGTGCGGCGGTACGGGACGGCCTATGCG-CGCTACAAGGCACGCATCTTGCGCG 1377
consensus_9666#1      AAAAGAAAAAGAACACAACGCCCCCGGNATTACAACATTTACAAACA---AACTTTCGCT 715
consensus_9666#2      ------------------------------------------------------------
                                                                                  

consensus_9666#0      AAGAGAAACGTGATCAAGCAGCGGGCAGTAGCAGCAGCAGCTCTAGCACGGAGGATTTGA 1437
consensus_9666#1      GATAAAANTAT------------------------------------------------- 726
consensus_9666#2      ------------------------------------------------------------
                                                                                  

consensus_9666#0      ATCTGTACGATTAAATGCCGTGCGTGTGTGAGTGCGTGTACGGTGGGAATGAAGGGTGGT 1497
consensus_9666#1      ------------------------------------------------------------
consensus_9666#2      ------------------------------------------------------------
                                                                                  

consensus_9666#0      AGTAACTCATGGTGACGTTGAGCGGGTGCTACTGGCCGGCGCCGCATAGTTTGTATGCTC 1557
consensus_9666#1      ------------------------------------------------------------
consensus_9666#2      ------------------------------------------------------------
                                                                                  

consensus_9666#0      GTGCCGGGGGAGGAAGAATCATGCTGTCCATCATAGTGCTAGCGTGCTCACTTTCCATTC 1617
consensus_9666#1      ------------------------------------------------------------
consensus_9666#2      ------------------------------------------------------------
                                                                                  

consensus_9666#0      AAACGATCGACAGTTCAGATCTCGTCGCTTATTCTCTGTAAATGTGCTGCATTTATTCCG 1677
consensus_9666#1      ------------------------------------------------------------
consensus_9666#2      ------------------------------------------------------------
                                                                                  

consensus_9666#0      TGTTCTCAAAATAAGAGAGTGATTCGTGTGTTTCCTATTTCTCTTGTAAAGACTAATGTG 1737
consensus_9666#1      ------------------------------------------------------------
consensus_9666#2      ------------------------------------------------------------
                                                                                  

consensus_9666#0      TCATGCATGTAAAATATAAATATTTCTCAACCCTTTACCTCAACAA 1783
consensus_9666#1      ----------------------------------------------
consensus_9666#2      ----------------------------------------------