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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9686#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1831 fasta sequence
[TGCGGGGATCTTAAATAAAACTCCC-TTTTGCTTACTATATTT-GCGTACAATAAAATACATTTCTTATCGATCAACTAAATTGGGTATACTTAATCCTTTCATCACTTAAAAATCGGCTCTCCGCCGTGCCTGGGGGTTAGCAGTAGAGTACCTACAACACACGCTAGTTGTTTGAAGCGGTTCGTTCCGTTCCTGCTGCTGCTCGTTTGATCTTCACAATCAGTAAACTATTAACAACAAATTAACTTAACAAAAATTGCAGGGAAAGGTTAAAGATATTCTGTTTCGAATGTTGCAGAGCCTAGCATTGCAGGGCAGGGATGTGTATGGAATAGTAACAAACGAAAAATTGCCGTA-GCTATCAAACTCGATCTCACAAATTACTGGAACTGGAAGCGGGGTTTCTGGGTTTATCTTTAGAATTTGCTTCAAACTATAGAAGAAAAAAATCGTTTGGCGCAATTTCGCATTAAGGGTCCTAATTATATGCTTGCTTGAAGAAGCACACACACACAGACACTTTGCCCTAACACGAAACGCAACTTGTAGTTTCGTTTCGAACGGTAGGTTCCTCCTTCACTCACTTCCCGCTCTGTGAAACGGGGTAAAAATCGTTGCCACTCACACACGCACCCGCGCCAACCCGGCAATGGAACTCCCGATGTACCTCCTAGCAGGAGCAATTTTCCTTGTTCGTCTGTGCATCGTTGCTGAGCGTGGTTCGGCCGGGTTGGGCCGGCTTATGCTGCACGCCCGTTTCGGACGAGTTCAGATCGAGCCGCCCGTCCTTGATGCTTTGGTAGATCTTTCGGGCCGTTTCTAGAAATGCTTCCTCCACGTTTTGGCCAGTCATTGCGCTCGCTTCCGCAAACAGCAGGCCATGCTCGTCGGCAAAGTTTTTCGCCTCCTCGTACGTCACCTCGCGGGTACTTTCGAGGTCCGATTTGTTGCCGATGAGAAATATCACAGTGCTGGGATTCGTTAGATTGCGCGTATCGGTCAGCCAGCTGGACAGGTGATTGTAGGTTGACCGTCGCGTAATGTCATAAACCAT-CAGTGCACCGGCAGCACCACGGTAGTACGATCGTGTCACCGCCCGGAACCGCTCCTGCCCGGCCGTGTCCCATATTTGCAGCTTAATTTTTTGCTTATCAACCTCGATGATGCGCGTCCCGAACTCGA-CACC-GATCGTATGCGGACAGCTGGCCATAAACTTCTTCTCTGTGAACTGATGCAGCAGGCAGCTTTTGCCGACTCCCATATCGCCGATTATGATGTACTTGAAGATATACGAATAATTATACGGTCCGGCCGACATGATGAATATCCTGTGATTTCAGCAGCCGTTTTTCACTTGATCAACAT-CCAATTTCTGGAGGGGG-GGAATGGAAGGTTCCGCTGAGCCAATGGTTCCAGCGGGTTGAAGAGATCTATT-CTTCGCCTGGTTCTTCCTGCAAACGGCACCACAAACAGGCACAACACAGCTGTACGTGTTTTTATTCGCTGCCTTCAAGAGAAA--CTCTCAATCACAGAAAAAGGCGTAATTACTCCTCCGTGTCAATGCATCCGCATCGGTGTGCAAAGGTGCTGACGGTTCGACGGATCGATCGAACTTTGCTAGTTTTGCTCCCGTTC-----CG----ATTGGCCGACCGGTGCGGGAAACTGAGAACGGGCGGTCAGCGATGTGCGTCACGGTATTTAGCAGGGATTTGCACTGTTTTGTCGCCTGCTTTTGTCCTTCCACCATACGTTTGCAAAATTTACAACATATTCCCGGACTGTATTGATGGTGTTTAGGGGGAGGGCAGGTCGATGGCCAAGGTAGGTAGAGCGG]
[+] EMBL CNS08X27 [TGCGGGGATCTTAAATAAAACTCCC TTTTGCTTACTATATTT GCGTACAATAAAATACATTTCTTATCGATCAACTAAATTGGGTATACTTAATCCTTTCATCACTTAAAAATCGGCTCTCCGCCGTGCCTGGGGGTTAGCAGTAGAGTACCTACAACACACGCTAGTTGTTTGAAGCGGTTCGTTCCGTTCCTGCTGCTGCTCGTTTGATCTTCACAATCAGTAAACTATTAACAACAAATTAACTTAACAAAAATTGCAGGGAAAGGTTAAAGATATTCTGTTTCGAATGTTGCAGAGCCTAGCATTGCAGGGCAGGGATGTGTATGGAATAGTAACAAACGAAAAATTGCCGTAGGCTATCAAACTCGATCTCACAAATTACTGGAACTGGAAGCGGGGTTTCTGGGTTTATCTTTAGAATTTGCTTCAAACTATAGAAGAAAAAAATCGTTTGGCGCAATTTCGCATTAAGGGTCCTAATTATATGCTTGCTTGAAGAAGCACACACACACAGACACTTTGCCCTAACACGAAACGCAACTTGTAGTTTCGTTTCGAACGGTAGGTTCCTCCTTCACTCACTTCCCGCTCTGTGAAACGGGGTAAAAATCGTTGCCACTCACACACGCACCCGCGCCAACCCGGCAATGGAACTCCCGATGTACCTCCTAGCAGGAGCAATTTTCCTTGTTCGTCTGTGCATCGTTGCTGAGCGTGGTTCGGCCGGGTTGGGCCGGCTTATGCTGCACGCCCGTTTCGGACGAGTTCAGATCGAGCCGCCCGTCCTTGATGCTTTGGTAGATCTTTCGGGCCGTTTCTAGAAATGCTTCCTCCACGTTTTGGCCAGTCATTGCGCTCGCTTCCGCAAACAGCAGGCCATGCTCGTCGGCAAAGTTTTTCGCCTCCTCGTACGTCACCTCGCGGGTACTTTCGAGGTCCGATTTGTT ]
[+] EMBL CNS08YW5 [ ACTCCCTTTTTGCTTACTATATTTCGCGTACAATAAAATACATTTCTTATCGATCAACTAAATTGGGTATACTTAATCCTTTCATCACTTAAAAATCGGCTCTCCGCCGTGCCTGGGGGTTAGCAGTAGAGTACCTACAACACACGCTAGTTGTTTGAAGCGGTTCGTTCCGTTCCTGCTGCTGCTCGTTTGATCTTCACAATCAGTAAACTATTAACAACAAATTAACTTAACAAAAATTGCAGGGAAAGGTTAAAGATATTCTGTTTCGAATGTTGCAGAGCCTAGCATTGCAGGGCAGGGATGTGTATGGAATAGTAACAAACGAAAAATTGCCGTA GCTATCAAACTCGATCTCACAAATTACTGGAACTGGAAGCGGGGTTTCTGGGTTTATCTTTAGAATTTGCTTCAAACTATAGAAGAAAAAAATCGTTTGGCGCAATTTCGCATTAAGGGTCCTAATTATATGCTTGCTTGAAGAAGCACACACACACAGACACTTTGCCCTAACACGAAACGCAACTTGTAGTTTCGTTTCGAACGGTAGGTTCCTCCTTCACTCACTTCCCGCTCTGTGAAACGGGGTAAAAATCGTTGCCACTCACACACGCACCCGCGCCAACCCGGCAATGGAACTCCCGATGTACCTCCTAGCAGGAGCAATTTTCCTTGTTCGTCTGTGCATCGTTGCTGAGCGTGGTTCGGCCGGGTTGGGCCGGCTTATGCTGCACGCCCGTTTCGGACGAGTTCAGATCGAGCCGCCCGTCCTTGATGCTTTGGTAGATCTTTCGGGCCGTTTCTAGAAATGCTTCCTCCACGTTTTGGCCAGTCATTGCGCTCGCTTCCGCAAACAGCAGGCCATGCTCGTCGGCAAAGTTTTTCGCCTCCTCGTACGTCACCTCGCGGGTACTTTCGAGGTCCGATTTGTTGCCGATGAGAAATATCACAGTGCTGGGATTCGT ]
[-] EMBL BX615452 [ AAAAATCGTTTGGCGCAATTTCGCATTAAGGGTCCTAATTATATGCTTGCTTGAAGAAGCACACACACACAGACACTTTGCCCTAACACGAAACGCAACTTGTAGTTTCGTTTCGAACGGTAGGTTCCTCCTTCACTCACTTCCCGCTCTGTGAAACGGGGTAAAAATCGTTGCCACTCACACACGCACCCGCGCCAACCCGGGAATGGAACTCCCGATGTACCTCCTAGCAGGAGCAATTTTCCTTGTTCGTCTGTGCATCGTTGCTGAGCGTGGTTCGGCCGGGTTGGGCCGGCTTATGCTGCACGCCCGTTTCGGACGAGTTCAGATCGAGCCGCCCGTCCTTGATGCTTTGGTAGATCTTTCGGGCCGTTTCTAGAAATGCTTCCTCCACGTTTTGGCCAGTCATTGCGCTCGCTTCCGCAAACAGCAGGCCATGCTCGTCGGCAAAGTTTTTCGCCTCCTCGTACGTCACCTCGCGGGTACTTTCGAGGTCCGATTTGTTGCCGATGAGAAATATCACAGTGCTGGGATTCGTTAGATTGCGCGTATCGGTCAGCCAGCTGGACAGGTGATTGTAGGTTGACCGTCGCGTAATGTCATAAACCAT CAGTGCACCGGCAGCACCAC ]
[+] EMBL CNS08H1Y [ CTTGAAGAAGCACACACACACAGACACTTTGCCCTAACACGAAACGCAACTTGTAGTTTCGTTTCGAACGGTAGGTTCCTCCTTCACTCATTTCCCGCTCTGTGAAA GGGGTAAAAATCGTTGCCACACACACACGCACCCGCGCCAACCCGGCAATGGAACTCCCGATGTACCTCCTAGCAGGAGCAATTTTCCTTGTTCGTCTGTGCATCGTTGCTGAGCGTGGTTCGGCCGGGTTGGG CGGCTTATGCTGCACGCCCGTTTCGGACGAGTCCAGATCGAGCCGCCCGTCCTTGATGCTTTGGTAGATCTTTCGGGCCGTTTCTAGAAATGCTTCCTCCACGTTTTGGCCAGTTATTGCGCTCGCTTCCGCAAACAGCAGGCCATGCTCGTCGGCAAAATTTTTCGCCTC ]
[+] EMBL CNS08N3H [ AGAAG ACACACACACAGACACTTTGCCCTAACACGAAACGCAACTTGTAGTTTCGTTTCGAACGGTAGGTTCCTCCTTCACTCACTTCCCGCTCTGTGAAACGGGGTAAAAATCGTTGCCACACACACACGCACCCGCGCCAACCCGGCAATGGAACTCCCGATGTACCTCCTAGCAGGAGCAATTTTCCTTGTTCGTCTGTTCATCGTTGCTGAGCGTGGTTCGGCCGGGTTGGGCCGGCTTATGCTGCACGCCCGTTTCGGACGAGTTCAGATCGAGCCGCCCGTCCTTGATGCTTTGGTAGATCTTTCGGGCCGTTTCTAGAAATGCTTCCTCCACGTTTTGGCCAGTCATTGCGCTCGCTTCCGCAATTTTTTGGCCATGCTCGGCGGCAAAATTTTTCGCCTCCTC ]
[-] EMBL AL694387 [ GCAATGGAACTCCCGATGTACCTCCTAGCAGGAGCAATTTTCCTTGTTCGTCTGTGCATCGTTGCTGAGCGTGGTTCGGCCGGGTTGGGCCGGCTTATGCTGCACGCCCGTTTCGGACGAGTTCAGATCGAGCCGCCCGTCCTTGATGCTTTGGTAGATCTTTCGGGCCGTTTCTAGAAATGCTTCCTCCACGTTTTGGCCAGTCATTGCGCTCGCTTCCGCAAACAGCAGGCCATGCTCGTCGGCAAAGTTTTTCGCCTCCTCGTACGTCACCTCGCGGGTACTTTCGAGGTCCGATTTGTTGCCGATGAGAAATATCACAGTGCTGGGATTCGTTAGATTGCGCGTATC GTCAGCCAGCT GACA GTGATTGTA GTAAACC TCGgggat ]
[-] EMBL CNS08X26 [ CGCCCGTCCTTGATGCTTTGGTAGATCTTTCGGGCCGTTTCTAGAAATGCTTCCTCCACGTTTTGGCCAGTCATTGCGCTCG TTCCGCAAACAGCAGGCCATGCTCGTCGGCAAAGTTTTTCGCCTCCTCGTACGTCACCTCGCGGGTACTTTCGAGGTCCGATTTGTTGCCGATGAGAAATATCACAGTGCTGGGATTCGTTAGATTGCGCGTATCGGTCAGCCAGCTGGACAGGTGATTGTAGGTTGACCGTCGCGTAATGTCATAAACCAT CAGTGCACCGGCAGCACCACGGTAGTACGATCGTGTCACCGCCCGGAACCGCTCCTGCCCGGCCGTGTCCCATATTTGCAGCTTAATTTTTTGCTTATCAACCTCGATGATGCGCGTCCCGAACTCGA CACC GATCGTATGCGGACAGCTGGCCATAAACTTCTTCTCTGTGAACTGATGCAGCAGGCAGCTTTTGCCGACTCCCATATCGCCGATTATGATGTACTTGAAGATATACGAATAATTATACGGTCCGGCCGACATGATGAATATCCTGTGATTTCAGCAGCCGTTTTTCACTTGATCAACAT CCAATTTCTGGAGGGGG GGAATGGAAGGTTCCGCTGAGCCAATGGTTCCAGCGGGTTGAAGAGATCTATT GTTCGCCTGGTTCTTCCTGCAAACGGCACCACAAACAGGCACAACACAGCTGTACGTGTTTTTATTCGCTGCCTTCAAGAGAAA CTCTCAATCACAGAAAAAGGCGTAATTACTCCTCCGTGTCAATGCATCCGCATCGGTGTGCAAAGGTGCTGACGGTTCGACGGATCGATCGAACTTTGCTAGTTTTGCTCCCGTTC CG ATTGGCCGACCGGTGCGGGAAACTGAGAACGGGCGGTCAGCGATGTGCGTCACGGTATTTAGCAGGGATTTGCACTGTTTAGTCGCCTGCTTTTGTCCTTCCcc ]
[-] EMBL CNS08YW4 [ GGCCGTTTCTAGAAATGCTTCCTCCACGTTTTGGCCAGTCATTGCGCTCGCTTCCGCAAACAGCAGGCCATGCTCGTCGGCAAAGTTTTTCGCCTCCTCGTACGTCACCTCGCGGGTACTTTCGAGGTCCGATTTGTTGCCGATGAGAAATATCACAGTGCTGGGATTCGTTAGATTGCGCGTATCGGTCAGCCAGCTGGACAGGTGATTGTAGGTTGACCGTCGCGTAATGTCATAAACCAT CAGTGCACCGGCAGCACCACGGTAGTACGATCGTGTCACCGCCCGGAACCGCTCCTGCCCGGCCGTGTCCCATATTTGCAGCTTAATTTTTTGCTTATCAACCTCGATGATGCGCGTCCCGAACTCGA CACC GATCGTATGCGGACAGCTGGCCATAAACTTCTTCTCTGTGAACTGATGCAGCAGGCAGCTTTTGCCGACTCCCATATCGCCGATTATGATGTACTTGAAGATATACGAATAATTATACGGTCCGGCCGACATGATGAATATCCTGTGATTTCAGCAGCCGTTTTTCACTTGATCAACAT CCAATTTCTGGAGGGGG GGAATGGAAGGTTCCGCTGAGCCAATGGTTCCAGCGGGTTGAAGAGATCTATT CTTCGCCTGGTTCTTCCTGCAAACGGCACCACAAACAGGCACAACACAGCTGTACGTGTTTTTATTCGCTGCCTTCAAGAGAAA CTCTCAATCACAGAAAAAGGCGTAATTACTCCTCCGTGTCAATGCATCCGCATCGGTGTGCAAAGGTGCTGACGGTTCGACGGATCGATCGAACTTTGCTAGTTTTGCTCCCGTTC CG ATTGGCCGACCGGTGCGGGAAACTGAGAACGGGCGGTCAGCGATGTGCGTCACGGTATTTAGCAGGGATTTGCACTGTTTTATCGCCTGCTTTT TCCTTCC ]
[-] EMBL BM597904 [ GCTGGGATTCGTTAGATTGCGCGTATCGGTCAGCCAGCTGGACAGGTGATTGTAGGTTGACCGTCGCGTAATGTCATAAACCAT CAGTGCACCGGCAGCACCACGGTAGTACGATCGTGTCACCGCCCGGAACCGCTCCTGCCCGGCCGTGTCCCATATTTGCAGCTTAATTTTTTGCTTATCAACCTCGATGATGCGCGTCCCGAACTCGA CACC GATCGTATGCGGACAGCTGGCCATAAACTTCTTCTCTGTGAACTGATGCAGCAGGCAGCTTTTGCCGACTCCCATATCGCCGATTATGATGTACTTGAAGATATACGAATAATTATACGGTCCGGCCGACATGATGAATATCCTGTGATTTCAGCAGCCGTTTTTCACTTGATCAACAT CCAATTTCTGGAGGGGG GGAATGGAAGGTTCCGCTGAGCCAATGGTTCCAGCGGGTTGAAGAGATCTATTGCTTCGCCTGGTTCTTCCTGCAAACGGCACCACAAACAGGCACAACACAGCTGTACGTGTTTTTATTCGCTGCCTTCAAGAGAAA CTCTCAATCACAGAAAAAGGCGTAATTACTCCTCCGTGTCAATGCATCCGCATCGGTGTGCAAAGGTGCTGACGGTTCGACGGATCGATCGAACTTTGCTAGTTTTGCTCCCGTTC CG ATTGGCCGACCGGTGCGcgg ]
[-] EMBL BM579247 [ GCGTATCGGTCAGCCAGCTGGACAGGTGATTGTAGGTTGACCGTCGCGTAATGTCATAAACCATCCAGTGCACCGGCAGCACCACGGTAGTACGATCGTGTCACCGCCCGGAACCGCTCCTGCCCGGCCGTGTCCCATATTTGCAGCTTAATTTTTTGCTTATCAACCTCGATGATGCGCGTCCCGAACTCGA CACCGGATCGTATGCGGACAGCTGGCCATAAACTTCTTCTCTGTGAACTGATGCAGCAGGCAGCTTTTGCCGACTCCCATATCGCCGATTATGATGTACTTGAAGATATACGAATAATTATACGGTCCGGCCGACATGATGAATATCCTGTGATTTCAGCAGCCGTTTTTCACTTGATCAACAT CCAATTTCTGGAGGGGG GGAATGGAAGGTTCCGCTGAGCCAATGGTTCCAGCGGGTTGAAGAGATCTATTGCTTCGCCTGGTTCTTCCTGCAAACGGCACCACAAACAGGCACAACACAGCTGTACGTGTTTTTATTCGCTGCCTTCAAGAGAAA CTCTCAATCACAGAAAAAGGCGTAATTACTCCTCCGTGTCAATGCATCCGCATCGGTGTGCAAAGGTGCTGACGGTTCGACGGATCGATCGAACTTTGCTAGTTTTGCTCCCGTTC CG ATTGGCCGACCGGTGCGGGAAACTGAGAACGGGCGGTCAGCGATGcgg ]
[-] EMBL CNS08N3G [ TAAACCAT CAGTGCACCGGCAGCACCACGGTAGTACGATCGTGTCACCGCCCGGAACCGCTCCTGCCCGGCCGTGTCCCATATTTGCAGCTTAATTTTTTGCTTATCAACCTCGATGATGCGCGTCCCGAACTCGA CACC GATCGTATGCGGACAGCTGGCCATAAACTTCTTCTCTGTGAACTGATGCAGCAGGCAGCTTTTGCCGACTCCCATATCGCCGATTATGATGTACTTGAAGATATACGAATAATTATACGGTCCGGCCGACATGATGAATATCCTGTGATTTCAGCAGCCGTTTTTCACTTGATCAACATCCCAATTTCTAGAGGGGG GGAATGAAAGGTTCCGCTGAGCCAATGGTTCCAGCGGGTTGAAGAGATCTATT GTTCGCCTGGTTCTTCCTGCAAACGCCACCACAAACAGGCACAACACAGCTGTACGTGTTTTTATTCGCTGCCTCCAAGAGAAACTCTCTCAATCACAGAAAAAGGCGTAATTACTCCTCCGTGTCAATGCATCCGCATCGGTGTGCAAAGGTGCTGACGGTTCGACGGATCGATCGAACTTTGCTAGTTTTGCTCCCGTTCCCGTTCGTTATATTGGCCGACTGGTACGGGAAACTGAGAACGGGCGGTCAGCGATGTGCGTCACGGTATTTAGCAGGGATTTGCACTGTTTTGTCGCCTGCTTTTGTCCTTCCACCATACGT ]
[-] EMBL BM620027 [ CGTGTCCCATATTTGCAGCTTAATTTTTTGCTTATCAACCTCGATGATGCGCGTCCCGAACTCGA CACC GATCGTATGCGGACAGCTGGCCATAAACTTCTTCTCTGTGAACTGATGCAGCAGGCAGCTTTTGCCGACTCCCATATCGCCGATTATGATGTACTTGAAGATATACGAATAATTATACGGTCCGGCCGACATGATGAATATCCTGTGATTTCAGCAGCCGTTTTTCACTTGATCAACAT CCAATTTCTGGAGGGGGAGGAATGGAAGGTTCCGCTGAGCCAATGGTTCCAGCGGGTTGAAGAGATCTATTGCTTCGCTTGGTTCTTCCTGCAAACGGCACCACAAACAGGCACAACACAGCTGTACGTGTTTTTATTTGCTGCCTCCAAGAGAAACTCTCTCAATCACAGAAAAAGGCGTAATTACTCCTCCGTGTCAATGCATCCGCATCGGTGTGCAAAGGTGCTGACGGTTCGACGGATCGATCGAACTTTGCTAGTTTTGCTCCCGTTC CG ATTGGCCGACTGGTGCGGGAAACTGAGAACGGGCGGTCAGCGATGTGCGTCACGGTATTTAGCAGGGATTTGCACTGTTTTGTCGCCTGCTTTTGTCCTTCCACCATACGTTTGCAAAATTTACAACATATTCCCGG ]
[-] EMBL CNS08H1X [ GTCCCGGACTCGA CACC GATCGTATGCGGACAGCTGGCCATAAACTTCTTCTCTGTGAACTGATGCAGCAGGCAGCTTTTGCCGACTCCCATATCGCCGATTATGATGTACTTGAAGATATACGAATAATTATACGGTCCGGCCGACATGATGAATATCCTGTGATTTCAGCAGCCGTTTTTCACTTGATCAACAT CCAATTTCTAGAGGAGG GGAATGGAAGGTTCCGCTGAGCCAATGGTTCCAGCGGGTTGAAGAGATCTATT CTTCGCCTGGTTCTTCCTGCAAACGCCACCACAAACAGGCACAACACAGCTGTACGTGTTTTTATTCGCTGCCTCCAAGAGAAACTCTCTCAATCACAGAAAAAGGCGTAATTACTCCTCCGTGTCAATGCATCCGCATCGGTGTGCAAAGGTGCTGACGGTTCGACGGATCGATCGAACTTTGCTAGTTTTGCTCCCGTTCCCGTTCGTTATATTGGCCGACTGGTACGGGAAACTGAGAACGGGCGGTCAGCGATGTGCGTCACGGTATTTAGCAGGGATTTGCACTGTTTTGTCGCCTGCTT ]
[-] EMBL BM612804 [ CCCGAACTCGACCCCC GATCGTATGCGGACAGCTGGCCATAAACTTCTTCTCTGTGAACTGATGCAGCAGGCAGCTTTTGCCGACTCCCATATCGCCGATTATGATGTACTTGAAGATATACGAATAATTATACGGTCCGGCCGACATGATGAATATCCTGTGATTTCAGCAGCCGTTTTTCACTTGATCAACAT CCAATTTCTGGAGGGGG GGAATGGAAGGTTCCGCTGAGCCAATGGTTCCAGCGGGTTGAAGAGATCTATTGCTTAGCCTGGTTCTTCCTCCAAACGCCACCACAAACAGGCACAACACAGCTGTACGTGTTTTTATTCGCTGCCTCCAAGAGAAACTCTCTCAATCACAGAAAAAGGCGTAATTACTCCTCCGTGTCAATGCATCCGCATCGGTGTGCAAAGGTGCTGACGGTTCGACGGATCGATCGAACTTTGCTAGTTTTGCTCCCGTTC CG ATTGGCCGACTGGTGCGGGAAACTGAGAACGGGCGGTCAGCGATGTGCGTCACGGTATTTAGCAGGGATTTGCACTGTTTTGTCGCCTGCTTTTGTCCTTCCACCATACGTTTGCAAAATTTACAACATATTCCAACACTGTATTGATGGTGTTTAGGGGGAGGGCAGGTCGATGGCCAAGGTAGGTAGAGCGG]
[-] EMBL BM656268 [ CCCGAACTCGA CACC GATCGTATGCGGACAGCTGGCCATAAACTTCTTCTCTGTGAACTGATGCAGCAGGCAGCTTTTGCCGACTCCCATATCGCCGATTATGATGTACTTGAAGATATACGAATAATTATACGGTCCGGCCGACATGATGAATATCCTGTGATTTCAGCAGCCGTTTTTCACTTGATCAACAT CCAATTTCTGGAGGGGG GGAATGGAAGGTTCCGCTGAGCCAATGGTTCCAGCGGGTTGAAGAGATCTATTGCTTCGCCTGGTTCTTCCTGCAAACGGCACCACAAACAGGCACAACACAGCTGTACGTGTTTTTATTCGCTGCCTTCAAGAGAAA CTCTCAATCACAGAAAAAGGCGTAATTACTCCTCCGTGTCAATGCATCCGCATCGGTGTGCAAAGGTGCTGACGGTTCGACGGATCGATCGAACTTTGCTAGTTTTGCTCCCGTTC CG ATTGGCCGACCGGTGCGGGAAACTGAGAACGGGCGGTCAGCGATGTGCGTCACGGTATTTAGCAGGGATTTGCACTGTTTTGTCGCCTGCTTTTGTCCTTCCACCATACGTTTGCAAAATTTACcgg ]
[-] EMBL BM580296 [ ACAGCTGTACGTGTTTTTATTGGCTGCCTTCAAGAGAAA CTCTCAATCACAGAAAAAGGCGTAATTACTCCTCCGTGTCAATGCATCCGCATCGGTGTGCAAAGGTGCTGACGGTTCGACGGATCGATCGAACTTTGCTAGTTTTGCTCCCGTTC CG ATTGGCCGACCGGTGCGGGAAACTGAGAACGGGCGGTCAGCGATGcgg ]
consensusID : consensus_9686#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 674 fasta sequence
[CTNCGACTCCCCGAGTCGGTAGGGCCGGACCAGGCTGNGCCANGNNACTACATNNCCTCTGGTGANTCTGATGCCAGCAGNGCTGGCTTCTNTGCCGAGCTCCCGCATATCGCCGATTNACTGATGGTACCTTCGAAGAGTATAGCGAATAATTACGTGACGGTGCCGGCCNGACCACTGATGATATATCCCTGCTGACTCTTCAGGCAGCCGTATTNTGTCACCTTGACTCAACACTCCAATTTCCTGGAGGNNGGAGGGAATGCGAAGGTATCCGACTGAGCCAATGGTTCCAGCGGGTTGAAGAGATCTATTGCTTCGCCTGGTTCTTCCTGCAAACGGCACCACAAACAGGCACAACACAGCCTGTACGTGTTTTTATTCGCTGCCTTCATAGAGAATACTCTCAATCACAGAAAAAGGCGTAATTACTCCTCCGTGTCAATGCATCCGCATCGGTGTGCAAAGGTGCTGACGGTTCGACGGATCGTATCGAACTTTGCTAGATTTTGCTCCCGTTCCGATTGGCCGACCGGTGCGGGAAACTGAGAACGGGCGGTCAGCGATGTGCGTCACGGTATTTAGCAGGGATTTGCACTGTTTTGTCGCCTGCTTTTGTCCTTGCCACCATACGTTTGCAAATTAACCTCGGGCGATTCGTGCNTGAGCATGGG]
[-] EMBL AL934639 [CTNCGACTCCCCGAGTCGGTAGGGCCGGACCAGGCTGNGCCANGNNACTACATNNCCTCTGGTGANTCTGATGCCAGCAGNGCTGGCTTCTNTGCCGAGCTCCCGCATATCGCCGATTNACTGATGGTACCTTCGAAGAGTATAGCGAATAATTACGTGACGGTGCCGGCCNGACCACTGATGATATATCCCTGCTGACTCTTCAGGCAGCCGTATTNTGTCACCTTGACTCAACACTCCAATTTCCTGGAGGNNGGAGGGAATGCGAAGGTATCCGACTGAGCCAATGGTTCCAGCGGGTTGAAGAGATCTATTGCTTCGCCTGGTTCTTCCTGCAAACGGCACCACAAACAGGCACAACACAGCCTGTACGTGTTTTTATTCGCTGCCTTCATAGAGAATACTCTCAATCACAGAAAAAGGCGTAATTACTCCTCCGTGTCAATGCATCCGCATCGGTGTGCAAAGGTGCTGACGGTTCGACGGATCGTATCGAACTTTGCTAGATTTTGCTCCCGTTCCGATTGGCCGACCGGTGCGGGAAACTGAGAACGGGCGGTCAGCGATGTGCGTCACGGTATTTAGCAGGGATTTGCACTGTTTTGTCGCCTGCTTTTGTCCTTGCCACCATACGTTTGCAAATTAACCTCGGGCGATTCGTGCNTGAGCATGGG]
consensusID : consensus_9686#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 637 fasta sequence
[TTCGCCTCCTCGTACGTCACCTCGCGGGTACTTTCGAGGTCCGATTTGTTGCCGATGAGAAATATCACAGTGCTGGGATTCGTTAGATTGCGCGTATCGGTCAGCCAGCTGGACAGGTGATTGTAGGTTGACCGTCGCGTAATGTCATAAACCATCAGTGCACCGGCAGCACCACGGTAGTAGGATCGTGTCACCGCCCGGAACCGCTCCTGCCCGGCCGTGTCCCATATTTGCAGCTTAATTTTTTGCTTATCAACCTCGATGATGCGCGTCCCGAACTCGACACCGATCGTATGCGGACAGCTGGCCATAAACTTCTTCTCTGTGAACTGATGCAGCAGGCAGCTTTTGCCGACTCCCATATCGCCGATTATGATGTACTTGAAGATATACGAATAATTATACGGTCCGGCCGACATGATGAATAGCGGTAGTTAATTGCAGCTTTCTATTGGGCAGTAGAAGTATTTTTCTGTGTGAAAATATTCACACCGTTTGTTGTTTTTCTTGCTTCATTCTCCGCCCACCTCCACCCCTCACATTTTCCTTTGCACAAAACTGCACACAGTGACTTTCTTCAAGGCCACAGGCGAAACAACAACAACAAATAACGATTTTATCGACATGAGTAATTCAA]
[-] EMBL BM648355 [TTCGCCTCCTCGTACGTCACCTCGCGGGTACTTTCGAGGTCCGATTTGTTGCCGATGAGAAATATCACAGTGCTGGGATTCGTTAGATTGCGCGTATCGGTCAGCCAGCTGGACAGGTGATTGTAGGTTGACCGTCGCGTAATGTCATAAACCATCAGTGCACCGGCAGCACCACGGTAGTAGGATCGTGTCACCGCCCGGAACCGCTCCTGCCCGGCCGTGTCCCATATTTGCAGCTTAATTTTTTGCTTATCAACCTCGATGATGCGCGTCCCGAACTCGACACCGATCGTATGCGGACAGCTGGCCATAAACTTCTTCTCTGTGAACTGATGCAGCAGGCAGCTTTTGCCGACTCCCATATCGCCGATTATGATGTACTTGAAGATATACGAATAATTATACGGTCCGGCCGACATGATGAATAGCGGTAGTTAATTGCAGCTTTCTATTGGGCAGTAGAAGTATTTTTCTGTGTGAAAATATTCACACCGTTTGTTGTTTTTCTTGCTTCATTCTCCGCCCACCTCCACCCCTCACATTTTCCTTTGCACAAAACTGCACACAGTGACTTTCTTCAAGGCCACAGGCGAAACAACAACAACAAATAACGATTTTATCGACATGAGTAATTCAA]
consensusID : consensus_9686#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 233 fasta sequence
[AATTCCGGTGTGCCAAACGNGTCNCTNCGACCGGTTACGACCGGACTCGATCGAACCTTTGCTAGTTTTGCTCCNNGTTCCGACTTGGCCGACCCGGTGCGGGAAACTGAGAACGGGCGGTCAGCGATGTGCGTCACGGTATTTAGNCAGGGATTTGCACCTGTTTTGTCGCCTGCTTTTGTCCTTCCACGATACGCTTTGCAAAATTACCTAAACGTGCCANGGTCTTGGCC]
[-] EMBL BX468296 [AATTCCGGTGTGCCAAACGNGTCNCTNCGACCGGTTACGACCGGACTCGATCGAACCTTTGCTAGTTTTGCTCCNNGTTCCGACTTGGCCGACCCGGTGCGGGAAACTGAGAACGGGCGGTCAGCGATGTGCGTCACGGTATTTAGNCAGGGATTTGCACCTGTTTTGTCGCCTGCTTTTGTCCTTCCACGATACGCTTTGCAAAATTACCTAAACGTGCCANGGTCTTGGCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9686#1 ------------------------------------------------------------
consensus_9686#3 ------------------------------------------------------------
consensus_9686#0 TGCGGGGATCTTAAATAAAACTCCCTTTTGCTTACTATATTTGCGTACAATAAAATACAT 60
consensus_9686#2 ------------------------------------------------------------
consensus_9686#1 ------------------------------------------------------------
consensus_9686#3 ------------------------------------------------------------
consensus_9686#0 TTCTTATCGATCAACTAAATTGGGTATACTTAATCCTTTCATCACTTAAAAATCGGCTCT 120
consensus_9686#2 ------------------------------------------------------------
consensus_9686#1 ------------------------------------------------------------
consensus_9686#3 ------------------------------------------------------------
consensus_9686#0 CCGCCGTGCCTGGGGGTTAGCAGTAGAGTACCTACAACACACGCTAGTTGTTTGAAGCGG 180
consensus_9686#2 ------------------------------------------------------------
consensus_9686#1 ------------------------------------------------------------
consensus_9686#3 ------------------------------------------------------------
consensus_9686#0 TTCGTTCCGTTCCTGCTGCTGCTCGTTTGATCTTCACAATCAGTAAACTATTAACAACAA 240
consensus_9686#2 ------------------------------------------------------------
consensus_9686#1 ------------------------------------------------------------
consensus_9686#3 ------------------------------------------------------------
consensus_9686#0 ATTAACTTAACAAAAATTGCAGGGAAAGGTTAAAGATATTCTGTTTCGAATGTTGCAGAG 300
consensus_9686#2 ------------------------------------------------------------
consensus_9686#1 ------------------------------------------------------------
consensus_9686#3 ------------------------------------------------------------
consensus_9686#0 CCTAGCATTGCAGGGCAGGGATGTGTATGGAATAGTAACAAACGAAAAATTGCCGTAGCT 360
consensus_9686#2 ------------------------------------------------------------
consensus_9686#1 ------------------------------------------------------------
consensus_9686#3 ------------------------------------------------------------
consensus_9686#0 ATCAAACTCGATCTCACAAATTACTGGAACTGGAAGCGGGGTTTCTGGGTTTATCTTTAG 420
consensus_9686#2 ------------------------------------------------------------
consensus_9686#1 ------------------------------------------------------------
consensus_9686#3 ------------------------------------------------------------
consensus_9686#0 AATTTGCTTCAAACTATAGAAGAAAAAAATCGTTTGGCGCAATTTCGCATTAAGGGTCCT 480
consensus_9686#2 ------------------------------------------------------------
consensus_9686#1 ------------------------------------------------------------
consensus_9686#3 ------------------------------------------------------------
consensus_9686#0 AATTATATGCTTGCTTGAAGAAGCACACACACACAGACACTTTGCCCTAACACGAAACGC 540
consensus_9686#2 ------------------------------------------------------------
consensus_9686#1 ------------------------------------------------------------
consensus_9686#3 ------------------------------------------------------------
consensus_9686#0 AACTTGTAGTTTCGTTTCGAACGGTAGGTTCCTCCTTCACTCACTTCCCGCTCTGTGAAA 600
consensus_9686#2 ------------------------------------------------------------
consensus_9686#1 ------------------------------------------------------------
consensus_9686#3 ------------------------------------------------------------
consensus_9686#0 CGGGGTAAAAATCGTTGCCACTCACACACGCACCCGCGCCAACCCGGCAATGGAACTCCC 660
consensus_9686#2 ------------------------------------------------------------
consensus_9686#1 ------------------------------------------------------------
consensus_9686#3 ------------------------------------------------------------
consensus_9686#0 GATGTACCTCCTAGCAGGAGCAATTTTCCTTGTTCGTCTGTGCATCGTTGCTGAGCGTGG 720
consensus_9686#2 ------------------------------------------------------------
consensus_9686#1 ------------------------------------------------------------
consensus_9686#3 ------------------------------------------------------------
consensus_9686#0 TTCGGCCGGGTTGGGCCGGCTTATGCTGCACGCCCGTTTCGGACGAGTTCAGATCGAGCC 780
consensus_9686#2 ------------------------------------------------------------
consensus_9686#1 ------------------------------------------------------------
consensus_9686#3 ------------------------------------------------------------
consensus_9686#0 GCCCGTCCTTGATGCTTTGGTAGATCTTTCGGGCCGTTTCTAGAAATGCTTCCTCCACGT 840
consensus_9686#2 ------------------------------------------------------------
consensus_9686#1 ------------------------------------------------------------
consensus_9686#3 ------------------------------------------------------------
consensus_9686#0 TTTGGCCAGTCATTGCGCTCGCTTCCGCAAACAGCAGGCCATGCTCGTCGGCAAAGTTTT 900
consensus_9686#2 ------------------------------------------------------------
consensus_9686#1 ------------------------------------------------------------
consensus_9686#3 ------------------------------------------------------------
consensus_9686#0 TCGCCTCCTCGTACGTCACCTCGCGGGTACTTTCGAGGTCCGATTTGTTGCCGATGAGAA 960
consensus_9686#2 ------------------------------------------------------------
consensus_9686#1 ------------------------------------------------------------
consensus_9686#3 ------------------------------------------------------------
consensus_9686#0 ATATCACAGTGCTGGGATTCGTTAGATTGCGCGTATCGGTCAGCCAGCTGGACAGGTGAT 1020
consensus_9686#2 ------------------------------------------------------------
consensus_9686#1 ------------------------------------------------------------
consensus_9686#3 ------------------------------------------------------------
consensus_9686#0 TGTAGGTTGACCGTCGCGTAATGTCATAAACCATCAGTGCACCGGCAGCACCACGGTAGT 1080
consensus_9686#2 ------------------------------------------------------------
consensus_9686#1 ---------------------------------CTNCGACTCCCCGAGTCGGTAGGGCCG 27
consensus_9686#3 ------------------------------------------------------------
consensus_9686#0 ACGATCGTGTCACCGCCCGGAACCGCTCCTGCCCGGCCGTGTCCCATATTTGCAGCTTAA 1140
consensus_9686#2 ------------------------------------------------------------
consensus_9686#1 GACCAGGCTGNGCCANGNNACTACATNNCCTCTGG----TGANTCTGATGCCAGCAGNGC 83
consensus_9686#3 ------------------------------------------------------------
consensus_9686#0 TTTTTTGCTTATCAACCTCGATGATGCGCGTCCCGAACTCGACACCGATCGTATGCGGAC 1200
consensus_9686#2 --------------------------------------TTCGCCTCCTCGTACGTCACCT 22
consensus_9686#1 TGGCTTCTNTGCCGAGCTCCCGCATATCGCCGATTNACTGATGGTACCTTCGAAGAGTAT 143
consensus_9686#3 ------------------------------------------------------------
consensus_9686#0 AGCTGGCCATAAACTTCTTCTCTGTGAACTGATGCAGCAGGCAGCTTTTGCCGACTCCCA 1260
consensus_9686#2 CGCGGGTACTTTCGAGGTCCGATTTGTTGCCGATGAGAAATATCACAGTGCTGGGATTCG 82
consensus_9686#1 AGCGAATAATTACGTGACGGTGCCGGCCNGACCACTGATGATATATCCCTGCTGACTCTT 203
consensus_9686#3 ------------------------------------------------------------
consensus_9686#0 TATCGCCGATTATGATGTACTTGAAGATATACGAATAATTATACGGTCCGGCCGACATGA 1320
consensus_9686#2 TTAGATTGCGCGTATCGGTCAGCCAGCTGGACAGGTGATTGTAGGTT--GACCGTCGCGT 140
consensus_9686#1 CAGGCAGCC---GTATTNTGTCACCTTGACTCAACACTCCAATTTCCTGGAGGNNGGAGG 260
consensus_9686#3 ------------------------------------------------------------
consensus_9686#0 TGAATATCCTGTGATTTCAGCAGCCGTTTTTCACTTGATCAACATCCAATTTCTGGAGGG 1380
consensus_9686#2 AATGTCATAAACCATCAGTGCACCGGCAGCACCACGGTAGTAGGATCGTGTCACCGCCCG 200
consensus_9686#1 GAATGCGAAGGTATCCGACTGAGCCAATGGTTCCAGCGGGTTGAAGAGATCTATTGCTTC 320
consensus_9686#3 ------------------------------------------------------------
consensus_9686#0 GGGGAATGGAAGGTTCCGCTGAGCCAATGGTTCCAGCGGGTTGAAGAGATCTATT-CTTC 1439
consensus_9686#2 GAACCGCTCCTGCCCGGCCGTGTCCCATATTTGCAGCTTAATTTTTTGCTTATCAACCTC 260
consensus_9686#1 GCCTG-GTTCTTCCTGCAAACGGCACCACAAACAGGCACAACACAGCCTGTACGTGTTTT 379
consensus_9686#3 ------------------------------------------------------------
consensus_9686#0 GCCTG-GTTCTTCCTGCAAACGGCACCACAAACAGGCACAACACAGC-TGTACGTGTTTT 1497
consensus_9686#2 GATGATGCGCGTCCCGAACTCGACACCGATCGTATGCGGACAGCTGGCCATAAACTTCTT 320
consensus_9686#1 TATTCGCTGCCTTCATAGAGAATACTCTCAATCACAGAAAAAGGCGTAATTACTCCTCCG 439
consensus_9686#3 --------------------------------------------------AATTCCGGTG 10
consensus_9686#0 TATTCGCTGCCTTCA--AGAGAAACTCTCAATCACAGAAAAAGGCGTAATTACTCCTCCG 1555
consensus_9686#2 CTCTGTGAACTGATGCAGCAGGCAGCTTTTGCCGACTCCCATATCGCCGATTATGATGTA 380
*
consensus_9686#1 TGTCAATGCATCCGCATCGGTGTGCAAAGGTGCTGACGGTTCGACGGATCGTATCGAAC- 498
consensus_9686#3 TGCCAAA-----CGNGTCNCTNCG-ACCGGTTACGAC-------CGGACTCGATCGAACC 57
consensus_9686#0 TGTCAATGCATCCGCATCGGTGTGCAAAGGTGCTGACGGTTCGACGGATC-GATCGAAC- 1613
consensus_9686#2 CTTGAAGATATACGAATAATTATA---CGGTCCGGCCGACATGATGAATAGCGGTAGTTA 437
** ** * * *** * * * *
consensus_9686#1 TTTGCTAGATTTTGCTCCCGTTCCGA-TTGGCCGACC-GGTGCGGGAA-ACTGAGAACGG 555
consensus_9686#3 TTTGCTAGTTTTGCTCCNNGTTCCGACTTGGCCGACCCGGTGCGGGAA-ACTGAGAACGG 116
consensus_9686#0 TTTGCTAGTTTTG-CTCCCGTTCCGA-TTGGCCGACC-GGTGCGGGAA-ACTGAGAACGG 1669
consensus_9686#2 ATTGCAGCTTTCTATTGGGCAGTAGAAGTATTTTTCT--GTGTGAAAATATTCACACCGT 495
**** ** ** * * *** * ** * * * * **
consensus_9686#1 GCGGTCAGCGATGTGCGTCACGGTAT-TTAGC-AGGGATTTGCAC-TGTTTTGTCGC--- 609
consensus_9686#3 GCGGTCAGCGATGTGCGTCACGGTAT-TTAGNCAGGGATTTGCACCTGTTTTGTCGC--- 172
consensus_9686#0 GCGGTCAGCGATGTGCGTCACGGTAT-TTAGC-AGGGATTTGCAC-TGTTTTGTCGC--- 1723
consensus_9686#2 TTGTTGTTTTTCTTGCTTCATTCTCCGCCCACCTCCACCCCTCACATTTTCCTTTGCACA 555
* * *** *** * *** * ** * **
consensus_9686#1 ---CTGCTTTTGTC--CTTGCCACCATACG-TTTGCAAATTAACCTCGG-GCGATTCGTG 662
consensus_9686#3 ---CTGCTTTTGTC--CTT-CCACGATACGCTTTGCAAAATTACCTAAACGTGCCANGGT 226
consensus_9686#0 ---CTGCTTTTGTC--CTT-CCACCATACG-TTTGCAAAATTTACAACATATTCCCGGAC 1776
consensus_9686#2 AAACTGCACACAGTGACTTTCTTCAAGGCCACAGGCGAAACAACAACAACAAATAACGAT 615
**** *** * * * * ** ** *
consensus_9686#1 CNTGAGCATGGG------------------------------------------- 674
consensus_9686#3 CTTGGCC------------------------------------------------ 233
consensus_9686#0 TGTATTGATGGTGTTTAGGGGGAGGGCAGGTCGATGGCCAAGGTAGGTAGAGCGG 1831
consensus_9686#2 TTTATCGACATGAGTAATTCAA--------------------------------- 637
*
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||