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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9693#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 742 fasta sequence
[CCGCGGACGCGTGGGCGGACGCGTGGGTTGTGCAGAAAAAGCCGAACCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTA-TCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA-GGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGC-GACAACC-GGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATAAGAAATACACTAAAAAGACCAAAAAAAA]
[+] EMBL BM576047 [CCGCGGACGCGTGGGCGGACGCGTGGGTTGTGCAGAAAAAGCCGAACCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTA TCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGAGGGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGCGGACAACCGGGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATA ]
[+] EMBL BM608431 [ ccgAGAAAAAGCCGAACCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTA TCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGC GACAACC GGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTTACATGTAAGCAAATCTCATC ]
[+] EMBL BM587887 [ ccgGCCGAACCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTA TCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTCCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCA ]
[+] EMBL BM610931 [ ccgCCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTA TCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGC GACAACC GGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATAAGAAA ]
[+] EMBL BX629034 [ AAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTA TCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGC GACAACC GGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATAAGAAA ]
[+] EMBL BX614396 [ CTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTATTCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGC GACAACC GGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTTACATGTAAGCAAAT ]
[+] EMBL BX613345 [ AACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTA TCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGC GACAACC GGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATAAGAAATACACTAAAA ]
[+] EMBL BX627383 [ CCTTTGCCGGCACACCGCAGTAAAACAAGCACTA TCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCACCACNAACCTTCGTGACGAAAGGTCACATCCGC AAATGCCAACAGCACGAACGAAACGGGC GACAACC GGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTT ]
[+] EMBL AGA282387 [ GCAGTAAAACAAGCACTA TCCGGAAAAAAACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCNACACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAG ]
[+] EMBL BX620023 [ ATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGC GACAACC GGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATAAGAAATACACTA ]
[-] EMBL AGA280764 [ TCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTGTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGA GGAGCAGAGTGTGAAATGCAATGCACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGC GACAACC GGAGTGCGTGTGTGAAGAAGCAAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATAAGAAATACACTAAAAAGACCAAAAAAAA]
consensusID : consensus_9693#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 702 fasta sequence
[CCGACAAGGGTTACTTGTGCAGAAAAAGCCGAACCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAA-ACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTG-GCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGCTGTCGATCAGTCTGTTTGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGTAACGA-CGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCGCAAAGAAGGAAATGGTTTCGGGGAGCGGAGTGTGAGATGCAATGCACTACAAACCTTTGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGATCAAAACGGGCGACAACCGGGCGTGCGTGTGTGAAGAAGCAAAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATAAGAAATACACTGAAAAGACC]
[+] EMBL BM591951 [CCGACAAGGGTTACTTGTGCAGAAAAAGCCGAACCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTACAACAAGCACTATCCGGAAAAAA ACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTG GCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGAT ]
[+] EMBL BM591955 [CCGACAAGGGTTACTTGTGCAGAAAAAGCCGAACCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAA ACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTG GGCAGCGTGCTGCTGCTGT ]
[+] EMBL BM618032 [ ccgGAAAAAGCCGAACCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGTAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAA ACATCATGGATCTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTGTTCCCGCACCTG GCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCAAAGGAAAGCGTCATCTTTAAGGAGCTGTCGATCAGTCTGTTTGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGTAACGA CGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCGCAAAGAAGGAAATGGTTTCGGGGAGCGGAGTGTGAGATGCAATGCACTACAAACCTTTGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGATCAAAACGGGCGACAACCGGGCGTGCGTGTGTGAAGAAGCAAAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATAAGAAATACACTGAAAAGACC]
[+] EMBL BX621077 [ AAAAGCCGAACCCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGTAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAACAAAACAAGCACTATCCGGAAAAAACACATCATGGATCTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTGTTCCCGCACCTG GCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCTCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTCAAGGAGCTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGTAACGACCGGGAACTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGCCGGTGCGCAAAGAAGGAAATGGTTTCGGGGAGCGGAGTGTGAGATGCAATGCACTACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGCGACAAAC GGCGTGCGTGTGTGAAGAAGC AAAGTGAACGTTTTTACATGTAAGCAAATCTCATCATAAGAAATACACTGAAAAG ]
[+] EMBL BX621842 [ TATGTGTCNCCGGTCAATCCGGNCGTATTCCCGCACCTGNACCAGCGTGCTGCTGCTGTTCNGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAA ]
consensusID : consensus_9693#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 688 fasta sequence
[TCAGCAGATCCCGNGTATACTTGTGCAGAAAAAGCCACCGNCGTACTTAAGTAGCTTGTTTTTGTAAAATAGCTGGGATTCTACTACACTAGTCAAACAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAAACATCATGGGNTTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCGNATTACCCGCACCTGGCAGGTGCTGTGCTGTTCGGCACTATCTTCACCGCTGGCTCGGTCCTTTTGTGTACCGCCCGAAGGAACCGTACAAGGAGAGCGTCATACTTNAACGGAGCTTGNCGNTCAGTCTGTTCGCCTCGCCTGATATCACTACGGCGGTACGCGTAGTGGCTCGTTCTCCTGGCTGGCTACTCCGCGTCCGGGATATACGTTGTAAATAAACGGGGCGCAAACNGAACCGGGAACGGTGTAGACCCGAACGCGNNCGACGCTCCTCAATTCCGCACCATNTCNGCTACAAAGCAACCCGCCATTNCATCTCANCCACTCCCNCACNCAGGAACTCCNGAACCCCCTCCNGCCAANANCCCCGCGCTACAAANCCAATGGACGGGNGAAACACGGCAANCGCGNNGGACACNGGCNACCACGCGACCACACANCGCNCACANCGCCACACCAGCCCCNCACCCACACCTACNCGACGACGCACC]
[+] EMBL AL695483 [TCAGCAGATCCCGNGTATACTTGTGCAGAAAAAGCCACCGNCGTACTTAAGTAGCTTGTTTTTGTAAAATAGCTGGGATTCTACTACACTAGTCAAACAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAAACATCATGGGNTTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCGNATTACCCGCACCTGGCAGGTGCTGTGCTGTTCGGCACTATCTTCACCGCTGGCTCGGTCCTTTTGTGTACCGCCCGAAGGAACCGTACAAGGAGAGCGTCATACTTNAACGGAGCTTGNCGNTCAGTCTGTTCGCCTCGCCTGATATCACTACGGCGGTACGCGTAGTGGCTCGTTCTCCTGGCTGGCTACTCCGCGTCCGGGATATACGTTGTAAATAAACGGGGCGCAAACNGAACCGGGAACGGTGTAGACCCGAACGCGNNCGACGCTCCTCAATTCCGCACCATNTCNGCTACAAAGCAACCCGCCATTNCATCTCANCCACTCCCNCACNCAGGAACTCCNGAACCCCCTCCNGCCAANANCCCCGCGCTACAAANCCAATGGACGGGNGAAACACGGCAANCGCGNNGGACACNGGCNACCACGCGACCACACANCGCNCACANCGCCACACCAGCCCCNCACCCACACCTACNCGACGACGCACC]
consensusID : consensus_9693#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 642 fasta sequence
[GATCGCCCGAGGTTTTACTTGTGCAGAAAAAGCGAA-CCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAA-ACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCA-CTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCAACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGAGGAGCAGAGTGTGAAATGCAATGGACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGCGACAACG]
[+] EMBL AL693654 [GATCGCCCGAGGTTTTACTTGTGCAGAAAAAGCGAA CCGCACGTAGTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACCCTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAA ACATCATGGATTTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCA CTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTTAAGGAGTTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAACACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCAACCCCGCTCAGCCATTGCCGGTGCACAACGCAAAGAGGGAAATGGTTTCGAGGAGCAGAGTGTGAAATGCAATGGACCACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGGCGACAACG]
[+] EMBL AL931706 [ GCCCGAGGTTT CTTGTGCAGAAAAAGCGAACCCGCACGTAGT AAAGTAGCTTG TTTTGTAAAATAGCTGTAATTCTACTACCACTAGTC AACCAACCCTTTGCCGGCACACCGCAACAAAACAAGCACTATCCGGAAAAAACACATCATGGATCTGATGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTGTTCCCGCACCTGGCCAGCGTGCTGCTGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCTCGCCCGAAGCAACCGTCCAAGGAGAGCGTCATCTTCAAGGAGCTGTCGATCAGTCTGTTCGCCTCGCTGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAATAAC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9693#0 CCGCGGACGCGTGGGCGGAC--GCGTG--GGTTGTGCAGAAAAAGCCGAACCCGCACGTA 56
consensus_9693#1 ---------------CCGACAAGGGTT--ACTTGTGCAGAAAAAGCCGAACCCGCACGTA 43
consensus_9693#3 -------------GATCGCCCGAGGTTTTACTTGTGCAGAAAAAGC--GAACCGCACGTA 45
consensus_9693#2 -----------TCAGCAGATCCCGNGTATACTTGTGCAGAAAAAGCCACCGNCGTACTTA 49
* *************** ** ** **
consensus_9693#0 GTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACC 116
consensus_9693#1 GTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACC 103
consensus_9693#3 GTAAAAGTAGCTTGTTTTTGTAAAATAGCTGCAATTCTACTACCACTAGTCAAACCAACC 105
consensus_9693#2 -----AGTAGCTTGTTTTTGTAAAATAGCTGGGATTCTACTAC-ACTAGTCAAAC-AACC 102
************************** ********** *********** ****
consensus_9693#0 CTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAAACATCATGG-ATTTGA 175
consensus_9693#1 CTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAAACATCATGG-ATTTGA 162
consensus_9693#3 CTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAAACATCATGG-ATTTGA 164
consensus_9693#2 CTTTGCCGGCACACCGCAGTAAAACAAGCACTATCCGGAAAAAAACATCATGGGNTTTGA 162
***************************************************** *****
consensus_9693#0 TGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGC 235
consensus_9693#1 TGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGC 222
consensus_9693#3 TGGTACGCTATGTGTCGCCGGTCAATCCGGCCGTATTCCCGCACCTGGCCAGCGTGCTGC 224
consensus_9693#2 TGGTACGCTATGTGTCGCCGGTCAATCCGGCGNATTACCCGCACCTGGCAGG--TGCTG- 219
******************************* * ************ * *****
consensus_9693#0 TGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGC 295
consensus_9693#1 TGCTGTTCGGCACCTTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGC 282
consensus_9693#3 TGCTGTTCGGCAC-TTCTTCACCGCCTGGTTCTTCGTGTTCGAGGTGTCCCGCCCGAAGC 283
consensus_9693#2 TGCTGTTCGGCACTATCTTCACCGCTGGCTCGGTCCTTTT----GTGTACCGCCCGAAGG 275
************* ********** * * ** * ** **** **********
consensus_9693#0 AACCGTCCAAGGAGAGCGTCATCTTTAA--GGAGTT-GTCGATCAGTCTGTTCGCCTCGC 352
consensus_9693#1 AACCGTCCAAGGAGAGCGTCATCTTTAA--GGAGCT-GTCGATCAGTCTGTTTGCCTCGC 339
consensus_9693#3 AACCGTCCAAGGAGAGCGTCATCTTTAA--GGAGTT-GTCGATCAGTCTGTTCGCCTCGC 340
consensus_9693#2 AACCGTACAAGGAGAGCGTCATACTTNAACGGAGCTTGNCGNTCAGTCTGTTCGCCTCGC 335
****** *************** ** * **** * * ** ********** *******
consensus_9693#0 ----TGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAA 408
consensus_9693#1 ----TGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAA 395
consensus_9693#3 ----TGTTTCTCGGGTTCGGTGTGCTGTTTCTGCTGCTCTCGGTCGGGATATACGTGTAA 396
consensus_9693#2 CTGATATCACTACGGCGGTACGCGTAGTGGCTCGTTCTCCTGGCTGGCTACTCCGCGT-- 393
* * ** ** * * ** ** * *** ** ** * ** **
consensus_9693#0 TAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAA 468
consensus_9693#1 TAACGGGCGTAACGAC----------------GGGAGCTCTTATCGCAACATTTCCTCAA 439
consensus_9693#3 TAACGGGCGCAACGACCGGGACGTGTGCCGACGGGAGCTCTTATCGCAACATTTCCTCAA 456
consensus_9693#2 --CCGGGATATACGTT----------------GTAAA---TAAACGGGGCGCAAACNGAA 432
**** *** * * * * ** * * **
consensus_9693#0 CACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGC 528
consensus_9693#1 CACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCACACCCCGCTCAGCCATTGC 499
consensus_9693#3 CACCGCATTTCTAGCATTCTTTTGAATCTTACCCTCTGCCA-ACCCCGCTCAGCCATTGC 515
consensus_9693#2 CCGGGAACGGTGTAGACCCGAACGCGNNCGACGCTCCTCAA--TTCCGC---ACCATNTC 487
* * * * * * ** *** * * **** **** *
consensus_9693#0 CGGTGCACAACGCAAAGAGGGAAATGGTTTCGAGGAGCAGAGTGTGAAATGCAATG-CAC 587
consensus_9693#1 CGGTG-----CGCAAAGAAGGAAATGGTTTCGGGGAGCGGAGTGTGAGATGCAATG-CAC 553
consensus_9693#3 CGGTGCACAACGCAAAGAGGGAAATGGTTTCGAGGAGCAGAGTGTGAAATGCAATG-GAC 574
consensus_9693#2 NGCTA-------CAAAGCAACCCGCCATTNCATCTCANCCACTCCCNCACNCAGGAACTC 540
* * ***** ** * * * * ** *
consensus_9693#0 CACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGG 647
consensus_9693#1 TACAAACCTTTGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGATCAAAACGGG 613
consensus_9693#3 CACAAACCTTCGTGACGAAAGGTCACATCCGCAAAATGCCAACAGCACGAACGAAACGGG 634
consensus_9693#2 CNGAACCCCCTCCNGCCAANANCCCCGCGC-TACAAANCCAATGG-ACGGGNGAAACA-- 596
** ** * ** * * * * ** **** * *** ****
consensus_9693#0 CGACAACCG-GA-GTGCGTGTGTGAAGAAGCAAA-GTG-AACGTTTTTACATGTAAGCAA 703
consensus_9693#1 CGACAACCG-GGCGTGCGTGTGTGAAGAAGCAAAAGTG-AACGTTTTTACATGTAAGCAA 671
consensus_9693#3 CGACAACG---------------------------------------------------- 642
consensus_9693#2 CGGCAANCGCGNNGGACACNGGCNACCACGCGACCACACANCGCNCACANCGCCACACCA 656
** ***
consensus_9693#0 ATCTCATCATAAGAAATACACTAAAAAG-ACCAAAAAAAA 742
consensus_9693#1 ATCTCATCATAAGAAATACACTGAAAAG-ACC-------- 702
consensus_9693#3 ----------------------------------------
consensus_9693#2 GCCCCNCACCCACACCTACNCGACGACGCACC-------- 688
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||