These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9767#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1440 fasta sequence [GCACATGCCTGCCTTTTGTTNGTATTTTTTTGGTTTGGTTTTCCTCCTCTTATGCGTTCACCTTATATATCCTGCCGCATAAAGAGAGGTGGCGGTTTGTTCGATCTGGTTGTCTGCATTGAACACGGCTCGACCAAACGATCCGGACGGTTTTGCAATGTCTACGATGGACATGGTACGCAACCGCTGGCTGAGCGGACCCGGCATCAGTAGGACAGTGCTGACGGTGAGCGCGATCCAACGGTGAAGTCCTTATACTGCGAGAATACTGATATCTTATCCTTCAGCTGCTGGCACAGCTGCAGCGCGACGGTAAACAGCACCAGCACCTCGTTCAGCCACGGTACGGAGCACTCCGCCTGGCACGAGTCGAACTTCATCGTGCCCTGGAAGTTGGTCAGCTGGTACGCGACAAAGATCAGCTTGTGGCTCTGGATGTAGAAGCTGATCGCTAAATCTTCTGGCAGGTTCGGCGACAGCGCCTTCATGTTGCGGCTCTTCATCAGCTCGTCGATCGGCTTCTTGCGGGGCACGACGAGCGAGGTGCGGCCAGCGCTGCAACGCCCCTAGAATGTTGCCCAGTATGTGCAGCACCTC-GTCGGACGTTTTGAAATGGTACGCACTGTCCACGTTGTCGATGTGGTTGATCGCCTGCTGCAGATGGTTGGCCGCATCCTGCACCTGCTGTATCTTCCACGGGTAGTCCTGGGTGATGGAGGTGCGCTGGATCTGTTGCTGCTGCCGCTGCACCTTAAAGTTGATGTCCGCATGCGTTATGCTGTCCCCGGTAAGCGTGACGATACACTTGAGCTGTTCCGGTGCGGCCGTCAGCACAAACTTGTCCTGCTTCTTGCCCTCGTTACCGTACAGCGGGACCGGAAATCGGTGGGCACACTCCACCAGGATAACGTGCAGCTGCTTCAGCACCGAATGTACCTCCTCGTGTAGCACCCACTCGAATTCCACCTGCAGATTTAGGGCTTCCTCCTTCTC-GCAGTCTGCCATCTTCT-GGCCTACTTTTCGCTGTGGCGGCGGTCGCCTATTGTACGGGCCACTGCTGGCGCTCCCTACCGATGCGTAGCTGGTACCGCTCTGCCGCAAACTGCTGGTACGGTCGAACGCCGGACCCGAACGGTTCGGTGCCGCTTCCGGACTGGGCGGTACGAAGATCTGCTCCAGATAGCGCCACCGGGCCTGAGCGGAAGTGGAAGGGCTCGGACTCGTAGACGGC-ACACTGCCGTCGTCGCTGGCGGTCGTGTCGAGCTGGTCCGAGAAGGTTACCTTTACTTTTTTCCCACTCTTCCGGCGGGAGTGTGGTCTGGTGAACCAGTTCGATCCGCTGCGTTTTCCACACTATCACTTTTACACGTAATGATTTTTCCAGCACTCTGTTTTTTGGGGGCAAACCTTTGCTCCTTTTGCTGCTGCTGCTGCTGCCGG] [+] EMBL BX466694 [GCACATGCCTGCCTTTTGTTNGTATTTTTTTGGTTTGGTTTTCCTCCTCTTATGCGTTCACCTTATATATCCTGCCGCATAAAGAGAGGTGGCGGTTTGTTCGATCTGGTTGTCTGCATTGAACACGGCTCGACCAAACGATCCGGACGGTTTTGCAATGTCTACGATGGACATGGTACGCAACCGCTGGCTGAGCGGACCCGGCATCAGTAGGACAGTGCTGACGGTGAGCGCGATCCAACGGTGAAGTCCTTATACTGCGAGAATACTGATATCTTATCCTTCAGCTGCTGGCACAGCTGCAGCGCGACGGTAAACAGCACCAGCACCTCGTTCAGCCACGGTACGGAGCACTCCGCCTGGCACGAGTCGAACTTCATCGTGCCCTGGAAGTTGGTCAGCTGGTACGCGACAAAGATCAGCTTGTGGCTCTGGATGTAGAAGCTGATCGCTAAATCTTCTGGCAGGTTCGGCGACAGCGCCTTCATGTTGCGGCTCTTCATCAGCTCGTCGATCGGCTTCTTGCGGGGCACGACGAGCGAGGTGCGGCCAGCGCTGCAACGCCCCTAGAATGTTGCCCAGTATGTGCAGCACCTCGGTCGGACGTTTTGAAATGGTACGCAC ] [-] EMBL AGA283789 [ AGGTGGCGGTTTGTTCGATCTGGTTGTCTGCATTGAACACGGCTCGACCAAACGATCCGGACGGTTTTGCAATGTCTACGATGGACATGGTACGCAACCGCTGGCTGAGCGGACCCGGCATCAGTAGGACAGTGCTGACGGTGAGCGCGATCCAACGGTGAAGTCCTTATACTGCGAGAATACTGATATCTTATCCTTCAGCTGCTGGCACAGCTGCAGCGCGACGGTAAACAGCACCAGCACCTCGTTCAGCCACGGTACGGAGCACTCCGCCTGGCACGAGTCGAACTTCATCGTGCCCTGGAAGTTGGTCAGCTGGTACGCGACAAAGATCAGCTTGTGGCTCTGGATGTAGAAGCTGATCGCTAAATCTTCTGGCAGGTTCGGCGACAGCGCCTTCATGTTGCGGCTCTTCATCAGCTCGTCGATCGGCTTCTTGCGGGGCACGAC ] [+] EMBL AGA285454 [ ATCCGGACGGTTTTGCAATGTCTACGATGGACATGGTACGCAACCGCTGGCTGAGCGGACCCGGCATCAGTAGGACAGTGCTGACGGTGAGCGCGATCCAACGGTGAAGTCCTTATACTGCGAGAATACTGATATCTTATCCTTCAGCTGCTGGCACAGCTGCAGCGCGACGGTAAACAGCACCAGCACCTCGTTCAGCCACGGTACGGAGCACTCCGCCTGGCACGAGTCGAACTTCATCGTGCCCTGGAAGTTGGTCAGCTGGTACGCGACAAAGATCAGCTTGTGGCTCTGGATGTAGAAGCTGATCGCTAAATCTTCTGGCAGGTTCGGCGACAGCGCCTTCATGTTGCGGCTCTTCATCAG ] [-] EMBL AGA284158 [ CGGACGGTTTTGCAATGTCTACGATGGACATGGTACGCAACCGCTGGCTGAGCGGACCCGGCATCAGTAGGACAGTGCTGACGGTGAGCGCGATCCAACGGTGAAGTCCTTATACTGCGAGAATACTGATATCTTATCCTTCAGCTGCTGGCACAGCTGCAGCGCGACGGTAAACAGCACCAGCACCTCGTTCAGCCACGGTACGGAGCACTCCGCCTGGCACGAGTCGAACTTCATCGTGCCCTGGAAGTTGGTCAGCTGGTACGCGACAAAGATCAGCTTGTGGCTCTGGATGTAGAAGCTGATCGCTAAATCTTCTGGCAGGTTCGGCGACAGCGCCTTCATGTTGCGGCTCTTCATCAGCTCGTCGATCGGCTTCTTGCGGGGCACGAC ] [-] EMBL AGA280370 [ ATGTCTACGATGGACATGGTACGCAACCGCTGGCTGAGCGGACCCGGCATCAGTAGGACAGTGCTGACGGTGAGCGCGATCCAACGGTGAAGTCCTTATACTGCGAGAATACTGATATCTTATCCTTCAGCTGCTGGCACAGCTGCAGCGCGACGGTAAACAGCACCAGCACCTCGTTCAGCCACGGTACGGAGCACTCCGCCTGGCACGAGTCGAACTTCATCGTGCCCTGGAAGTTGGTCAGCTGGTACGCGACAAAGATCAGCTTGTGGCTCTGGATGTAGAAGCTGATCGCTAAATCTTCTGGCAGGTTCGGCGACAGCGCCTTCATGGTGCGGCTCTTCATCAGCTCGTCGATCGGCATCTTGCGGGGCACGAC ] [+] EMBL AGA284573 [ GCCCCTAGAATGTTGCCCAGTATGTGCAGCACCTC GTCGGACGTTTTGAAATGGTACGCACTGTCCACGTTGTCGATGTGGTTGATCGCCTGCTGCAGATGGTTGGCCGCATCCTGCACCTGCTGTATCTTCCACGGGTAGTCCTGGGTGATGGAGGTGCGCTGGATCTGTTGCTGCTGCCGCTGCACCTTAAAGTTGATGTCCGCATGCGTTATGCTGTCCCCGGTAAGCGTGACGATACACTTGAGCTGTTCCGGTGCGGCCGTCAGCACAAACTTGTCCTGCTTCTTGCCCTCGTTACCGTACAGCGGGACCGGAAATCGGTGGGCACACTCCACCAGGATAACGTGCAGCTGCTTCAGCACCGAATGTACCTCCTCGTGTAGCACCCACTCGAATTCCACCTGCAGATTTAGGGCTTCCTCCTTCTC GCAGTCTGCCATCTTCTGGGCCTA ] [+] EMBL AGA283566 [ CCCCTAGAATGTTGCCCAGTATGTGCAGCACCTC GTCGGACGTTTTGAAATGGTACGCACTGTCCACGTTGTCGATGTGGTTGATCGCCTGCTGCANATGGTTGGCCGCATCCTGCACCTGCTGTATCTTCCACGGGTAGTCCTGNGTGATGGAGGTGCGCTGGATCTGTTGCTGCTGCCGCTGCACCTTAAAGTTGATGTCCGCATGCGTTATGCTGTCCCCGGTAAGCGTGACGATACACTTGAGCTGTTCCGGTGCGGCCGTCAGCACANACTTGTCCTGCTTCTTGCCCTCGTTACCGTACAGCGGGACCGGAAATCGGTGGGC ] [-] EMBL BM579566 [ TGCGTTATGCTGTCCCCGGTAAGCGTGACGATACACTTGAGCTGTTCCGGTGCGGCCGTCAGCACAAACTTGTCCTGCTTCTTGCCCTCGTTACCGTACAGCGGGACCGGAAATCGGTGGGCACACTCCACCAGGATAACGTGCAGCTGCTTCAGCACCGAATGTACCTCCTCGTGTAGCACCCACTCGAATTCCACCTGCAGATTTAGGGCTTCCTCCTTCTC GCAGTCTGCCATCTTCT GGCCTACTTTTCGCTGTGGCGGCGGTCGCCTATTGTACGGGCCACTGCTGGCGCTCCCTACCGATGCGTAGCTGGTACCGCTCTGCCGCAAACTGCTGGTACGGTCGAACGCCGGACCCGAACGGTTCGGTGCCGCTTCCGGACTGGGCGGTACGAAGATCTGCTCCAGATAGCGCCACCGGGCCTGAGCGGAAGTGGAAGGGCTCGGACTCGTAGACGGC ACACTGCCGTCGTCGCTGGCGGTCGTGTCGAGCTGGTCCGAGAAGGTTACCTTTACTTTTTTCCCACTCTTCCGGCGGGAGTGTGGTCTGGTGAACCAGTTCGATCCGCTGCGTTTTCCACACTATCACTTTTACACGTAATGATTTTTCCAGCACTCTGTTTTTTGGGGGCAAACCTTTGCTCCTTTTGCTGCTGCTGCTGCTGCCGG] [-] EMBL BX626239 [ CAGCGGGACCGGAAATCGGTGGGCACACTCCNCCAGGATAACGTGCAGCTGCTTCAGCACNGAATGTACCTCCTCGTGTAGCACCCACTCGAATTCCACCCGCAGATTTAGGGCTTCCTCCTTCTC GCAGTCTGCCATCTTCT GGCCTACTTTTCGCTGTGGCGGCNGTCGCATATTGTACGGGCCACTGCTGGCGCTCCCTACCGATGCGTAGATGGTACCGCTCTGCCGCAAACTGCTGGTACGGTCGAACGCCGGACCCGAACGGTTCGGTGCCGCTTCCGGACTGGGCGGTANGAAGATCTGCTCCAGATAGCGCCNCCGGGCCTGAGCGGAAGTGGAAGGGCTCGGACTCGTAGACGGC ACACTGCCGTCGTCGCTGGCGGTCGTGTCGAGCTGGTCCGAGAAGGTTACCTTTACTTTTTTCCCACTCTTCCGGCGGGAGTGTGGTCTGGTGAACCAGTTCGATCCGCTGCGTTTTCCACACTATCACTTTTACACGTAATGATTTTTCCAGCACTCTGTTTTTT ] [-] EMBL BX622508 [ ACTCCACCAGGATAACGTGCAGCTGCTTCAGCACCGAATGTACCTCCTCGTGTAGCACCCACTCGAATTCCACCTGCAGATTTAGGGCTTCCTCCTTCTC GCAGTCTGCCATCTTCT GGCCTACTTTTCGCTGTGGCGGCGGTCGCCTATTGTACGGGCCACTGCTGGCGCTCCCTACCGATGCGTAGCTGGTACCGCTCTGCCGCAAACTGCTGGTACGGTCGAACGCCGGACCCGAACGGTTCGGTGCCGCTTCCGGACTGGGCGGTACGAAGATCTGCTCCAGATAGCGCCACCGGGCCTGAGCGGAAATGGAAGGGCTCGGACTCGTAGACGGC ACACTGCCGTCGTCGCTGGCGGTCGTGTCGAGCTGGTCCGAGAAGGTTACCTTTACTTTTTTCCCACTCTTCCGGCGGGAGTGTGGTCTGGTGAACCAGTTCGATCCGCTGCGTTTTCCACACTATCACTTTTACACGTAATGATTTTTCCAGCACTCTGTTTTTTGG ] [-] EMBL BX620913 [ TGCAGATTTAGGGCTTCCTCNTTCTCGGCAGTCTGCCATCTTCT GGCNTACTTTTCGCTGTGGCGGCGGTCGCCTATTGTNCGGGCCACTGCTGGCGCTCCCTACCGATGCGTAGCTGGTACCGCTCTGCCGCAAACTGCTGGTACGGTCGAACNCCGGACCCGAACGGTTCGGTGCCGCTTCCGGACTGGGCGGTACGAAGATCTGCTCCAGATAGCGCCACCGGGCCTGAGCGGAAGTGGAAGGGCTCGGACTCGTAGACGGC ACACTGCCGTCGTCGCTGGCGGTCGTGTCGAGCTGGTCCGAGAAGGTTACCTTTACTTTTTTCCCACTCTTCCGGCGGGAGTGTGGTCTGGTGAACCAGTTCGATCCGCTGCGTTTTCCACACTATCACTTTTACACGTA ] [-] EMBL AGA285932 [ GGCGGTCGCCTATTGTACGGGCCACTGCTGGCGCTCCCTACCGATGCGTAGCTGGTACCGCTCTGCCGCAAACTGCTGGTACGGTCGAACGCCGGACCCGAACGGTTCGGTGCCGCTTCCGGACTGGGCGGTACGAAGATCTGCTCCAGATAGCGCCACCGGGCCTGAGCGGAAGTGGAAGGGCTCGGACTCGTAGACGGCAACACTGCCGTCGTCGCTGGCGG ] [-] EMBL AGA284855 [ AGATCTGCTCCAGATAGCGCCACCGGGCCTGAGCGGAAGTGGAAGGGCTCGGACTCGTAGACGGC ACACTGCCGTCGTCGCTGGCGGTCGTGTCGAGCTGGTCCGAGAAGGTTACCTTTACTTTTTTCCCACTCTTCCGGCGGGAGTGTGGTCTGGTGAACCAGTTCGATCCGCTGCGTTTTCCACACTATCACTTTTACACGTAAT ] consensusID : consensus_9767#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1227 fasta sequence [ATGTTAGTACAGTTTTCTTTCGGTTTGCGTGTAGATTTATAATTTTGGCATACTAATTCTACGGTTAGGAATATTGTTGGCTTAAGTTATCGCATTCGCTCAATGTGTGTATTATGTTATCCTTTCTGCCAATTTAGATAAGTACAGATTACACCTTTTCGAAATAGAAAGGAAAAGGACTGGGTTTTCAGGGACATTTCTACTGACTTTGTTCACAACTAACCGATTGAATGATGATTCGAACACACACTGCCAATTACTTCCTTGTATATCTCGATTTAGTAACGATCAAATGTATTGCTGCATCCCTTCAAATCTCCTTTCCGCAAAATCATGGCACTAAGGAATCGAATTTTGTGAAAGGAGCAAAACCTGATTGGACTACCAGCGCGGTTGTCGATTATACACAACACGAAAACCTCGAATACGCTTGATGAAACAGGTTTTTTTTGGATAGTACTTACAGGCTAATGCAATAACAACGGGATTAGCGCTTTTTGTGTTGATTGAATAATAACAAACATCAAGTATACACGCATTCCCAACAACACGACTGCAAGAAAATCCGTCGTAGGGACCGGGTAGGGAGCCAGAGTATTTCCGCGAGTCTTATACAGCAGTACGGTACAGCGACCGTGTGGTATATTTAACTATCCTTTT--TTTTTTTT--GTTTGGTTTTCCTCCTCTTATGCGTTCACCTTATATATCCTGCCGCATAAAGAGAGGTGGCGGTTTGTTCGATCTGGTTGTCTGCATTGAACACGGCTCGACCAAACGATCCGGACGGTTTTGCAATGTCTACGATGGACATGGTACGCAACCGCTGGCTGAGCGGACCCGGCATCAGTAGGACAGTGCTGACGGTGAGCGCGATCCAACGGTGAAGTCCTTATACTGCGAGAATACTGATATCTTATCCTTCAGCTGCTGGCACAGC-TGCAGCGCGACGGTAAACAGCACCAGCACCTCGTTCAGCCACGGTACGGAGCACTCCGCCTGGCACGAGTCGAACTTCATCGTGCCCTGGAAGTTGGTCAGCTGGTACGCGACAAAGATCAGCTTGTGGCTCTGGATGTAGAAGCTGATCGCTAAATCTTCTGGCAGGTTCGGC-GACAGCGCCTTCATGTTGCGGCTCTTCATCAGC-TCGTCGATC-GGCTTCT-TG-CGGGGCACGACGAGCGAGGTGCGGCCGCGCTGCAACGCACATAGAATGTTGCCCAGTAAGGCAGCA] [+] EMBL AGA282071 [ATGTTAGTACAGTTTTCTTTCGGTTTGCGTGTAGATTTATAATTTTGGCATACTAATTCTACGGTTAGGAATATTGTTGGCTTAAGTTATCGCATTCGCTCAATGTGTGTATTATGTTATCCTTTCTGCCAATTTAGATAAGTACAGATTACACCTTTTCGAAATAGAAAGGAAAAGGACTGGGTTTTCAGGGACATTTCTACTGACTTTGTTCACAACTAACCGATTGAATGATGATTCGAACACACACTGCCAATTACTTCCTTGTATATCTCGATTTAGTAACGATCAAATGTATTGCTGCATCCCTTCAAATCTCCTTTCCGCAAAATCATGGCACTAAGGAATCGAATTTTGTGAAAGGAGCAAAACCTGATTGGACTACCAGCGCGGTTGTCGATTATACACAACACGAAAACCTCGAATACGCTTGATGAAACAGGTTTTTTTTGGATAGTACTTACAGGCTAA ] [-] EMBL BX621065 [ ACCAGCGCGGTTGTCGATTATACACACCACGAAACCCTCGAATACGCTTGATGAAACAGGTTTTTTTTGGATAGTACTTACAGGCTAATGCAATAACAACGGGATTAGCGCTTTTTGTGTTGATTGAATAATAACAAACATCAAGTATACACGCATTCCCAACAACACGACTGCAAGAAAATCCGTCGTAGGGACCGGGTAGGGAGCCAGAGTATTTCCGCGAGTCTTATACAGCAGTACGGTACAGCGACCGTGTGGTATATTTAACTATCCTTTT TTTTTTTT GTTTGGTTTTCCTCCTCTTATGCGTTCACCTTATATATCCTGCCGCATAAAGAGAGGTGGCGGTTTGTTCGATCTGGTTGTCTGCATTGAACACGGCTCGACCAAACGATCCGGACGGTTTTGCAATGTCTACGATGGACATGGTACGCAACCGCTGGCTGAGCGGACCCGGCATCAGTAGGACAGTGCTGACGGTGAGCGCGATCCAACGGTGAAGTCCTTATACTGCGAGAATACTGATATCTTATCCTTCAGCTGCTGGCACAGC TGCAGCGCGACGGTAAACAGCACCAGCACCTCGTTCAGCCACGGTACGGAGCACTCCGCCTGGCACGAGTCGAACTTCATCGTGCCCTGG ] [-] EMBL BX606414 [ CGATTATACACAACACGAAAACCTCGAATACGCTGGATGAAACAGGTTTTTTTTGGATAGTACTTACAGGCTAATGCAATAACAACGGGATTAGCGCTTTTTGTGTTGATTGAATAATAACAAACATCAAGTATACACGCATTCCCAACAACACGACTGCAAGAAAATCCGTCGTAGGGACCGGGTAGGGAGCCAGAGTATTTCCGCGAGTCTTATACAGCAGTACGGTACAGCGACCGTGTGGTATATTTAACTATCCTTTT TTTTTTTT GTTTGGTTTTCCTCCTCTTATGCGTTCACCTTATATATCCTGCCGCATAAAGAGAGGTGGCGGTTTGTTCGATCTGGTTGTCTGCATTGAACACGGCTCGACCAAACGATCCGGACGGTTTTGCAATGTCTACGATGGACATGGTACGCAACCGCTGGCTGAGCGGACCCGGCATCAGTAGGACAGTGCTGACGGTGAGCGCGATCCAACGGTGAAGTCCTTATACTGCGAGAATACTGATATCTTATCCTTCAGCTGCTGGCACAGC TGCAGCGCGACGGTAAACAGCACCAGCACCTCGTTCAGCCACGGTACGGAGCACTCCGCCTGGCACGAGTCGAACTTCATCGTGCCCTGGAAGTTGGTCAGCTGGTACGCGACAAAGATCAGCTTGTGGCTCTGGATGTAGAAGCTGAT GCTAAATCTTCTGGCAGGTTCGGC GACAGCGCCTTCATGTTGCGGCTCTTCATCAGC TCGTCGATC GGCTTCT TG CGGGGCACGACGAGCGAGGTGCGGCCGCGCTGCAACGCACATAGAATGTTGCCCAGTAAGGCAGCA] [-] EMBL BM637880 [ CAGGCTAATGCAATAACAACGGGATTAGCGCTTTTTGTGTTGATTGAATAATAACAAACATCAAGTATACACGCATTCCCAACAACACGACTGCAAGAAAATCCGTCGTAGGGACCGGGTAGGGAGCCAGAGTATTTCCGCGAGTCTTATACAGCAGTACGGTACAGCGACCGTGTGGTATATTTAACTATCCTTTT TTTTTTTT GTTTGGTTTTCCTCCTCTTATGCGTTCACCTTATATATCCTGCCGCATAAAGAGAGGTGGCGGTTTGTTCGATCTGGTTGTCTGCATTGAACACGGCTCGACCAAACGATCCGGACGGTTTTGCAATGTCTACGATGGACATGGTACGCAACCGCTGGCTGAGCGGACCCGGCATCAGTAGGACAGTGCTGACGGTGAGCGCGATCCAACGGTGAAGTCCTTATACTGCGAGAATACTGATATCTTATCCTTCAGCTGCTGGCACAGC TGCAGCGCGACGGTAAACAGCACCAGCACCTCGTTCAGCCACGGTACGGAGCACTCCGCCTGGCACGAGTCGAACTTCATCGTGCCCTGGAAGTTGGTCAGCTGGTACGCGACAAAGATCAGCTTGTGGCTCTGGATGTAGAAGCTGATCGCTAAATCTTCTGGCAGGTTCGGC GACAGCGCgg ] [+] EMBL BX466734 [ ctcaCTTTTCCTGTGTTGTANGTTTGGTTTTCCTCCTCTTATGCGTTCACCTTATATATCCTGCCGCATAAAGAGAGGTGGCGGTTTGTTCGATCTGGTTGTCTGCATTGAACACGGCTCGACCAAACGATCCGGACGGTTTTGCAATGTCTACGATGGACATGGTACGCAACCGCTGGCTGAGCGGACCCGGCATCAGTAGGACAGTGCTGACGGTGAGCGCGATCCAACGGTGAAGTCCTTATACTGCGAGAATACTGATATCTTATCCTTCAGCTGCTGGCACAGCGTGCAGCGCGACGGTAAACAGCACCAGCACCTCGTTCAGCCACGGTACGGAGCACTCCGCCTGGCACGAGTCGAACTTCATCGTGCCCTGGAAGTTGGTCAGCTGGTACGCGACAAAGATCAGCTTGTGGCTCTGGATGTAGAAGCTGATCGCTAAATCTTCTGGCAGGTTCGGCNGACAGCGCCTTCATGTTGCGGCTCTTCATCAGCGTCGTCGATCGGGATTCTNAGCCGGGGCACGACGAGCGAGGTGCGGCCGCGnct ] [+] EMBL AGA285080 [ T TTTTTTTT GTTTGGTTTTCCTCCTCTTATGCGTTCACCTTATATATCCTGCCGCATAAAGAGAGGTGGCGGTTTGTTCGATCTGGTTGTCTGCATTGAACACGGCTCGACCAAACGATCCGGACGGTTTTGCAATGTCTACGATGGACATGGTACGCAACCGCTGGCTGAGCGGACCCGGCATCAGTAGGACAGTGCTGACGGTGAGCGCGATCCAACGGTGAAGTCCTTATACTGCGAGAATACTGATATCTTATCCTTCAGCTGCTGGCACAGC TGCAGCGCGACGGTAAACAGCACCAGCACCTCGTTCAGCCACGGTACGGAGCACTCCGCCTGGCACGAGTCGAACTTCATCGTGCCCTGGAAGTTGGTCAGCTGGTACGCGACAAAGATCAGCTTGTGGCTCTGGATGTAGAAGCTGATCGCTA ] consensusID : consensus_9767#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 671 fasta sequence [CCGGGAACCGGTCCGAGAGACGCGTACATCCACTAGGCGCTCTGGTGGGGCTCTGTGGACCTGAGTAGTGCGCGCTGTCCATGATGGCACTGTAGTTCAAATCAATTGTCGTATTCGAATGGTCGAAATAGTGTTCTTTTGCGGCCAAATAGACGAGTGTCTTGTGTGTTGTGTATACACGAAGAATCGAACCAGCGCCGGTTATCATCAACGAAGGTCGGCGGAGACACACATACTACACCCCTGCTCCCCGTGTGCCGTTGTTTATCGTGCTGTTGATTTTGATAATTATCGAACCAAATTTTTGAGCAAACGCACGAGCCGGGCCGCACAAGATCACGCGGTCCAAACGGTCCAAAAACGGAACGGCCCACAGCGGGCAGTGTGGATGCGCGACCGATCCAGAGGTGTTGCGTTCCCGTGTTGGGGTGATTGGAATTTCACGACCAGGACAAGGTTGCAAATTGAACAAGATTAAACCAGGGGACGGGTGTGCGGTATTCAGGTGAAAGCATTCCTTGACTGATTGGAGGACGCTTCTTCAACCAGGCACTCAACTCAGCTGGCCGCAAATGTTGCGATTCAGCGGATCGAACTGGTTCACCAGACCACACTCCCGCCGGAAGAGTGGGAAAAAAGTAAAGGTAACCTTCTCGGACCAGCTCGACACG] [+] EMBL BM644915 [CCGGGAACCGGTCCGAGAGACGCGTACATCCACTAGGCGCTCTGGTGGGGCTCTGTGGACCTGAGTAGTGCGCGCTGTCCATGATGGCACTGTAGTTCAAATCAATTGTCGTATTCGAATGGTCGAAATAGTGTTCTTTTGCGGCCAAATAGACGAGTGTCTTGTGTGTTGTGTATACACGAAGAATCGAACCAGCGCCGGTTATCATCAACGAAGGTCGGCGGAGACACACATACTACACCCCTGCTCCCCGTGTGCCGTTGTTTATCGTGCTGTTGATTTTGATAATTATCGAACCAAATTTTTGAGCAAACGCACGAGCCGGGCCGCACAAGATCACGCGGTCCAAACGGTCCAAAAACGGAACGGCCCACAGCGGGCAGTGTGGATGCGCGACCGATCCAGAGGTGTTGCGTTCCCGTGTTGGGGTGATTGGAATTTCACGACCAGGACAAGGTTGCAAATTGAACAAGATTAAACCAGGGGACGGGTGTGCGGTATTCAGGTGAAAGCATTCCTTGACTGATTGGAGGACGCTTCTTCAACCAGGCACTCAACTCAGCTGGCCGCAAATGTTGCGATTCAGCGGATCGAACTGGTTCACCAGACCACACTCCCGCCGGAAGAGTGGGAAAAAAGTAAAGGTAACCTTCTCGGACCAGCTCGACACG] consensusID : consensus_9767#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 653 fasta sequence [CCGGAATTAGCTGCGTCGTATAATATATATAGGTGCACCGCGTGTATACTTGATGTTTGTTATTATTCAATCAACACAAAAAGCGCTAATCCCGTTGTTATTGCATTAGCCTGTAAGCACTATCCAAAAACAAAAATACCTGTTTCATCAATCGTATTCGAGGTTTTCGTGTTGTGTATAATCGACAACCGCGCCGGTATTCCAATCAGGTTTTGCTCCTTTCACAAAATTCGATTCCTTAGTGCCATGATTTTGCGGAAAGGAGACTTTAAGCGATGCAGCAATACATTTGATCGTTACTAAATCGAGATATACAAGGAAGTAATTGGCAGTGTGCGTGTTTGTGTGTTCGAATCACCATTCAATCGGTTAGTTGTGAACAAAGTCAGTAGAAATGTCCCTGAAACCCCAGTCCTTTTCCTTCCTATTTCGAAAAGGTGTAATCTGTACTTATCTAAATTGGCAGAAAGGATAACATAATACACACATTGGGCGAATGCGATAACTTAAGCCAACAATAATCCTAACCGTAGAATTAGTCTGCCAAAATTATAAATCTACACGCAAACCGAAAGAAAACTATATTAACATCTGGGCTGGAGAAAAAAAAACCCACTGAGGCACAACAGATCGTCGTTTACAACACAAAACAT] [+] EMBL BM588521 [CCGGAATTAGCTGCGTCGTATAATATATATAGGTGCACCGCGTGTATACTTGATGTTTGTTATTATTCAATCAACACAAAAAGCGCTAATCCCGTTGTTATTGCATTAGCCTGTAAGCACTATCCAAAAACAAAAATACCTGTTTCATCAATCGTATTCGAGGTTTTCGTGTTGTGTATAATCGACAACCGCGCCGGTATTCCAATCAGGTTTTGCTCCTTTCACAAAATTCGATTCCTTAGTGCCATGATTTTGCGGAAAGGAGACTTTAAGCGATGCAGCAATACATTTGATCGTTACTAAATCGAGATATACAAGGAAGTAATTGGCAGTGTGCGTGTTTGTGTGTTCGAATCACCATTCAATCGGTTAGTTGTGAACAAAGTCAGTAGAAATGTCCCTGAAACCCCAGTCCTTTTCCTTCCTATTTCGAAAAGGTGTAATCTGTACTTATCTAAATTGGCAGAAAGGATAACATAATACACACATTGGGCGAATGCGATAACTTAAGCCAACAATAATCCTAACCGTAGAATTAGTCTGCCAAAATTATAAATCTACACGCAAACCGAAAGAAAACTATATTAACATCTGGGCTGGAGAAAAAAAAACCCACTGAGGCACAACAGATCGTCGTTTACAACACAAAACAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9767#0 GCACATGCCTGCCTTTTGTTNGTATTTTTTTGGTTTGGTTTTCCTCCT--CTTATGCGTT 58 consensus_9767#1 ---------------ATGTTAGTACAGTTTTCTTTCGGTTTGCGTGTAGATTTATAATTT 45 consensus_9767#2 ------------------------------------------------------------ consensus_9767#3 ------------------------------------------------------------ consensus_9767#0 CACCTTATATATCCTGCCGC-ATAAAGAGAGGTGGC--GGTTTGTTCGATCTGGTTG-TC 114 consensus_9767#1 TGGCATACTAATTCTACGGTTAGGAATATTGTTGGCTTAAGTTATCGCATTCGCTCAATG 105 consensus_9767#2 ------------------------CCGGGAACCGGTCCGAGAGA-CGCGTACATCCACTA 35 consensus_9767#3 ---------------------------------------------------CCGGAATTA 9 * consensus_9767#0 TGCATTGAACACGGCTCGACCAAACGATCCGGACGGTTTTGCAATGTCTACGATGGACAT 174 consensus_9767#1 TGTGTATTATGTTATCCTTTCTGCCAATTTAGATAAGTACAGATTACACCTTTTCGAAAT 165 consensus_9767#2 GGCGCTCTG-GTGGGGC--TCTGTGGACCTGAGTAG-TGCGCGCTGTCCATGATGGCACT 91 consensus_9767#3 GCTGCGTCGTATAATATATATAGGTGCACCGCGTGTATACTTGATGTTTGTTATTATTCA 69 * * * consensus_9767#0 GGTACGCAACCGCTGGCTGAGCGGACCCGG-CATCAGTAG-GACAGTGCTGACGG-TGAG 231 consensus_9767#1 AGAAAGGAAAAG--GACTGGGTTTTCAGGGACATTTCTACTGACTTTGTTCACAA-CTAA 222 consensus_9767#2 GTAGTTCAAATC--AATTGTCGTATTCGAATGGTCGAAATAGTGTTCTTTTGCGG-CCAA 148 consensus_9767#3 ATCAACACAAAA--AGCGCTAATCCCGTTGTTATTGCATTAGCCTGTAAGCACTATCCAA 127 * * * * * consensus_9767#0 CG---CGATCCAACGGTGAA--GTCCTTATACTGCGAGAATACTGATATCTTATCCTTCA 286 consensus_9767#1 C----CGATTGAATGATGATTCGAACACACACTGCCA-ATTACTTCCTTGTATATCTCGA 277 consensus_9767#2 ATAGACGAGTGTCTTGTGTGTTGTGTATACACGAAGA-ATCGAACCAGCGCCGGTTATCA 207 consensus_9767#3 AAACAAAAATACCTGTTTCATCAATCGTATTCGAGGT------TTTCGTGTTGTGTATAA 181 * * * * * consensus_9767#0 GCTGCTGGCA--CAGCTGCAGCGCGACGGTAAACAGCACCAGCACCTCGTTCAGCCACGG 344 consensus_9767#1 TTTAGTAACGATCAAATGTATTGCTGCATCCCTTCAAATCTCCTTTCCGCAAAATCATGG 337 consensus_9767#2 TCAACGAAGG-TCGGCGGAGACAC-ACA-TACTACACCCCTGCTCCCCGTGTGCCGTTGT 264 consensus_9767#3 TCGACAACCG--CGCCGGTATTCCAATCAGGTTTTGCTCCT----TTCACAAAATTCGAT 235 * * * * * consensus_9767#0 T-ACGGAGCACTCCGCCT----GGCACGAGTCGAACTTCATCGTGC--CCTGGAAGTTGG 397 consensus_9767#1 C-ACTAAGGAATCGAATTTTGTGAAAGGAGCAAAACCTGATTGGACTACCAGCGCGGTTG 396 consensus_9767#2 TTATCGTGCTGTTGATTTT---GATAATTATCGAACCAAATTTTTGAGCAAACGCACGAG 321 consensus_9767#3 TCCTTAGTGCCATGATTTT---GCGGAAAGGAGACTTTAAGCGATGCAGCAATACAT--- 289 * * * * consensus_9767#0 TCAGCTGGTACGCGACAAAGATCAGCTTGTGGCTCTGGATGTAGAAGCTGATCGCTAAAT 457 consensus_9767#1 TCGATTA-TACACAACACGAAAACCTCGAATACGCTTGATGAAACAGGTTTTTTTTGGAT 455 consensus_9767#2 CCGGGCCGCACAAGATCACGCGGTCCAAACGGTCCAAAAACGGAACGGCCCACAGCGGGC 381 consensus_9767#3 TTGATCGTTACTAAATCGAGATATACAAGGAA---GTAATTGGCAGTGTGCGTGTTTGTG 346 ** * * consensus_9767#0 CTT-CTGGCAGGTTCG-GCGACAGCGCCTTCATGTTGCGGCTCTT-CATCAGCTCGTCGA 514 consensus_9767#1 AGTACTTACAGGCTAATGCAATAACAACGGGAT-TAGCGCTTTTTGTGTTGATTGAATAA 514 consensus_9767#2 AGTGTGGATGCGCGAC-----CGATCCAGAGGTGTTGCGTTCCCGTGTTGGGGTGATTGG 436 consensus_9767#3 TGTTCGAATCACCATT--CAATCGGTTAGTTGTGAACAAAGTCAGTAGAAATGTCCCTGA 404 * * * consensus_9767#0 TCGGCTTCTTGCGGGGCACG-ACGAGCGAGGTGCGGCCAGCGCTGCAACGCCCCTAGAAT 573 consensus_9767#1 TAACAAACATCAAGTATACACGCATTCCCAACAACACGACTGCAAGAAAATCCGTCGTA- 573 consensus_9767#2 AATTTCACGACCAGGACAAG---GTTGCAAATTGAACAAG----ATTAAACCAGGGGACG 489 consensus_9767#3 AACCCCAGTCCTTTTCCTTCCTATTTCGAAAAGGTGTAATCTGTACT-TATCTAAATTGG 463 * * consensus_9767#0 GTTGCCCAGTATG----TGCAGCACCTCGTCGGACGTTTTGAAATGGTACG---CACTGT 626 consensus_9767#1 GGGACCGGGTAGGGAGCCAGAGTATTTCCGCGAGTCTTATACAGCAGTACGGTACAGCGA 633 consensus_9767#2 GGTGTGCGGTATTCAGGTGAAAGCATTCCTTGACTGATT----GGAGGACGCTTCTTCAA 545 consensus_9767#3 CAGAAAGGATAACATAATACACACATTGGGCGAATGCGATAACTTAAGCCAAC-AATAAT 522 ** * * * * consensus_9767#0 CCACGTTGTCGATGTGGTTGATCGCCTGCTGC---AGATGGTTGGCCGCATCCT--GCAC 681 consensus_9767#1 CCGTGTGGTATATTTAACTATCCTTTTTTTTTTTTGTTTGGTTTTCCTCCTCTTATGCGT 693 consensus_9767#2 CCAGGCACTCAACTCAGCTGGCCGCAAATGTT-----GCGATTCAGCGGATCGAACTGGT 600 consensus_9767#3 CCTAACCGTAGAATTAGTCTGCCAAAATTATA------AATCTACACGCAAACCGAAAGA 576 ** * * * * * consensus_9767#0 CTGCTGTAT--CTTCCACGGGTAGTCCTGGGTGATGGAGGTGCGCTGGATCTG-TTG-CT 737 consensus_9767#1 TCACCTTAT--ATATCCTGCCGCATAAAGAGAGGTGGCGGTTTGTTCGATCTGGTTGTCT 751 consensus_9767#2 TCACCAGACC-ACACTCCCGCCGGAAGAGTGGGAAAAAAGTAAAGGTAACCTTCTCGGAC 659 consensus_9767#3 AAACTATATTAACATCTGGGCTGGAGAAAAAAAAACCCACTGAGGCACAACAGATCG-TC 635 * * * * * * * consensus_9767#0 GCTGCCGCTGCACCTTAAAGTTGATGTCCGCATG-CGTTATGCTGTCCCCGGTAAGCGTG 796 consensus_9767#1 GCATTGAACACGGCTCGACCAAACGATCCGGACGGTTTTGCAATGTCTACGATGGACAT- 810 consensus_9767#2 CAGCTCGACACG------------------------------------------------ 671 consensus_9767#3 GTTTACAACACAAAACAT------------------------------------------ 653 * consensus_9767#0 ACGATACACTTGAGCTGTTCCGGTGCGGCCGTCAGCACAAACTTGTCCTGCTTCTTGCCC 856 consensus_9767#1 --GGTACGCAACCGCTGGCTGAGCGGACCCGGCATCAGTAGG--ACAGTGCTGACGGTGA 866 consensus_9767#2 ------------------------------------------------------------ consensus_9767#3 ------------------------------------------------------------ consensus_9767#0 TCGTTACCGTACAGCGGGACCGGAAATCGGTGGGCACACTCCACCAGGATAACGTGCAGC 916 consensus_9767#1 GCGCGATCCAACGGTGAAGTCCTTATACTGCGAGAATACT--GATATCTTATCCTTCAGC 924 consensus_9767#2 ------------------------------------------------------------ consensus_9767#3 ------------------------------------------------------------ consensus_9767#0 TGCTTCAGCACCGAATGTACCTCCTCGTGTAGCACCCACTCGAATTCCACCTGCAGATTT 976 consensus_9767#1 TGCTGGCACAGCTGCAGCGCGACGGTAAACAGCACCAGCACCTCGTTCAGCCACGG---T 981 consensus_9767#2 ------------------------------------------------------------ consensus_9767#3 ------------------------------------------------------------ consensus_9767#0 AGGGCTTCCTCCTTCTCGCAGTCTGCCATCTTCTGGCCTACTTTTCGCTGTGGCGGCGGT 1036 consensus_9767#1 ACGGAGCACTCCGCCTGGCACGAGTCGAACTTC------ATCGTGCCCTG-GAAGTTGGT 1034 consensus_9767#2 ------------------------------------------------------------ consensus_9767#3 ------------------------------------------------------------ consensus_9767#0 CGCCTATTGTACGGGCCACTGCTGGCGCTCCCTACCGATGCGTAGCTGGTACCGCTCTGC 1096 consensus_9767#1 CAGCTG--GTACGCGACAAAGAT----CAGCTTGTGGCTCTGGATGTAGAAGCTGATCGC 1088 consensus_9767#2 ------------------------------------------------------------ consensus_9767#3 ------------------------------------------------------------ consensus_9767#0 CGCAAACTGCTGGTACGGTCGAACGCCGGACCCGAACGGTTCGGTGCCGCTTCCGGACTG 1156 consensus_9767#1 TA-AATCTTCTGGCAGGTTCGGCGACAGCGCCTTCATGTTGCGGCTCTTCAT-------- 1139 consensus_9767#2 ------------------------------------------------------------ consensus_9767#3 ------------------------------------------------------------ consensus_9767#0 GGCGGTACGAAGATCTGCTCCAGATAGCGCCACCGGGCCTGAGCGGAAGTGGAAGGGCTC 1216 consensus_9767#1 --CAGCTCGTCGATCGGCTTC---TTGCGGGGCACGAC--GAGCG-AGGTGCGGCCGCGC 1191 consensus_9767#2 ------------------------------------------------------------ consensus_9767#3 ------------------------------------------------------------ consensus_9767#0 GGACTCGTAGACGGCACACTGCCGTCGTCGCTGGCGGTCGTGTCGAGCTGGTCCGAGAAG 1276 consensus_9767#1 TGCAACGCACATAGAATGTTGCCCAGTAAGGCAGCA------------------------ 1227 consensus_9767#2 ------------------------------------------------------------ consensus_9767#3 ------------------------------------------------------------ consensus_9767#0 GTTACCTTTACTTTTTTCCCACTCTTCCGGCGGGAGTGTGGTCTGGTGAACCAGTTCGAT 1336 consensus_9767#1 ------------------------------------------------------------ consensus_9767#2 ------------------------------------------------------------ consensus_9767#3 ------------------------------------------------------------ consensus_9767#0 CCGCTGCGTTTTCCACACTATCACTTTTACACGTAATGATTTTTCCAGCACTCTGTTTTT 1396 consensus_9767#1 ------------------------------------------------------------ consensus_9767#2 ------------------------------------------------------------ consensus_9767#3 ------------------------------------------------------------ consensus_9767#0 TGGGGGCAAACCTTTGCTCCTTTTGCTGCTGCTGCTGCTGCCGG 1440 consensus_9767#1 -------------------------------------------- consensus_9767#2 -------------------------------------------- consensus_9767#3 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Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||