cluster # 9825

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Anopheles gambiae
cluster # 9825 cluster # 9825 Sequences # 21 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9825#0 length = 993 sequences # 10
consensus_9825#1 length = 707 sequences # 6

consensus_9825#2 length = 663 sequences # 3
consensus_9825#3 length = 346 sequences # 1
consensus_9825#4 length = 87 sequences # 1

consensusID : consensus_9825#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 993
fasta sequence

                              [CCGCCCACGCGTCCGGCTCATCGATATTTTTGCCTTAACACAATTTTATCATTGTTTTGCCTCGATGGTGTATTACTTTGTGGTGCGTTACGTTGAACCGTTATAAACTAGAGTGTAACTTTTGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGAAGAAGAAATGCGCGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGCATTTTTAGCATGAGTTGTTTGTTGGGGCTCGCAACATGGCAGGTGCTATATTTGAGACGCTACTTTATCGCGAAGAAATTAATTTAAACATGTATGCAGTTGGACTGTCTTACATCTTGATGTGGCTGCATTAAATAAATAAATAATTGAAATAACAAGTTGCATTATTCACATTTGAAGAATTTTTTAGTTCACTTTATTTTTTTATAAAGGCTTTGAACCGACCGAGTTCATTCGCCTGTTTTAATCGGTAAATTAATTCTGTACTTAAAATCGAACATCCTTTTTGGCAAGCCATTTGTGGC]

[+] EMBL BM578402             [CCGCCCACGCGTCCGGCTCATCGATATTTTTGCCTTAACACAATTTTATCATTGTTTTGCCTCTATGGTGTATTACTTTGTGGTGCGTTACGTTGAACCGTTATAAACTAGAGTGTAACTTTTGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAA                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM615467             [                ccgATCGATATTTTTGCCTTAACACAATTTTATCATTGTTTTGCCTCTATGGTGTATTACTTTGTGGTGCGTTACGTTGAACCGTTATAAACTAGAGTGTAACTTTTGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGAAGAAGAAATGCGCGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGC                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX610136             [                                        CAATTTTATCATTGTTTTGCCTCGATGGTGTATTACTTTGTGGTGCGTTACGTAGAACCGTTATAAACTAGAGTGTAACTTTCGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGAAGAAGAAATGCGCGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGCATTTTTAGCATGAGTTGTT                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX624121             [                                          ATTTTATCATTGTTTTGCCTCGATGGTGTATTACTTTGTGGTGCGTTACGTAGAACCGTTATAAACTAGAGTGTAACTTTCGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGAAGAAGAAATGCGCGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGCATTTTTAGCATGAGTTGTTTGTTGGGGCTCGCAACATGGCAGGTGCTATATTTGAGACGCTACTTT                                                                                                                                                                                                                                               ]
[+] EMBL BX629022             [                                                 CATTGTTTTGCCTCGATGGTGTATTACTTTGTGGTGCGTTACGTAGAACCGTTATAAACTAGAGTGTAACTTTCGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGAAGAAGAAATGCGCGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGCATTTTTAGCATGAGTTGTTTGTTGGGGCTCGCAACATGGCAGGTGCTATATTTGAGACGCTACTTTATCGCGAAGAAATTAATTTAAACATGTATGCAGTTGGACTGTCTTACATCTTGATGTGGCT                                                                                                                                                                                  ]
[+] EMBL BM584181             [                                                             cCGATGGTGTATTACTTTGTGGTGCGTTACGTTGAACCGTTATAAACTAGAGTGTAACTTTTGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGAAGAAGAAATGCGCGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGCATTTTTAGCATGAGTTGTTTGTTGGGGCTCGCAACATGGCAGGTGCTATATTTGAGACGCTACT                                                                                                                                                                                                                                                 ]
[+] EMBL BX621793             [                                                               tATGGTGTATTACTTTGTGGTGCGTTACGTTGAACCGTTATAAACTAGAGTGTAACTTTTGAGGAAGCAAACGTGTCAACTATTAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTANCACCTAACGCNCAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGNGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAANAGCTACGAGGGGATTGGCGAANCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGAAGAAGAAATGCGCGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGCATTTTTAGCATGANTTGTTTGTTGGGGCTCGCAACATGGCANGTGCTATATTTGAGACGCTACTTTATCGCGANGAAATTAATTTAAACATGTATGCAGNTGGACTGTCTTACATCTTGATGTGGCTGCNTTAA                                                                                                                                                                           ]
[+] EMBL BM634929             [                                                                    ccgATTACTTTGTGGTGCGTTACGTTGAACCGTTATAAACTAGAGTGTAACTTTTGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGAAGAAGAAATGCGCGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGCATTTTTAGCATGAGTTGTTTGTTGGGGCTCGCAACATGGCAGGTGCTATATTTGAGACGCTACTTTATC                                                                                                                                                                                                                                            ]
[+] EMBL BX624793             [                                                                                  GTGCGTTACGTAGAACCGTTATAAACTAGAGTGTAACTTTCGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGAAGAAGAAATGCGCGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGCATTTTTAGCATGAGTTGTTTGTTGGGGCTCGCAACATGGCAGGTGCTATATTTGAGACGCTACTTTATCGCGAAGAAATTAATTTAAACATGTATGCAGTTGGACTGTCTTACATCTTGATGTGGCTGCATTAAATAAATAAATAATTGAAATAACAAGTTGCATTATTCACATTTGAAGAATTTTTTAGTTCACTTTATTTTTTTATAAAGG                                                                                            ]
[+] EMBL BM642312             [                                                                                                                                                                                                                                                                                                                                                                                                                    ccgCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGAAGAAGAAATGCGCGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGCATTTTTAGCATGAGTTGTTTGTTGGGGCTCGCAACATGGCAGGTGCTATATTTGAGACGCTACTTTATCGCGAAGAAATTAATTTAAACATGTATGCAGTTGGACTGTCTTACATCTTGATGTGGCTGCATTAAATAAATAAATAATTGAAATAACAAGTTGCATTATTCACATTTGAAGAATTTTTTAGTTCACTTTATTTTTTTATAGAGGCTTTGAACCGACCGAGTTCATTCGCCTGTTTTAATCGGTAAATTAATTCTGTACTTAAAATCGAACATCCTTTTTGGCAAGCCATTTGTGGC]




>consensus_9825#0
CCGCCCACGCGTCCGGCTCATCGATATTTTTGCCTTAACACAATTTTATCATTGTTTTGC
CTCGATGGTGTATTACTTTGTGGTGCGTTACGTTGAACCGTTATAAACTAGAGTGTAACT
TTTGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGT
GCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAA
CGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGA
GATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACAT
ATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGA
TACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGA
AGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAGGGGATTGGCGAAGC
AGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAAT
TGTTCAAGATTTTGCATTGATGAGAAAACGGGAAGAAGAAATGCGCGACACTAACGAATC
AACAAACAGTCGAGTCCTTTTCTTTAGCATTTTTAGCATGAGTTGTTTGTTGGGGCTCGC
AACATGGCAGGTGCTATATTTGAGACGCTACTTTATCGCGAAGAAATTAATTTAAACATG
TATGCAGTTGGACTGTCTTACATCTTGATGTGGCTGCATTAAATAAATAAATAATTGAAA
TAACAAGTTGCATTATTCACATTTGAAGAATTTTTTAGTTCACTTTATTTTTTTATAAAG
GCTTTGAACCGACCGAGTTCATTCGCCTGTTTTAATCGGTAAATTAATTCTGTACTTAAA
ATCGAACATCCTTTTTGGCAAGCCATTTGTGGC

consensusID : consensus_9825#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 707
fasta sequence

                              [CCCACGCGTCCGGTTTTGCCTCTATGGTGTATTACTTTGTGGTGCGTTACGTAGAACCGTTATAAACTAGAGTGTAACTTTCGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACT-AAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGAAGAAGAAATGCGCGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGCATTTTTAGCATGAGTTGTTTGTTGGGGCTCGCAACATGGCAGGTGCTATATTTGAGACGC]

[+] EMBL BM612383             [CCCACGCGTCCGGTTTTGCCTCTATGGTGTATTACTTTGTGGTGCGTTACGTTGAACCGTTATAAACTAGAGTGTAACTTTTGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACT AAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGAAGAAGAAATGCGCGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGCATTTTTAGCATGAGTTGTTTGTTGGGGCTCGCAACATGGCAGGTGCTATATTTGAGACGC]
[+] EMBL AL694349             [                            ccgaggtnTTGTGGTGCGTTACGTAGAACCGTTAT AACTAGAGTGTAACTTTCGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGG ACTGGATGTAAAGAAAGGGATTGAAACTAAAGAGCTACGAGGGGATTGG GAAGCAG AAAAT                                                                                                                                                                                                        ]
[+] EMBL AL932117             [                                          ccgaggtaGTAGAA CGTTATAAACTACAGTGTAACTTTCGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACT AAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGAT                                                                                                                                                                          ]
[+] EMBL BX619029             [                                                                         GTAACTTTCGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCAACAAACGAACGCGATTATGTTCCGACTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CNS093J2             [                                                                                                                                                                                                                                                                                  TGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACT AAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTC                                                                                                                                               ]
[+] EMBL BX617128             [                                                                                                                                                                                                                                                                                                                                                                                             CATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACT AAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATCAAAACGGC                                                                                                                                                                                               ]




>consensus_9825#1
CCCACGCGTCCGGTTTTGCCTCTATGGTGTATTACTTTGTGGTGCGTTACGTAGAACCGT
TATAAACTAGAGTGTAACTTTCGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAA
TGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTA
TGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAA
TTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTC
GTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGT
TTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTT
ATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCT
ACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAG
AGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGAAGAAGAAA
TGCGCGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGCATTTTTAGCATGA
GTTGTTTGTTGGGGCTCGCAACATGGCAGGTGCTATATTTGAGACGC

consensusID : consensus_9825#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 663
fasta sequence

                              [CCGATTTGTTTCAATACTAAAGCCAGCTCATCGATATTTTTGCCTTAACACAATTTTATCATTGTTTTGCCTCTATGGTGTATTACTTTGTGGTGCGTTACGTTGAACCGTTATAAACTAGAGTGTAACTTTTGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGCAAGAAGAAATGCGCGACACT]

[+] EMBL BM635809             [CCGATTTGTTTCAATACTAAAGCCAGCTCATCGATATTTTTGCCTTAACACAATTTTATCATTGTTTTGCCTCTATGGTGTATTACTTTGTGGTGCGTTACGTTGAACCGTTATAAACTAGAGTGTAACTTTTGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAGGGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGCAAGAAGAAATGCGCGACACT]
[+] EMBL CNS093J1             [                  AAAGCCAGCTCATCGATATTTTTGCCTTAACACAATTTTATCATTGTTTTGCCTCTATGGTGTACTACTTTGTGGTGCGTTACGTTGAACCGTTATAAACTAGAGTGTAACTTTTGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAGGGGATTGGCGAAG AGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTA                                                                         ]
[+] EMBL BM650817             [                     GCCAGCTCATCGATATTTTTGCCTTAACACAATTTTATCATTGTTTTGCCTCTATGGTGTATTACTTTGTGGTGCGTTACGTTGAACCGTTATAAACTAGAGTGTAACTTTTGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAATTGAACAAGAAGTGGCACTGGga                                                                                                                                                                ]




>consensus_9825#2
CCGATTTGTTTCAATACTAAAGCCAGCTCATCGATATTTTTGCCTTAACACAATTTTATC
ATTGTTTTGCCTCTATGGTGTATTACTTTGTGGTGCGTTACGTTGAACCGTTATAAACTA
GAGTGTAACTTTTGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATAT
TAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGC
TAGCACCTAACGCACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTG
GTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTATGTGGTTCGTGATACCA
AGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACGTCAG
AATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGAGGAA
TTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAGGGGA
TTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGATTTGT
CCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGCAAGAAGAAATGCGCGAC
ACT

consensusID : consensus_9825#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 346
fasta sequence

                              [GCAGAATCGCCACGAGGNGATATTTTTGCCTTACACAATTTCATCATTGTTTTGCCTCGATGGTGTATTACTTTGTGGTGCGTTACGTAGAACCGTTATAAACTAGAGTGTAACTTTCGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCGACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTCATGTGGTTCGTGATACC]

[+] EMBL BX469095             [GCAGAATCGCCACGAGGNGATATTTTTGCCTTACACAATTTCATCATTGTTTTGCCTCGATGGTGTATTACTTTGTGGTGCGTTACGTAGAACCGTTATAAACTAGAGTGTAACTTTCGAGGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCGACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTCATGTGGTTCGTGATACC]




>consensus_9825#3
GCAGAATCGCCACGAGGNGATATTTTTGCCTTACACAATTTCATCATTGTTTTGCCTCGA
TGGTGTATTACTTTGTGGTGCGTTACGTAGAACCGTTATAAACTAGAGTGTAACTTTCGA
GGAAGCAAACGTGTCAACTATCAATTCTTCGTAAAATGTCTATATTAATTTTGGTGCTAT
TCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCGGCTAGCACCTAACGCGA
CAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTGCTGGTGAATATGAGATC
ACCAAAGCACCTGGCCAAAAGATTGATTCATGTGGTTCGTGATACC

consensusID : consensus_9825#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 87
fasta sequence

                              [CCGCCCACGCGTCCGAGCCAGCTCATCGATATTTTTGCCTTACCACGATTTTATCATTGGTTTGCCTCTATGGTGTATGTACTTTGT]

[+] EMBL BM630431             [CCGCCCACGCGTCCGAGCCAGCTCATCGATATTTTTGCCTTACCACGATTTTATCATTGGTTTGCCTCTATGGTGTATGTACTTTGT]




>consensus_9825#4
CCGCCCACGCGTCCGAGCCAGCTCATCGATATTTTTGCCTTACCACGATTTTATCATTGG
TTTGCCTCTATGGTGTATGTACTTTGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9825#1      ---------------------------------------------CC-CACGCGTCCG-- 12
consensus_9825#3      --------------GCAGAATCGCCACGAGGNGATATTTTTGCCTTA-CACAATTTCATC 45
consensus_9825#2      CCGATTTGTTTCAATACTAAAGCCAGCTCATCGATATTTTTGCCTTAACACAATTTTATC 60
consensus_9825#0      ----------CCGCCCACGCGTCCGGCTCATCGATATTTTTGCCTTAACACAATTTTATC 50
consensus_9825#4      ------------------------------------------------------------
                                                                                  

consensus_9825#1      ---GTTTTGCCTCTATGGTGTATTACTTTGTGGTGCGTTACGTAGAACCGTTATAAACTA 69
consensus_9825#3      ATTGTTTTGCCTCGATGGTGTATTACTTTGTGGTGCGTTACGTAGAACCGTTATAAACTA 105
consensus_9825#2      ATTGTTTTGCCTCTATGGTGTATTACTTTGTGGTGCGTTACGTTGAACCGTTATAAACTA 120
consensus_9825#0      ATTGTTTTGCCTCGATGGTGTATTACTTTGTGGTGCGTTACGTTGAACCGTTATAAACTA 110
consensus_9825#4      ------------------------------------------------------------
                                                                                  

consensus_9825#1      GAGTGTAACTTTCGAGGAAGCAAACGTGTCAACT-ATCAAT-TCTTCGTAAAATGTCTAT 127
consensus_9825#3      GAGTGTAACTTTCGAGGAAGCAAACGTGTCAACT-ATCAAT-TCTTCGTAAAATGTCTAT 163
consensus_9825#2      GAGTGTAACTTTTGAGGAAGCAAACGTGTCAACT-ATCAAT-TCTTCGTAAAATGTCTAT 178
consensus_9825#0      GAGTGTAACTTTTGAGGAAGCAAACGTGTCAACT-ATCAAT-TCTTCGTAAAATGTCTAT 168
consensus_9825#4      -----------CCGCCCACGCGTCCGAGCCAGCTCATCGATATTTTTGCCTTACCACGAT 49
                                   *   * **   ** * ** ** *** ** * ** *    *   * **

consensus_9825#1      ATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCG 187
consensus_9825#3      ATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCG 223
consensus_9825#2      ATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCG 238
consensus_9825#0      ATTAATTTTGGTGCTATTCAGTAGTACAGTAGTTCTACAAACGAACGCGATTATGTTCCG 228
consensus_9825#4      TTTATCATTGGTTTGCCTCTATGGTGTATGTACTTTGT---------------------- 87
                       ***   *****     **  * **  *     * *                        

consensus_9825#1      GCTAGCACCTAACGC-ACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTG 246
consensus_9825#3      GCTAGCACCTAACGCGACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTG 283
consensus_9825#2      GCTAGCACCTAACGC-ACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTG 297
consensus_9825#0      GCTAGCACCTAACGC-ACAAAAATGCCTGAGAGACGAAATGCACGGCAATCAAATTGTTG 287
consensus_9825#4      ------------------------------------------------------------
                                                                                  

consensus_9825#1      CTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATT-ATGTGGTTCGTGAT 305
consensus_9825#3      CTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATTCATGTGGTTCGTGAT 343
consensus_9825#2      CTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATT-ATGTGGTTCGTGAT 356
consensus_9825#0      CTGGTGAATATGAGATCACCAAAGCACCTGGCCAAAAGATTGATT-ATGTGGTTCGTGAT 346
consensus_9825#4      ------------------------------------------------------------
                                                                                  

consensus_9825#1      ACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACG 365
consensus_9825#3      ACC--------------------------------------------------------- 346
consensus_9825#2      ACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACG 416
consensus_9825#0      ACCAAGGGGCACATATTGGCACAAAAGGAAGACATTTCTAAAGGAAAATTTTCGTTTACG 406
consensus_9825#4      ------------------------------------------------------------
                                                                                  

consensus_9825#1      TCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGA 425
consensus_9825#3      ------------------------------------------------------------
consensus_9825#2      TCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGA 476
consensus_9825#0      TCAGAATTATATGATACATTTGAAATCTGTTTCATTTCTCAAGTACCGTCAACTTATAGA 466
consensus_9825#4      ------------------------------------------------------------
                                                                                  

consensus_9825#1      GGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAG 485
consensus_9825#3      ------------------------------------------------------------
consensus_9825#2      GGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAG 536
consensus_9825#0      GGAATTGAACAAGAAGTGGCACTGGATGTAAAGAAAGGGATTGAAACTAAGAGCTACGAG 526
consensus_9825#4      ------------------------------------------------------------
                                                                                  

consensus_9825#1      GGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGAT 545
consensus_9825#3      ------------------------------------------------------------
consensus_9825#2      GGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGAT 596
consensus_9825#0      GGGATTGGCGAAGCAGCAAAATTAAAACCGCTAGAAGTGGATTTGAAACGATTAGAGGAT 586
consensus_9825#4      ------------------------------------------------------------
                                                                                  

consensus_9825#1      TTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGG-AAGAAGAAATGCG 604
consensus_9825#3      ------------------------------------------------------------
consensus_9825#2      TTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGGCAAGAAGAAATGCG 656
consensus_9825#0      TTGTCCGATGCAATTGTTCAAGATTTTGCATTGATGAGAAAACGGG-AAGAAGAAATGCG 645
consensus_9825#4      ------------------------------------------------------------
                                                                                  

consensus_9825#1      CGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGCATTTTTAGCATGAGTTG 664
consensus_9825#3      ------------------------------------------------------------
consensus_9825#2      CGACACT----------------------------------------------------- 663
consensus_9825#0      CGACACTAACGAATCAACAAACAGTCGAGTCCTTTTCTTTAGCATTTTTAGCATGAGTTG 705
consensus_9825#4      ------------------------------------------------------------
                                                                                  

consensus_9825#1      TTTGTTGGGGCTCGCAACATGGCAGGTGCTATATTTGAGACGC----------------- 707
consensus_9825#3      ------------------------------------------------------------
consensus_9825#2      ------------------------------------------------------------
consensus_9825#0      TTTGTTGGGGCTCGCAACATGGCAGGTGCTATATTTGAGACGCTACTTTATCGCGAAGAA 765
consensus_9825#4      ------------------------------------------------------------
                                                                                  

consensus_9825#1      ------------------------------------------------------------
consensus_9825#3      ------------------------------------------------------------
consensus_9825#2      ------------------------------------------------------------
consensus_9825#0      ATTAATTTAAACATGTATGCAGTTGGACTGTCTTACATCTTGATGTGGCTGCATTAAATA 825
consensus_9825#4      ------------------------------------------------------------
                                                                                  

consensus_9825#1      ------------------------------------------------------------
consensus_9825#3      ------------------------------------------------------------
consensus_9825#2      ------------------------------------------------------------
consensus_9825#0      AATAAATAATTGAAATAACAAGTTGCATTATTCACATTTGAAGAATTTTTTAGTTCACTT 885
consensus_9825#4      ------------------------------------------------------------
                                                                                  

consensus_9825#1      ------------------------------------------------------------
consensus_9825#3      ------------------------------------------------------------
consensus_9825#2      ------------------------------------------------------------
consensus_9825#0      TATTTTTTTATAAAGGCTTTGAACCGACCGAGTTCATTCGCCTGTTTTAATCGGTAAATT 945
consensus_9825#4      ------------------------------------------------------------
                                                                                  

consensus_9825#1      ------------------------------------------------
consensus_9825#3      ------------------------------------------------
consensus_9825#2      ------------------------------------------------
consensus_9825#0      AATTCTGTACTTAAAATCGAACATCCTTTTTGGCAAGCCATTTGTGGC 993
consensus_9825#4      ------------------------------------------------