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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9862#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 21 consensus length = 1248 fasta sequence
[CCGCGGACGCGTGGGGAAAAATTGGTGCAAAGTTGTGTTCTTCTACTGGTGGTTGCTGGAAATTTTTCTCGTCCTAGCAAAAGAGTCGTGCAAATCCGCTGGTTGTTCTGCACGCGATGGCCGAACTACTGATTGACCCCAACATCCGCGGATGGGTGTTTTTGCCCATCGTTGTAATCACGTTTCTGGTAGGAATCATCCGGCACTACTTCTCCATCCTGATATCGTCGCAGAAAAAGGCG-GAACTTACCCAGATCCAGGACAGCCAGGCGATGATCCGTGCGCGGTTACTGCGCGAAAACGGCAAATACCTGTCG-CAGCA-GTCGTTCGCGATGCGCAGACACTACTTCAACAACGAGGATACGGGCTACTTCAAGACCCAGAAGCGAGCGCCACCCAGCCCGAACTCGACGGCAATGCTGTCGGATCTGGTGAAGGGGAACTTCATCAACGTACTGCCCATGATTGTGATCGGCGGATGGATCAATTGGATG-TTTTCGGGCTTTGTAACCACGAAGGTGCCGTTCCCGCTGACCCTTCGCTTTAAGCCGATGTTGCAGCGAGGCATCGAACTCGCCTCCCTTGATGCTGCCTGGGTATCGTCCGCCTCGTGGTACTTCCTGAACGTGTTCGGCCTGCGGAGTATCTACACACTCGTGCTGGGTGAAAATAATGCGGCCGATCAAACACAATCGATGCAGGATCAGATGTCGGGCGCTGCTGTAGCCATGCCACAAGACCCGAAAGCTGCCTTCAAGGCGGAATGGGAGGCACTGCAGATCACGGAGTATCAAAATGTTCTAGCAAACGTGGAAAGCGAGCTACTGGCCAGTAGTGGTTTGGCCGGCGACC-AGACAGGCGCACCTTCTTTGCTTCAGTCCAGTCGAGGCGAGGACAGTTCCGCCCTACGGAATTAGTGTGAAGGTCTGTAGCAAATACATTTAC-CGACTA-TTTGTTTTAGAACGCGTGGCAAGTCAAAGACAGTGGCAAGGCGGGTGTGGGGCGATTTTAGAAGAGTAAATCCGTTCCCTTTTGTTTCACTCTTAGACCAAGGTTTTCCTTATAGAACAGCTGGCATAAGGCTCTAGTGCAAACAGTTTAACAAAATGGCATGGAGTCATTCGTAAGGAGTTGGTAGTTAAATGAATTATTTAAGTCAACTGTAAAGCGAAC-GCTTTGCC-A-GTACTAACT-CTTCGTTAATACGATGCAAAGCGATACGA-GAAATAAAAAAAAGAACAACACAAAAAA]
[+] EMBL BM596112 [CCGCGGACGCGTGGGGAAAAATTGGTGCAAAGTTGTGTTCTTCTACTGGTGGTTGCTGGAAATTTTTCTCGTCCTAGCAAAAGAGTCGTGCAAATCCGCTGGTTGTTCTGCACGCGATGGCCGAACTACTGATTGACCCCAACATCCGCGGATGGGTGTTTTTGCCCATCGTTGTAATCACGTTTCTGGTAGGAATCATCCGGCACTACTTCTCCATCCTGATATCGTCGCAGAAAAAGGCG GAACTTACCCAGATCCAGGACAGCCAGGCGATGATCCGTGCGCGGTTACTGCGCGAAAACGGCAAATACCTGTCG CAGCA GTCGTTCGCGATGCGCAGACACTACTTCAACAACGAGGATACGGGCTACTTCAAGACCCAGAAGCGAGCGCCACCCAGCCCGAACTCGACGGCAATGCTGTCGGATCTGGTGAAGGGGAACTTCATCAACGTACTGCCCATGATTGTGATCGGCGGATGGATCAATTGGATG TTTTCGGGCTTCGTAACCACGAAGGTGCCGTTCCCGCTGACCCTGCGCTTTAAGCCGATGTTGCAGCGAGG ]
[+] EMBL CNS08K3U [ tggttttGGGAAAATTGGTGCAAAGTTGTGTTCTTCTACTGGTGGTTGCTGGAAATTTTTCTCGTCCTAGCAAAAGAGTCGTGCAAATCCGCTGGTTGTTCTGCACGCGATGGCCGAACTACTGATTGACCCCAACATCCGCGGATGGGTGTTTTTGCCCATCGTCGTGATCACGTTTCTGGTAGGAATCATCCGGCACTACTTCTCCATCCTGATATCGTCGCAGAAAAAGGCG GAACTTACCCAGATCCAGGACAGCCAGGCGATGATCCGTGCGCGGTTACTGCGCGAAAACGGCAAGTACCTGTCG CAGCA GTCGTTCGCGATGCGCAGACACTACTTCAACAACGAGGATACGGGCTACTTCAAGACCCAGAAGCGAGCGCCACCCAGCCCGAACTCGACGGCAATGCTGTCGGATCTGGTGAAGGGGAACTTCATCAACGTACTGCCCATGATTGTGATCGGCGGATGGATCAATTGGATG TTTTCGGGCTTTGTAACCACGAAGGTGCCGTTCCCGCTGACCCTTCGCTTTAAGCCGATGTTTTAGCGAGGCATCGAACTCGCCTCCCTTGATG ]
[+] EMBL BM619626 [ ccGAAAAATTGGTGCAAAGTTGTGTTCTTCTACTGGTGGTTGCTGGAAATTTTTCTCGTCCTAGCAAAAGAGTCGTGCAAATCCGCTGGTTGTTCTGCACGCGATGGCCGAACTACTGATTGACCCCAACATCCGCGGATGGGTGTTTTTGCCCATCGTTGTAATCACGTTTCTGGTAGGAATCATCCGGCACTACTTCTCCATCCTGATATCGTCGCAGAAAAAGGCG GAACTTACCCAGATCCAGGACAGCCAGGCGATGATCCGTGCGCGGTTACTGCGCGAAAACGGCAAATACCTGTCG CAGCA GTCGTTCGCGATGCGCAGACACTAC ]
[+] EMBL BX619816 [ ggatAATTGGTGCAAAGTTGTGTTCTTCTACTGGTGGTTGCTGGAAATTTTTCTCGTCCTAGCAAAAGAGTCGTGCAAATCCGCTGGTTGTTCTGCACGCGATGGCCGAACTACTGATTGACCCCAACATCCGCGGATGGGTGTTTTTGCCCATCGTTGTAATCACGTTTCTGGTAGGAATCATCCGGCACTACTTCTCCATCCTGATATCGTCGCAGAAAAAGGCG GAACTTACCCAGATCCAGGACAGCCAGGCGATGATCCGTGCGCGGTTACTGCGCGAAAACGGCAAATACCTGTCGCCAGCA GTCGT ]
[+] EMBL CNS08MOU [ tcGTGC AAGTTGTGTTCTTCTACTGGTGGTTGCTGGAAATTTTTCTCGTCCTAGCAAAAGAGTCGTGCAAATCCGCTGGTTGTTCTGCACGCGATGGCCGAACTACTGATTGACCCCAACATCCGCGGATGGGTGTTTTTGCCCATCGTCGTGATCACGTTTCTGGTAGGAATCATCCGGCACTACTTCTCCATCCTGATATCGTCGCAGAAAAAGGCG GAACTTACCCAGATCCAGGACAGCCAGGCGATGATCCGTGCGCGGTTACTGCGCGAAAACGGCAAGTACCTGTCG CAGCA GTCGTTCGCGATGCGCAGACACTACTTCAACAACGAGGATACGGGCTACTTCAAGACCCAGAAGCGAGCGCCACCCAGCCCGAACTCGACGGCAATGCTGTCGGATCTGGTGAAGGGGAACTTCATCAACGTACTGCCCATGATTGTGATCGGCGGATGGATCAATTGGATG TTTTCGGGCTTTGTAACCACGAAGGTGCCGTTCCCGCTGACCCTTCGCTTTAAGCCGATGTTGCAGCGAGGCATCGAACTCGCCTCCCTTGATGCTGCCTGGGTATCGTCCGCCTCGTGGTACTTCCTGAACGTGTTCGGCCTGCGGAGTATCTACACACTCGTGCTGGGTGAAAATAATGCGGCCGATCAAACACAATCGATGCAGGATCAGATGTCGGGCGCTGCTGTAGCCATGCCACAAGACC ]
[+] EMBL BX604598 [ TGCAAAGTTGTGTTCTTCTACTGGTGGTTGCTGGAAATTTTTCTCGTCCTAGCAAAAGAGTCGTGCAAATCCGCTGGTTGTTCTGCACGCGATGGCCGAACTACTGATTGACCCCAACATCCGCGGATGGGTGTTTTTGCCCATCGTCGTGATCACGTTTCTGGTAGGAATCATCCGGCACTACTTCTCCATCCTGATATCGTCGCAGAAAAAGGCG GAACTTACCCAGATCCAGGACAGCCAGGCGATGATCCGTGCGCGGTTACTGCGCGAAAACGGCAAGTACCTGTCG CAGCA GTCGTTCGCGATGCGCAGACACTACTTCAACAACGAGGATACGGGCTACTTCAAGACCCAGAAGCGAGCGCCACCCAGCCCGAACTCGACGGCAATGCTGTCGGATCTGGTGAAGGGGGACTTCATCAACGTACTGCCCATGATTGTGATCGGCGGATGGATCAATTGGATGTTTTTCGGGCTTTGTAACCACGAAGGTGCCGTTCCCGCTGAACCTTCGCTTTAAGCCGATGTTGCAGCGAGGCATCGAACTCGCCTCCCTTGATGCTGCCTGGGTATCGTCCGCC ]
[+] EMBL CNS08MHY [ GTGTTCTTCTACTGGTGGTTGCTGGAAATTTTTCTCGTCCTAGCAAAAGAGTCGTGCAAATCCGCTGGTTGTTCTGCACGCGATGGCCGAACTACTGATTGACCCCAACATCCGCGGATGGGTGTTTTTGCCCATCGTCGTGATCACGTTTCTGGTAGGAATCATCCGGCACTACTTCTCCATCCTGATATCGTCGCAGAAAAAGGCG GAACTTACCCAGATCCAGGACAGCCAGGCGATGATCCGTGCGCGGTTACTGCGCGAAAACGGCAAGTACCTGTCG CAGCA GTCGTTCGCGATGCGCAGACACTACTTCAACAACGAGGATACGGGCTACTTCAAGACCCAGAAGCGAGCGCCACCCAGCCCGAACTCGACGGCAATGCTGTCGGATCTGGTGAAGGGGAACTTCATCAACGTACTGCCCATGATTGTGATCGGCGGATGGATCAATTGGATG TTTTCGGGCTTTGTAACCACGAAGGTGCCGTTCCCGCTGACCCTTCGCTTTAAGCCGATGTTGCAGCGAGGCATCGAACTCGCCTCCCTTGATGCTGCCTGGGTATCGTCCGCCTCGTGGTACTTCCTGAACGTGTTCGGCCTGCGGAGTATCTACACACTCGTGCTGGGTGAAAATAATGCGGCCGATCAAACACAATCGATGCAGGATCAGATGTCGGGCGCTGCTGTAGCCATGCCACAAGACCCGAAAGCTGCCTTCAAGGCGGAATGGGAGGCACTGCAGATCACGGAGTATCAAAATGTTCTAGCAAACGTGGAAAGCGAGCTACTGGCCAGTAGTGGTTTGGCCGGCGACC AGACAGGCGCACCTTCTTTGCTTCAGTCCAGTCGAGGCGAGGACAGTTCCGCCCTACGGAATTAGTGTGAAGGTCTGTAGCAAATACATTTAC CGACTA T ]
[+] EMBL CNS08QEJ [ TTCTGCTGGTGGTTGCTGGAAATTTTTCTCGTCCTAGCAAACGAGCCGTGCAAATTCGCTAGTTGTTCTGCACGCGATGGCCGAACTACTGATTGACCCTAACATCCGCGGATGGGTGTTTTTGCCCATCGTTGTAATCACGTTTCTGGTAGGAATCATCCGGCACTACTTCTCCATCCTGATATCGTCGCAGAAAAAGGCG GAACTTACCCAGATCCAGGACAGCCAGGCGATGATCCGTGCGCGGTTACTGCGCGAAAACGGCAAATACCTGTCG CGGCA GTCGTTCGCGATGCGCAGACACTACTTTAACAACGAGGATACGGGCTACTTCAAGACCCAGAAGCGAGCGCCACCCAGCCCGAACTCGACGGCAATACTGTCGGATCTGGTGAAGGGGAACTTCATCAACGTACTGCCCATGATTGTGATCGGCGGATGGATCAATTGGATG TTTTCGGGCTTTGTAACCACGAAGGTGCCGTTCCCGCTAACCCTCCGCTTTAAGCCGATGTTGCAGCGAGGCATCGAACTCGCCTCCCTTGATGCTGCCTGGGTATCGTCCGCCTCGTGGTACTTCCTGAACGTGTTCGGCCTGCGGAGTATCTACACACTCGTGCTGGGTGAAAATAATGCGGCCGATCAAACACAATCGATGCAGGATCAGATGTCGGGCGCTGCTGTAGCCATGCCGCAAGACCCGAAAGCAGCCTTCAAGGCGGAATGGGAGGCACTGCAGATCACGGAGTATCAAAATGTTCTAGCAAACGTGGAAAGCGAGCTACTGGCCAGTAGTGGTTTGGCCGGCGACC AAACAGGtg ]
[+] EMBL CNS08DV0 [ CTACTGGTGGTTGCTGGAAATTTTTCTCGTCCTAGCAAAAGAGTCGTGCAAATCCGCTGGTTGTTCTGCACGCGATGGCCGAACTACTGATTGACCCCAACATCCGCGGATGGGTGTTTTTGCCCATCGTCGTGATCACGTTTCTGGTAGGAATCATCCGGCACTACTTCTCCATCCTGATATCGTCGCAGAAAAAGGCGCGAACTTACCCAGATCCAGGACAGCCAGGCGATGATCCGTGCGCGGTTACTGCGCGAAAACGGCAAGTACCTGTCG CAGCACCCCCCCCGCGATGCGCAGACACTACTTCAACAACGAGGATACGGGCTACTTCAAGAACCAGAAGCGAGCGCCACCCAGCCCGAACTCGACGAAAATGCTGTCGGATCTGGTGAAGGGGAACTTCATCAACGTACTGCCCATGATTGTGATCGGCGGATGGATCAATTGGATG TTTTCGGGCTTTGTAACCACGAAGGTGCCGTTCCCGCTGACCCTTCGCTTTAAGCCGATGTTGCAGCGAGGCATCGAACTCGCCTCCCTTGATGCTGCCTGGGTATCGTCCGCCTCGTGGTACTTCCTGAACGTGTTCGGCCTGCGGAGTATCTACACACTCGTGCTGGGTGAAAATAATGCGGCCGATCAAACACAATCGATGCAGGATCAGGTGTCGGGCGCTGCTGTAGCCATGCCACAAGACCCGAAAGCCGCCTCCAAGGCGGAATGGGAGGCACTGCAGATCACGGAGTATCAAAATGTTCTAGCAAACGTGGAAAGCGAGCTACTGGCCAGTAGTGGTTTGGCCGGCGACC AGACAGGCGCACCTTCTTTGCTTCAGTCCAGTCGAGGCGAGGACAGTTCCGCCCTACGGAATTAGTGTGAAGGTCTGTAGCAAATACATTTAC CGACTATTTTGTTTTAGAACGCGTGGCAAGTCAAAGACAGTGGCAAGGCGGG ]
[+] EMBL BM625424 [ ccgGCTGGAAATTTTTCTCGTCCTAGCAAAAGAGTCGTGCAAATCCGCTGGTTGTTCTGCACGCGATGGCCGAACTACTGATTGACCCCAACATCCGCGGATGGGTGTTTTTGCCCATCGTTGTAATCACGTTTCTGGTAGGAATCATCCGGCACTACTTCTCCATCCTGATATCGTCGCAGAAAAAGGCG GAACTTACCCAGATCCAGGACAGCCAGGCGATGATCCGTGCGCGGTTACTGCGCGAAAACGGCAAATACCTGTCG CAGCA GTCGTTCGCGATGCGCAGACACTACTTCAACAACGAGGATACGGGCTACTTCAAGACCCAGAAGCGAGCGCCACCCAGCCCGAACTCGACGGCAATGCTGTCGGATCTGGTGAAGGGGAACTTCATCAACGTACTGCCCATGATTGTGATCGGCGGATGGATCAATTGGATG TTTTCGGGCTTCGTAACCACGAAGGTGCCGTTCCCGCTGACCCTGCGCTTTAAGCCGATGTTGCAGCGAGGCATCGAACTCGCCTCCCTTGATGCTGCCTGGGTATCGTCCGCCTCGTGGTACTTCCTGAACGTGTTCGGCCTGCGGAGTATCTACACACTCGTGCTGGGTGAAAATAATGCTGCCGATCAAACACA ]
[+] EMBL BX625704 [ GGAAATTTTTCTCGTCCTAGCAAAAGAGTCGTGCAAATCCGCTGGTTGTTCTGCACGCGATGGCCGAACTACTGATTGACCCCAACATCCGCGGATGGGTGTTTTTGCCCATCGTTGTAATCACGTTTCTGGTAGGAATCATCCGGCACTACTTCTCCATCCTGATATCGTCGCAGAAAAAGGCG GAACTTACCCAGATCCAGGACAGCCAGGCGATGATCCGTGCGCGGTTACTGCGCGAAAACGGCAAATACCTGTCG CAGCA GTCGTTCGCGATGCGCAGACACTACTTCAACAACGAGGATACGGGCTACTTCAAGACCCAGAAGCGAGCGCCACCCAGCCCGAACTCGACGGCAATGCTGTCGGATCTGGTGAAGGGGAACTTCATCAACGTACTGCCCATGATTGTGATCGGCGGATGGATCAATTGGATG TTTTCGGGCTTCGTAACCACGAAGGTGCCGTTCCCGCTGACCCTGCGCTTTAAGCCGATGTTGCAGCGAGGCATCGAACTCGCCTCCCTTGATGCTGCCTGGGTATCGTCCGCCTCGTGGTACTTCCTGAACGTGTTCGGCCTGCGGAGTATCTACACACTCGTGCTGGGTGAAAATAATGCTGCCGATCAAACACAATCGATGCAGGATCAGATGTCGGGCGCTGCTGTAGCCATGCCACAAGACCCGAAAGCTGCCTTCAAGGCGGAATGGGAGGCACTGCAGATCACGGAGTATCAAAATGTTCTAGCAAACGTGGAAAGCGAGCT ]
[+] EMBL AGA282511 [ TGATTGACCCCAACATCCGCGGATGGGTGTTTTTGCCCATCGTTGTAATCACGTTTCTGGTAGGAATCATCCGGCACTACTTCTCCATCCTGATATCGTCGCAGAAAAAGGCG GAACTTACCCAGATCCAGGACAGCCAGGCGATGATCCGTGCGCGGTTACTGCGCGAAAACGGCAAATACCTGTCG CAGCA GTCGTTCGCGATGCGCAGACACTACTTCAACAACGAGGATACGGGCTACTTCAAGACCCAGAAGCGAGCGCCACCCAGCCCGAACTCGACGGCAATGCTGTCGGATCTGGTGAAGGGGAACTTCATCAACGTACTGCCCATGATTGTGATCGGCGGATGGATCAATTGGATG TTTTCGGGCTTCGTAACCACGAAGGTGCCGTTCCCGCTGACCCTGCGCTTTAAGCCGATGTTGCAGCGAGGCATCGAACTCGCCTCCCT ]
[-] EMBL CNS08DV1 [ AGGCGATGATCCGTGCGCGGTTACTGCGCGAAAACGGCAAGTACCTGTCG CAGCA GTCGTTCGCGATGCGCAGACACTACTTCAACAACGAGGATACGGGCTACTTCAAGACCCAGAAGCGAGCGCCACCCAGCCCGAACTCGACGGAAATGCTGTCGGTTCTGGTGAAGGGGAACTTCATCAACGTACTGCCCATGATTGTGATCGGCGGATGGATCAATTGGATG TTTTCGGGCTTTGTAACCACGAAGGTGCCGTTCCCGCTGACCCTTCGCTTTAAGCCGATGTTGCAGCGAGGCATCGAACTCGCCTCCCTTGATGCTGCCTGGGTATCGTCCGCCTCGTGGTACTTCCTGAACGTGTTCGGCCTGCGGAGTATCTACACACTCGTGCTGGGTGAAAATAATGCGGCCGATCAAACACAATCGATGCAGGATCAGGTGTCGGGCGCTGCTGTAGCCATGCCACAAGACCCGAAAGCCGCCTCCAAGGCGGAATGGGAGGCACTGCAGATCACGGAGTATCAAAATGTTCTAGCAAACGTGGAAAGCGAGCTACTGGCCAGTAGTGGTTTGGCCGGCGACC AGTTAGGCGCACCTTCTTTGCTTCAGTCCAGTCGAGGCGAGGACAGTTCCG CCTACGGAATTAGTGTGAAGGTCTGTAGCAAATGGGGGGGCGCGACTA TTTGTTTTAGAACGCGTGGCAAGTCAAAGACAGTGGCAAGGCGGGTGTGGGGCGATTTTAGAAGAGTAAATCCGTTCCCTTTTGTTTCACTCTTAGACCAAGGTTTTCCTTATAGAACAGCTGGCATAAGGCTCTAGTGCAAACAGTTTAACAAAATGGCATGGAGTCATTCGTAAGGAGTTGGTAGTTAAATGAATTATTTAAGTCAACTGTAAAGCGAACGGCTTTGCC AGGTACTAACT ATCGTTAATACGATGC AAGCGATACGA Gg ]
[-] EMBL CNS08MHZ [ GTTCGCGATGCGCAGACACTACTTCAACAACGAGGATACGGGCTACTTCAAGACCCAGAAGCGAGCGCCACCCAGCCCGAACTCGACGGCAATGCTGTCGGATCTGGTGAAGGGGAACTTCATCAACGTACTGCCCATGATTGTGATCGGCGGATGGATCAATTGGATG TTTTCGGGCTTTGTAACCACGAAGGTGCCGTTCCCGCTGACCCTTCGCTTTAAGCCGATGTTGCAGCGAGGCATCGAACTCGCCTCCCTTGATGCTGCCTGGGTATCGTCCGCCTCGTGGTACTTCCTGAACGTGTTCGGCCTGCGGAGTATCTACACACTCGTGCTGGGTGAAAATAATGCGGCCGATCAAACACAATCGATGCAGGATCAGATGTCGGGCGCTGCTGTAGCCATGCCACAAGACCCGAAAGCTGCCTTCAAGGCGGAATGGGAGGCACTGCAGATCACGGAGTATCAAAATGTTCTAGCAAACGTGGAAAGCGAGCTACTGGCCAGTAGTGGTTTGGCCGGCGACC AGACAGGCGCACCTTCTTTGCTTCAGTCCAGTCGAGGCGAGGACAGTTCCG CCTACGGAATTAGTGTGAAGGTCTGTAGCAAATACATTTAC CGACTA TTTGTTTTAGAACGCGTGGCAAGTCAAAGACAGTGGCAAGGCGGGTGTGGGGCGATTTTAGAAGAGTAAATCCGTTCCCTTTTGTCTCACTCTTAGACCAAGGTTTTCCTTATAGAACAGCTGGCATAAGGCTCTAGTGCAAACAGTTTAACAAAATGGCATGGAGTCATTCGTAAGGAGTTGGTAGTTAAATGAATTATTTAAGTCAACTGTAAAGCGAAC GCTTTGCC AGGTACTAACT CTTCGTTAATACGATGCAAAGCGATACGA GAAATAAA ]
[+] EMBL BX610061 [ CAGACACTACTTCAACAACGAGGAAACGGGCTACTTCAAGACCCAGAAGCGAGCGCCACCCAGCCCGAACTCGACGGCAAGGCTGTCGGAACTGGTGAAGGGGAACTTCATCAAC ]
[-] EMBL CNS08MOV [ GGATGGATCAATTGGATGTTTTTCGGGCTTTGTAACCACGAAGGTGCCGTTCCCGCTGACCCTTCGCTTTAAGCCGATGTTGCAGCGAGGCATCGAACTCGCCTCCCTTGATGCTGCCTGGGTATCGTCCGCCTCGTGGTACTTCCTGAACGTGTTCGGCCTGCGGAGTATCTACACACTCGTGCTGGGTGAAAATAATGCGGCCGATCAAACACAATCGATGCAGGATCAGATGTCGGGCGCTGCTGTAGCCATGCCACAAGACCCGAAAGCTGCCTTCAAGGCGGAATGGGAGGCACTGCAGATCACGGAGTATCAAAATGTTCTAGCAAACGTGGAAAGCGAGCTACTGGCCAGTAGTGGTTTGGCCGGCGACC AGACAGGCGCACCTTCTTTGCTTCAGTCCAGTCGAGGCGAGGACAGTTCCG CCTACGGAATTAGTGTGAAGGTCTGTAGCAAATACATTTAC CGACTA TTTGTTTTAGAACGCGTGGCAAGTCAAAGACAGTGGCAAGGCGGGTGTGGGGCGATTTTAGAAGAGTAAATCCGTTCCCTTTTGTTTCACTCTTAGACCAAGGTTTTCCTTATAGAACAGCTGGCATAAGGCTCTAGTGCAAACAGTTTAACAAAATGGCATGGAGTCATTCGTAAGGAGTTGGTAGTTAAATGAATTATTTAAGTCAACTGTAAAGCGAAC GCTTTGCC A GTACTCACT ATTC ]
[+] EMBL BX622394 [ TCGTCCGCCTCGTGGTACTTCCTGAACGTGTTCGGCCTGCGGAGTATCTACACACTCGTGCTGGGTGAAAATAATGCTGCCGATCAAACACAATCGATGCAGGATCAGATGTCGGGCGCTGCTGTAGCCATGCCACAAGACCCGAAAGCTGCCTTCAAGGCGGAATGGGAGGCACTGCAGATCACGGAGTATCAAAATGTTCTAGCAAACGTGGAAAGCGAGCTACTGGCCAGTAGTGGTTTGGCCGGCGACC AAACAGGCGCACCTTCATTGCTTCAGTCCAGTCGAGGCGAGGACAGTTCCGCCCTTCGGAATTAGTGTGAAGGTCTGTAGCAAATACATTTAC CGATTA TTTGTTTTAGAACGCGTGGCAAGTCAAAGACAGTGGCAAGGCGGGTGTGGGGCGATTTTAGCAGAGTAAATCCGTT CCTTTTGTTTCACTCTTAGACCAAGGTTTTCCTTATAGAACAGCTGGCATAAGGCTCTAGTGCAGACAGTTTAACAAAATGGCATGGAGTCATTCGTAAGGAGTTGGTAGTTAAATGAATTATTTAAGTCAACTGTAAAGCGAACGGCTTTGCCAA GTACTAACTACTTCGTTAATACGATGCAAAGCGATACGA Gg ]
[-] EMBL AGA280878 [ GCACTGCAAATCACGGAGTATCAAAATGTTCTGGCAAACGTGGAAAGCGAGCTACTGGCCAGTAGTGGTTTGGCCGGCGACC AAACAGGCGCACCTTCATTGCTTCAGTCCAGTCGAGGCGAGGACAGTTCCGCCCTTCGGAATTAGTGTGAAGGTCTGTAGCAAATACATTTAC CGATTA TTTGTTTTAGAACGCGTGGCAAGTCAAAGACAGTGGCAAGGCGGGTGTGGGGCGATTTTAGCAGAGTAAATCCGTT CCTTTTGTTTCACTCTTAGACCAAGGTTTTCCTTATAGAACAGCTGGCATAAGGCTCTAGTGCAGACAGTTTAACAAAATGGCATGGAGTCATTCGTAAGGAGTTGGTAGTTAAATGAATTATTTAAGTCAACTGTAAAGCGAACGGCTTTGCCAA GTACTAACTACTTCGTTAATACGATGCAAAGCGATACGAGGAAATAAAAAAAAGAACAACACAAAAAA]
[-] EMBL CNS08K3V [ ACGGAGTATCAAAATGTTCTAGCAAACGTGGAAAGCGAGCTACTGGCCAGTAGTGGTTTGGCCGGCGACC AAACAGGCGCACCTTCTTTGCTTCAGTCCAGTCGAGGCGAGGACAGTTCCG CCTACGGAATTAGTGTGAAGGTCTGTAGCAAATACATTTAC CGACTA TTTGTTTTAGAACGCGTGGCAAGTCAAAGACAGTGGCAAGGCGGGTGTGGGGCGATTTTAGAAGAGTAAATCCGTTCCCTTTTGTTTCACTCTTAGACCAAGGTTTTCCTTATAGAACAGCTGGCATAAGGCTCTAGTGCAAACAGTTTAACAAAATGGCATGGAGTCATTCGTAAGGAGTTGGTAGTTAAATGAATTATTTAAGTCAACTGTAAAGCGAAC GCTTTGCC AGGTACTAACT ]
[-] EMBL CNS08QEK [ ATGTTCTAGCAAACGTGGAAAGCGAGCTACTGGCCAGTAGTGGTTTGGCCGGCGACCAAAAAAGGTGCACCTTCATTGCTTCAGTCCAGTCGAGGCGAGGACAGTTCCG CCTACGGAATTAGTGTGAAGGTCTGTAGCAAATACATTTAC CGACTA TTTGTTTTAGAACGCGTGGCAAGTCAAAGACAGTGGCAAGGCGGGTGTGGGGCGATTTTAGCAGAGTAAATCCGTT CCTTTTGTTTCACTCTTAGACCAAGGTTTTCCTTATAGAACAGCTGGCATAAGGCTCTAGTGCAGACAGTTTAACAAAATGGCATGGAGTCATTCGTAAGGAGTTGGTAGTTAAATGAATTATTTAAGTCAACTGTAAAGCGAAC GCTTTGCC AGGTACTAACT ATTCGTTAATACGATGCAAAGCGATACGAGGAAATAAAAAA ]
[+] EMBL BM652163 [ ccGGTTTGGCCGGCGAGC AGACAGGCGCACCTTCTTTGCTTCAGTCCAGTCGAGGCGAGGACAGTTCCGCCCTACGGAATTAGTGTGAAGGTCTGTAGCAAATACTTTTAC CGACTA TTTGTTTTAGAACGCGTGGCAAGTCAAAGACAGTGGCAAGGCGGGTGTGGGGCGATTTTCGAAGAGTAAATCCGTTCCCTTTTGTTTCACTCTTAGACCAAGGTTTTCCTTATAGAACAGCTGGCATAAGGCTCTAGTGCAGACAGTTTAACAAAATGGCATGGAGTCATTCGTAAGGAGTTGGTAGTTAAATGAATTATTAAAGTCAACTGTAAAGCGAACGGCTTTGCCAA GTACTAACTACTTCGTTAATACGATGCAAAGCGATACGAGGAAATAAAAAAAAGAACAACACtgt ]
consensusID : consensus_9862#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 850 fasta sequence
[AATTGCCCGAGGTTATTCTAATGGTGGTTGNTGGCAATTTTTCTCGTCCTAACAAAAGAGTCGTGCAAATCCGCTGGTTGTTCTTGCACGCGATGGCGAACTACTGATTGAACCCAACATCCGCGGATGGGTGTTTTTTGCCCATCGTTGTAATCACGTTTCTGGTAGGAATCATCCGGCACTACTTCTCCATCCTGATATCGTCGCAGAAAAAGGCGGAACTTACCCAGATCCAGGACAGCCAGGCGATGATCCGTGCGCGGTTACTGCGCGAAAACGGCAAATACCTGTCGCAGCAGTCGTTCGCGATGCGCAGACACTACTTCAACAACGAGGATACGGGCTACTTCAAGACCCAGAAGCGAGCGCCACCAGCCCGAACTCGACGGCAATGCTGTCGGATCTGGTGAAGGGGAACTTCATCAACGTACTGCCCATGATTGTGATCGGCGGATGGATCAATTGGNTGTTCTCGGGCTTCGTAACCACGAAGGTGCCGTTCCCGCTGACCCTGCGCTTTAAGCCGATGTTGCAGGAGGCATCAGAACTCGCTCCCTTGATGCTGCTGGGTATCGTACAGCTCGTGGTACTTCCTGAACGTGTTCGGGCTGCCGGGAGTATCTACACANCTCCGTGCTGGGTGACAAAATAGTGCTGCCGCTTCAAAANCAAANATCGAATGCCAGGATTCACGAATGTCACGGCGCTGCTGTACCCNATGNCCACAAGANCCCGAAGNGCTGGCTTCAGCNGTAATTGGGANNGCATTGTAGAANCACNGAGTNTTCCAAAGGNTNAACGNCAAAGTAGCAACCCACATATGGCCANATGGTGGCGGNACACAAGGCAC]
[+] EMBL AL931032 [AATTGCCCGAGGTTATTCTAATGGTGGTTGNTGGCAATTTTTCTCGTCCTAACAAAAGAGTCGTGCAAATCCGCTGGTTGTTCTTGCACGCGATGGCGAACTACTGATTGAACCCAACATCCGCGGATGGGTGTTTTTTGCCCATCGTTGTAATCACGTTTCTGGTAGGAATCATCCGGCACTACTTCTCCATCCTGATATCGTCGCAGAAAAAGGCGGAACTTACCCAGATCCAGGACAGCCAGGCGATGATCCGTGCGCGGTTACTGCGCGAAAACGGCAAATACCTGTCGCAGCAGTCGTTCGCGATGCGCAGACACTACTTCAACAACGAGGATACGGGCTACTTCAAGACCCAGAAGCGAGCGCCACCAGCCCGAACTCGACGGCAATGCTGTCGGATCTGGTGAAGGGGAACTTCATCAACGTACTGCCCATGATTGTGATCGGCGGATGGATCAATTGGNTGTTCTCGGGCTTCGTAACCACGAAGGTGCCGTTCCCGCTGACCCTGCGCTTTAAGCCGATGTTGCAGGAGGCATCAGAACTCGCTCCCTTGATGCTGCTGGGTATCGTACAGCTCGTGGTACTTCCTGAACGTGTTCGGGCTGCCGGGAGTATCTACACANCTCCGTGCTGGGTGACAAAATAGTGCTGCCGCTTCAAAANCAAANATCGAATGCCAGGATTCACGAATGTCACGGCGCTGCTGTACCCNATGNCCACAAGANCCCGAAGNGCTGGCTTCAGCNGTAATTGGGANNGCATTGTAGAANCACNGAGTNTTCCAAAGGNTNAACGNCAAAGTAGCAACCCACATATGGCCANATGGTGGCGGNACACAAGGCAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9862#0 CCGCGGACGCGTGGGGAAAAATTGGTGCAAAGTTGTGTTCTTCTACTGGTGGTTGCTGGA 60
consensus_9862#1 -------------------AATTG-CCCGAGGTTAT-----TCTAATGGTGGTTGNTGGC 35
***** * * *** * **** ********* ***
consensus_9862#0 AATTTTTCTCGTCCTAGCAAAAGAGTCGTGCAAATCCGCTGGTTGTTCT-GCACGCGATG 119
consensus_9862#1 AATTTTTCTCGTCCTAACAAAAGAGTCGTGCAAATCCGCTGGTTGTTCTTGCACGCGATG 95
**************** ******************************** **********
consensus_9862#0 GCCGAACTACTGATTGACCCCAACATCCGCGGATGGGTGTTTTT-GCCCATCGTTGTAAT 178
consensus_9862#1 GC-GAACTACTGATTGAACCCAACATCCGCGGATGGGTGTTTTTTGCCCATCGTTGTAAT 154
** ************** ************************** ***************
consensus_9862#0 CACGTTTCTGGTAGGAATCATCCGGCACTACTTCTCCATCCTGATATCGTCGCAGAAAAA 238
consensus_9862#1 CACGTTTCTGGTAGGAATCATCCGGCACTACTTCTCCATCCTGATATCGTCGCAGAAAAA 214
************************************************************
consensus_9862#0 GGCGGAACTTACCCAGATCCAGGACAGCCAGGCGATGATCCGTGCGCGGTTACTGCGCGA 298
consensus_9862#1 GGCGGAACTTACCCAGATCCAGGACAGCCAGGCGATGATCCGTGCGCGGTTACTGCGCGA 274
************************************************************
consensus_9862#0 AAACGGCAAATACCTGTCGCAGCAGTCGTTCGCGATGCGCAGACACTACTTCAACAACGA 358
consensus_9862#1 AAACGGCAAATACCTGTCGCAGCAGTCGTTCGCGATGCGCAGACACTACTTCAACAACGA 334
************************************************************
consensus_9862#0 GGATACGGGCTACTTCAAGACCCAGAAGCGAGCGCCACCCAGCCCGAACTCGACGGCAAT 418
consensus_9862#1 GGATACGGGCTACTTCAAGACCCAGAAGCGAGCGCCACC-AGCCCGAACTCGACGGCAAT 393
*************************************** ********************
consensus_9862#0 GCTGTCGGATCTGGTGAAGGGGAACTTCATCAACGTACTGCCCATGATTGTGATCGGCGG 478
consensus_9862#1 GCTGTCGGATCTGGTGAAGGGGAACTTCATCAACGTACTGCCCATGATTGTGATCGGCGG 453
************************************************************
consensus_9862#0 ATGGATCAATTGGATGTTTTCGGGCTTTGTAACCACGAAGGTGCCGTTCCCGCTGACCCT 538
consensus_9862#1 ATGGATCAATTGGNTGTTCTCGGGCTTCGTAACCACGAAGGTGCCGTTCCCGCTGACCCT 513
************* **** ******** ********************************
consensus_9862#0 TCGCTTTAAGCCGATGTTGCAGCGAGGCATC-GAACTCGCCTCCCTTGATGCTGCCTGGG 597
consensus_9862#1 GCGCTTTAAGCCGATGTTGCAG-GAGGCATCAGAACTCGC-TCCCTTGATGCTGC-TGGG 570
********************* ******** ******** ************** ****
consensus_9862#0 TATCGTCCGCCTCGTGGTACTTCCTGAACGTGTTCGGCCTGC--GGAGTATCTACACACT 655
consensus_9862#1 TATCGTACAGCTCGTGGTACTTCCTGAACGTGTTCGGGCTGCCGGGAGTATCTACACANC 630
****** * *************************** **** **************
consensus_9862#0 --CGTGCTGGGTGA--AAATAATGCGGCCGAT-CAAACACAATCGATG-----CAGGAT- 704
consensus_9862#1 TCCGTGCTGGGTGACAAAATAGTGCTGCCGCTTCAAAANCAAANATCGAATGCCAGGATT 690
************ ***** *** **** * **** *** * ******
consensus_9862#0 --CAGATGTCG-GGCGCTGCTGTAGCCAT--GCCACAAGACCC--GAAAGCTGCCTTCAA 757
consensus_9862#1 CACGAATGTCACGGCGCTGCTGTACCCNATGNCCACAAGANCCCGAAGNGCTGGCTTCAG 750
* ***** ************ ** ******** ** * **** *****
consensus_9862#0 GGCGGAATGGGAGG-CACTGCAGA-TCACGGAGTAT--CAAAATGTTCTAGCAAACGTGG 813
consensus_9862#1 CNGTAATTGGGANNGCATTGTAGAANCACNGAGTNTTCCAAAGGNTNAACGNCAAAGTAG 810
* ***** ** ** *** *** **** * **** * * ** ** *
consensus_9862#0 AAAGCGAGCTACTGGCCAGTAGTGGTTTGGCCGGCGACCAGACAGGCGCACCTTCTTTGC 873
consensus_9862#1 CAACCCACATA-TGGCCA--NATGG--TGGCGGNACACAAGGCAC--------------- 850
** * * ** ****** *** **** * ** ** **
consensus_9862#0 TTCAGTCCAGTCGAGGCGAGGACAGTTCCGCCCTACGGAATTAGTGTGAAGGTCTGTAGC 933
consensus_9862#1 ------------------------------------------------------------
consensus_9862#0 AAATACATTTACCGACTATTTGTTTTAGAACGCGTGGCAAGTCAAAGACAGTGGCAAGGC 993
consensus_9862#1 ------------------------------------------------------------
consensus_9862#0 GGGTGTGGGGCGATTTTAGAAGAGTAAATCCGTTCCCTTTTGTTTCACTCTTAGACCAAG 1053
consensus_9862#1 ------------------------------------------------------------
consensus_9862#0 GTTTTCCTTATAGAACAGCTGGCATAAGGCTCTAGTGCAAACAGTTTAACAAAATGGCAT 1113
consensus_9862#1 ------------------------------------------------------------
consensus_9862#0 GGAGTCATTCGTAAGGAGTTGGTAGTTAAATGAATTATTTAAGTCAACTGTAAAGCGAAC 1173
consensus_9862#1 ------------------------------------------------------------
consensus_9862#0 GCTTTGCCAGTACTAACTCTTCGTTAATACGATGCAAAGCGATACGAGAAATAAAAAAAA 1233
consensus_9862#1 ------------------------------------------------------------
consensus_9862#0 GAACAACACAAAAAA 1248
consensus_9862#1 ---------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||