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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9973#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 23 consensus length = 1165 fasta sequence
[AGATTCGGCA-GNGGCTCGTTCCACGCCGCCAGCACCCGAGAGCACC-GGAATCCACCACAAGAAATCCAGCTCTAAAATGGTCCAAATAGATGAAAGCAAAGTGGCCGCCATCGGCGA-CGTGTTAAACAACCGTG-ACCGACCACTGAAGGAACGATTCCGCGCGCTG-TTCACTTTGCGCAACATCGGTGGCGAGCGTGCGCTCGAGTCCATCGGCCGGTGTTTCGATGACGAATCGGCCCTGCTCAAGCACGAGCTGGCCTACTGTCTGGGGCAGATGCAGGACGTCCGAGCCATTCCCGTGCTCACGAAAGTGCTTGCCGA-TG-TGCAGCA-GGAAG-CGATGGTGCGCCACGAGGCGGCCGAAGCACTGGGCGCGATCGGCGACAGT-TCGGTCGAGGACACGCT-GGTCAGC-TAC-AGCAA-GGA-CCCGG-TCGTGGAGGTAGCGGAAACGTGCGAA-ATTGC-A-CTGGAGCGTGTGCGATGGTTGAAGCAGAAGGAAGCACTGAAGGACGACAACCCGTACGCCTCGGTCGACCCAACGCCGCCGGCCACTTCCAAG-AGCGTCGAGGAGCTGCAGCG-A-ATTCTGATGGACGAGGCGGACACGCTGTTTAACCGGTA-CCGGGCCATG-TTTGCGCTGCGCAATCTGCGCACGGAGGAGGC-AACGCTCGCGCTGGCCAGCGGGCTAAAGGGCAAGAGTGCACTGTTCCGGCACGAGGTGGCGTTCGTGCTGGGGCAGCTGCAGGAGGAGTGCAGTGTGCCGTTTTTGGTGGAAAACTTGCGCGATCCGGCGGAAAACGAAATGGTACGGCATGAGTGCGCGG-AAGCGCTTGGCGCGA-TTGCGACGGACGAGTGTACGCGCGTGCTGAACGAGTATCTGAAGGACGAAAAGCGCGTGGTAAAGGAGAGCTGCGAGGTGGCGCTCGATATGTGCGAATACGAGAACAGTCCCGAGTTTCAGTACGCCGACACGCTGGTTAAGGTAAACGATGGACAATGAGCGAGATTCACGTGCAGTGTGTACATAAAGACACAGGGGAAAAACAAAATCACAGGCAACACAGGTGAGGTTGAACACCGAAAGCTGTTAATCTGCGCTTTCCCTACAAATCTTACTGCTGTA-TTTTTTTATGATAAGGTTTGGCAAAGGAAATAAAAGTACGATGAAAATTTATCA]
[+] EMBL BX468459 [AGATTCGGCACGNGG TCGTT CACGCCGCCAGCA CCGAGAGCA C GGAATCCACCACAAGAAATCCAGCTCTAAAATGGTCCAAATAGAT AAAGCAAAGTGGCCGCCATCGGCGA CGTGTTAAACAACCGTG ACCGACCACTGAAGGAACGATTCCGCGCGCTG TTCACTTTGCGCAACATCGGTGGCGAGCGTGCGCTCGAGTCCATCGGCCGGTGTTTCGATGACGAATCGGCCCTGCTCAAGCACGAGCTGGCCTACTGTCTGGGGCAGATGCAGGACGTCCGAGCCATTCCCGTGCTCACGAAAGTGCTTGCCGA T TGCAGCA GGAAGTGGATGGTGCGCCACGAGGCGGCCGAAGCACTGGGCGCGATCGGCGACAGT TCGGTCGAGGACACGCT GG ]
[+] EMBL BM620363 [ ccGCTAGTTCTAGATCGC GATCCCGAGAGCACC GGAATCCACCACAAGAAATCCAGCTCTAAAATGGTCCAAATAGATGAAAGCAAAGTGGCCGCCATCGGCGA CGTGTTAAACAACCGTG ACCGACCACTGAAGGAACGATTCCGCGCGCTG TTCACTTTGCGCAACATCGGTGGCGAGCGTGCGCTCGAGTCCATCGGCCGGTGTTTCGATGACGAATCGGCCCTGCTCAAGCACGAGCTGGCCTACTGTCTGGGGCAGATGCAGGACGTCCGAGCCATTCCCGTGCTCACGAAAGTGCTTGCCGA TG TGCAGCA GGAAG CGATGGTGCGCCACGAGGCGGCCGAAGCACTGGGCGCGATCGGCGACAGT TCGGTCGAGGACACGCT GGTCAGC TAC AGCAA GGA CCCGG TCGTGGAGGTAGCGGAAACGTGCGAA ATTGC A CTGGAGCGTGTGCGATGGTTGAAGCAGAAGGAAGCACTGAAGGACGACAACCCGTACGCCTCGGTCGACCCAACGCCGCCGGCCACTTCCAAGAAGCGTCGAGGAGCTGCAGCG A ATTCTGATGGACGAGGCGGACACGCTGTTTAACCGGTACCCGGGCCATG TTTGCGCTGCGCAATCTGCGCACGGAGGAGGC AACGCTC ]
[+] EMBL CNS09NYV [ gtgaaTCGTTCCACGCCGCCAGCACCCGAGAGCACC GGAATCCACCACAAGAAATCCAGCTCTAAAATGGTCCAAATAGATGAAAGCAAAGTGGCCGCCATCGG GATCGTGTTAAACAACCGTG ACCGACCACTGAAGGAACGATTCCGCGCGCTG TTCACTTTGCGCAACATCGGTGGCGAGCGTGCGCTCGAGTCCATCGGCCGGTGTTTCGATGACGAATCGGCCCTGCTCAAGCACGAGCTGGCCTACTGTCTGGGGCAGATGCAGGACGTCCGAGCCATTCCCGTGCTCACGAAAGTGCTTGCCGA TG TGCAGCA GGAAG CGATGGTGCGCCACGAGGCGGCCGAAGCACTGGGCGCGATCGGCGACAGT TCGGTCGAGGACACGCT GGTCAGC TAC AGCAA GGA CCCGG TCGTGGAGGTAGCGGAAACGTGCGAA ATTGC A CTGGAGCGTGTGCGATGGTTGAAGCAGAAGGATGCACTGAAGGACGACAACCCGTACGCCTCGGTCGACCCAACGCCGCCGGCCACTTCCAAG AGCGTCGAGGAGCTGCAGCG ACATTCTGATGGACGAGGCGGACACGCTGTTTAACCGGTA CCGGGCCATG TTTGCACTGCGCAATCTGCGCACGGAGGAGGC AACGCTCGCGCTGGCCAGCGGGCTAAAGGGCAAGAGTGCACTGTTCCGGCACGAGGTGGCGTTCGTCCTGGGGCAGCTGCAGGAGGAGTGCAGTGTGCCGTTTTTGGTGGAAAACTTGCGCGATCCGGCGGAAAACGAAATGGTACGGCATGAGTGCGCGG AAGCTTTTGGCG GACTTGCGACGGACGAGTGTACGCGCGTGCTGAACGAGTATCTGAAGGACGAAAAGCGCGTGGTA ]
[+] EMBL CNS09KXR [ CGTTCCACGCCGCCAGCACCCGAGAGCACC GGAATCCACCACAAGAAATCCAGCTCTAAAATGGTCCAAATAGATGAAAGCAAAGTGGCCGCCATCGG GATCGTGTTAAACAACCGTG ACCGACCACTGAAGGAACGATTCCGCGCGCTG TTCACTTTGCGCAACATCGGTGGCGAGCGTGCGCTCGAGTCCATCGGCCGGTGTTTCGATGACGAATCGGCCCTGCTCAAGCACGAGCTGGCCTACTGTCTGGGGCAGATGCAGGACGTCCGAGCCATTCCCGTGCTCACGAAAGTGCTTGCCGA TG TGCAGCA GGAAG CGATGGTGCGCCACGAGGCGGCCGAAGCACTGGGCGCGATCGGCGACAGT TCGGTCGAGGACACGCT GGTCAGC TAC AGCAA GGA CCCGG TCGTGGAGGTAGCGGAAACGTGCGAA ATTGC A CTGGAGCGTGTGCGATGGTTGAAGCAGAAGGATGCACTGAAGGACGACAACCCGTACGCCTCGGTCGACCCAACGCCGCCGGCCACTTCCAAG AGCGTCGAGGAGCTGCAGCG A ATTCTGATGGACGAGGCGGACACGCTGTTTAACCGGTA CCGGGCCATG TTTGCGCTGCGCAATCTGCGCACGGAGGAGGC AACGCTCGCGCTGGCCAGCGGGCTAAAGGGCAAGAGTGCACTGTTCCGGCACGAGGTGGCGTTCGTCCTGGGGCAGCTGCAGGAGGAGTGCAGTGTGCCGTTTTTGGTGGAAAACTTGCGCGATCCGGCGGAAAACGAAATGGTACGGCATGAGTGCGCGG AAGCTCTTGGCGCGACTTGCGACGGACGAGTGTACGCGCGTGCTGAACGAGTATCTGAA ]
[+] EMBL BM584526 [ ccgCGTTCCACGCCGCCAGCACCCGAGAGCACC GGAATCCACCACAAGAAATCCAGCTCTAAAATGGTCCAAATAGATGAAAGCAAAGTGGCCGCCATCGGCGA CGTGTTAAACAACCGTG ACCGACCACTGAAGGAACGATTCCGCGCGCTG TTCACTTTGCGCAACATCGGTGGCGAGCGTGCGCTCGAGTCCATCGGCCGGTGTTTCGATGACGAATCGGCCCTGCTCAAGCACGAGCTGGCCTACTGTCTGGGGCAGATGCAGGACGTCCGAGCCATTCCCGTGCTCACGAAAGTGCTTGCCGA TG TGCAGCA GGAAG CGATGGTGCGCCACGAGGCGGCCGAAGCACTGGGCGCGATCGGCGACAGT TCGGTCGAGGACACGCT GGTCAGC TAC AGCAA GGA CCCGG TCGTGGAGGTAGCGGAAACGTGCGAA ATTGC A CTGGAGCGTGTGCGATGGTTGAAGCAGAAGGAAGCACTGAAGGACGACAACCCGTACGCCTCGGTCGACCCAACGCCGCCGGCCACTTCCAAG AGCGTCGAGCAGCTGCAGCG A ATTCTGATGGACGAGGCGGACACGCTGTTTAACCGGTA CCGGGCCATG TTTGCGC ]
[+] EMBL CNS09NXM [ TTCCACGCCGCCAGCACCCGAGAGCACCGGGGATCCACCACAAGAAATCCAGCCCTAAAATGGTCCAAATAGATGAAAGCAAAGTGGCCGCCATCGGGAA CGTGTTAAACAACCGTG ACCGACCGCTGAAGGAACGATTCCGCGCGCTG TTCACTTTGCGCAACATCGGTGGCGAGCGTGCGCTCGAGTCCATCGGCCGGTGTTTCGATGACGAATCGGCCCTGCTCAAACACGAGCTGGCCTACTGTCTGGGGCAGATGCAGGACGTCCGAGCCATTCCCGTGCTCACGAAAGTGCTTGCCGA TG TGCAGCA GGAAG CGATGGTGCGCCACGAGGCGGCCGAAGCACTGGGCGCGATCGGCGACAGT TCGGTCGAGGACACGCT GGTCAGC TAC AGCAA GGA CCCGG TCGTGGAGGTAGCGGAAACGTGCGAA ATTGC A CTGGAGCGTGTGCGATGGTTGAAGCAGCAGGAAGCACTGAAGGACGACAACCCGTACGCCTCGGTCGACCCAACACCGCCGGCCACTTCCAAG AGCGTCGAGGAGCTGCAGCG A ATTCTGATGGACGAGGCGGACACGCTGTTCAACCGGTA CCGGGCCATG TTTGCGCTGCGCAATC ]
[+] EMBL BX604102 [ CCACGCCGCCAGCACCCGAGAGCACC GGAATCCACCACAAGAAATCCAGCTCTAAAATGGTCCAAATAGATGAAAGCAAAGTGGCCGCCATCGGCGA CGTGTTAAACAACCGTG ACCGACCACTGAAGGAACGATTCCGCGCGCTG TTCACTTTGCGCAACATCGGTGGCGAGCGTGCGCTCGAGTCCATCGGCCGGTGTTTCGATGACGAATCGGCCCTGCTCAAGCACGAGCTGGCCTACTGTCTGGGGCAGATGCAGGACGTCCGAGCCATTCCCGTGCTCACGAAAGTGCTTGCCGA TG TGCAGCA CGAAG CGATGGTGCGCCACGAGGCGGCCGAAGCACTGGGCGCGATCGGCGACAGT TCGGTCGAGGACACGCT GGTCAGC TAC AGCAA GGA C ]
[+] EMBL CNS08Z7X [ CCGCCAGCACCCGAGAGCACG GGGAT CACCACAAGAAATCCAGCCCTAAAATGGTCCAAATAGATGAAAGCAAAGTGGCCGCCATCGG AT CGTGTTAAACAACCGTG ACCGACCGCTGAAGGAACGATTCCGCGCGCTG TTCACTTTGCGCAACATCGGTGGCGAGCGTGCGCTCGAGTCCATCGGCCGGTGTTTCGATGACGAATCGGCCCTGCTCAAGCACGAGCTGGCCTACTGTCTGGGGCAGATGCAGGACGTCCGAGCCATTCCCGTGCTCACGAAAGTGCTTGCCGA TG TGCAGCA GGAAG CGATGGTGCGCCACGAGGCGGCCGAAGCACTGGGCGCGATCGGCGACAGT TCGGTCGAGGACACGCT GGTCAGC TAC AGCAA GGA CCCGG TCGTGGAGGTAGCGGAAACGTGCGAA ATTGC A CTGGAGCGTGTGCGATGGTTGAAGCCCCCGGAAGCACTGAAGGACGACAACCCGTACGCCTCGGTCGACCCAACACCGCCGGCCACTTCCAAG AGCGTCGAGGAGCTGCAGCGAA ATTCTGATGGACGAGGCGGACACGCTGTTCAACCGGTA CCGGGCCATG TTTGCGCTGCGCAATCTGCGCACGGAGGAGGC AACGCTCGCGCTGGCCAGCGGGCTAAAGGGCAAGAGTGCACTGTTCCGGCACGAGGTGGCGTTCGTGCTGGGGCAGCTGCAGGAGGAGTGCAGTGTGCCGTTTTTGGTGGAAAACTTGCGCGATCCGGCGGAAAACGAAATGGTACGGCATGAGTGCGCGG AAGC TTTGGGCCGATTTGCGACGGACGAGTGTACGCGCGTGCTGAACGAGTATCTGAAGGACGAAAAGCGCGTGGTAAAGGAGAGCTGCGAGGTGGCGCTCGATATGTGCGAATACGAGAACAGTTCCGAGTTTCAGTACGCCGACACGCTGGTTAAGGTAAGCGATGGACAA ]
[+] EMBL BM586010 [ ccgCCCGAGAGCACC GGAATCCACCACAAGAAATCCAGCCCTAAAATGGTCCAAATAGATGAAAGCAAAGTGGCCGCCATCGGCGA CGTGTTAAACAACCGTG ACCGACCACTGAAGGAACGATTCCGGGCGCTG TTCACTTTGCGCAACATCGGTGGCGAGCGTGCGCTCGAGTCCATCGGCCGGTGTTTCGATGACGAATCGGCCCTGCTCAAGCACGAGCTGGCCTACTGTCTGGGGCAGATGCAGGACGTCCGGGCCATTCCCGTGCTCACGAAAGTGCTTGCCGA TG TGCAGCA GGAAG CGATGGTGCGCCACGAGGCGGCCGAAGCACTCGGCGCGATCGGCGACAGC TCGGTCGAGGACACGCT GGTCAGC TAC AGCAA GGA CCCGG TCGTGGAGGTAGCGGAAACGTGCGAA ATTGC A CTGGAGCGTGTGCGATGGTTGAAGCAGAAGGAAGCACTGAAGGACGACAACCCGTACGCCTCGGTCGACCCAACGCCGCCGGCCACTTCCAAG AGCGTCGAGGAGCTGCAGCG A ATTCTGATGGACGAGGCGGACACGCTGTTCAACCGGTA CCGGGCCATG TTTGCGCTGCGCAATCTGCGCACGGAGGAGGC AACGCTCGCGCTGGCCAGCGGGCTAAAGGGCAAGAGTGCACTGTTCCGGCACGAGGTGGCGTTCGTGCTGGGGCAGCTGCAGGAGGAGTG ]
[+] EMBL CNS09FY7 [ CACCGGGGAT CACCACAAGAAATCCAGCCCTAAAATGGTCCAAATAGATGAAAGCAAAGTGGCCGCCATCGG GA CGTGTTAAACAACCGTG ACCGACCGCTGAAGGAACGATTCCGCGCGCTG TTCACTTTGCGCAACATCGGTGGCGAGCGTGCGCTCGAGTCCATCGGCCGGTGTTTCGATGACGAATCGGCCCTGCTCAAGCACGAGCTGGCCTACTGTCTGGGGCAGATGCAGGACGT CGAGCCATTCCCGTGCTCACGAAAGTGCTTGCCGATTGTTGCAGCA GGAAG CG ]
[+] EMBL CNS096K7 [ CACCGGGGATCCACCACAAGAAATCCAGCCCTAAAATGGTCCAAATAGATGAAAGCAAAGTGGCCGCCATCGGCGA CGTGTTAAACAACCGTG ACCGACCGCTGAAGGAACGATTCCGCGCGCTG TTCACTTTGCGCAACATCGGTGGCGAGCGTGCGCTCGAGTCCATCGGCCGGTGTTTCGATGACGAATCGGCCCTGCTCAAGCACGAGCTGGCCTACTGTCTGGGGCAGATGCAGGACGTCCGAGCCATTCCCGTGCTCACGAAAGTGCTTGCCGA TG TGCAGCA GGCCG CGATGGTGC ]
[+] EMBL CNS08KW2 [ ACCACAAGAAATCCAGCCCTAAAATGGTCCAAATAGATGAAAGCAAAGTGGCCGCCATCGG GA CGTGTTAAACAACCGTG ACCGACCGCTGAAGGAACGATTCCGCGCGCTG TTCACTTTGCGCAACATCGGTGGCGAGCGTGCGCTCGAGTCCATCGGCCGGTGTTTCGATGACGAATCGGCCCTGCTCAAGCACGAGCTGGCCTACTGTCTGGGGCAGATGCAGGACGTCCGAGCCATTCCCGTGCTCACGAAAGTGCTTGCCGA TG TGCAGCA GGAAG CGATGGTGCGCCACGAGGCGGCCGAAGCACTGGGCGCGATCGGCGACAGT TCGGTCGAGGACACGCT GGTCAGC TAC AGCAA GGA CCCGG TCGTGGAGGTAGCGGAAACGTGCGAA ATTGC A CTGGAGCGTGTGCGATGGTTGAAGCAGAAGGAAGCACTGAAGGACGACAACCCGTACGCCTCGGTCGACCCAACACCGCCGGCCACTTCCAAG AGCGTCGAGGAGCTGCAGCG A ATTCTGATGGACGAGGCGGACACGCTGTTCAACCGGTA CCGGGCCATG TTTGCGCTGCGCAATCTGCGCACGGAGGAGGC AACGCTCGCGCTGGCCAGCGGGCTAAAGGGCAAGAGTGCACTGTTCCGGCACGAGGgt ]
[+] EMBL BX468806 [ gCAAG AATCC GCAC GANNGGGT CAAATAGATGAAAGC AAGTGGCCGCCATCGGCGA CGTGTTAAACAACCGTG ACCGACCACTGAAGGAACGATTCCGCGCGCTG TTCACTTTGCGCAACATCGGTGGCGAGCGTGCGCTCGAGTCCATCGGCCGGTGTTTCGATGACGAATCGGCCCTGCTCAAGCACGAGCTGGCCTACTGTCTGGGGCAGATGCAGGACGTCCGAGCCATTCCCGTGCTCACGAAAGTGCTTGCCGA TG TGCAGCAGGGAAG CGATGGTGCGCCACGAGGCGGCCGAAGCACTGGGCGCGATCGGCGACAGTCTCGGTCGAGGACACGCTAGGTCAGCGTACNAGCAAGGGA CCCGGNTCGTGGAGGTAGCGGAAACGTGCGAANATNGCGACCTGG ]
[+] EMBL CNS093IU [ CAAATAGATGAAAGCAAAGTGGCCGCCATCGGCGA CGTGTTAAACAACCGTG ACCGACCGCTGAAGGAACGATTCCGCGCGCTGCTTCACTTTGCGCAACATCGGTGGCGAGCGTGCGCTCGAGTCCATCGGCCGGTGTTTCGATCACGAATCGGCCCTGCTCAAGCACGAGCTGGCCTACTGTCTGGGGCAGATGCAGGACGTCCGAGCCATTCCCGTGCTCACGAAAGTGCTTGCCGA TG TGCAGCA GGAAG CGATGGTGCGCCACGAGGCGGCCGAAGCACTGGGCGCGATCGGCGACAGT TCGGTCGAGGACACGCT GGTCAGC TAC AGCAA GGACCCCGG TCGTGGAGGTAGCGGAAACGTGCGAA ATTGC A CTGGAGCGTGTGCGATGGTTGAAGCAGAAGGAAGCACTGAAGGACGACAACCCGTACGCCTCGGTCGACCCAACACCGCCGGCCACTTCCAAG AGCGTCGAGGAGCTGCAGCG A ATTCTGATGGACGAGGCGGACACGCTGTTCAACCGGTA CCGGGCCATG TTTGCGCTGCGCAATCTGCGCACGGAGGAGGC AACGCTCGCGCTGGCCAGCGGGCTAAAGGGCAAGAGTGCACTGTTCCGGCACGAGGTGGCGTTCGTGCTGGGGCAGCTGCAGGAGGAGTGCAGTGTGCCGTTTTTGGTGGAAAACTTGCGCGATCCGGCGGAAAACGAAATGGTACGGCATGAGTGCGCGG AAGCTTTGGGCCCAA TTGCGACGGACGAGTGTACGCGCGTGCTGAACGAGTATCTGAAGGACGAAAAGCGCGTGGTAAAGGAGAGCTGCGAGGTGGCGCTCGATATGTGCGAATACGAGAACAGTCCCGAGTTTCAGTACGCCGACACGCTGGTTAAGGTAAACGATGGAC ]
[+] EMBL CNS094WL [ ACAACCGTGCACCGACCGCTGAAGGAACGATTCCGCGCGCTG TTCACTTTGCGCAACATCGGTGGCGAGCGTGCGCTCGACTCCATCGGCCGGTGTTTCGATGACGAATCGGCCCTGCTCAAGCACGAGCTGGCCTACTGTCTGGCGCAGATGCAGGACGTCCGACCCATTCCCGTGCTCACGACAGTCCTTGCCGA TG TGC ]
[-] EMBL CNS093IV [ GTCCATCGGCCGGTGTTTCGATGACGAATCGGCCCTGCTCAAGCACGAGCTGGCCTACTGTCTGGGGCAGATGCAGGACGTCCGAGCCATTCCCGTGCTCACGAAAGTGCTTGCCGA TG TGCAGCA GGAAG CGATGGTGCGCCACGAGGCGGCCGAAGCACTGGGCGCGATCGGCGACAGT TCGGTCGAGGACACGCT GGTCAGC TAC AGCAA GGA CCCGG TCGTGGAGGTAGCGGAAACGTGCGAA ATTGC A CTGGAGCGTGTGCGATGGTTGAAGCAGAAGGAAGCACTGAAGGACGACAACCCGTACGCCTCGGTCGACCCAACACCGCCGGCCACTTCCAAG AGCGTCGAGGAGCTGCAGCG A ATTCTGATGGACGAGGCGGACACGCTGTTCAACCGGTA CCGGGCCATG TTTGC CTGCGCAATCTGCGCACGGAGGAGGC AACGCTCGCGCTGGCCAGCGGGCTAAAGGGCAAGAGTGCACTGTTCCGGCACGAGGTGGCGTTCGTGCTGGGGCAGCTGCAGGAGGAGTGCAGTGTGCCGTTTTTGGTGGAAAACTTGCGCGATCCGGCGGAAAACGAAATGGTACGGCATGAGTGCGCGG AAGCGCTTGGCGCGA TTGCGACGGACGAGTGTACGCGCGTGCTGAACGAGTATCTGAAGGACGAAAAGCGCGTGGTAAAGGAGAGCTGCGAGGTGGCGCTCGATATGTGCGAATACGAGAACAGTCCCGAGTTTCAGTACGCCGACACGCTGGTTAAGGTAAACGATGGACAATGAGCGAGATTCACGTGCAGTGTGTACATAAAGACACAGGGGAAAAACAAAATCACAGGCAACACAGGTGAGGTTGAACACCGAAAGCTGTTAATCTGCGCTTTCCCTACAAATCTTACTGCTGTA TTTTTTTATGATAAGGTTTGGCAAAGGAAATAAAAGTAC ]
[-] EMBL CNS09KXS [ CGAATCGGCCCTGCTCAAGCACGAGCTGGCCTACTGTCTGGGGCAGATGCAGGACGTCCGAGCCATTCCCGTGCTCACGAAAGTGCTTGCCGA TG TGCAGCA GGAAG CGATGGTGCGCCACGAGGCGGCCGAAGCACTGGGCGCGATCGGCGACAGT TCGGTCGAGGACACGCT GGTCAGC TAC AGCAA GGA CCCGG TCGTGGAGGTAGCGGAAACGTGCGAA ATTGC A CTGGAGCGTGTGCGATGGTTGAAGCAGAAGGATGCACTGAAGGACGACAACCCGTACGCCTCGGTCGACCCAACGCCGCCGGCCACTTCCAAG AGCGTCGAGGAGCTGCAGCG A ATTCTGATGGACGAGGCGGACACGCTGTTTAACCGGTA CCGGGCCATGTTTTGC CTGCGCAATCTGCGCACGGAGGAGGCAAACGCTCGCGCTGGCCAGCGGGCTAAAGGGCAAGAGTGCACTGTTCCGGCACGAGGTGGCGTTCGTCCTGGGGCAGCTGCAGGAGGAGTGCAGTGTGCCGTTTTTGGTGGAAAACTTGCGCGATCCGGCGGAAAACGAAATGGTACGGCATGAGTGCGCGG AAGCGCTTGGCGCGA TTGCGACGGACGAGTGTACGCGCGTGCTGAACGAGTATCTGAAGGACGAAAAGCGCGTGGTAAAGGAGAGCTGCGAGGTGGCGCTCGATATGTGCGAGTACGAGAACAGTCCCGAGTTTCAGTACGCCGACACGCTGGTTAAGGTAAACGATGGTCAATGAGCGAGATTCACGTGCAGTGTGTACATAAAGAC CAGGGGAAAACCAAAATCACAGGCAACACAGGTGAGGTTGAACACCGAAAGCTGTTAATCTGCGCTTTCCCTACAAATCTTACTGCTGTATTTTTTTTATGATAAGGTTTGGCAAAGGAAATAAA ]
[-] EMBL CNS09NYW [ ATGCAGGACGTCCGAGCCATTCCCGTGCTCACGAAAGTGCTTGCCGA TG TGCAGCA GGAAG CGATGGTGCGCCACGAGGCGGCCGAAGCACTGGGCGCGATCGGCGACAGT TCGGTCGAGGACACGCT GGTCAGC TAC AGCAA GGA CCCGG TCGTGGAGGTAGCGGAAACGTGCGAA ATTGA A CTGGAGCGTGTGCGATGGTTGAAGCAGAAGGATGCACTGAAGGACGACAACCCGTACGCCTCGGTCGACCCAACGCCGCCGGCCACTTCCAAG AGCGTCGAGGAGCTGCAGCG A ATTCTGATGGACGAGGCGGACACGCTGTTTAACCGGTA CCGGGCCATG TTTGC CTGCGCAATCTGCGCACGGAGGAGGCAAACGCTCGCGCTGGCCAGCGGGCTAAAGGGCAAGAGTGCACTGTTCCGGCACGAGGTGGCGTTCGTCCTGGGGCAGCTGCAGGAGGAGTGCAGTGTGCCGTTTTTGGTGGAAAACTTGCGCGATCCGGCGGAAAACGAAATGGTACGGCATGAGTGCGCGG AAGCGCTTGGCGCGA TTGCGACGGACGAGTGTACGCGCGTGCTGAACGAGTATCTGAAGGACGAAAAGCGCGTGGTAAAGGAGAGCTGCGAGGTGGCGCTCGATATGTGCGAGTACGAGAACAGTCCCGAGTTTCAGTACGCCGACACGCTGGTTAAGGTAAACGATGGTCAATGAGCGAGATTCACGTGCAGTGTGTACATAAAGAC CAGGGGAAAACCAAAATCACAGGCAACACAGGTGAGGTTGAACACCGAAAGCTGTTAATCTGCGCTTTCCCTACAAATCTTACTGCTGTATTTTTTTTATGATAAGGTTTGGCAAAGGAAATAAAAGTACGATGAA ]
[-] EMBL CNS08Z7Y [ GCAATCTGCGCACGGAGGAGGC AAACCTCGCGCTGGCCAGCGGGCTAAAGGGCAAGAGTGCACTGGGGCGGCACGAGGTGGCGTTCGTGCTGGGGCAGCTGCAGGAGGAGTGCAGTGTGCCGTTTTTGGTGGAAAACTTGCGCGATCCGGCGGAAAACGAAATGGTACGGCATGAGTGCGCGG AAGCGCTTGGCGCGA TTGCGACGGACGAGTGTACGCGCGTGCTGAACGAGTATCTGAAGGACGAAAAGCGCGTGGTAAAGGAGAGCTGCGAGGTGGCGCTCGATATGTGCGAATACGAGAACAGTCCCGAGTTTCAGTACGCCGACACGCTGGTTAAGGTAAACGATGGACAATGAGCGAGATTCACGTGCAGTGTGTACATAAAGACACAGGGGAAAAACAAAATCACAGGCAACACAGGTGAGGTTGAACACCGAAAGCTGTTAATCTGCGCTTTCCCTACAAATCTTACTGCTGTA TTTTTTTATGATAAGGTTTGGCAAAGGAAATAAAAGTACGATGAAAATT ]
[-] EMBL CNS08KW3 [ cgcCAATCTGCGCACGGAGGAGGCAAACGCTCGCGCTGGCCAGCGGGCTAAAGGGCAAGAGTGCACTGTTCCGGCACGAGGTGGCGTTCGTGCTGGGGCAGCTGCAGGAGGAGTGCAGTGTGCCGTTTTTGGTGGAAAACTTGCGCGATCCGGCGGAAAACGAAATGGTACGGCATGAGTGCGCGGAAAGC CTTGGCGCGA TTGCGACGGACGAGTGTACGCGCGTGCTGAACGAGTATCTGAAGGACGAAAAGCGCGTGGTAAAGGAGAGCTGCGAGGTGGCGCTCGATATGTGCGAATACGAGAACAGTCCCGAGTTTCAGTACGCCGACACGCTGGTTAAGGTAAACGATGGACAATGAGCGAGATTCACGT ]
[-] EMBL CNS09NXN [ AATCTGCGCACGGAGGAGGC AAACCTCGCGCTGGCCAGCGGGCTAAAGGGCAAGAGTGCACTGTTCCGGCACGAGGAAGCGTTCGTGCTGGGGCAGCTGCAGGAGGAGTGCAGTGTGCCGTTTTTGGTGGAAAACTTGCGCGATCCGGCGGAAAACGAAATGGTACGGCATGAGTGCGCGG AAGCGCTTGGCGCGA TTGCGACGGACGAGTGTACGCGCGTGCTGAACGAGTATCTGAAGGACGAAAAGCGCGTGGTAAAGGAGAGCTGCGAGGTGGCGCTCGATATGTGCGAATACGAGAACAGTCCCGAGTTTCAGTACGCCGACACGCTGGTTAAGGTAAACGATGGACAATGAGCGAGATTCACGTGCAGTGTGTACATAAAGACACAGGGGAAAAACAAAATCACAGGCAACACAGGTGAGGTTGAACACCGAAAGCTGTTAATCTGCGCTTTCCCTACAAATCTTACCGCTGTA TTTTTTTATGATAAGGTTTGGCAAAGGAAATAAAAGTACGATGAAAATTTATCA]
[-] EMBL CNS096K8 [ TGCTGGGGCAGCTGCAGGAGGAGTGCAGTGTGCCGTTTTTGGTGGAAAACTTGCGCGATCCGGCGGAAAACGAAATGGTACGGCATGAGTGCGCGG AAGCGCTTGGCGCGA TTGCGACGGACGAGTGTACGCGCGTGCTGAACGAGTATCTGAAGGACGAAAAGCGCGTGGTAAAGGAGAGCTGCGAGGTGGCGCTCGATATGTGCGAATACGAGAACAGTCCCGAGTTTCAGTACGCCGACACGCTGGTTAAGGTAAACGATGGACAATGAGCGAGATTCACGTGCAGTGTGTACATAAAGACACAGGGGAAAAACAAAATCACAGGCAACACAGGTGAGGTTGAACACCGAAAGCTGTTAATCTGCGCTTTCCCTACAAATCTTACTGCTGTA TTTTTTTATGATAAGGTTTGGCAAA GAAATAAAgagaggg ]
[-] EMBL CNS09FY8 [ CTTGCGCGATCC GCGGAAAACGAAAT GTAC GCATGAGTGCGCGG AAGCGCTTGGCGCGA TTGCGACGGACGAGTGTACGCGCGTGCTGAACGAGTATCTGAAGGACGAAAAGCGCGTGGTAAAGGAGAGCTGCGAGGTGGCGCTCGATATGTGCGAATACGAGAACAGTCCCGAGTTTCAGTACGCCGACACGCTGGTTAAGGTAAACGATGGACAATGAGCGAGATTCACGTGCAGTGTGTACATAAAGACACA GGGAAAAACAAAATCACAGGCAACACAGGTGAGGTTGAACACCGAAAGCTGTTAATCTGCGCTTTCCCTACAAATCTTACTGCTGTA TTTTTTTATGATAAGGTTTGGCAAA GAAATAAAAGTA ]
consensusID : consensus_9973#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 767 fasta sequence
[CCCCGAGGTTTNCACTGCCGCAGCACCGAGAGCACGGAATCACCACAAGAAATCCAGCTCTAAAATGGTCCAAATAGATGAAAGCAAAGTGGCTGCCATCGGCGACGTGTTAAACAACCGTGACCTGACCACTGAAGTGAACGATTCCGCGCGCTGTTCACTTTGCGCAACATCGGTGTGCTGAGCGTGCTGCTCGAGTCCATACTGGCCGGTGTTTCGATGACGAATCTGGCCCTGCTCAAGCACGAGCTGGCCTACTGTCTGGGGCAGATGCAGGACGTCCGAGCCATTCCCGTGCTCACGAAAGTGCTTGCCGATGTGCAGCAGGAAGCGATGGTGCGCCACGAGGCGGCGAAGCACTGGGCGCGATCGGGACAGTATCGGTCGAGGACACGCTGGTCAGCTACAGCAAGGACCCGGTCGTGGAGGTAGCGGAAACGTGCGAAATTGCACTGGAGCGTGTGCGATGGTTGAAGCAGAAGGAAGCACTGAAGGACGACAACCGGTACGCCTCGGATCGACCCAAAGCCGCGGCCACTTCAAGAGCGTCGAGGAGCTGCAGNGAATTCTGATGGACGAGGACGGACACNCTGGTTTAAACCAGGTAACCCGGGACCATTGTATTGNAGCTGCGCAATCTTGCGTACGGAGGAGGGCAAGNCTCCGCGCTTGGGCCAGACGGGCTAAAGGGCAAGAGTTGCACTGTTCCGGGCACGAGGTGGGTCGTCACTGAGGGCAGATTAGAGGAAGGATAGNCAGATGTGCCG]
[+] EMBL AL694552 [CCCCGAGGTTTNCACTGCCGCAGCACCGAGAGCACGGAATCACCACAAGAAATCCAGCTCTAAAATGGTCCAAATAGATGAAAGCAAAGTGGCTGCCATCGGCGACGTGTTAAACAACCGTGACCTGACCACTGAAGTGAACGATTCCGCGCGCTGTTCACTTTGCGCAACATCGGTGTGCTGAGCGTGCTGCTCGAGTCCATACTGGCCGGTGTTTCGATGACGAATCTGGCCCTGCTCAAGCACGAGCTGGCCTACTGTCTGGGGCAGATGCAGGACGTCCGAGCCATTCCCGTGCTCACGAAAGTGCTTGCCGATGTGCAGCAGGAAGCGATGGTGCGCCACGAGGCGGCGAAGCACTGGGCGCGATCGGGACAGTATCGGTCGAGGACACGCTGGTCAGCTACAGCAAGGACCCGGTCGTGGAGGTAGCGGAAACGTGCGAAATTGCACTGGAGCGTGTGCGATGGTTGAAGCAGAAGGAAGCACTGAAGGACGACAACCGGTACGCCTCGGATCGACCCAAAGCCGCGGCCACTTCAAGAGCGTCGAGGAGCTGCAGNGAATTCTGATGGACGAGGACGGACACNCTGGTTTAAACCAGGTAACCCGGGACCATTGTATTGNAGCTGCGCAATCTTGCGTACGGAGGAGGGCAAGNCTCCGCGCTTGGGCCAGACGGGCTAAAGGGCAAGAGTTGCACTGTTCCGGGCACGAGGTGGGTCGTCACTGAGGGCAGATTAGAGGAAGGATAGNCAGATGTGCCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9973#0 AGATTCGGCAGNGGCTCGTTCCACGCCGCCAGCACCCGAGAGCACCGGAATCCACCACAA 60
consensus_9973#1 ------CCCCGAGGT---TTNCACTGCCGCAGCACC-GAGAGCAC-GGAATC-ACCACAA 48
* * ** ** *** * ******* ******** ****** *******
consensus_9973#0 GAAATCCAGCTCTAAAATGGTCCAAATAGATGAAAGCAAAGTGGCCGCCATCGGCGACGT 120
consensus_9973#1 GAAATCCAGCTCTAAAATGGTCCAAATAGATGAAAGCAAAGTGGCTGCCATCGGCGACGT 108
********************************************* **************
consensus_9973#0 GTTAAACAACCGTGACC-GACCACTGAAG-GAACGATTCCGCGCGCTGTTCACTTTGCGC 178
consensus_9973#1 GTTAAACAACCGTGACCTGACCACTGAAGTGAACGATTCCGCGCGCTGTTCACTTTGCGC 168
***************** *********** ******************************
consensus_9973#0 AACATCGGTGG--CGAGCGTGC-GCTCGAGTCCAT--CGGCCGGTGTTTCGATGACGAAT 233
consensus_9973#1 AACATCGGTGTGCTGAGCGTGCTGCTCGAGTCCATACTGGCCGGTGTTTCGATGACGAAT 228
********** ******** ************ **********************
consensus_9973#0 C-GGCCCTGCTCAAGCACGAGCTGGCCTACTGTCTGGGGCAGATGCAGGACGTCCGAGCC 292
consensus_9973#1 CTGGCCCTGCTCAAGCACGAGCTGGCCTACTGTCTGGGGCAGATGCAGGACGTCCGAGCC 288
* **********************************************************
consensus_9973#0 ATTCCCGTGCTCACGAAAGTGCTTGCCGATGTGCAGCAGGAAGCGATGGTGCGCCACGAG 352
consensus_9973#1 ATTCCCGTGCTCACGAAAGTGCTTGCCGATGTGCAGCAGGAAGCGATGGTGCGCCACGAG 348
************************************************************
consensus_9973#0 GCGGCCGAAGCACTGGGCGCGATCGGCGACAGT-TCGGTCGAGGACACGCTGGTCAGCTA 411
consensus_9973#1 GCGGC-GAAGCACTGGGCGCGATCGG-GACAGTATCGGTCGAGGACACGCTGGTCAGCTA 406
***** ******************** ****** **************************
consensus_9973#0 CAGCAAGGACCCGGTCGTGGAGGTAGCGGAAACGTGCGAAATTGCACTGGAGCGTGTGCG 471
consensus_9973#1 CAGCAAGGACCCGGTCGTGGAGGTAGCGGAAACGTGCGAAATTGCACTGGAGCGTGTGCG 466
************************************************************
consensus_9973#0 ATGGTTGAAGCAGAAGGAAGCACTGAAGGACGACAACCCGTACGCCTCGG-TCGACCCAA 530
consensus_9973#1 ATGGTTGAAGCAGAAGGAAGCACTGAAGGACGACAACCGGTACGCCTCGGATCGACCCAA 526
************************************** *********** *********
consensus_9973#0 CGCCGCCGGCCACTTCCAAGAGCGTCGAGGAGCTGCAGCGAATTCTGATGGACGAGG-CG 589
consensus_9973#1 AGCCGC-GGCCACTTC-AAGAGCGTCGAGGAGCTGCAGNGAATTCTGATGGACGAGGACG 584
***** ********* ********************* ****************** **
consensus_9973#0 GACACGCTGTTT--AACC-GGTACC---GGGCCAT---GTTTGCGCTGCGCAATCT-GCG 639
consensus_9973#1 GACACNCTGGTTTAAACCAGGTAACCCGGGACCATTGTATTGNAGCTGCGCAATCTTGCG 644
***** *** ** **** **** * ** **** ** ************ ***
consensus_9973#0 CACGGAGGAGG-CAACGCTC-GCGCT--GGCCAG-CGGGCTAAAGGGCAAGAGT-GCACT 693
consensus_9973#1 TACGGAGGAGGGCAAGNCTCCGCGCTTGGGCCAGACGGGCTAAAGGGCAAGAGTTGCACT 704
********** *** *** ***** ****** ******************* *****
consensus_9973#0 GTTCCGG-CACGAGGTGGCGTTCGTGCTG-GGGCAGCTGCAGGAGGAGTGCAGTGTGCCG 751
consensus_9973#1 GTTCCGGGCACGAGGTGG-GTCGTCACTGAGGGCAGAT-TAGAGGAAGGATAGNCAGATG 762
******* ********** ** *** ****** * ** * ** ** * *
consensus_9973#0 TTTTTGGTGGAAAACTTGCGCGATCCGGCGGAAAACGAAATGGTACGGCATGAGTGCGCG 811
consensus_9973#1 TGCCG------------------------------------------------------- 767
*
consensus_9973#0 GAAGCGCTTGGCGCGATTGCGACGGACGAGTGTACGCGCGTGCTGAACGAGTATCTGAAG 871
consensus_9973#1 ------------------------------------------------------------
consensus_9973#0 GACGAAAAGCGCGTGGTAAAGGAGAGCTGCGAGGTGGCGCTCGATATGTGCGAATACGAG 931
consensus_9973#1 ------------------------------------------------------------
consensus_9973#0 AACAGTCCCGAGTTTCAGTACGCCGACACGCTGGTTAAGGTAAACGATGGACAATGAGCG 991
consensus_9973#1 ------------------------------------------------------------
consensus_9973#0 AGATTCACGTGCAGTGTGTACATAAAGACACAGGGGAAAAACAAAATCACAGGCAACACA 1051
consensus_9973#1 ------------------------------------------------------------
consensus_9973#0 GGTGAGGTTGAACACCGAAAGCTGTTAATCTGCGCTTTCCCTACAAATCTTACTGCTGTA 1111
consensus_9973#1 ------------------------------------------------------------
consensus_9973#0 TTTTTTTATGATAAGGTTTGGCAAAGGAAATAAAAGTACGATGAAAATTTATCA 1165
consensus_9973#1 ------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||