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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1017#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 663 fasta sequence
[GTGACAGTTGTGTTACATGGAGTATTGAACGAGGGAGAAAACGCATCATGAACATGGACAACGTGGACCAGCATTTGATTCACCAGTTTAGTTGTCTAGGCACCACCGACAAGGACGATCTGGTGAAACAGCTGCAGAAGTTGCTGGCTGGTAGCCAGCTAAATGAAACTACTGCTGCATTCTTTCTGGATATGAATAATTGGAATCTCCAAGCAGCTATATGTAGTTATTTTGACTTTGAATCTCCAGTTCAAAATAAATTTCCTTGTATGACACTGATATGTGATAGCACTATTGGTGAAGGAGAATCAATACCACCACTCACTAATTTTCAAAAATCTTGGCATATACAAAATAGTGGTACAGAAACATGGCCTGAAGGAGTTTGCTTACAATATATTGGAGGAGTACAAATGGGTGCATGTACAAGGGTACCAGTTTCATCTTTAGGTCCTGCAGAAATAACAGTAATAAGTGTGGATCTTCAAAGTCCTCCATATTGTGGTACATTTAAAAGTAAATGGAGGATGATGGTAAAATCTACAGAAACCTTTTTTGGAGATGTTATTTGGGTAACTATTACAGTAAGTGAAAGTGGTACTCTGGCCATTACTCAGCAATTACATCAATTAAGTACTTCATCATCTAATGATACAAAGATGT]
[+] EMBL BI504655 [GTGACAGTTGTGTTACATGGAGTATTGAACGAGGGAGAAAACGCATCATGAACATGGACAACGTGGACCAGCATTTGATTCACCAGTTTAGTTGTCTAGGCACCACCGACAAGGACGATCTGGTGAAACAGCTGCAGAAGTTGCTGGCTGGTAGCCAGCTAAATGAAACTACTGCTGCATTCTTTCTGGATATGAATAATTGGAATCTCCAAGCAGCTATATGTAGTTATTTTGACTTTGAATCTCCAGTTCAAAATAAATTTCCTTGTATGACACTGATATGTGATAGCACTATTGGTGAAGGAGAATCAATACCACCACTCACTAATTTTCAAAAATCTTGGCATATACAAAATAGTGGTACAGAAACATGGCCTGAAGGAGTTTGCTTACAATATATTGGAGGAGTACAAATGGGTGCATGTACAAGGGTACCAGTTTCATCTTTAGGTCCTGCAGAAATAACAGTAATAAGTGTGGATCTTCAAAGTCCTCCATATTGTGGTACATTTAAAAGTAAATGGAGGATGATGGTAAAATCTACAGAAACCTTTTTTGGAGATGTTATTTGGGTAACTATTACAGTAAGTGAAAGTGGTACTCTGGCCATTACTCAGCAATTACATCAATT ]
[+] EMBL BI507775 [ CCAGCATTTGATTCACCAGTTTAGTTGTCTAGGCACCACCGACAAGGACGATCTGGTGAAACAGCTGCAGAAGTTGCTGGCTGGTAGCCAGCTAAATGAAACTACTGCTGCATTCTTTCTGGATATGAATAATTGGAATCTCCAAGCAGCTATATGTAGTTATTTTGACTTTGAATCTCCAGTTCAAAATAAATTTCCTTGTATGACACTGATATGTGATAGCACTATTGGTGAAGGAGAATCAATACCACCACTCACTAATTTTCAAAAATCTTGGCATATACAAAATAGTGGTACAGAAACATGGCCTGAAGGAGTTTGCTTACAATATATTGGAGGAGTACAAATGGGTGCATGTACAAGGGTACCAGTTTCATCTTTAGGTCCTGCAGAAATAACAGTAATAAGTGTGGATCTTCAAAGTCCTCCATATTGTGGTACATTTAAAAGTAAATGGAGGATGATGGTAAAATCTACAGAAACCTTTTTTGGAGATGTTATTTGGGTAACTATTACAGTAAGTGAAAGTGGTACTCTGGCCATTACTCAGCAATTACATCAATTAAGTACTTCATCATCTAATGATACAAAGATGT]
consensusID : consensus_1017#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 274 fasta sequence
[GCTGCAGAAGTTGCTGGCTGGTAGCCAGCTAAATGAAACTACTGCTGCATTCTTTCTGGATATGAATAATTGGTGAGATACTCTACCGCGTACTCGTTTTGTGTTAATCAAATTTAATTTTGCAACCTAACCCTACCATCGCCATATTTATAATCTAGGTAGTACTATCTTGTCGAAAGTTACTTATTTATCTTATTGATGTCTCATAATTACAGATATAATATTTTGTTTGATTTTTTAAAATTATTGTATATGTATTATTAATGTAGAAAAA]
[+] EMBL BI509447 [GCTGCAGAAGTTGCTGGCTGGTAGCCAGCTAAATGAAACTACTGCTGCATTCTTTCTGGATATGAATAATTGGTGAGATACTCTACCGCGTACTCGTTTTGTGTTAATCAAATTTAATTTTGCAACCTAACCCTACCATCGCCATATTTATAATCTAGGTAGTACTATCTTGTCGAAAGTTACTTATTTATCTTATTGATGTCTCATAATTACAGATATAATATTTTGTTTGATTTTTTAAAATTATTGTATATGTATTATTAATGTAGAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1017#0 GTGACAGTTGTGTTACATGGAGTATTGAACGAGGGAGAAAACGCATCATGAACATGGACA 60
consensus_1017#1 ------------------------------------------------------------
consensus_1017#0 ACGTGGACCAGCATTTGATTCACCAGTTTAGTTGTCTAGGCACCACCGACAAGGACGATC 120
consensus_1017#1 ------------------------------------------------------------
consensus_1017#0 TGGTGAAACAGCTGCAGAAGTTGCTGGCTGGTAGCCAGCTAAATGAAACTACTGCTGCAT 180
consensus_1017#1 ----------GCTGCAGAAGTTGCTGGCTGGTAGCCAGCTAAATGAAACTACTGCTGCAT 50
**************************************************
consensus_1017#0 TCTTTCTGGATATGAATAATTGGAATCTCCAAGCAGCTATATGTAGTTATTTTGACTTTG 240
consensus_1017#1 TCTTTCTGGATATGAATAATTGGTGAG---ATACTCTACCGCGTACTCGTTTTGTGTT-- 105
*********************** * * *** * ***** **
consensus_1017#0 AATCTCCAGTTCAAAATAAATTTCCTTGTATGACACTGATATGTGATAGCACTATTGGTG 300
consensus_1017#1 --------AATCAAATTTAATTTTGCAACCTAACCCTACCATC--GCCATATTTATAATC 155
***** * ***** * ** ** ** * * * *
consensus_1017#0 AAGGAGAATCAATACCACCACTCACTAATTTTCAAAAATCTTGGCATATACAAAATAGTG 360
consensus_1017#1 TAGGTAGTACTATCTTGTCGAAAGTTACTTATTTATCTTATTGATGTCTCATAATTACAG 215
*** * ** * ** ** * * * *** * * ** ** *
consensus_1017#0 GTACAGAAACATGGCCTGAAGGAGTTTGCTTACAATATATTGGAGGAGTACAAATGGGTG 420
consensus_1017#1 ATATA-ATATTTTGTTTGA------TTTTTTAAAAT-TATTGTATATGTATTATTA---- 263
** * * * * * *** ** *** *** ***** * *** * *
consensus_1017#0 CATGTACAAGGGTACCAGTTTCATCTTTAGGTCCTGCAGAAATAACAGTAATAAGTGTGG 480
consensus_1017#1 -ATGTAGAAAAA------------------------------------------------ 274
***** **
consensus_1017#0 ATCTTCAAAGTCCTCCATATTGTGGTACATTTAAAAGTAAATGGAGGATGATGGTAAAAT 540
consensus_1017#1 ------------------------------------------------------------
consensus_1017#0 CTACAGAAACCTTTTTTGGAGATGTTATTTGGGTAACTATTACAGTAAGTGAAAGTGGTA 600
consensus_1017#1 ------------------------------------------------------------
consensus_1017#0 CTCTGGCCATTACTCAGCAATTACATCAATTAAGTACTTCATCATCTAATGATACAAAGA 660
consensus_1017#1 ------------------------------------------------------------
consensus_1017#0 TGT 663
consensus_1017#1 ---
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |