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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1129#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 541 fasta sequence
[GTCCGAAGTCGTCGGGAAATCACGAAGTCACGAAGAGATGCGATTGAAAAATATAGTTCGGTGTTGCAGTTTCTTTCAGAATTTGGATCTTTTCTTTTCATGATTAATCAGGAGAGTAGTCATTAAGAGTAATTCGTTCTGTCTTCAGAAAAGTCTATCCATCTTTTTAATTAGACTTCTTATTTTTATTCTTCTATTTCTTCTTTCCTCCCTCGAATATTGTAATACAATTTATGCTAAAAACAAGAAATTAAGTTAGTAAAGAAATATAATATATTAGAAAGATCGATTACAAGTAACCGGAAGTATAGATCTTGCTCTTTGGATCTAAAGGATATTGGTACCGAGTATTAACATTTCCTTGTTAATTTCGTCGAGGTTAAAAGGAAACAATTAATACTTAGAAGTATCCTTAGCTAATTCTATTAATTAATTATCTAAATTATCTTATTACCTTCTTCAGCGCTTTTCATTGCCAATAAAATCTCCTACTCTGCCGTATCTAAAGAACAAATCTTTTAAATCCATTTTAACAATAAAC]
[+] EMBL BI516950 [GTCCGAAGTCGTCGGGAAATCACGAAGTCACGAAGAGATGCGATTGAAAAATATAGTTCGGTGTTGCAGTTTCTTTCAGAATTTGGATCTTTTCTTTTCATGATTAATCAGGAGAGTAGTCATTAAGAGTAATTCGTTCTGTCTTCAGAAAAGTCTATCCATCTTTTTAATTAGACTTCTTATTTTTATTCTTCTATTTCTTCTTTCCTCCCTCGAATATTGTAATACAATTTATGCTAAAAACAAGAAATTAAGTTAGTAAAGAAATATAATATATTAGAAAGATCGATTACAAGTAACCGGAAGTATAGATCTTGCTCTTTGGATCTAAAGGATATTGGTACCGAGTATTAACATTTCCTTGTTAATTTCGTCGAGGTTAAAAGGAAACAATTAATACTTAGAAGTATCCTTAGCTAATTCTATTAATTAATTATCTAAATTATCTTATTACCTTCTTCAGCGCTTTTCATTGCCAATAAAATCTCCTACTCTGCCGTATCTAAAGAACAAATCTTTTAAATCCATTTTAACAATAAAC]
[+] EMBL BI517202 [ TCGTCGGGAAATCACGAAGTCACGAAGAGATGCGATTGAAAAATATAGTTCGGTGTTGCAGTTTCTTTCAGAATTTGGATCTTTTCTTTTCATGATTAATCAGGAGAGTAGTCATTAAGAGTAATTCGTTCTGTCTTCAGAAAAGTCTATCCATCTTTTTAATTAGACTTCTTATTTTTATTCTTCTATTTCTTCTTTCCTCCCTCGAATATTGTAATACAATTTATGCTAAAAACAAGAAATTAAGTTAGTAAAGAAATATAATATATTAGAAAGATCGATTACAAGTAACCGGAAGTATAGATCTTGCTCTTTGGATCTAAAGGATATTGGTACCGAGTATTAACATTTCCTTGTTAATTTCGTCGAGGTTAAAAGGAAACAATTAATACTTAGAAGTATCCTTAGCTAATTCTATTAATTAATTATCTAAATTATCTTATTACCTTCTTCAGCGCTTTTCATTGCCAATAAAATCTCCTACTCTGCCGTATCTAAAGAA ]
consensusID : consensus_1129#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 186 fasta sequence
[AATCGACATCGGTATCCGTATCTAAAGAACAAATCTTTTAAATCCATTTTAACAATAAACAAATATAATCAATTTAACAAACTTAACCCAACGAAATTACATATTTGATAATTTTCCCGAGCTATATTTACATAATCGTCAATCTCCTGGTGCAAATTTTTCACGTAAAAAAAAAATAAAAAAAAA]
[+] EMBL BI510112 [AATCGACATCGGTATCCGTATCTAAAGAACAAATCTTTTAAATCCATTTTAACAATAAACAAATATAATCAATTTAACAAACTTAACCCAACGAAATTACATATTTGATAATTTTCCCGAGCTATATTTACATAATCGTCAATCTCCTGGTGCAAATTTTTCACGTAAAAAAAAAATAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1129#0 GTCCGAAGTCGTCGGGAAATCACGAAGTCACGAAGAGATGCGATTGAAAAATATAGTTCG 60
consensus_1129#1 ------------------------------------------------------------
consensus_1129#0 GTGTTGCAGTTTCTTTCAGAATTTGGATCTTTTCTTTTCATGATTAATCAGGAGAGTAGT 120
consensus_1129#1 ------------------------------------------------------------
consensus_1129#0 CATTAAGAGTAATTCGTTCTGTCTTCAGAAAAGTCTATCCATCTTTTTAATTAGACTTCT 180
consensus_1129#1 ------------------------------------------------------------
consensus_1129#0 TATTTTTATTCTTCTATTTCTTCTTTCCTCCCTCGAATATTGTAATACAATTTATGCTAA 240
consensus_1129#1 ----------------AATCGACATCGGTATC-CGTAT-CTAAAGAACAAATC-TTTTAA 41
** * * * * ** ** * * **** * * ***
consensus_1129#0 AAACAAGAAATTAAGTTAGTAAAGAAATATAATATATTAGAAAGATCGATTACAAGTAAC 300
consensus_1129#1 ATCCA-----TTTTAACAATAAACAAATATAATCAATTTAACAAACTTAACCCAA----- 91
* ** ** * **** ********* *** * * * * ***
consensus_1129#0 CGGAAGTATAGATCTTGCTCTTTGGATCTAAAGGATATTGGTACCGAGTATTAACATTTC 360
consensus_1129#1 CGAAATTACATATTTGATAATTTT--CCCGAGCTATATTTACAT-AATCGTCAATCTCCT 148
** ** ** * ** * *** * * ***** * * * ** *
consensus_1129#0 CTTGTTAATTTCGTCGAGGTTAAAAGGAAACAATTAATACTTAGAAGTATCCTTAGCTAA 420
consensus_1129#1 GGTGCAAATTT--TTCACGTAAAAAAAAAATAAAAAAAAA-------------------- 186
** ***** * * ** **** *** ** ** *
consensus_1129#0 TTCTATTAATTAATTATCTAAATTATCTTATTACCTTCTTCAGCGCTTTTCATTGCCAAT 480
consensus_1129#1 ------------------------------------------------------------
consensus_1129#0 AAAATCTCCTACTCTGCCGTATCTAAAGAACAAATCTTTTAAATCCATTTTAACAATAAA 540
consensus_1129#1 ------------------------------------------------------------
consensus_1129#0 C 541
consensus_1129#1 -
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |