These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1173#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 557 fasta sequence [CCTGTTCTACGTGTACACGATCAAGATACCTCAACACAGCAACGGGCGACGAAAAGCGACTCGTATGCACCTGGGACCGCGGTTCGAGGCGCACTTCAAGATGCGGTAGAGGAAGTCCCTCGACCCGAGCTCACCCGAATCCAGACCGGTGCAACAACCGACAGTTATCCCGCGATATTCCCGGTGACACGTACGAAGCATAATAATCGCATGCATAATAACAACAATCAACGGAGCGAGACTCCTGGAACGTAGAAAAGAAGGAAGAGAATCCGGCAAAGGATTCCTGAAATACCCATCCATCCACTCAGTGCGGCCAACCCAAGGCTCTCTCCCAAGTTTCTCAGGCCGAACGAGCCCGGGAGCCTCGGATCGATCGATCGATGAGAACCACTGCCCTCTGAAAGGATCCCTTTAGAGGAGCGCGCCTAGGCGCGCGCGATCGTCCTCCCCTTCGAGAAAAAAACGTCATCGTCGACCTTTCCCCCTGCCCCTCCCCGCCGTTAAACCGTTTCCCTCCCCCGTCGAGGGGCACCTTTTCGAGAGAAGAGAAGTGA] [+] EMBL BI510121 [CCTGTTCTACGTGTACACGATCAAGATACCTCAACACAGCAACGGGCGACGAAAAGCGACTCGTATGCACCTGGGACCGCGGTTCGAGGCGCACTTCAAGATGCGGTAGAGGAAGTCCCTCGACCCGAGCTCACCCGAATCCAGACCGGTGCAACAACCGACAGTTATCCCGCGATATTCCCGGTGACACGTACGAAGCATAATAATCGCATGCATAATAACAACAATCAACGGAGCGAGACTCCTGGAACGTAGAAAAGAAGGAAGAGAATCCGGCAAAGGATTCCTGAAATACCCATCCATCCACTCAGTGCGGCCAACCCAAGGCTCTCTCCCAAGTTTCTCAGGCCGAACGAGCCCGGGAGCCTCGGATCGATCGATCGATGAGAACCACTGCCCTCTGAAAGGATCCCTTTAGAGGAGCGCGCCTAGGCGCGCGCGATCGTCCTCCCCTTCGAGAAAAAAACGTCATCGTCGACCTTTCCCCCTGCCCCTCCCCGCCGTTAAACCGTTTCCCTCCCCCGTCGAGGGGCACCTTTTCGAGAGAAGAGAAGTGA] [+] EMBL BI505999 [ GCAACGGGCGACGAAAAGCGACTCGTATGCACCTGGGACCGCGGTTCGAGGCGCACTTCAAGATGCGGTAGAGGAAGTCCCTCGACCCGAGCTCACCCGAATCCAGACCGGTGCAACAACCGACAGTTATCCCGCGATATTCCCGGTGACACGTACGAAGCATAATAATCGCATGCATAATAACAACAATCAACGGAGCGAGACTCCTGGAACGTAGAAAAGAAGGAAGAGAATCCGGCAAAGGATTCCTGAAATACCCATCCATCCACTCAGTGCGGCCAACCCAAGGCTCTCTCCCAAGTTTCTCAGGCCGAACGAGCCCGGGAGCCTCGGATCGATCGATCGATGAGAACCACTGCCCTCTGAAAGGATCCCTTTAGAGGAGCGCGCCTAGGCGCGCGCGATCGTCCTCCCCTTCGAGAAAAAAACGTCATCGTCGACCTTTCCCCCTGCCCCTCCCCGCCGTTAAACCGTTTCCCTCCCCCGTCGAGGGGCACCTTTTCGAGAGAAGAGAAGTGA] consensusID : consensus_1173#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 473 fasta sequence [GCATGCATAATAACAACAATCAACGGAGCGAGACTCCTGGAACGTAGAAAAGAAGGAAAAGAATCCGGCAAAGGATTCCTGAAATACCCATCCATCCACTCAGTGCGGCCAACCCAAGGCTCTCTCTCAGTTTCTCAGGCCGAACGAGCCCGGGAGCCTCGGATCGATCGATCGATGAGAACCACTGCCCTCTGAAAGGATCCCTTTAGAGGAGCGCGCGCGATCGTCCTCCCCTTCGAGAAAAAACGTCATCGTCGACCTTTCCCCCTGCCCCTCCCCGCCGTTAAACCGTTTCCCTCCCCCGTCGAGGGGCACCTTTTCGAGAGAAGAGAAGTGAAGAAGAAGAAGAAACAGAAGAAACAGAAGAGGAGGAGGAAGAAGGAGAGACCCGGTCGTCGTCACGGTGGCAAGCTTAGTGAGCGGGAACGTAGCGGTGCGTTACGATGAGGCGTCAGGAGTGGTTGGCACGGGGG] [+] EMBL BI504538 [GCATGCATAATAACAACAATCAACGGAGCGAGACTCCTGGAACGTAGAAAAGAAGGAAAAGAATCCGGCAAAGGATTCCTGAAATACCCATCCATCCACTCAGTGCGGCCAACCCAAGGCTCTCTCTCAGTTTCTCAGGCCGAACGAGCCCGGGAGCCTCGGATCGATCGATCGATGAGAACCACTGCCCTCTGAAAGGATCCCTTTAGAGGAGCGCGCGCGATCGTCCTCCCCTTCGAGAAAAAACGTCATCGTCGACCTTTCCCCCTGCCCCTCCCCGCCGTTAAACCGTTTCCCTCCCCCGTCGAGGGGCACCTTTTCGAGAGAAGAGAAGTGAAGAAGAAGAAGAAACAGAAGAAACAGAAGAGGAGGAGGAAGAAGGAGAGACCCGGTCGTCGTCACGGTGGCAAGCTTAGTGAGCGGGAACGTAGCGGTGCGTTACGATGAGGCGTCAGGAGTGGTTGGCACGGGGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1173#0 CCTGTTCTACGTGTACACGATCAAGATACCTCAACACAGCAACGGGCGACGAAAAGCGAC 60 consensus_1173#1 ------------------------------------------------------------ consensus_1173#0 TCGTATGCACCTGGGACCGCGGTTCGAGGCGCACTTCAAGATGCGGTAGAGGAAGTCCCT 120 consensus_1173#1 ------------------------------------------------------------ consensus_1173#0 CGACCCGAGCTCACCCGAATCCAGACCGGTGCAACAACCGACAGTTATCCCGCGATATTC 180 consensus_1173#1 ------------------------------------------------------------ consensus_1173#0 CCGGTGACACGTACGAAGCATAATAATCGCATGCATAATAACAACAATCAACGGAGCGAG 240 consensus_1173#1 ----------------------------GCATGCATAATAACAACAATCAACGGAGCGAG 32 ******************************** consensus_1173#0 ACTCCTGGAACGTAGAAAAGAAGGAAGAGAATCCGGCAAAGGATTCCTGAAATACCCATC 300 consensus_1173#1 ACTCCTGGAACGTAGAAAAGAAGGAAAAGAATCCGGCAAAGGATTCCTGAAATACCCATC 92 ************************** ********************************* consensus_1173#0 CATCCACTCAGTGCGGCCAACCCAAGGCTCTCTCCCAAGTTTCTCAGGCCGAACGAGCCC 360 consensus_1173#1 CATCCACTCAGTGCGGCCAACCCAAGGCTCTCTCTCA-GTTTCTCAGGCCGAACGAGCCC 151 ********************************** ** ********************** consensus_1173#0 GGGAGCCTCGGATCGATCGATCGATGAGAACCACTGCCCTCTGAAAGGATCCCTTTAGAG 420 consensus_1173#1 GGGAGCCTCGGATCGATCGATCGATGAGAACCACTGCCCTCTGAAAGGATCCCTTTAGAG 211 ************************************************************ consensus_1173#0 GAGCGCGCCTAGGCGCGCGCGATCGTCCTCCCCTTCGAGAAAAAAACGTCATCGTCGACC 480 consensus_1173#1 GAGC----------GCGCGCGATCGTCCTCCCCTTCGAGAAAAAA-CGTCATCGTCGACC 260 **** ******************************* ************** consensus_1173#0 TTTCCCCCTGCCCCTCCCCGCCGTTAAACCGTTTCCCTCCCCCGTCGAGGGGCACCTTTT 540 consensus_1173#1 TTTCCCCCTGCCCCTCCCCGCCGTTAAACCGTTTCCCTCCCCCGTCGAGGGGCACCTTTT 320 ************************************************************ consensus_1173#0 CGAGAGAAGAGAAGTGA------------------------------------------- 557 consensus_1173#1 CGAGAGAAGAGAAGTGAAGAAGAAGAAGAAACAGAAGAAACAGAAGAGGAGGAGGAAGAA 380 ***************** consensus_1173#0 ------------------------------------------------------------ consensus_1173#1 GGAGAGACCCGGTCGTCGTCACGGTGGCAAGCTTAGTGAGCGGGAACGTAGCGGTGCGTT 440 consensus_1173#0 --------------------------------- consensus_1173#1 ACGATGAGGCGTCAGGAGTGGTTGGCACGGGGG 473 |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |