These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1274#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 477 fasta sequence [ACCGTCGGGGTCGACGAAGAAACAAAGAACACCCTCGCTTCCTGTTTCGCGCGAGTTCGATGTTCTTCCGGTTCAACGATTCCTCGGTGGTGCAGCTTCCTCGACACGTTGGCGATTCGCCATACGATTCGCGAAGGTGATCCATCTTCGAGACCGGATTCCCCTTCGAGACTCAATTCGTCTTGCGGTAATGCTGGAACCCGTAAAAATGTCCGGGCGCCGATTGAAAATCTCGTCACGTTATTGGCCGGTGATTCGTATATTTTTTGGAACGGAATGCACGGCATGATACGAAACCGATGGCCGATTGGTAGAGGGAGATCAGATATTGGCGATAGATGGACAACCACTAGATTCGAATATCTCTCATGAGCAGGCAATCTCGATCCTCCAGAAGGCACGTGGTCTGGTCGAGTTGGTCGTAGCAAGAAGCACTCAAGACGTTGGGAGCTCTTTGCCGACGGATGAGTTGTCCGG] [+] EMBL BI507639 [ACCGTCGGGGTCGACGAAGAAACAAAGAACACCCTCGCTTCCTGTTTCGCGCGAGTTCGATGTTCTTCCGGTTCAACGATTCCTCGGTGGTGCAGCTTCCTCGACACGTTGGCGATTCGCCATACGATTCGCGAAGGTGATCCATCTTCGAGACCGGATTCCCCTTCGAGACTCAATTCGTCTTGCGGTAATGCTGGAACCCGTAAAAATGTCCGGGCGCCGATTGAAAATCTCGTCACGTTATTGGCCGGTGATTCGTATATTTTTTGGAACGGAATGCACGGCATGATACGAAACCGATGGCCGATTGGTAGAGGGAGATCAGATATTGGCGATAGATGGACAACCACTAGATTCGAATATCTCTCATGAGCAGGCAATCTCGATCCTCCAGAAGGCACGTGGTCTGGTCGAGTTGGTCGTAGCAAGAAGCACTCAAGACGTTGGGAGCTCTTTGCCGACGGATGAGTTGTCCGG] consensusID : consensus_1274#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 464 fasta sequence [CTTCCCCTTCAACGGGTATCCATCATCATCATTTGCCACCCTCTTCGTCCCTCCCGCTCGTTTGATCCAGCACCAAGCACCAGCTCGCCAAATTTCATCCCGCGTTTCCTGTTCTTTTCCTTTCCTTTCCTTTCCCTCTTCCTCCTCCACCTCTCTTCTTTCATCCTCCCCCTCTAACCGTCGGGGTCGACGAAGAAACAAAGAACACCCTCGCTNCCTGTTTCGCGCGAGTTCGATGTTCTTCCGGTTCAACGATTCCTCGGTGGTGCAGCTNNNTCGACACGCGATGGCCGATTGGTAGAGGGAGATCAGATATTGGCGATAGATGGACAACCACTAGATTCGAATATCTCTCATGAGCAGGCAATCTCGATCCTCCAGAAGGCACGTGGTCTGGTCGAGTTGGTCGTAGCAAGAAGCACTCAAGACGTTGGGAGCTCTTTGCCGACGGATGAGTTGTCCGG] [+] EMBL BI509112 [CTTCCCCTTCAACGGGTATCCATCATCATCATTTGCCACCCTCTTCGTCCCTCCCGCTCGTTTGATCCAGCACCAAGCACCAGCTCGCCAAATTTCATCCCGCGTTTCCTGTTCTTTTCCTTTCCTTTCCTTTCCCTCTTCCTCCTCCACCTCTCTTCTTTCATCCTCCCCCTCTAACCGTCGGGGTCGACGAAGAAACAAAGAACACCCTCGCTNCCTGTTTCGCGCGAGTTCGATGTTCTTCCGGTTCAACGATTCCTCGGTGGTGCAGCTNNNTCGACACGCGATGGCCGATTGGTAGAGGGAGATCAGATATTGGCGATAGATGGACAACCACTAGATTCGAATATCTCTCATGAGCAGGCAATCTCGATCCTCCAGAAGGCACGTGGTCTGGTCGAGTTGGTCGTAGCAAGAAGCACTCAAGACGTTGGGAGCTCTTTGCCGACGGATGAGTTGTCCGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1274#0 ACCGTCGGGGTCGACGAAGAAACAAAGAACACCCTCGCTTCCTGTTTCGCGCGAGTTCGA 60 consensus_1274#1 --CTTCCCCTTCAACGGGTATCCAT----CATCATCATTTGCCACCCTCTTCGTCCCTCC 54 * ** ** *** * ** ** * ** ** * ** consensus_1274#0 TGTTCTTCCGGTTCAACG--ATTCCTCGGTGGTGCAGCTTCCTCGACACGTTGGCGATTC 118 consensus_1274#1 CGCTCGTTTGATCCAGCACCAAGCACCAGCTCGCCAAATTTCATCCCGCGTTTCCTGTT- 113 * ** * * * ** * * * * * ** ** * * **** * ** consensus_1274#0 GCCATACGATTCGCGAAGGTGATCCATCTTCGAGACCGGATTCCCCTTCGAGACTCAATT 178 consensus_1274#1 -CTTTTCCTTTCCTTTCCTT--TCCCTCTTCCTCCTCCACCTCTCTTCTTTCATCCTCCC 170 * * * *** * *** ***** * ** * * * * consensus_1274#0 CGTCTTGCGGTAATGCTGGAACCCGTAAAAATGTCCGGGCGCCGATTGAAAATCTCGTCA 238 consensus_1274#1 CCTCTAACCGTCGGGGTCGACGAAGAAACAAAGAACACCCTCGCTNCCTGTTTCGCGCGA 230 * *** * ** * * ** * ** ** * * * * ** ** * consensus_1274#0 CGTTATTGGCCGGT-GATTCGTATATTTTTTGGAACGGAATGCACGGCATGATACGAAAC 297 consensus_1274#1 GTTCGATGTTCTTCCGGTTCAACGATTCCTCGG--TGGTGCAGCTNNNTCGACACG---- 284 * ** * * *** *** * ** ** ** *** consensus_1274#0 CGATGGCCGATTGGTAGAGGGAGATCAGATATTGGCGATAGATGGACAACCACTAGATTC 357 consensus_1274#1 CGATGGCCGATTGGTAGAGGGAGATCAGATATTGGCGATAGATGGACAACCACTAGATTC 344 ************************************************************ consensus_1274#0 GAATATCTCTCATGAGCAGGCAATCTCGATCCTCCAGAAGGCACGTGGTCTGGTCGAGTT 417 consensus_1274#1 GAATATCTCTCATGAGCAGGCAATCTCGATCCTCCAGAAGGCACGTGGTCTGGTCGAGTT 404 ************************************************************ consensus_1274#0 GGTCGTAGCAAGAAGCACTCAAGACGTTGGGAGCTCTTTGCCGACGGATGAGTTGTCCGG 477 consensus_1274#1 GGTCGTAGCAAGAAGCACTCAAGACGTTGGGAGCTCTTTGCCGACGGATGAGTTGTCCGG 464 ************************************************************ |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |